ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd18d14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1126 bits (568), Expect = 0.0 Identities = 598/604 (99%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 120051 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 119995 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119994 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 119935 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119934 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119875 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119874 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119815 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119814 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119755 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119754 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119695 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119694 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119635 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119634 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119575 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119574 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119515 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119514 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119455 Query: 601 tggt 604 |||| Sbjct: 119454 tggt 119451 Score = 1126 bits (568), Expect = 0.0 Identities = 598/604 (99%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 94843 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 94899 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94900 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 94959 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94960 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95019 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95020 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95079 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95080 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95139 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95140 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95199 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95200 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95259 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95260 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95319 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95320 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95379 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95380 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95439 Query: 601 tggt 604 |||| Sbjct: 95440 tggt 95443
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 962 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 906 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 905 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 846 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 786 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 726 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 666 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 665 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 606 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 546 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 486 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 426 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 366 Query: 601 tggt 604 |||| Sbjct: 365 tggt 362
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 44876 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 44820 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44819 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 44760 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44759 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 44700 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44699 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 44640 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44639 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 44580 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44579 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 44520 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44519 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 44460 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44459 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 44400 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44399 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 44340 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44339 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 44280 Query: 601 tggt 604 |||| Sbjct: 44279 tggt 44276 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 20242 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 20298 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20299 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 20358 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20359 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 20418 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20419 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 20478 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20479 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 20538 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20539 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 20598 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20599 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 20658 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20659 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 20718 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20719 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 20778 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20779 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 20838 Query: 601 tggt 604 |||| Sbjct: 20839 tggt 20842
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 1505 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 1449 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1448 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 1389 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 1329 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 1269 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 1209 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1208 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 1149 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1148 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 1089 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 1029 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 969 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 909 Query: 601 tggt 604 |||| Sbjct: 908 tggt 905
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 123715 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 123659 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123658 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 123599 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123598 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 123539 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123538 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 123479 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123478 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 123419 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123418 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 123359 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 123299 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123298 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 123239 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123238 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 123179 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123178 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 123119 Query: 601 tggt 604 |||| Sbjct: 123118 tggt 123115 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 99122 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 99178 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99179 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 99238 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99239 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 99298 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99299 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 99358 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99359 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 99418 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99419 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 99478 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99479 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 99538 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99539 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 99598 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99599 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 99658 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99659 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 99718 Query: 601 tggt 604 |||| Sbjct: 99719 tggt 99722
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 124432 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 124376 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 124375 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 124316 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124315 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 124256 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124255 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 124196 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124195 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 124136 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 124135 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 124076 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124075 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 124016 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124015 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 123956 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123955 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 123896 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123895 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 123836 Query: 601 tggt 604 |||| Sbjct: 123835 tggt 123832 Score = 1118 bits (564), Expect = 0.0 Identities = 597/604 (98%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 99799 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 99855 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99856 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 99915 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99916 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 99975 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99976 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 100035 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100036 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 100095 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 100096 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 100155 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100156 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 100215 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100216 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 100275 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100276 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 100335 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100336 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 100395 Query: 601 tggt 604 |||| Sbjct: 100396 tggt 100399
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118802 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 118743 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118742 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 118683 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118682 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 118623 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118622 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 118563 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118562 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 118503 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118502 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 118443 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118442 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 118383 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118382 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 118323 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118322 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 118263 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 118262 tgagccggcgactcataggcagtggcttggt 118232
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119827 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119826 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119767 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119467 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119407 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119347 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 119346 tgagccggcgactcataggcagtggcttggt 119316 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95329 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95389 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95689 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95749 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95750 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95809 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 95810 tgagccggcgactcataggcagtggcttggt 95840
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119827 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119826 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119767 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119707 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119647 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119587 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119527 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119467 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119407 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119406 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119347 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 119346 tgagccggcgactcataggcagtggcttggt 119316 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95329 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95389 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95449 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95509 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95510 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95569 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95629 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95689 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95749 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95750 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95809 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 95810 tgagccggcgactcataggcagtggcttggt 95840
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119835 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119776 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119775 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119716 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119715 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119656 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119655 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119596 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119595 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119536 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119535 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119476 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119475 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119416 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119356 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119296 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 119295 tgagccggcgactcataggcagtggcttggt 119265 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95215 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95274 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95275 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95334 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95335 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95394 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95454 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95455 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95514 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95515 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95574 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95575 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95634 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95635 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95694 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95695 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95754 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 95755 tgagccggcgactcataggcagtggcttggt 95785
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507848 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 31507907 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31507908 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 31507967 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507968 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31508027 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508028 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31508087 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508088 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31508147 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508148 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31508207 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508208 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 31508267 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508268 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 31508327 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508328 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 31508387 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 31508388 tgagccggcgactcataggcagtggcttggt 31508418
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84748 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 84689 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84688 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 84629 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84628 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 84569 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84568 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 84509 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84508 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 84449 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84448 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 84389 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84388 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 84329 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84328 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 84269 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84268 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 84209 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 84208 tgagccggcgactcataggcagtggcttggt 84178
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119855 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119796 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119795 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119736 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119676 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119616 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119615 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119556 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119555 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119496 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119436 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119376 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119375 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119316 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 119315 tgagccggcgactcataggcagtggcttggt 119285 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95263 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95322 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95323 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95382 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95442 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95502 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95503 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95562 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95563 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95622 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95623 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95682 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95683 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95742 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95743 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95802 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 95803 tgagccggcgactcataggcagtggcttggt 95833
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122312 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 122371 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122372 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 122431 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122432 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 122491 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122492 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 122551 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122552 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 122611 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122612 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 122671 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122672 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 122731 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122732 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 122791 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122792 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 122851 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 122852 tgagccggcgactcataggcagtggcttggt 122882 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14037 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 14096 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14097 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 14156 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14157 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 14216 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14217 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 14276 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14277 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 14336 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 14337 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 14396 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14397 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 14456 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14457 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 14516 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14517 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 14576 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 14577 tgagccggcgactcataggcagtggcttggt 14607
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58574 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 58515 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58514 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 58455 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58454 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 58395 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58394 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 58335 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58334 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 58275 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58274 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 58215 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58214 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 58155 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58154 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 58095 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58094 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 58035 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 58034 tgagccggcgactcataggcagtggcttggt 58004
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268197 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9268256 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268257 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9268316 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268317 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9268376 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268377 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9268436 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268437 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9268496 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268497 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9268556 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268557 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9268616 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268617 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9268676 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268677 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9268736 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 9268737 tgagccggcgactcataggcagtggcttggt 9268767 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227697 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9227756 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227757 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9227816 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227817 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9227876 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227877 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9227936 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227937 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9227996 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9228056 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228057 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9228116 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228117 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9228176 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228177 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9228236 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 9228237 tgagccggcgactcataggcagtggcttggt 9228267 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164286 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9164345 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164346 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9164405 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164406 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9164465 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164466 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9164525 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164526 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9164585 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164586 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9164645 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164646 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9164705 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164706 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9164765 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164766 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9164825 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 9164826 tgagccggcgactcataggcagtggcttggt 9164856 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056111 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9056170 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056171 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9056230 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056231 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9056290 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056291 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9056350 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056351 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9056410 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 9056411 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 9056470 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056471 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9056530 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056531 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9056590 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056591 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9056650 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 9056651 tgagccggcgactcataggcagtggcttggt 9056681 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 495 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938182 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19938241 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938242 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19938301 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938302 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19938361 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938362 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19938421 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938422 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19938481 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938482 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19938541 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938542 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 19938601 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938602 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 19938661 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938662 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 19938721 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 19938722 tgagccggcgactcataggcagtggcttggt 19938752 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277249 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10277190 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10277189 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10277130 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277129 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10277070 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277069 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10277010 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277009 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10276950 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276949 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10276890 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276889 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10276830 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276829 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10276770 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276769 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10276710 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 10276709 tgagccggcgactcataggcagtggcttggt 10276679 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387049 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10387108 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10387168 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10387228 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10387288 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10387348 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10387408 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10387468 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10387469 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10387528 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387529 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10387588 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 10387589 tgagccggcgactcataggcagtggcttggt 10387619 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 453 agtaccgtgagggaaaggtgaaaagaacccc 483 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 ttgtgctgctaggcgaagcggttgagtgc 306 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598364 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 31598423 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598424 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 31598483 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598484 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 31598543 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598544 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 31598603 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598604 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 31598663 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598664 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 31598723 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 31598783 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598784 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 31598843 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598844 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 31598903 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 31598904 tgagccggcgactcataggcagtggcttggt 31598934
