ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111962.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
2dbj|AK111498.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 84 5e-13
5emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb... 84 5e-13
6dbj|AK121774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
7gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 44 0.47
8gb|AC008064.2| Homo sapiens BAC clone RP11-178E24 from 2, comple... 44 0.47
9gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, com... 42 1.9
10gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Can... 42 1.9
11gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Canc... 42 1.9
12gb|AC131987.10| Mus musculus chromosome 13, clone RP24-184L10, c... 42 1.9
13gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosom... 42 1.9
14ref|NM_120906.2| Arabidopsis thaliana unknown protein AT5G08230 ... 40 7.3
15ref|XM_508082.1| PREDICTED: Pan troglodytes similar to transform... 40 7.3
16gb|BT019266.1| Zea mays clone Contig939.F mRNA sequence 40 7.3
17ref|NM_013510.3| Mus musculus erythrocyte protein band 4.1-like ... 40 7.3
18ref|NM_001003815.2| Mus musculus erythrocyte protein band 4.1-li... 40 7.3
19ref|NM_001006664.2| Mus musculus erythrocyte protein band 4.1-li... 40 7.3
20gb|BC015736.1| Homo sapiens transforming, acidic coiled-coil con... 40 7.3
21gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complet... 40 7.3
22emb|AL163249.2|HS21C049 Homo sapiens chromosome 21 segment HS21C049 40 7.3
23emb|CR854992.5| Zebrafish DNA sequence from clone DKEYP-30C3 in ... 40 7.3
24emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on ch... 40 7.3
25emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chr... 40 7.3
26emb|Z99106.2|BSUB0003 Bacillus subtilis complete genome (section... 40 7.3
27gb|BC039311.1| Homo sapiens transforming, acidic coiled-coil con... 40 7.3
28emb|AL713712.1|HSM803082 Homo sapiens mRNA; cDNA DKFZp564B0278 (... 40 7.3
29emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BA... 40 7.3
30emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BA... 40 7.3
31gb|AC008611.6| Homo sapiens chromosome 5 clone CTB-133M7, comple... 40 7.3
32gb|AC092701.2| Homo sapiens chromosome 15, clone RP11-758M2, com... 40 7.3
33gb|AC015871.7| Homo sapiens chromosome 15, clone RP11-81A1, comp... 40 7.3
34dbj|AK075097.1| Homo sapiens cDNA FLJ90616 fis, clone PLACE10021... 40 7.3
35gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, comple... 40 7.3
36dbj|AK147272.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 7.3
37dbj|AK154704.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 7.3
38dbj|AK147611.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 7.3
39dbj|AK164141.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 7.3
40emb|BX511032.6| Zebrafish DNA sequence from clone CH211-114B16 i... 40 7.3
41gb|AF124730.2|AF124730 Homo sapiens chromosome 21 clone PAC N218... 40 7.3
42dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
43gb|AF220152.2|AF220152 Homo sapiens TACC2 mRNA, complete cds 40 7.3
44gb|AF528099.1| Homo sapiens transforming acidic coiled coil 2, l... 40 7.3
45gb|AF528098.1| Homo sapiens transforming acidic coiled coil 2, s... 40 7.3
46gb|AF095791.2|AF095791 Homo sapiens TACC2 protein (TACC2) mRNA, ... 40 7.3
47gb|AC127287.4| Mus musculus BAC clone RP23-345G7 from chromosome... 40 7.3
48gb|AF176646.1|AF176646 Homo sapiens anti zuai-1 mRNA, complete cds 40 7.3
49dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
50dbj|BS000171.1| Pan troglodytes chromosome 22 clone:PTB-086M04, ... 40 7.3
51dbj|BS000157.1| Pan troglodytes chromosome 22 clone:RP43-154K22,... 40 7.3
52emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chro... 40 7.3
53dbj|AK027066.1| Homo sapiens cDNA: FLJ23413 fis, clone HEP20672,... 40 7.3
54dbj|AK122251.1| Mus musculus mRNA for mKIAA0338 protein 40 7.3
55ref|NM_206862.1| Homo sapiens transforming, acidic coiled-coil c... 40 7.3
56ref|NM_206860.1| Homo sapiens transforming, acidic coiled-coil c... 40 7.3
57ref|NM_206861.1| Homo sapiens transforming, acidic coiled-coil c... 40 7.3
58ref|NM_006997.2| Homo sapiens transforming, acidic coiled-coil c... 40 7.3
59ref|NM_172090.1| Rattus norvegicus erythrocyte protein band 4.1-... 40 7.3
60emb|AL833304.1|HSM804617 Homo sapiens mRNA; cDNA DKFZp451N249 (f... 40 7.3
61dbj|AB019256.1| Rattus norvegicus mRNA for brain 4.1(S), complet... 40 7.3
62dbj|AB001488.1| Bacillus subtilis genome sequence, 148 kb sequen... 40 7.3 
>dbj|AK111962.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B06, full
           insert sequence
          Length = 1896

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                       
Query: 253 gcggattcgaggcctcggtttccgcaacgtcacgcggagccggattgtacttactacttg 312
           |||||||||||||| ||||| |||   || | || ||||||||| || || |||||| | 
Sbjct: 352 gcggattcgaggccgcggttcccgaggcgacccggggagccggactgcacctactacgtc 411

                                                                       
Query: 313 aagttcggaacttgccgcttcgggatgaagtgcaagttcaaccatccggcgcgaaagaag 372
           |||||||| |  |||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 412 aagttcgggagctgccgctttgggatgaagtgcaagttcaatcatccggcgaggaagaag 471