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525680 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 33525739 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525740 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 33525799 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525800 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 33525859 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525860 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 33525919 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525920 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 33525979 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525980 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 33526039 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526040 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 33526099 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526100 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 33526159 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526160 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 33526219 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 33526220 tgagccggcgactcataggcagtggcttggt 33526250 Score = 278 bits (140), Expect = 2e-71 Identities = 146/148 (98%) Strand = Plus / Minus Query: 457 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 516 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 517 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 576 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 577 gccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggt 16677954 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 471 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 530 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 531 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 580 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 502 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 35 agggcgtagcaagcgacgaaatgcttc 61 ||||| ||||||||||||||||||||| Sbjct: 19455170 agggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47861 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 47802 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47801 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 47742 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47741 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 47682 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47681 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 47622 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47621 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 47562 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47561 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 47502 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47501 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 47442 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47441 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 47382 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47381 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 47322 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 47321 tgagccggcgactcataggcagtggcttggt 47291
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70877 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 70936 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 70937 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 70996 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70997 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 71056 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71057 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 71116 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71117 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 71176 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71177 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 71236 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71237 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 71296 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71297 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 71356 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71357 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 71416 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 71417 tgagccggcgactcataggcagtggcttggt 71447 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 348 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 349 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 408 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 468 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 528 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 588 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 589 tgagccggcgactcataggcagtggcttggt 619
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 105 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 165 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 225 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 285 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 345 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 346 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 405 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 465 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 525 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 585 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 586 tgagccggcgactcataggcagtggcttggt 616
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949458 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19949517 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949518 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19949577 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949578 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 19949637 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949638 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 19949697 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949698 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 19949757 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949758 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 19949817 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949818 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 19949877 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949878 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 19949937 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949938 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 19949997 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 19949998 tgagccggcgactcataggcagtggcttggt 19950028 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283288 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10283229 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10283228 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10283169 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283168 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10283109 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283108 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10283049 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283048 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10282989 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282988 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10282929 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282928 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10282869 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282868 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10282809 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282808 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10282749 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 10282748 tgagccggcgactcataggcagtggcttggt 10282718 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393088 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 10393147 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393148 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 10393207 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393208 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 10393267 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393268 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 10393327 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393328 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 10393387 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393388 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 10393447 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393448 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 10393507 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10393508 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 10393567 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393568 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 10393627 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 10393628 tgagccggcgactcataggcagtggcttggt 10393658 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 278 ttgtgctgctaggcgaagcggttgagtgc 306 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119829 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119770 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119769 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119710 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 119650 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 119590 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119589 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 119530 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119529 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 119470 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119469 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 119410 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119409 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 119350 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119349 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 119290 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 119289 tgagccggcgactcataggcagtggcttggt 119259 Score = 1116 bits (563), Expect = 0.0 Identities = 569/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95210 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 95269 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95270 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 95329 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95330 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 95389 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 95449 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 95509 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95510 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 95569 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95570 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 95629 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 95689 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 95749 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 95750 tgagccggcgactcataggcagtggcttggt 95780
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140845 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 140904 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140905 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 140964 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140965 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 141024 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141025 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 141084 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141085 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 141144 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 141145 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgt 141204 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141205 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 141264 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141265 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 141324 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141325 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 141384 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 141385 tgagccggcgactcataggcagtggcttggt 141415
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93441 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93500 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93501 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 93560 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93561 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 93620 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93621 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 93680 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93681 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 93740 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93741 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 93800 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93801 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 93860 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 93861 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 93920 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93921 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 93980 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 93981 tgagccggcgactcataggcagtggcttggt 94011
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1108 bits (559), Expect = 0.0 Identities = 568/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27505 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 27564 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27565 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 27624 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27625 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 27684 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27685 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 27744 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27745 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 27804 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27805 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 27864 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27865 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 27924 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27925 gtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccg 27984 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27985 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 28044 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 28045 tgagccggcgactcataggcagtggcttggt 28075
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1100 bits (555), Expect = 0.0 Identities = 567/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242084 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 9242025 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9242024 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 9241965 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241964 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 9241905 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241904 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 9241845 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241844 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 9241785 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241784 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 9241725 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241724 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 9241665 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241664 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 9241605 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241604 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 9241545 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||| ||||||||||||||||||||||||| Sbjct: 9241544 tgagctggcgactcataggcagtggcttggt 9241514 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 160 actgaaacatcttagtagccagaggaaaagaaag 193 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1100 bits (555), Expect = 0.0 Identities = 567/571 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53297 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 53238 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 53237 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 53178 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53177 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 53118 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53117 gcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 53058 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53057 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 52998 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52997 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 52938 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52937 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 52878 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52877 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 52818 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52817 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 52758 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||| ||||||||||||||||||||||||| Sbjct: 52757 tgagctggcgactcataggcagtggcttggt 52727
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1100 bits (555), Expect = 0.0 Identities = 567/571 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 65 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 66 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 125 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 185 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 186 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtaca 245 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 305 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 306 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 365 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 425 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 485 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 486 tgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaa 545 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 546 tgagccggcgactcataggcagtggcttggt 576
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1065 bits (537), Expect = 0.0 Identities = 590/604 (97%), Gaps = 3/604 (0%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| | |||||||||||||||||||||||| Sbjct: 123655 cggtggatacctagg-cacccag-agacgaggaagaggcgtagcaagcgacgaaatgctt 123598 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123597 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 123538 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 123478 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 123418 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 123417 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 123358 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 123357 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 123299 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123298 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 123239 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123238 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 123179 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123178 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 123119 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123118 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 123059 Query: 601 tggt 604 |||| Sbjct: 123058 tggt 123055 Score = 1065 bits (537), Expect = 0.0 Identities = 590/604 (97%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| | |||||||||||||||||||||||| Sbjct: 99082 cggtggatacctagg-cacccag-agacgaggaagaggcgtagcaagcgacgaaatgctt 99139 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99140 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 99199 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99200 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 99259 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99260 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 99319 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 99320 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 99379 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 99380 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 99438 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99439 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 99498 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99499 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 99558 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99559 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 99618 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99619 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 99678 Query: 601 tggt 604 |||| Sbjct: 99679 tggt 99682
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1065 bits (537), Expect = 0.0 Identities = 590/604 (97%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| | |||||||||||||||||||||||| Sbjct: 5435 cggtggatacctagg-cacccag-agacgaggaagaggcgtagcaagcgacgaaatgctt 5492 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5493 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 5552 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5553 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 5612 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5613 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 5672 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5673 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 5732 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 5733 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 5791 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5792 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 5851 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5852 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 5911 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5912 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 5971 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5972 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 6031 Query: 601 tggt 604 |||| Sbjct: 6032 tggt 6035
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1065 bits (537), Expect = 0.0 Identities = 590/604 (97%), Gaps = 3/604 (0%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| | |||||||||||||||||||||||| Sbjct: 23 cggtggatacctagg-cacccag-agacgaggaagaggcgtagcaagcgacgaaatgctt 80 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 81 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 140 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 cctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 200 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 260 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 261 accgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggtt 320 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||| Sbjct: 321 gagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctct 379 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 439 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 499 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 559 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 619 Query: 601 tggt 604 |||| Sbjct: 620 tggt 623
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1027 bits (518), Expect = 0.0 Identities = 524/526 (99%) Strand = Plus / Plus Query: 79 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 138 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 139 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 199 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 259 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 319 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 378 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 379 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 439 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 499 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 559 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 526
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1011 bits (510), Expect = 0.0 Identities = 519/522 (99%) Strand = Plus / Plus Query: 83 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 142 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 263 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 323 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 382 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 383 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 443 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 503 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 563 ctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggt 522
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 961 bits (485), Expect = 0.0 Identities = 488/489 (99%) Strand = Plus / Plus Query: 116 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 176 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 236 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 296 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 355 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 356 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 416 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 476 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 536 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 596 tggcttggt 604 ||||||||| Sbjct: 481 tggcttggt 489
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 940 bits (474), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 139565 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 139509 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 139508 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 139449 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139448 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 139390 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139389 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139330 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139329 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 139270 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 139269 gagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctct 139210 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139209 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139150 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139149 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 139090 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 139089 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 139033 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139032 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 138973 Query: 601 tggt 604 |||| Sbjct: 138972 tggt 138969 Score = 940 bits (474), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 110380 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 110436 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 110437 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 110496 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110497 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 110555 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110556 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 110615 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110616 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 110675 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 110676 gagtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctct 110735 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110736 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110795 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110796 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 110855 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 110856 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 110912 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110913 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 110972 Query: 601 tggt 604 |||| Sbjct: 110973 tggt 110976
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 940 bits (474), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 127843 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 127787 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 127786 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 127727 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127726 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 127668 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127667 gaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaa 127608 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 127607 accgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtg 127548 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||| Sbjct: 127547 gagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctct 127488 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127487 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 127428 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127427 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 127368 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 127367 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 127311 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127310 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 127251 Query: 601 tggt 604 |||| Sbjct: 127250 tggt 127247 Score = 940 bits (474), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 107079 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 107135 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 107136 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 107195 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107196 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 107254 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107255 gaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaa 107314 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107315 accgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtg 107374 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||| Sbjct: 107375 gagtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctct 107434 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107435 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 107494 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107495 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 107554 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 107555 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 107611 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107612 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 107671 Query: 601 tggt 604 |||| Sbjct: 107672 tggt 107675
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 940 bits (474), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 134202 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 134146 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 134145 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 134086 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134085 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 134027 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134026 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 133967 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 133966 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 133907 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 133906 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 133847 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133846 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 133787 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133786 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 133727 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133726 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 133670 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133669 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 133610 Query: 601 tggt 604 |||| Sbjct: 133609 tggt 133606 Score = 940 bits (474), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 103769 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 103825 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 103826 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 103885 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103886 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 103944 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103945 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 104004 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104005 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 104064 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 104065 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 104124 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104125 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 104184 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104185 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 104244 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104245 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104301 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104302 aatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 104361 Query: 601 tggt 604 |||| Sbjct: 104362 tggt 104365
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 924 bits (466), Expect = 0.0 Identities = 574/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 142087 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 142031 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 142030 cggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactg 141971 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141970 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 141912 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141911 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 141852 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141851 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtt 141792 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 141791 gagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctct 141732 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141731 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaag 141672 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141671 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 141612 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 141611 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 141555 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141554 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 141495 Query: 601 tggt 604 |||| Sbjct: 141494 tggt 141491 Score = 924 bits (466), Expect = 0.0 Identities = 574/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 111570 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 111626 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 111627 cggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactg 111686 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111687 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 111745 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111746 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 111805 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111806 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtt 111865 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||| Sbjct: 111866 gagtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctct 111925 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111926 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaag 111985 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111986 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 112045 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 112046 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 112102 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112103 aatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 112162 Query: 601 tggt 604 |||| Sbjct: 112163 tggt 112166
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 914 bits (461), Expect = 0.0 Identities = 573/604 (94%), Gaps = 11/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 134960 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 134904 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 134903 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 134844 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134843 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 134785 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134784 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 134725 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 134724 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 134665 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 134664 gagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttct 134605 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134604 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 134545 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134544 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 134485 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 134484 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 134428 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134427 aa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 134372 Query: 601 tggt 604 |||| Sbjct: 134371 tggt 134368 Score = 914 bits (461), Expect = 0.0 Identities = 573/604 (94%), Gaps = 11/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 105322 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 105378 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 105379 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 105438 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105439 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 105497 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105498 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105557 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 105558 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 105617 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 105618 gagtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttct 105677 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105678 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 105737 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105738 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 105797 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 105798 ccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggag 105854 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105855 aa----atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 105910 Query: 601 tggt 604 |||| Sbjct: 105911 tggt 105914
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 910 bits (459), Expect = 0.0 Identities = 465/467 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 109 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 169 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 229 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 289 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 349 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 350 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 409 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 469 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 910 bits (459), Expect = 0.0 Identities = 573/604 (94%), Gaps = 9/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 136570 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 136514 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 136513 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactg 136454 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136453 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 136395 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136394 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136335 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136334 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 136275 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 136274 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 136215 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136214 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 136155 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136154 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 136095 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136094 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 136038 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136037 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135980 Query: 601 tggt 604 |||| Sbjct: 135979 tggt 135976 Score = 910 bits (459), Expect = 0.0 Identities = 573/604 (94%), Gaps = 9/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 105855 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 105911 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 105912 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactg 105971 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105972 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106030 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106031 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106090 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106091 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 106150 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 106151 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 106210 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106211 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106270 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106271 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106330 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106331 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106387 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106388 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106445 Query: 601 tggt 604 |||| Sbjct: 106446 tggt 106449
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 892 bits (450), Expect = 0.0 Identities = 571/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 132754 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 132698 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 132697 cggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactg 132638 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132637 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 132579 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132578 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 132519 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 132518 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagta 132459 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132458 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 132399 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132398 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 132339 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132338 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 132279 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132278 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 132222 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132221 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 132163 Query: 601 tggt 604 |||| Sbjct: 132162 tggt 132159 Score = 892 bits (450), Expect = 0.0 Identities = 571/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 104124 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 104180 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 104181 cggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactg 104240 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104241 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 104299 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104300 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 104359 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104360 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagta 104419 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104420 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 104479 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104480 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 104539 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104540 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 104599 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104600 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104656 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104657 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 104715 Query: 601 tggt 604 |||| Sbjct: 104716 tggt 104719
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 892 bits (450), Expect = 0.0 Identities = 571/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 132977 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 132921 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 132920 cggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactg 132861 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132860 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 132802 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132801 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 132742 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 132741 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 132682 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 132681 gagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctct 132622 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132621 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 132562 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132561 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 132502 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132501 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 132445 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132444 -ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 132386 Query: 601 tggt 604 |||| Sbjct: 132385 tggt 132382 Score = 892 bits (450), Expect = 0.0 Identities = 571/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 103787 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 103843 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 103844 cggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactg 103903 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103904 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 103962 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103963 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 104022 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 104023 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 104082 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 104083 gagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctct 104142 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104143 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 104202 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104203 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 104262 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104263 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104319 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104320 -ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 104378 Query: 601 tggt 604 |||| Sbjct: 104379 tggt 104382
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 892 bits (450), Expect = 0.0 Identities = 571/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 132747 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 132691 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 132690 cggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactg 132631 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132630 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 132572 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132571 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 132512 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 132511 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagta 132452 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132451 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 132392 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132391 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 132332 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 132331 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 132272 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132271 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 132215 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 132156 Query: 601 tggt 604 |||| Sbjct: 132155 tggt 132152 Score = 892 bits (450), Expect = 0.0 Identities = 571/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 104122 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 104178 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 104179 cggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactg 104238 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104239 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 104297 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104298 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 104357 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 104358 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagta 104417 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104418 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 104477 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104478 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 104537 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 104538 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 104597 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104598 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104654 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104655 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 104713 Query: 601 tggt 604 |||| Sbjct: 104714 tggt 104717
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 884 bits (446), Expect = 0.0 Identities = 570/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 131646 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 131590 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 131589 cggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactg 131530 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131529 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 131471 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131470 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 131411 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 131410 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagta 131351 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 131350 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 131291 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131290 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131231 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131230 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 131171 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131170 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 131114 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131113 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 131055 Query: 601 tggt 604 |||| Sbjct: 131054 tggt 131051 Score = 884 bits (446), Expect = 0.0 Identities = 570/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 102989 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 103045 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 103046 cggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactg 103105 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103106 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 103164 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103165 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 103224 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 103225 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagta 103284 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 103285 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 103344 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103345 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 103404 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 103405 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 103464 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 103465 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 103521 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103522 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 103580 Query: 601 tggt 604 |||| Sbjct: 103581 tggt 103584
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 884 bits (446), Expect = 0.0 Identities = 570/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 133938 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 133882 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 133881 cggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactg 133822 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133821 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 133763 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133762 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 133703 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| Sbjct: 133702 accgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtg 133643 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 133642 gagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctct 133583 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133582 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 133523 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 133522 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 133463 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133462 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 133406 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133405 -ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 133347 Query: 601 tggt 604 |||| Sbjct: 133346 tggt 133343 Score = 884 bits (446), Expect = 0.0 Identities = 570/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 104711 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 104767 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 104768 cggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactg 104827 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104828 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 104886 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104887 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 104946 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| Sbjct: 104947 accgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtg 105006 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 105007 gagtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctct 105066 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105067 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 105126 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105127 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 105186 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105187 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 105243 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105244 -ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 105302 Query: 601 tggt 604 |||| Sbjct: 105303 tggt 105306
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 876 bits (442), Expect = 0.0 Identities = 569/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 140339 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 140283 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 140282 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 140223 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140222 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 140164 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140163 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 140104 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 140103 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcg 140044 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 140043 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 139984 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139983 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139924 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139923 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 139864 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 139863 ccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag 139807 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139806 -acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 139748 Query: 601 tggt 604 |||| Sbjct: 139747 tggt 139744 Score = 876 bits (442), Expect = 0.0 Identities = 569/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 109721 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 109777 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 109778 cggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactg 109837 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109838 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 109896 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109897 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 109956 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 109957 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcg 110016 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 110017 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 110076 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110077 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110136 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110137 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 110196 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 110197 ccccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag 110253 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110254 -acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 110312 Query: 601 tggt 604 |||| Sbjct: 110313 tggt 110316
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 876 bits (442), Expect = 0.0 Identities = 569/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 20 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 76 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 77 cggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactg 136 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 195 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 255 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtg 315 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 316 gagtgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctct 375 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 435 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 436 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 495 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 496 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 552 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 -ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 611 Query: 601 tggt 604 |||| Sbjct: 612 tggt 615
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 876 bits (442), Expect = 0.0 Identities = 569/604 (94%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 86 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaacca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 505 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 561 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 620 Query: 601 tggt 604 |||| Sbjct: 621 tggt 624
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 136279 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 136223 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 136222 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 136163 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136162 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 136104 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136103 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136044 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136043 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135984 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135983 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 135924 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135923 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135864 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135863 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135804 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135803 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135747 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135746 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135689 Query: 600 ttggt 604 ||||| Sbjct: 135688 ttggt 135684 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 106351 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 106407 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 106408 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 106467 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106468 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106526 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106527 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106586 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106587 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106646 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106647 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 106706 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106707 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106766 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106767 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106826 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106827 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106883 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106884 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106941 Query: 600 ttggt 604 ||||| Sbjct: 106942 ttggt 106946
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 136917 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 136861 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 136860 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 136801 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136800 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 136742 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136741 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136682 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136681 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 136622 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 136621 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 136562 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136561 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 136502 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136501 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 136442 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 136441 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 136385 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136384 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 136327 Query: 600 ttggt 604 ||||| Sbjct: 136326 ttggt 136322 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 106640 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 106696 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 106697 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 106756 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106757 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106815 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106816 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106875 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106876 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106935 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 106936 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 106995 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106996 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 107055 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107056 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 107115 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 107116 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 107172 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107173 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 107230 Query: 600 ttggt 604 ||||| Sbjct: 107231 ttggt 107235
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 1545 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 1601 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 1602 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 1661 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1662 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 1720 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1721 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 1780 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1781 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 1840 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1841 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 1900 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1901 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 1960 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1961 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2020 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2021 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 2077 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2078 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 2135 Query: 600 ttggt 604 ||||| Sbjct: 2136 ttggt 2140
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 135525 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 135469 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 135468 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 135409 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135408 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135350 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135349 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135290 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135289 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135230 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135229 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135170 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135169 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135110 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135109 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135050 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135049 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 134993 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134992 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134935 Query: 600 ttggt 604 ||||| Sbjct: 134934 ttggt 134930 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 105511 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 105567 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 105568 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 105627 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105628 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 105686 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105687 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105746 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105747 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105806 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105807 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 105866 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105867 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 105926 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105927 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 105986 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 105987 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106043 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106044 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106101 Query: 600 ttggt 604 ||||| Sbjct: 106102 ttggt 106106
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 135660 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 135604 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 135603 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 135544 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135543 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135485 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135484 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135425 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135424 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135365 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135364 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135305 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135304 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135245 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135244 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135185 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135184 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135128 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135127 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135070 Query: 600 ttggt 604 ||||| Sbjct: 135069 ttggt 135065 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 105683 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 105739 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 105740 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 105799 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105800 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 105858 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105918 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105919 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105978 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105979 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 106038 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106039 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106098 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106099 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106158 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106159 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106215 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106216 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106273 Query: 600 ttggt 604 ||||| Sbjct: 106274 ttggt 106278
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 135658 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 135602 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 135601 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 135542 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135541 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135483 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135482 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135423 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135422 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135363 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135362 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135303 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135302 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135243 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135242 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135183 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135182 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135126 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135125 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135068 Query: 600 ttggt 604 ||||| Sbjct: 135067 ttggt 135063 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 105680 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 105736 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 105737 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 105796 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105797 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 105855 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105856 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105915 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105916 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105975 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105976 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 106035 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106036 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106095 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106096 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106155 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106156 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106212 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106270 Query: 600 ttggt 604 ||||| Sbjct: 106271 ttggt 106275
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 135570 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 135514 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 135513 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 135454 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135453 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135395 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135394 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135335 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135334 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135275 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135274 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135215 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135214 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135155 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135154 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135095 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135094 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135038 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135037 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 134980 Query: 600 ttggt 604 ||||| Sbjct: 134979 ttggt 134975 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 105558 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 105614 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 105615 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 105674 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105675 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 105733 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105734 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105793 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105794 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105853 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105854 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 105913 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105914 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 105973 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105974 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106033 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106034 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106090 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106091 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106148 Query: 600 ttggt 604 ||||| Sbjct: 106149 ttggt 106153
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 136277 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 136221 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 136220 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 136161 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 136102 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136101 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 136042 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136041 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135982 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135981 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 135922 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135921 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135862 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135861 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135802 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135801 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135745 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135744 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135687 Query: 600 ttggt 604 ||||| Sbjct: 135686 ttggt 135682 Score = 864 bits (436), Expect = 0.0 Identities = 569/605 (94%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 106349 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 106405 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 106406 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 106465 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106524 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106525 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106584 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106585 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106644 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106645 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 106704 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106705 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106764 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106765 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106824 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106825 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106881 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106882 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106939 Query: 600 ttggt 604 ||||| Sbjct: 106940 ttggt 106944
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 860 bits (434), Expect = 0.0 Identities = 567/604 (93%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 106026 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 106082 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 106083 cggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 106142 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106143 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106201 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106202 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106261 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106262 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 106321 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 106322 gagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 106381 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106382 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106441 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 106442 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 106501 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106502 ccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag 106558 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106559 -acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106617 Query: 601 tggt 604 |||| Sbjct: 106618 tggt 106621 Score = 811 bits (409), Expect = 0.0 Identities = 566/607 (93%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 135883 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 135827 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 135826 cggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 135767 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135766 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135708 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135707 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135648 Query: 241 accgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggt 299 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 135647 accgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagt 135588 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ct 358 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| | | Sbjct: 135587 ggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgccc 135528 Query: 359 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgc 417 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135527 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgc 135468 Query: 418 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 477 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 135467 aaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaag 135408 Query: 478 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 537 |||||||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| Sbjct: 135407 aacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggag 135351 Query: 538 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 597 | | | | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135350 gag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 135292 Query: 598 gcttggt 604 ||||||| Sbjct: 135291 gcttggt 135285
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 860 bits (434), Expect = 0.0 Identities = 567/604 (93%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 136159 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 136103 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 136102 cggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 136043 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136042 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135984 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135983 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135924 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 135923 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 135864 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 135863 gagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 135804 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135803 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135744 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 135743 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 135684 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 135683 ccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag 135627 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135626 -acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135568 Query: 601 tggt 604 |||| Sbjct: 135567 tggt 135564 Score = 860 bits (434), Expect = 0.0 Identities = 567/604 (93%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 106248 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 106304 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||| |||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 106305 cggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 106364 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106365 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106423 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106424 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106483 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 106484 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 106543 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 106544 gagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 106603 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106604 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106663 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 106664 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 106723 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106724 ccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag 106780 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106781 -acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106839 Query: 601 tggt 604 |||| Sbjct: 106840 tggt 106843
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 856 bits (432), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 136008 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 135952 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||| Sbjct: 135951 cggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactg 135892 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135891 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135833 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135832 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135773 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135772 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135713 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135712 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 135653 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135652 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135593 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135592 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135533 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135532 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135476 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135475 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 135418 Query: 600 ttggt 604 ||||| Sbjct: 135417 ttggt 135413 Score = 856 bits (432), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 106130 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 106186 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||| Sbjct: 106187 cggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactg 106246 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106247 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 106305 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106306 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 106365 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106366 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 106425 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106426 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 106485 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106486 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 106545 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106546 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106605 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106606 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106662 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106663 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 106720 Query: 600 ttggt 604 ||||| Sbjct: 106721 ttggt 106725
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 856 bits (432), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 135537 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 135481 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 135480 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 135421 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135420 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 135362 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135361 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135302 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135301 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 135242 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 135241 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 135182 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135181 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 135122 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135121 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 135062 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 135061 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 135005 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135004 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc 134947 Query: 600 ttggt 604 ||||| Sbjct: 134946 ttggt 134942 Score = 856 bits (432), Expect = 0.0 Identities = 568/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 105525 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 105581 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 105582 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 105641 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105642 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 105700 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105701 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 105760 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 105761 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 105820 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||| ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 105821 tgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctc 105880 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105881 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 105940 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105941 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 106000 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 106001 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 106057 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106058 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggc 106115 Query: 600 ttggt 604 ||||| Sbjct: 106116 ttggt 106120
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 854 bits (431), Expect = 0.0 Identities = 568/605 (93%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 21 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 77 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 78 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 137 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138 c-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagcca 196 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagccta 239 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 197 gaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagccta 256 Query: 240 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt 299 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 257 aaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggt 316 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 317 gaagtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctc 376 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 436 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 437 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 496 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 497 cccccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 553 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 gcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 612 Query: 600 ttggt 604 ||||| Sbjct: 613 ttggt 617
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 844 bits (426), Expect = 0.0 Identities = 565/604 (93%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||| || ||||||||||||| Sbjct: 131770 cggtggatacctagg-cacccag-agacgagg-aagggcgtattaatcgacgaaatgctt 131714 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| Sbjct: 131713 cggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaactt 131654 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131653 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 131595 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131594 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 131535 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 131534 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtg 131475 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131474 gagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctct 131415 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131414 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131355 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 131354 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 131295 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 131294 ccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggg 131238 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131237 gaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 131179 Query: 601 tggt 604 |||| Sbjct: 131178 tggt 131175 Score = 844 bits (426), Expect = 0.0 Identities = 565/604 (93%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||| || ||||||||||||| Sbjct: 101675 cggtggatacctagg-cacccag-agacgagg-aagggcgtattaatcgacgaaatgctt 101731 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| Sbjct: 101732 cggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaactt 101791 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101792 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 101850 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101851 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 101910 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 101911 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtg 101970 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 101971 gagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctct 102030 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102031 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 102090 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 102091 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 102150 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 102151 ccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggg 102207 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102208 gaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 102266 Query: 601 tggt 604 |||| Sbjct: 102267 tggt 102270
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 844 bits (426), Expect = 0.0 Identities = 564/604 (93%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 22 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 78 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| ||||| Sbjct: 79 cggggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactg 138 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 c-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 197 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 198 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 257 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||| Sbjct: 258 accgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggtt 317 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 318 gagtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctct 377 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 437 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 497 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 498 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 554 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 555 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcc 614 Query: 601 tggt 604 |||| Sbjct: 615 tggt 618
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 841 bits (424), Expect = 0.0 Identities = 566/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 139483 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 139427 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct: 139426 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactg 139367 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139366 c-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccg 139308 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139307 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139248 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 139247 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 139188 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 139187 aagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctct 139128 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139127 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139068 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139067 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 139008 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 539 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139007 ccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 138951 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138950 cccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 138893 Query: 600 ttggt 604 ||||| Sbjct: 138892 ttggt 138888 Score = 841 bits (424), Expect = 0.0 Identities = 566/605 (93%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 109614 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 109670 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct: 109671 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactg 109730 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109731 c-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccg 109789 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109790 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 109849 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 109850 accgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtg 109909 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 109910 aagtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctct 109969 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109970 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110029 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110030 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 110089 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 539 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110090 ccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 110146 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110147 cccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 110204 Query: 600 ttggt 604 ||||| Sbjct: 110205 ttggt 110209
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 839 bits (423), Expect = 0.0 Identities = 539/572 (94%), Gaps = 8/572 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 85 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 86 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 144 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 204 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 264 Query: 274 agcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagt 332 ||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||||||| Sbjct: 265 agcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagt 323 Query: 333 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 392 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 324 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 383 Query: 393 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 443 Query: 453 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 512 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 444 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 503 Query: 513 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 572 | | |||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 504 g---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 558 Query: 573 atgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||| Sbjct: 559 atgagccggcgactcataggcagtggcttggt 590
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 837 bits (422), Expect = 0.0 Identities = 567/607 (93%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 139692 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 139636 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct: 139635 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactg 139576 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139575 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 139517 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139516 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 139457 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt- 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 139456 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 139397 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 139396 cgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctc 139337 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139336 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 139277 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 139276 ggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaa 139217 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 139216 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 139160 Query: 540 ga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 597 || | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139159 gactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 139100 Query: 598 gcttggt 604 ||||||| Sbjct: 139099 gcttggt 139093 Score = 837 bits (422), Expect = 0.0 Identities = 567/607 (93%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 109607 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 109663 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| Sbjct: 109664 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactg 109723 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109724 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 109782 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109783 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 109842 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 109843 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtg 109902 Query: 301 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 || ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 109903 cgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctc 109962 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109963 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 110022 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 110023 ggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaa 110082 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 110083 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 110139 Query: 540 ga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 597 || | | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110140 gactactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 110199 Query: 598 gcttggt 604 ||||||| Sbjct: 110200 gcttggt 110206
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 71 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 130 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 131 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 191 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 251 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 491 tagtga 496 |||||| Sbjct: 421 tagtga 426
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 817 bits (412), Expect = 0.0 Identities = 415/416 (99%) Strand = Plus / Plus Query: 189 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 249 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 309 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 368 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 369 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 429 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 489 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 416
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 815 bits (411), Expect = 0.0 Identities = 535/572 (93%), Gaps = 7/572 (1%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142828 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagat 142769 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 142768 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 142710 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142709 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 142650 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 142649 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 142590 Query: 274 agcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagt 332 ||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||| Sbjct: 142589 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 142530 Query: 333 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 392 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 142529 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 142470 Query: 393 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142469 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 142410 Query: 453 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 512 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 142409 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 142350 Query: 513 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 572 | | ||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 142349 g---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 142295 Query: 573 atgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||| Sbjct: 142294 atgagccggcgactcataggcagtggcttggt 142263 Score = 815 bits (411), Expect = 0.0 Identities = 535/572 (93%), Gaps = 7/572 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110500 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagat 110559 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 110560 tcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 110618 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110619 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 110678 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110679 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcataca 110738 Query: 274 agcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagt 332 ||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||| Sbjct: 110739 agcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagt 110798 Query: 333 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 392 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110799 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 110858 Query: 393 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110859 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 110918 Query: 453 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 512 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 110919 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 110978 Query: 513 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 572 | | ||||||||||||||||||| | || | |||||||||||||||||||||||| Sbjct: 110979 g---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaaga 111033 Query: 573 atgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||| Sbjct: 111034 atgagccggcgactcataggcagtggcttggt 111065
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 813 bits (410), Expect = 0.0 Identities = 533/571 (93%), Gaps = 6/571 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4282 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4341 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4342 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4400 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4401 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4460 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4461 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 4520 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||| Sbjct: 4521 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 4580 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4581 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 4640 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4641 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4700 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 4701 gtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg 4760 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 4761 ---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 4815 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 4816 tgagccggcgactcataggcagtggcttggt 4846
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 813 bits (410), Expect = 0.0 Identities = 533/571 (93%), Gaps = 6/571 (1%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 23643 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 23584 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 23583 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 23525 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23524 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 23465 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23464 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 23405 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||| Sbjct: 23404 agcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagta 23345 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23344 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 23285 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 23284 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 23225 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 23224 gtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg 23165 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 | |||||||||||||||||||| | | | ||||||||||||||||||||||||| Sbjct: 23164 ---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 23110 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 23109 tgagccggcgactcataggcagtggcttggt 23079
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 813 bits (410), Expect = 0.0 Identities = 413/414 (99%) Strand = Plus / Plus Query: 191 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 251 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 414
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 813 bits (410), Expect = 0.0 Identities = 413/414 (99%) Strand = Plus / Plus Query: 191 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 251 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 311 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 370 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 371 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 431 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 491 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 414
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 813 bits (410), Expect = 0.0 Identities = 534/571 (93%), Gaps = 7/571 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4610 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4611 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4669 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| ||||||||||||||||| || || || ||||||||||||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4969 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4970 gtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg 5029 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||| Sbjct: 5030 ---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 5083 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 5084 tgagccggcgactcataggcagtggcttggt 5114
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 813 bits (410), Expect = 0.0 Identities = 534/571 (93%), Gaps = 7/571 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 4610 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 4611 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 4669 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4670 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 4729 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4730 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 4789 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| ||||||||||||||||| || || || ||||||||||||| ||||||||||| Sbjct: 4790 agcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagta 4849 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 4850 gccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgt 4909 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4910 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 4969 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4970 gtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg 5029 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||| Sbjct: 5030 ---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaa 5083 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||| Sbjct: 5084 tgagccggcgactcataggcagtggcttggt 5114
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 811 bits (409), Expect = 0.0 Identities = 562/606 (92%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||| | |||||||||||||||| Sbjct: 86283 cggtggatacctagg-cacccag-agacgagg-aagggcgtggtaagcgacgaaatgctt 86339 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| ||||| Sbjct: 86340 cggggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactg 86399 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86400 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 86458 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86459 gaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaa 86518 Query: 241 accgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcgg 298 ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| Sbjct: 86519 accgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcgg 86578 Query: 299 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 358 |||||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||| Sbjct: 86579 ttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgct 86638 Query: 359 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 418 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86639 ctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 86698 Query: 419 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86699 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 86758 Query: 479 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 86759 acccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 86815 Query: 539 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 598 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 86816 aaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 86875 Query: 599 cttggt 604 |||||| Sbjct: 86876 cttggt 86881
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 811 bits (409), Expect = 0.0 Identities = 412/413 (99%) Strand = Plus / Plus Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 413
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 811 bits (409), Expect = 0.0 Identities = 412/413 (99%) Strand = Plus / Plus Query: 192 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 252 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 312 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 371 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 372 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 432 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 492 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 416
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 811 bits (409), Expect = 0.0 Identities = 481/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Minus Query: 36 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130482 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 130423 Query: 96 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 155 || ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||| Sbjct: 130422 ccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacctg 130364 Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130363 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 130304 Query: 216 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 275 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130303 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 130244 Query: 276 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 335 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 130243 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 130184 Query: 336 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130183 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 130124 Query: 396 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 455 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130123 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 130064 Query: 456 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 515 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 130063 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 130006 Query: 516 ctgagctcccaagcagtgggagg 538 | |||||||||||||||||||| Sbjct: 130005 -taagctcccaagcagtgggagg 129984 Score = 811 bits (409), Expect = 0.0 Identities = 481/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 36 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101974 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 102033 Query: 96 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 155 || ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||||| Sbjct: 102034 ccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacctg 102092 Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102093 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 102152 Query: 216 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 275 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 102153 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 102212 Query: 276 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 335 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 102213 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 102272 Query: 336 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102273 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 102332 Query: 396 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 455 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102333 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 102392 Query: 456 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 515 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 102393 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 102450 Query: 516 ctgagctcccaagcagtgggagg 538 | |||||||||||||||||||| Sbjct: 102451 -taagctcccaagcagtgggagg 102472 Score = 103 bits (52), Expect = 7e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggt 129914 Score = 103 bits (52), Expect = 7e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggt 102542
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 811 bits (409), Expect = 0.0 Identities = 562/606 (92%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||| | |||||||||||||||| Sbjct: 88369 cggtggatacctagg-cacccag-agacgagg-aagggcgtggtaagcgacgaaatgctt 88425 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||| Sbjct: 88426 cggggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactg 88485 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 88486 c-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagcca 88544 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88545 gaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 88604 Query: 241 accgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcgg 298 |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 88605 accgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcgg 88664 Query: 299 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 358 |||||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||| Sbjct: 88665 ttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgct 88724 Query: 359 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 418 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88725 ctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 88784 Query: 419 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88785 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 88844 Query: 479 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 88845 acccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 88901 Query: 539 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 598 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 88902 aaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtgg 88961 Query: 599 cttggt 604 |||||| Sbjct: 88962 cttggt 88967
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 807 bits (407), Expect = 0.0 Identities = 410/411 (99%) Strand = Plus / Plus Query: 194 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 254 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 314 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 373 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 374 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 434 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 494 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 554 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 411
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 805 bits (406), Expect = 0.0 Identities = 566/607 (93%), Gaps = 13/607 (2%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || | ||||||||||| Sbjct: 1788 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatc-acgaaatgctt 1843 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 1844 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 1903 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1904 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagcca 1962 Query: 181 gaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagccta 239 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1963 gaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagccta 2022 Query: 240 aaccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-g 297 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2023 aaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcag 2082 Query: 298 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 357 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2083 cccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgc 2142 Query: 358 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2143 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 2202 Query: 418 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 477 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2203 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaag 2262 Query: 478 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 537 |||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 2263 aacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggag 2319 Query: 538 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 597 | | || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 2377 Query: 598 gcttggt 604 ||||||| Sbjct: 2378 gcttggt 2384
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 803 bits (405), Expect = 0.0 Identities = 561/605 (92%), Gaps = 11/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||| || ||||||||||||| Sbjct: 517 cggtggatacctagg-cacccag-agacgagg-aagggcgtattaatcgacgaaatgctt 573 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| Sbjct: 574 cggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaactt 633 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 692 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 752 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 753 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtg 812 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 813 gagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctct 872 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 932 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaa 479 ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 933 gctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaa 992 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 993 cccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagga 1049 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 gacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 1106 Query: 600 ttggt 604 ||||| Sbjct: 1107 ttggt 1111
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 801 bits (404), Expect = 0.0 Identities = 509/538 (94%), Gaps = 7/538 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 86 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaacca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 505 ccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 801 bits (404), Expect = 0.0 Identities = 509/538 (94%), Gaps = 7/538 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 86 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaacca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 505 ccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggt 636
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 799 bits (403), Expect = 0.0 Identities = 481/505 (95%), Gaps = 4/505 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46303 aagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 46362 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| Sbjct: 46363 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacc 46421 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46422 tggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtagta 46481 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46482 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataca 46541 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||||| Sbjct: 46542 agcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccagta 46601 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46602 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 46661 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46662 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 46721 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 46722 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 46781 Query: 514 tgctgagctcccaagcagtgggagg 538 | ||||| |||||||||||||| Sbjct: 46782 ---taagctctcaagcagtgggagg 46803 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 46873
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 793 bits (400), Expect = 0.0 Identities = 508/538 (94%), Gaps = 7/538 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 86 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaacca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||| Sbjct: 325 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 505 ccccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 50/56 (89%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||| ||||||||||||||| ||||| || |||| ||||| ||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggcttggt 635
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 793 bits (400), Expect = 0.0 Identities = 508/538 (94%), Gaps = 7/538 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 86 cggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaacca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||| Sbjct: 325 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 505 ccccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 63.9 bits (32), Expect = 6e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggt 635
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 793 bits (400), Expect = 0.0 Identities = 508/538 (94%), Gaps = 7/538 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 86 cggggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactg 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaacca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||| Sbjct: 325 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 505 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 79.8 bits (40), Expect = 1e-11 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggt 635
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 791 bits (399), Expect = 0.0 Identities = 563/606 (92%), Gaps = 15/606 (2%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| || ||||||||||||| Sbjct: 121 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaatcgacgaaatgctt 177 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| Sbjct: 178 cggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactg 237 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agcc 179 | ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 238 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagcc 296 Query: 180 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 356 Query: 240 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cgg 298 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 357 aaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgc 415 Query: 299 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 358 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 416 ccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgct 475 Query: 359 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 418 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 476 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgca 535 Query: 419 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 478 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 536 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaaga 595 Query: 479 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 | ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 596 a-ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 651 Query: 539 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 598 | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 cca----gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 707 Query: 599 cttggt 604 |||||| Sbjct: 708 cttggt 713
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 789 bits (398), Expect = 0.0 Identities = 536/575 (93%), Gaps = 9/575 (1%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 131820 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 131761 Query: 94 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 152 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 131760 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 131702 Query: 153 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 212 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131701 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 131642 Query: 213 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 272 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131641 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 131582 Query: 273 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 330 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 131581 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 131522 Query: 331 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 390 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131521 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 131462 Query: 391 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131461 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 131402 Query: 451 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 510 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 131401 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 131342 Query: 511 ccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttga 569 ||| | |||||||||||||||||||| || | || ||||||||||||||||||||| Sbjct: 131341 ccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttga 131286 Query: 570 agaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||| Sbjct: 131285 agaatgagccggcgactcataggcagtggcttggt 131251 Score = 789 bits (398), Expect = 0.0 Identities = 536/575 (93%), Gaps = 9/575 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 103574 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 103633 Query: 94 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 152 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 103634 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 103692 Query: 153 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 212 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103693 ctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 103752 Query: 213 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 272 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103753 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 103812 Query: 273 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 330 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 103813 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 103872 Query: 331 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 390 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103873 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 103932 Query: 391 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103933 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 103992 Query: 451 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 510 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 103993 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 104052 Query: 511 ccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttga 569 ||| | |||||||||||||||||||| || | || ||||||||||||||||||||| Sbjct: 104053 ccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttga 104108 Query: 570 agaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||| Sbjct: 104109 agaatgagccggcgactcataggcagtggcttggt 104143
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 785 bits (396), Expect = 0.0 Identities = 557/604 (92%), Gaps = 10/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||| || ||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtattaatcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| Sbjct: 86 cggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaactt 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaac 504 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | Sbjct: 505 ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggag 561 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 | || |||||| ||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 562 acag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggct 618 Query: 601 tggt 604 |||| Sbjct: 619 tggt 622
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 777 bits (392), Expect = 0.0 Identities = 509/544 (93%), Gaps = 7/544 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 100 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 159 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||| Sbjct: 160 tcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacc 218 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 219 tggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagta 278 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 279 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaa 338 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||| Sbjct: 339 agcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagta 398 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 399 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 458 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 518 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 519 gtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 578 Query: 514 tgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaaga 572 | ||||||||||||| |||||| | || | |||||||||||||||||||||||| Sbjct: 579 ---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaaga 633 Query: 573 atga 576 |||| Sbjct: 634 atga 637
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 771 bits (389), Expect = 0.0 Identities = 519/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 52621 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 52562 Query: 108 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 167 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 52561 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 52503 Query: 168 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 227 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52502 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 52443 Query: 228 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 287 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 52442 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 52383 Query: 288 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 346 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 52382 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 52323 Query: 347 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 406 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52322 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 52263 Query: 407 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 466 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 52262 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 52203 Query: 467 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 526 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 52202 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 52146 Query: 527 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 52145 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 52088 Query: 587 cataggcagtggcttggt 604 ||||||||| |||||||| Sbjct: 52087 cataggcagcggcttggt 52070 Score = 771 bits (389), Expect = 0.0 Identities = 519/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 37207 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 37266 Query: 108 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 167 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 37267 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 37325 Query: 168 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 227 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 37326 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 37385 Query: 228 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 287 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 37386 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 37445 Query: 288 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 346 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 37446 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 37505 Query: 347 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 406 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 37506 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 37565 Query: 407 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 466 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 37566 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 37625 Query: 467 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 526 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 37626 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 37682 Query: 527 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 37683 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 37740 Query: 587 cataggcagtggcttggt 604 ||||||||| |||||||| Sbjct: 37741 cataggcagcggcttggt 37758
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 771 bits (389), Expect = 0.0 Identities = 519/558 (93%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 4135 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 4194 Query: 108 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 167 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 4195 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 4253 Query: 168 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 227 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4254 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 4313 Query: 228 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 287 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 4314 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 4373 Query: 288 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 346 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 4374 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 4433 Query: 347 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 406 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4434 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 4493 Query: 407 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 466 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 4494 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 4553 Query: 467 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 526 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 4554 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 4610 Query: 527 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 4611 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 4668 Query: 587 cataggcagtggcttggt 604 ||||||||| |||||||| Sbjct: 4669 cataggcagcggcttggt 4686
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 769 bits (388), Expect = 0.0 Identities = 531/577 (92%), Gaps = 10/577 (1%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 128395 aagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagat 128336 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 128335 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 128277 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 128276 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 128217 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 267 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128216 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 128157 Query: 268 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 327 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 128156 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 128097 Query: 328 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 387 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 128096 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 128037 Query: 388 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128036 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 127977 Query: 448 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 507 |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 127976 gaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatg 127917 Query: 508 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 567 |||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 127916 aaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgtt 127860 Query: 568 gaagaatgagccggcgactcataggcagtggcttggt 604 || ||||||||||||||||||||||||||||| |||| Sbjct: 127859 gaggaatgagccggcgactcataggcagtggcctggt 127823 Score = 769 bits (388), Expect = 0.0 Identities = 531/577 (92%), Gaps = 10/577 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 95052 aagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagat 95111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 95112 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 95170 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 95171 tggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagta 95230 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------ 267 |||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95231 gcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgataca 95290 Query: 268 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 327 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||| Sbjct: 95291 aatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagt 95350 Query: 328 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 387 ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||| Sbjct: 95351 ccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaa 95410 Query: 388 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 95470 Query: 448 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 507 |||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 95471 gaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatg 95530 Query: 508 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 567 |||||| | |||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 95531 aaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgtt 95587 Query: 568 gaagaatgagccggcgactcataggcagtggcttggt 604 || ||||||||||||||||||||||||||||| |||| Sbjct: 95588 gaggaatgagccggcgactcataggcagtggcctggt 95624
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 765 bits (386), Expect = 0.0 Identities = 555/604 (91%), Gaps = 8/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 116188 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 116132 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 116131 cggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactg 116072 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 116071 c-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagcca 116013 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 116012 gaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaa 115953 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||| Sbjct: 115952 accgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagtt 115894 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| Sbjct: 115893 gagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctct 115834 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 115833 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaag 115774 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115773 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 115714 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 115713 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 115657 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 115656 aattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 115597 Query: 601 tggt 604 |||| Sbjct: 115596 tggt 115593 Score = 765 bits (386), Expect = 0.0 Identities = 555/604 (91%), Gaps = 8/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 85932 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 85988 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||||||| |||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 85989 cggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactg 86048 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 86049 c-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagcca 86107 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 86108 gaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaa 86167 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||| Sbjct: 86168 accgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagtt 86226 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| Sbjct: 86227 gagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctct 86286 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 86287 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaag 86346 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86347 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 86406 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 86407 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 86463 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86464 aattgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 86523 Query: 601 tggt 604 |||| Sbjct: 86524 tggt 86527
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 763 bits (385), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 87 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 146 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 147 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 207 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 267 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 325 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 386 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 445 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 446 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 505 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 506 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 565 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 566 ttgaagaatgagccggcgactcataggcagtggcttgg 603 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 755 bits (381), Expect = 0.0 Identities = 525/571 (91%), Gaps = 4/571 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatggatccggagat 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||||| |||||| |||||||| ||| |||| |||||||||||| Sbjct: 112 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaacc 170 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 171 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 230 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | Sbjct: 231 gcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagta 290 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||| |||||||||||| ||||| | | ||||| ||||||| | ||||||||| Sbjct: 291 ggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagta 350 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 351 gccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccgt 410 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 411 gtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagta 470 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 471 gtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg 530 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 531 ---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaa 587 Query: 574 tgagccggcgactcataggcagtggcttggt 604 ||||||||||||| ||||| |||||| |||| Sbjct: 588 tgagccggcgacttataggtagtggcctggt 618
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 751 bits (379), Expect = 0.0 Identities = 460/484 (95%), Gaps = 6/484 (1%) Strand = Plus / Plus Query: 122 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 181 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 182 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 242 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 300 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 601 tggt 604 |||| Sbjct: 492 tggt 495
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 749 bits (378), Expect = 0.0 Identities = 552/604 (91%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 3911 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 3967 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 3968 cggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactg 4027 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| || || | |||||||||||| ||||||||||||||||||||||||||| Sbjct: 4028 c-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagcca 4086 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4087 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 4146 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 4147 accgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagtt 4206 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 4207 gagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttt 4266 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4267 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 4326 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4327 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 4386 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| | Sbjct: 4387 ccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggag 4443 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4444 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 4503 Query: 601 tggt 604 |||| Sbjct: 4504 tggt 4507
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 749 bits (378), Expect = 0.0 Identities = 526/572 (91%), Gaps = 5/572 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2095 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 2154 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 2155 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 2213 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2214 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 2273 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 2274 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 2333 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 2334 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 2393 Query: 334 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 392 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 2394 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 2453 Query: 393 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 2454 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 2513 Query: 453 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 512 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 2514 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 2573 Query: 513 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 572 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2574 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 2630 Query: 573 atgagccggcgactcataggcagtggcttggt 604 |||||||||||||| ||||| |||||| |||| Sbjct: 2631 atgagccggcgacttataggtagtggcctggt 2662
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 749 bits (378), Expect = 0.0 Identities = 552/604 (91%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 61 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||||||| |||||||||||||||||| ||||||| |||||||||||||| Sbjct: 62 cggggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactg 121 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 122 c-tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccg 180 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 181 gaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaa 240 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||| |||| | | |||| |||| ||||||||||||| ||| Sbjct: 241 accgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagtt 300 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| Sbjct: 301 gagtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctct 360 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 481 ccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag 537 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 538 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 597 Query: 601 tggt 604 |||| Sbjct: 598 tggt 601
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 749 bits (378), Expect = 0.0 Identities = 552/604 (91%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 21 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 77 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 78 cggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactg 137 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| || || | |||||||||||| ||||||||||||||||||||||||||| Sbjct: 138 c-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagcca 196 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 197 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 256 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 257 accgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagtt 316 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 317 gagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttt 376 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 436 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 496 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| | Sbjct: 497 ccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggag 553 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 554 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 613 Query: 601 tggt 604 |||| Sbjct: 614 tggt 617
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 749 bits (378), Expect = 0.0 Identities = 552/604 (91%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 151224 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 151168 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 151167 cggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactg 151108 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| || || | |||||||||||| ||||||||||||||||||||||||||| Sbjct: 151107 c-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagcca 151049 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 151048 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 150989 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 150988 accgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagtt 150929 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 150928 gagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttt 150869 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150868 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 150809 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150808 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 150749 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| | Sbjct: 150748 ccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggag 150692 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 150691 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 150632 Query: 601 tggt 604 |||| Sbjct: 150631 tggt 150628 Score = 749 bits (378), Expect = 0.0 Identities = 552/604 (91%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 117442 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 117498 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 117499 cggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactg 117558 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| || || | |||||||||||| ||||||||||||||||||||||||||| Sbjct: 117559 c-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagcca 117617 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 117618 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 117677 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 117678 accgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagtt 117737 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 117738 gagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttt 117797 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117798 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 117857 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117858 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 117917 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| | Sbjct: 117918 ccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggag 117974 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 117975 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 118034 Query: 601 tggt 604 |||| Sbjct: 118035 tggt 118038
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 749 bits (378), Expect = 0.0 Identities = 526/572 (91%), Gaps = 5/572 (0%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118098 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 118039 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 118038 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 117980 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117979 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 117920 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 117919 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 117860 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 117859 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 117800 Query: 334 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 392 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 117799 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 117740 Query: 393 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 117739 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 117680 Query: 453 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 512 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 117679 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 117620 Query: 513 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 572 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 117619 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 117563 Query: 573 atgagccggcgactcataggcagtggcttggt 604 |||||||||||||| ||||| |||||| |||| Sbjct: 117562 atgagccggcgacttataggtagtggcctggt 117531 Score = 749 bits (378), Expect = 0.0 Identities = 526/572 (91%), Gaps = 5/572 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 90004 aagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagat 90063 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||| Sbjct: 90064 tcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacc 90122 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagta 90182 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | Sbjct: 90183 gcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaata 90242 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 || ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| Sbjct: 90243 agtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagta 90302 Query: 334 gccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccg 392 ||||||||||| || | || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 90303 gccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccg 90362 Query: 393 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 452 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 90363 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagt 90422 Query: 453 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 512 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 90423 agtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 90482 Query: 513 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 572 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 90483 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 90539 Query: 573 atgagccggcgactcataggcagtggcttggt 604 |||||||||||||| ||||| |||||| |||| Sbjct: 90540 atgagccggcgacttataggtagtggcctggt 90571
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 749 bits (378), Expect = 0.0 Identities = 552/604 (91%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 21 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 77 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 78 cggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactg 137 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| || || | |||||||||||| ||||||||||||||||||||||||||| Sbjct: 138 c-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagcca 196 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 197 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 256 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| Sbjct: 257 accgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagtt 316 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 317 gagttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttt 376 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 436 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 496 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| | Sbjct: 497 ccccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggag 553 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 554 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 613 Query: 601 tggt 604 |||| Sbjct: 614 tggt 617
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 747 bits (377), Expect = 0.0 Identities = 555/608 (91%), Gaps = 11/608 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 22 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 78 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| |||||||||| || ||||||||||||||| ||||||| |||||||||||||| Sbjct: 79 cggggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactg 138 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 139 c-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccg 197 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 198 gaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaa 257 Query: 241 accgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagc 296 |||||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| Sbjct: 258 accgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagc 317 Query: 297 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 356 ||||||| | |||||| |||||| | ||||||||| |||||||||| || | |||||| Sbjct: 318 agttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatg 377 Query: 357 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 416 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 ctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 437 Query: 417 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 497 Query: 477 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 536 ||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| Sbjct: 498 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga 554 Query: 537 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 596 || ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 555 ggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 614 Query: 597 ggcttggt 604 ||| |||| Sbjct: 615 ggcctggt 622
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 737 bits (372), Expect = 0.0 Identities = 559/605 (92%), Gaps = 21/605 (3%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| |||||||||| |||||||||||||||| Sbjct: 712 cggtggatacctagg-cacccag-agacgagg-aagggcgtagtaagcgacgaaatgctt 656 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| Sbjct: 655 cggggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg 601 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||| |||||||||||||| || |||| ||| ||||||||||||||| Sbjct: 600 -ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagcca 549 Query: 181 gaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 gaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 489 Query: 240 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt 299 |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 488 aaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggt 429 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 428 ggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctc 369 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 309 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 308 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 249 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 248 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 192 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 gcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 133 Query: 600 ttggt 604 ||||| Sbjct: 132 ttggt 128
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 735 bits (371), Expect = 0.0 Identities = 552/605 (91%), Gaps = 8/605 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 146538 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 146482 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| Sbjct: 146481 cggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaacta 146422 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 146421 c-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagcca 146363 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 146362 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 146303 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| Sbjct: 146302 accgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagtt 146243 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctc 359 |||| | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 146242 gagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctc 146183 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 146182 caacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaa 146123 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 146122 ggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaa 146063 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 ||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 146062 cccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggagga 146006 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 146005 gaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 145946 Query: 600 ttggt 604 |||| Sbjct: 145945 ctggt 145941 Score = 735 bits (371), Expect = 0.0 Identities = 552/605 (91%), Gaps = 8/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 111924 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 111980 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| Sbjct: 111981 cggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaacta 112040 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 112041 c-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagcca 112099 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 112100 gaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaa 112159 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| Sbjct: 112160 accgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagtt 112219 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctc 359 |||| | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 112220 gagtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctc 112279 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 112280 caacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaa 112339 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 112340 ggctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaa 112399 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 ||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 112400 cccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggagga 112456 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112457 gaatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 112516 Query: 600 ttggt 604 |||| Sbjct: 112517 ctggt 112521
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 726 bits (366), Expect = 0.0 Identities = 505/544 (92%), Gaps = 8/544 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||| || ||||||||||||| Sbjct: 29 cggtggatacctagg-cacccag-agacgagg-aagggcgtattaatcgacgaaatgctt 85 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 ||||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| Sbjct: 86 cggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaactt 145 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 c-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagcca 204 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 264 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 265 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtg 324 Query: 301 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 360 |||||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 325 gagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctct 384 Query: 361 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 444 Query: 421 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 480 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 445 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa- 503 Query: 481 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | Sbjct: 504 ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggag 560 Query: 541 aaag 544 |||| Sbjct: 561 aaag 564
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 714 bits (360), Expect = 0.0 Identities = 431/451 (95%), Gaps = 4/451 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 48 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 107 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| Sbjct: 108 tcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacc 166 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 226 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 286 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| |||||||||||||||||||| || | | |||||||||||||| | ||||||||| Sbjct: 287 agcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccagta 346 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 347 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 406 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| Sbjct: 407 gtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaagta 464 Query: 454 gtaccgtgagggaaaggtgaaaagaaccccc 484 |||||||||||||| |||| ||||||||||| Sbjct: 465 gtaccgtgagggaagggtg-aaagaaccccc 494
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 80 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 139 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 140 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 200 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 260 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 320 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 379 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 380 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 440 ccgata 445 |||||| Sbjct: 361 ccgata 366
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 708 bits (357), Expect = 0.0 Identities = 421/441 (95%), Gaps = 1/441 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagat 87 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 88 tcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagacaacc 146 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 147 tggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagta 206 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 266 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 ||||| ||||||||||||||||||| || ||||||||||||||| ||||||||| Sbjct: 267 agcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccagta 326 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 327 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 386 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 446 Query: 454 gtaccgtgagggaaaggtgaa 474 |||||||||||||| |||||| Sbjct: 447 gtaccgtgagggaagggtgaa 467
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 696 bits (351), Expect = 0.0 Identities = 390/404 (96%), Gaps = 13/404 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 75083 Score = 345 bits (174), Expect = 1e-91 Identities = 204/210 (97%), Gaps = 3/210 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 75691 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 75635 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 75634 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 75575 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75574 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 75515 Query: 181 gaggaaaagaaagcaaaagcgattcccgta 210 |||||||||||||||||||||||||||||| Sbjct: 75514 gaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 696 bits (351), Expect = 0.0 Identities = 390/404 (96%), Gaps = 13/404 (3%) Strand = Plus / Plus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 382455 Score = 345 bits (174), Expect = 1e-91 Identities = 204/210 (97%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 381847 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 381903 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 381904 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 381963 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381964 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 382023 Query: 181 gaggaaaagaaagcaaaagcgattcccgta 210 |||||||||||||||||||||||||||||| Sbjct: 382024 gaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 696 bits (351), Expect = 0.0 Identities = 390/404 (96%), Gaps = 13/404 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 113174 Score = 345 bits (174), Expect = 1e-91 Identities = 204/210 (97%), Gaps = 3/210 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 113782 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 113726 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 113725 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 113666 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113665 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 113606 Query: 181 gaggaaaagaaagcaaaagcgattcccgta 210 |||||||||||||||||||||||||||||| Sbjct: 113605 gaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 696 bits (351), Expect = 0.0 Identities = 390/404 (96%), Gaps = 13/404 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 367856 Score = 696 bits (351), Expect = 0.0 Identities = 390/404 (96%), Gaps = 13/404 (3%) Strand = Plus / Minus Query: 206 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 266 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 386 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggt 184461 Score = 345 bits (174), Expect = 1e-91 Identities = 204/210 (97%), Gaps = 3/210 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 368464 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 368408 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 368407 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 368348 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368347 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 368288 Query: 181 gaggaaaagaaagcaaaagcgattcccgta 210 |||||||||||||||||||||||||||||| Sbjct: 368287 gaggaaaagaaagcaaaagcgattcccgta 368258 Score = 345 bits (174), Expect = 1e-91 Identities = 204/210 (97%), Gaps = 3/210 (1%) Strand = Plus / Minus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 185069 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 185013 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 185012 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 184953 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184952 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 184893 Query: 181 gaggaaaagaaagcaaaagcgattcccgta 210 |||||||||||||||||||||||||||||| Sbjct: 184892 gaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagta 176 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 674 bits (340), Expect = 0.0 Identities = 352/356 (98%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 123419 aagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagat 123360 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123359 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 123300 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123299 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 123240 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 123180 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123179 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 123120 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 389 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123119 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 422 bits (213), Expect = e-115 Identities = 216/217 (99%) Strand = Plus / Minus Query: 381 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtg 597 ||||||||||||||||||||| ||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtg 122604
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 674 bits (340), Expect = 0.0 Identities = 352/356 (98%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12825960 aagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagat 12825901 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12825900 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 12825841 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825840 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 12825781 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825780 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 12825721 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825720 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 12825661 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 389 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825660 gccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 422 bits (213), Expect = e-115 Identities = 216/217 (99%) Strand = Plus / Minus Query: 381 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 441 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 501 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 561 gcctgttgaagaatgagccggcgactcataggcagtg 597 ||||||||||||||||||||| ||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtg 12825145 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 326 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 385 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 658 bits (332), Expect = 0.0 Identities = 544/605 (89%), Gaps = 11/605 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||| |||| || ||||||||||||| Sbjct: 21 cggtggatacctagg-cacccag-agacgagg-aagggtgtagtaatcgacgaaatgctt 77 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||| |||||||| ||| || ||||||| | |||| Sbjct: 78 cggggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactg 137 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 | |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138 c-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagcca 196 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 240 |||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 197 gaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaa 256 Query: 241 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggt 299 |||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| | | Sbjct: 257 accgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagct 316 Query: 300 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 359 | | || |||||||||||||| |||||||||||| | |||||||||||| || |||| Sbjct: 317 taaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctc 376 Query: 360 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 419 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 377 tgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaa 436 Query: 420 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 479 |||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 437 ggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa 496 Query: 480 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 539 ||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| Sbjct: 497 -ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggagga 552 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | || | ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 553 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggc 610 Query: 600 ttggt 604 ||||| Sbjct: 611 ttggt 615
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 107 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 166 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 167 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 227 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 287 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 346 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 347 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 406 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 407 gaccaccttgcaaggctaaatactcctgggtg 438 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 557 bits (281), Expect = e-155 Identities = 284/285 (99%) Strand = Plus / Plus Query: 320 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 379 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 380 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 440 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 500 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 560 tgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggt 285
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 507 bits (256), Expect = e-140 Identities = 489/566 (86%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 143970 aagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagat 144029 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| Sbjct: 144030 tcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacc 144089 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 144090 cggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagta 144149 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144150 acggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgag 144209 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||||| Sbjct: 144210 ggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagta 144269 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 |||| ||| | |||||| | |||| |||| |||||||||||||||| |||||||| Sbjct: 144270 gccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgt 144329 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| | Sbjct: 144330 gtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagca 144389 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 144390 gtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 144449 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||| Sbjct: 144450 ---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaa 144506 Query: 574 tgagccggcgactcataggcagtggc 599 ||||||||||||| ||||| ||||| Sbjct: 144507 tgagccggcgacttgtaggcggtggc 144532 Score = 507 bits (256), Expect = e-140 Identities = 489/566 (86%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 88881 aagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagat 88822 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| Sbjct: 88821 tcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacc 88762 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| Sbjct: 88761 cggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagta 88702 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88701 acggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgag 88642 Query: 274 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 333 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||||| Sbjct: 88641 ggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagta 88582 Query: 334 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 393 |||| ||| | |||||| | |||| |||| |||||||||||||||| |||||||| Sbjct: 88581 gccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgt 88522 Query: 394 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 453 |||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| | Sbjct: 88521 gtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagca 88462 Query: 454 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 513 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 88461 gtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg 88402 Query: 514 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 573 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||| Sbjct: 88401 ---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaa 88345 Query: 574 tgagccggcgactcataggcagtggc 599 ||||||||||||| ||||| ||||| Sbjct: 88344 tgagccggcgacttgtaggcggtggc 88319
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 507 bits (256), Expect = e-140 Identities = 349/375 (93%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 2650 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 2709 Query: 94 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 152 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 2710 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 2768 Query: 153 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 212 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2769 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 2828 Query: 213 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 272 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2829 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 2888 Query: 273 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 330 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 2889 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 2948 Query: 331 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 390 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 2949 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 3007 Query: 391 cgtgtgaatcagcaa 405 ||||||||||||||| Sbjct: 3008 cgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 507 bits (256), Expect = e-140 Identities = 349/375 (93%), Gaps = 5/375 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 905 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggat 964 Query: 94 tcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 152 |||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| Sbjct: 965 tcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaac 1023 Query: 153 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 212 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 ttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 1083 Query: 213 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 272 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1084 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatac 1143 Query: 273 aagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtcca 330 ||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||| Sbjct: 1144 aagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtcca 1203 Query: 331 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 390 |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 1204 gtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcc 1262 Query: 391 cgtgtgaatcagcaa 405 ||||||||||||||| Sbjct: 1263 cgtgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 478 bits (241), Expect = e-131 Identities = 244/245 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 274 agcgt 278 ||||| Sbjct: 289 agcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 478 bits (241), Expect = e-131 Identities = 244/245 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 108 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 168 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 228 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 288 Query: 274 agcgt 278 ||||| Sbjct: 289 agcgt 293
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 458 bits (231), Expect = e-125 Identities = 234/235 (99%) Strand = Plus / Plus Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 490 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 549 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 235
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 452 bits (228), Expect = e-124 Identities = 308/332 (92%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 177082 aagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccggagat 177141 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| |||| Sbjct: 177142 tcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagagaacc 177200 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177201 aggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 177260 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 273 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 177261 gcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaataca 177320 Query: 274 agcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagt 332 ||||| |||| |||||||||||| | || ||| |||||||||||||| |||||||||| Sbjct: 177321 agcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagt 177380 Query: 333 agccgaaagcatcactagcttatgctctgacc 364 |||||||||||||||||||||| ||||||||| Sbjct: 177381 agccgaaagcatcactagcttaggctctgacc 177412 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 177460 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagc 178 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagc 178 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 436 bits (220), Expect = e-119 Identities = 324/358 (90%), Gaps = 3/358 (0%) Strand = Plus / Minus Query: 247 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 306 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 307 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 366 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 487 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 546 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 547 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggt 5930 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 46 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 105 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 106 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 165 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 166 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 225 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 226 atgggagcagcctaaaccgt 245 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 434 bits (219), Expect = e-118 Identities = 400/458 (87%), Gaps = 8/458 (1%) Strand = Plus / Minus Query: 140 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 199 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 200 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 259 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 260 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 315 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 375 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 376 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 435 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 436 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 495 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 496 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 555 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 556 cgcgtgcctgttgaagaatgagccggcgactcataggc 593 ||||||||||||||||||||||||||||||| |||||| Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggc 138661 Score = 434 bits (219), Expect = e-118 Identities = 400/458 (87%), Gaps = 8/458 (1%) Strand = Plus / Plus Query: 140 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 199 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 200 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 259 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 260 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 315 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 375 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 376 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 435 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 436 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 495 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 496 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 555 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 556 cgcgtgcctgttgaagaatgagccggcgactcataggc 593 ||||||||||||||||||||||||||||||| |||||| Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggc 83216
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 434 bits (219), Expect = e-118 Identities = 219/219 (100%) Strand = Plus / Plus Query: 386 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 446 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 506 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 566 ttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggt 219
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 323 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 382 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 383 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 443 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 502 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 503 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 562 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 563 ctgttgaagaatgagccggcgactcataggcagtggcttg 602 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 102 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 161 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 222 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 281 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 282 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 341 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 342 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 401 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 402 gcaaggaccaccttgcaag 420 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 429 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 488 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 489 ggtagtgaaatagaacgtgaaacc 512 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggt 3194 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 46 agcgacgaaatgcttcggggagttgaaaataagcatagatccggag 91 |||||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3739 agcgacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 199 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 258 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 259 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 317 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 318 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 377 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 378 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 437 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 438 gaccgata 445 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 365 bits (184), Expect = 1e-97 Identities = 218/228 (95%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 79719 aagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggat 79660 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||||| Sbjct: 79659 tcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacc 79601 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79600 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 79541 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 261 |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79540 gcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 357 bits (180), Expect = 3e-95 Identities = 210/216 (97%), Gaps = 3/216 (1%) Strand = Plus / Plus Query: 1 cggtggctacctagggcacccagtatacgaggnaagggcgtagcaagcgacgaaatgctt 60 |||||| |||||||| ||||||| | |||||| ||||||||||||||||||||||||||| Sbjct: 75787 cggtggatacctagg-cacccag-agacgagg-aagggcgtagcaagcgacgaaatgctt 75843 Query: 61 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75844 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 75903 Query: 121 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75904 cctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 75963 Query: 181 gaggaaaagaaagcaaaagcgattcccgtagtagcg 216 |||||||||||||||||||||||||||||||||||| Sbjct: 75964 gaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 ggcgaactgaaacatcttag 174 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 488 gggtagtgaaatagaacgtgaaaccgt 514 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 343 bits (173), Expect = 4e-91 Identities = 467/555 (84%), Gaps = 15/555 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 231 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 290 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 291 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 350 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 351 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 409 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 410 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 469 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 470 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 529 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 530 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 589 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 590 aggcagtggcttggt 604 | | |||||| |||| Sbjct: 595 aagtagtggcctggt 609
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 311 bits (157), Expect = 1e-81 Identities = 222/243 (91%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 602 ggt 604 ||| Sbjct: 615 ggt 617 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagat 98 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 99 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 158 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 159 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 218 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgt 245 | |||||||||||||||| ||||||||||||| Sbjct: 219 gtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 311 bits (157), Expect = 1e-81 Identities = 222/243 (91%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 602 ggt 604 ||| Sbjct: 628 ggt 630 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagat 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 112 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 171 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgt 245 | |||||||||||||||| ||||||||||||| Sbjct: 232 gtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 309 bits (156), Expect = 6e-81 Identities = 221/242 (91%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 603 gt 604 || Sbjct: 733 gt 734 Score = 252 bits (127), Expect = 1e-63 Identities = 190/211 (90%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||||| Sbjct: 156 aagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagat 215 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| ||||| || |||||||||||||| || | ||||||||||||||| Sbjct: 216 gcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacc 275 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 276 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 335 Query: 214 gcggcgagcgaaatgggagcagcctaaaccg 244 | |||||||||||||||| |||||||||||| Sbjct: 336 gtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 289 bits (146), Expect = 5e-75 Identities = 238/267 (89%), Gaps = 5/267 (1%) Strand = Plus / Plus Query: 338 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 397 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 398 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 457 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 458 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 517 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 518 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 577 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 578 ccggcgactcataggcagtggcttggt 604 ||||||||||||| | |||||| |||| Sbjct: 608 ccggcgactcataagtagtggcctggt 634 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 137 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 196 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 197 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 256 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 257 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 316 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 317 a 317 | Sbjct: 325 a 325
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 517 tgagctcccaagcagtgggaggggaaagtgatc 549 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 316 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 374 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 375 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 434 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 435 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 494 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 495 gaaatagaacgtgaaaccgtgctgagctcc 524 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 517 tgagctcccaagcagtgggaggggaaagtgatc 549 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 283 bits (143), Expect = 3e-73 Identities = 277/321 (86%), Gaps = 3/321 (0%) Strand = Plus / Plus Query: 284 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 343 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 344 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 403 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 404 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 463 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 523 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 524 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 583 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 584 actcataggcagtggcttggt 604 ||| |||||||||||| |||| Sbjct: 599 acttataggcagtggcgtggt 619 Score = 250 bits (126), Expect = 5e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 52 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 112 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 171 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 172 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 231 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 267 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 232 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 283 bits (143), Expect = 3e-73 Identities = 277/321 (86%), Gaps = 3/321 (0%) Strand = Plus / Minus Query: 284 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 343 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 344 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 403 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 404 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 463 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 523 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 524 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 583 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 584 actcataggcagtggcttggt 604 ||| |||||||||||| |||| Sbjct: 124666 acttataggcagtggcgtggt 124646 Score = 283 bits (143), Expect = 3e-73 Identities = 277/321 (86%), Gaps = 3/321 (0%) Strand = Plus / Plus Query: 284 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 343 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 344 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 403 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 404 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 463 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 464 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 523 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 524 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 583 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 584 actcataggcagtggcttggt 604 ||| |||||||||||| |||| Sbjct: 95200 acttataggcagtggcgtggt 95220 Score = 250 bits (126), Expect = 5e-63 Identities = 207/234 (88%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 125213 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 125154 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 125153 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 125094 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 125093 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 125034 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 267 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125033 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 250 bits (126), Expect = 5e-63 Identities = 207/234 (88%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 94653 aagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagac 94712 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||| Sbjct: 94713 ccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacc 94772 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 94773 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagta 94832 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 267 ||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94833 gcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 280 bits (141), Expect = 5e-72 Identities = 218/243 (89%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 602 ggt 604 ||| Sbjct: 574 ggt 576 Score = 182 bits (92), Expect = 9e-43 Identities = 184/211 (87%), Gaps = 4/211 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggaga 92 ||||||||| |||||||||||||||| |||| |||| || |||| || |||||||||| Sbjct: 8 aagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggaga 65 Query: 93 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 152 | ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| ||| Sbjct: 66 tccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataac 124 Query: 153 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 212 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcagt 184 Query: 213 agcggcgagcgaaatgggagcagcctaaacc 243 || |||||||||||||||| ||||||||||| Sbjct: 185 agtggcgagcgaaatgggaacagcctaaacc 215
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 612 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 98 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 99 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 158 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 159 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 218 Query: 214 gcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||| |||| ||| ||||||| Sbjct: 219 gcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 3/238 (1%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 115050 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggct 86938 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 115624 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 115565 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 115564 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 115505 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115504 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 115445 Query: 214 gcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||| |||| ||| ||||||| Sbjct: 115444 gcggcgagcgaaaggggaacagtctaaacc 115415 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 86364 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 86423 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 86424 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 86483 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86484 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 86543 Query: 214 gcggcgagcgaaatgggagcagcctaaacc 243 ||||||||||||| |||| ||| ||||||| Sbjct: 86544 gcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 278 bits (140), Expect = 2e-71 Identities = 146/148 (98%) Strand = Plus / Minus Query: 457 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 516 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 517 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 576 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 577 gccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggt 107903
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 264 bits (133), Expect = 3e-67 Identities = 217/242 (89%), Gaps = 6/242 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 603 gt 604 || Sbjct: 644 gt 645 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 242 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 264 bits (133), Expect = 3e-67 Identities = 217/242 (89%), Gaps = 6/242 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 603 gt 604 || Sbjct: 605 gt 606 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 203 ttcccgtagtagcggcgagcgaa 225 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434055 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19433996 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19433995 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19433936 Query: 154 tggcgaactgaaacat 169 |||||||||||||||| Sbjct: 19433935 tggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 537 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 578 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 455 taccgtgagggaaaggtgaaaagaacc 481 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51582 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 51523 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51522 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 51463 Query: 154 tggcgaactgaaacat 169 |||||||||||||||| Sbjct: 51462 tggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119546 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119487 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119486 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119427 Query: 154 tggcgaactgaaacat 169 |||||||||||||||| Sbjct: 119426 tggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6076 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 6135 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6136 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 6195 Query: 154 tggcgaactgaaacat 169 |||||||||||||||| Sbjct: 6196 tggcgaactgaaacat 6211
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 260 bits (131), Expect = 5e-66 Identities = 256/297 (86%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 488 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 547 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 548 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 4663 Score = 214 bits (108), Expect = 3e-52 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 4085 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 4144 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||| || |||| || |||||| ||||||||||| || | |||||| |||| Sbjct: 4145 tcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacc 4203 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 4204 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 4263 Query: 214 gcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||||||||| |||||||| Sbjct: 4264 gcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 260 bits (131), Expect = 5e-66 Identities = 256/297 (86%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 488 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 547 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 548 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 630 Score = 206 bits (104), Expect = 6e-50 Identities = 183/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||| || |||| || |||||| ||||||| ||| || | |||||| |||| Sbjct: 112 tcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaacc 170 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 214 gcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 260 bits (131), Expect = 5e-66 Identities = 256/297 (86%), Gaps = 3/297 (1%) Strand = Plus / Plus Query: 308 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 367 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 368 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 427 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 428 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 487 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 488 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 547 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 548 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 630 Score = 214 bits (108), Expect = 3e-52 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagat 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| ||| || |||| || |||||| ||||||||||| || | |||||| |||| Sbjct: 112 tcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacc 170 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 171 tggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagta 230 Query: 214 gcggcgagcgaaatgggagcagcctaaa 241 ||||||||||||||||||| |||||||| Sbjct: 231 gcggcgagcgaaatgggagaagcctaaa 258
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 258 bits (130), Expect = 2e-65 Identities = 133/134 (99%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 1655 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1656 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 1715 Query: 154 tggcgaactgaaac 167 |||||||||||||| Sbjct: 1716 tggcgaactgaaac 1729
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 250 bits (126), Expect = 5e-63 Identities = 218/248 (87%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 357 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 416 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 417 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 476 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 477 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 536 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 537 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 596 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 597 ggcttggt 604 ||| |||| Sbjct: 575 ggcctggt 582 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 150 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 210 agtagcggcgagcgaaatgggagcagcctaaacc 243 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcgg 63 |||||||||| ||||||||||| ||||||| Sbjct: 13 aagggcgtagtaagcgacgaaacgcttcgg 42
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 291 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 350 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 351 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 410 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 411 accttgcaaggctaaatactcctgggtgaccga 443 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| |||| Sbjct: 39 aagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtagat 98 Query: 94 tcccaaataggtcaacct 111 |||| |||||| |||||| Sbjct: 99 tcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| |||| Sbjct: 1805 aagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtagat 1864 Query: 94 tcccaaataggtcaacct 111 |||| |||||| |||||| Sbjct: 1865 tcccgaatagggcaacct 1882
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 236 bits (119), Expect = 7e-59 Identities = 214/245 (87%), Gaps = 3/245 (1%) Strand = Plus / Plus Query: 356 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 415 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 416 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 475 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 476 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 535 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 536 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 595 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 596 tggct 600 ||||| Sbjct: 617 tggct 621 Score = 184 bits (93), Expect = 2e-43 Identities = 182/209 (87%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||| |||||||||||| ||||| | | ||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatccggagat 111 Query: 94 tcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagacaac 152 |||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||||||||| Sbjct: 112 tcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagacaac 170 Query: 153 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 212 |||| ||||||||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 171 ctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctgagt 230 Query: 213 agcggcgagcgaaatgggagcagcctaaa 241 |||||||||||||||||||| |||||||| Sbjct: 231 agcggcgagcgaaatgggagaagcctaaa 259
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 310 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 369 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 370 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 429 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 430 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 489 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 490 gtagtgaaatagaacgtgaaa 510 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 9e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 111 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 112 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 171 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 172 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 231 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 232 gcagcctaaaccgtgaaaacggggttg 258 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggt 621
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 232 bits (117), Expect = 1e-57 Identities = 212/242 (87%), Gaps = 5/242 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 602 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 603 gt 604 || Sbjct: 611 gt 612 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 108 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 167 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 168 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 227 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 228 gggagcagcctaaaccg 244 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 226 bits (114), Expect = 7e-56 Identities = 213/243 (87%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 481 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 602 ggt 604 ||| Sbjct: 590 ggt 592 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 149 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 208 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 209 tagtagcggcgagcgaaatgggagcagcctaaac 242 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 224 bits (113), Expect = 3e-55 Identities = 211/243 (86%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 601 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 602 ggt 604 ||| Sbjct: 1021 ggt 1023 Score = 168 bits (85), Expect = 1e-38 Identities = 182/212 (85%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||| | || || ||| || | |||||||| Sbjct: 455 aagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaacccggagat 512 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||||| Sbjct: 513 tcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaacc 571 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 572 tggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttagta 631 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgt 245 | ||||||||||| |||| ||||||||||||| Sbjct: 632 gtggcgagcgaaacgggaacagcctaaaccgt 663
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 224 bits (113), Expect = 3e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Minus Query: 38 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 96 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 89827 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 89768 Query: 97 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 156 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 89767 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 89709 Query: 157 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 197 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89708 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 224 bits (113), Expect = 3e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 38 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 96 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 443 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 502 Query: 97 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 156 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 503 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 561 Query: 157 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 197 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 562 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 505 gtgaaa 510 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 ag 232 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 505 gtgaaa 510 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 agcagcctaa 240 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 543 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatggga 231 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 214 bits (108), Expect = 3e-52 Identities = 206/238 (86%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 487 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 546 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 547 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggt 619 Score = 186 bits (94), Expect = 6e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||||||||| || || ||||||| ||||| |||| Sbjct: 52 aagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatccgaagat 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| ||||| || ||| |||| |||| || | |||| ||||| |||| Sbjct: 112 tcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaacc 171 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 | | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 172 tagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagta 231 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 263 | ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 232 gtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccg 513 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 108 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 167 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 168 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 227 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 228 gggagcagcctaaacc 243 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 325 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 384 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 504 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 505 gtgaaa 510 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 52 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 110 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 111 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 170 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 171 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 230 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 231 ag 232 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 549 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 590 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 208 bits (105), Expect = 2e-50 Identities = 211/244 (86%), Gaps = 8/244 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 540 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 601 tggt 604 |||| Sbjct: 621 tggt 624 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 208 bits (105), Expect = 2e-50 Identities = 211/244 (86%), Gaps = 8/244 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 540 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 601 tggt 604 |||| Sbjct: 621 tggt 624 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 139 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 198 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 199 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 222 cgaaatgggagcagcctaaacc 243 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 540 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 598 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 206 bits (104), Expect = 6e-50 Identities = 200/232 (86%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||| || || ||| ||||||||| |||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatccgaagat 111 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| |||||| || ||| |||| ||| ||| | |||| ||||| |||| Sbjct: 112 tcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaacc 171 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 172 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 231 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 | ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 232 gtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 487 tgggtagtgaaatagaacgtgaaacc 512 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggt 619
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 482 cc 483 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 141 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 200 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 201 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 553 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggt 613 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 66 cgacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 487 tgggtagtgaaatagaacgtgaaacc 512 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 170 bits (86), Expect = 3e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| ||||||||||||||||||||||| || || ||| ||| ||||| |||| Sbjct: 1819 aagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatccgaagat 1878 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| ||||| || ||| |||| |||| || | |||| ||||| |||| Sbjct: 1879 tcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaacc 1938 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 1939 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 1998 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 263 | ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1999 gtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 198 bits (100), Expect = 1e-47 Identities = 209/238 (87%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 423 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 539 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 600 tt 601 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 222 cgaa 225 |||| Sbjct: 238 cgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 222 cgaaatgggagcagcctaaacc 243 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 218 cgagcgaaatgggagcagcctaaac 242 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 111 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 111 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 222 cgaaatgggagcagcctaaacc 243 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 641
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 423 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 539 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 600 tt 601 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 222 cgaa 225 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 151758 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 42445
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 423 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 539 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 540 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 600 tt 601 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 162 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 221 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 222 cgaa 225 |||| Sbjct: 238 cgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 111 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 218 cgagcgaaatgggagcagcctaaac 242 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 111 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 617
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 702
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 482 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 155605 Score = 196 bits (99), Expect = 6e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 482 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 540 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 541 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 78287 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 116 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 117 a 117 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 116 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 117 a 117 | Sbjct: 77725 a 77725
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 366 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 425 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 426 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 485 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 486 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 545 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 546 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 594 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||| | || |||||||| ||||||||||| || ||| ||||| ||||||||||| Sbjct: 31 aagggcgtggaaaccgacgaaacgcttcggggagctggaaacaagcaatgatccggagat 90 Query: 94 tcccaaataggtcaacct 111 |||| |||||| |||||| Sbjct: 91 tcccgaatagggcaacct 108
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 471 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 530 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 531 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 580 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 367 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 426 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 427 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 486 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 487 tgggtagtgaaatagaacgtgaaacc 512 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 190 bits (96), Expect = 4e-45 Identities = 198/232 (85%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| |||||||||||||||| |||||| || || ||| ||||||||| |||| Sbjct: 3086 aagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatccgaagat 3145 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| |||||| || ||| |||| ||| ||| |||| ||||| |||| Sbjct: 3146 tcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaacc 3205 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 | | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||| Sbjct: 3206 tagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagta 3265 Query: 214 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 265 | ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3266 gtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 89.7 bits (45), Expect = 1e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggt 3653
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 48 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 107 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 108 acct 111 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 366 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 425 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 426 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 485 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 486 gtgggtagtgaaatagaacgtgaaaccgt 514 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 559 gtgcctgttgaagaatgagccggcgactcatagg 592 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 541 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 542 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 586 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 111 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||| |||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 634
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggt 170888 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggt 122038 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||| |||||||| || ||||||| || || |||| ||||||||||| Sbjct: 171467 aagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagat 171408 Query: 94 tcccaaataggtcaacct 111 |||| |||||| |||||| Sbjct: 171407 tcccgaatagggcaacct 171390 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||| |||||||| || ||||||| || || |||| ||||||||||| Sbjct: 121459 aagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagat 121518 Query: 94 tcccaaataggtcaacct 111 |||| |||||| |||||| Sbjct: 121519 tcccgaatagggcaacct 121536
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 186 bits (94), Expect = 6e-44 Identities = 205/238 (86%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 542 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 543 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 797 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 243 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 538 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 144 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 203 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 204 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggt 629 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 ||||||||||||| |||||||| || ||||||| || || |||| ||||||||||| Sbjct: 50 aagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagat 109 Query: 94 tcccaaataggtcaacct 111 |||| |||||| |||||| Sbjct: 110 tcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 481 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 482 cccagtgggtagtgaaatagaacgtgaaaccgt 514 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 |||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggt 682
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 481 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 482 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 538 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 539 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 113 bits (57), Expect = 7e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 51 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 110 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 111 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 169 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 170 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 229 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 230 gagcagcctaaac 242 || |||||||||| Sbjct: 229 gaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgt 514 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 157 bits (79), Expect = 5e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 34 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 93 |||||||||| | |||||| | ||||||||||| || || |||| | |||||| |||| Sbjct: 39 aagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaagat 98 Query: 94 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 153 |||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||||| Sbjct: 99 tcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaacc 158 Query: 154 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 213 |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||||| Sbjct: 159 cggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagta 218 Query: 214 gcggcgagcgaaatgggagcagcctaaaccg 244 | ||||||||||| |||| ||| |||||||| Sbjct: 219 gtggcgagcgaaaagggatcagtctaaaccg 249 Score = 101 bits (51), Expect = 3e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggt 610
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 116 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 117 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 176 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 177 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 236 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 237 ctaaacc 243 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 158 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 217 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 218 cgagcgaaatgggagcagcctaaacc 243 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgact 586 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 483 ccagtgggtagtgaaatagaacgtgaaacc 512 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 57 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 116 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 117 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 176 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 177 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 236 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 237 ctaaacc 243 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 600 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 366 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 425 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 426 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 485 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 486 gtgggtagtgaaatagaacgtgaaaccgt 514 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 550 tctgaccgcgtgcctgttgaagaatgagccggcga 584 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 483 ccagt-gggtagtgaaatagaacgtgaaaccgt 514 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 143 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 202 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 203 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 244 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 604 ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggt 766
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 159 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 218 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 219 gagcgaaatgggagcagcctaaacc 243 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 363 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 483 ccagtgggtagtgaaatagaacgtgaaaccgtg 515 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 156 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 215 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 216 ggcgagcgaaatgggagcagcctaaacc 243 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 552 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 482 c 482 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 149 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 208 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 209 tagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 599 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 285 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 334 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 362 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 482 c 482 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 149 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 208 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 209 tagtagcggcgagcgaaatgggagcagcctaaaccg 244 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 592 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 605 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 285 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 334 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,102,359 Number of Sequences: 3902068 Number of extensions: 4102359 Number of successful extensions: 120930 Number of sequences better than 10.0: 26617 Number of HSP's better than 10.0 without gapping: 26445 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 76740 Number of HSP's gapped (non-prelim): 42234 length of query: 604 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 581 effective length of database: 17,143,297,704 effective search space: 9960255966024 effective search space used: 9960255966024 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