                           
Query: 373 aaaaataaggtgaaag 388
           || | || ||||||||
Sbjct: 472 aagagtagggtgaaag 487



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 1  atggcggacgccgacgcgaaggcccc 26
          ||||||||||||||||||| ||||||
Sbjct: 58 atggcggacgccgacgcgagggcccc 83
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>dbj|AK111498.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H23, full
           insert sequence
          Length = 1919

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                       
Query: 253 gcggattcgaggcctcggtttccgcaacgtcacgcggagccggattgtacttactacttg 312
           |||||||||||||| ||||| |||   || | || ||||||||| || || |||||| | 
Sbjct: 371 gcggattcgaggccgcggttcccgaggcgacccggggagccggactgcacctactacgtc 430

                                                                       
Query: 313 aagttcggaacttgccgcttcgggatgaagtgcaagttcaaccatccggcgcgaaagaag 372
           |||||||| |  |||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 431 aagttcgggagctgccgctttgggatgaagtgcaagttcaatcatccggcgaggaagaag 490

                           
Query: 373 aaaaataaggtgaaag 388
           || | || ||||||||
Sbjct: 491 aagagtagggtgaaag 506



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 1   atggcggacgccgacgcgaaggcccc 26
           ||||||||||||||||||| ||||||
Sbjct: 77  atggcggacgccgacgcgagggcccc 102
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 102/122 (83%)
 Strand = Plus / Minus

                                                                            
Query: 253      gcggattcgaggcctcggtttccgcaacgtcacgcggagccggattgtacttactacttg 312
                |||||||||||||| ||||| |||   || | || ||||||||| || || |||||| | 
Sbjct: 10442622 gcggattcgaggccgcggttcccgaggcgacccggggagccggactgcacctactacgtc 10442563

                                                                            
Query: 313      aagttcggaacttgccgcttcgggatgaagtgcaagttcaaccatccggcgcgaaagaag 372
                |||||||| |  |||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 10442562 aagttcgggagctgccgctttgggatgaagtgcaagttcaatcatccggcgaggaagaag 10442503

                  
Query: 373      aa 374
                ||
Sbjct: 10442502 aa 10442501



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 1        atggcggacgccgacgcgaaggcccc 26
                ||||||||||||||||||| ||||||
Sbjct: 10442916 atggcggacgccgacgcgagggcccc 10442891
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 102/122 (83%)
 Strand = Plus / Minus

                                                                            
Query: 253      gcggattcgaggcctcggtttccgcaacgtcacgcggagccggattgtacttactacttg 312
                |||||||||||||| ||||| |||   || | || ||||||||| || || |||||| | 
Sbjct: 10442504 gcggattcgaggccgcggttcccgaggcgacccggggagccggactgcacctactacgtc 10442445

                                                                            
Query: 313      aagttcggaacttgccgcttcgggatgaagtgcaagttcaaccatccggcgcgaaagaag 372
                |||||||| |  |||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 10442444 aagttcgggagctgccgctttgggatgaagtgcaagttcaatcatccggcgaggaagaag 10442385

                  
Query: 373      aa 374
                ||
Sbjct: 10442384 aa 10442383



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 1        atggcggacgccgacgcgaaggcccc 26
                ||||||||||||||||||| ||||||
Sbjct: 10442798 atggcggacgccgacgcgagggcccc 10442773
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>emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC OSJNBb0094I20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 130454

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 102/122 (83%)
 Strand = Plus / Minus

                                                                         
Query: 253   gcggattcgaggcctcggtttccgcaacgtcacgcggagccggattgtacttactacttg 312
             |||||||||||||| ||||| |||   || | || ||||||||| || || |||||| | 
Sbjct: 95123 gcggattcgaggccgcggttcccgaggcgacccggggagccggactgcacctactacgtc 95064

                                                                         
Query: 313   aagttcggaacttgccgcttcgggatgaagtgcaagttcaaccatccggcgcgaaagaag 372
             |||||||| |  |||||||| |||||||||||||||||||| ||||||||| | ||||||
Sbjct: 95063 aagttcgggagctgccgctttgggatgaagtgcaagttcaatcatccggcgaggaagaag 95004

               
Query: 373   aa 374
             ||
Sbjct: 95003 aa 95002



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     atggcggacgccgacgcgaaggcccc 26
             ||||||||||||||||||| ||||||
Sbjct: 95417 atggcggacgccgacgcgagggcccc 95392
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>dbj|AK121774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092M18, full
           insert sequence
          Length = 2001

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                       
Query: 253 gcggattcgaggcctcggtttccgcaacgtcacgcggagccggattgtacttactacttg 312
           |||||||||||||| ||||| |||   || | || ||||||||| || || |||||| | 
Sbjct: 428 gcggattcgaggccgcggttcccgaggcgacccggggagccggactgcacctactacgtc 487

                                                           
Query: 313 aagttcggaacttgccgcttcgggatgaagtgcaagttcaaccatccg 360
           |||||||| |  |||||||| |||||||||||||||||||| ||||||
Sbjct: 488 aagttcgggagctgccgctttgggatgaagtgcaagttcaatcatccg 535



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 1   atggcggacgccgacgcgaaggcccc 26
           ||||||||||||||||||| ||||||
Sbjct: 134 atggcggacgccgacgcgagggcccc 159
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 101     ccgcggcgatcgagagccagtt 122
               ||||||||||||||||||||||
Sbjct: 2066169 ccgcggcgatcgagagccagtt 2066148
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>gb|AC008064.2| Homo sapiens BAC clone RP11-178E24 from 2, complete sequence
          Length = 172579

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 497   agactgaaaaaggaatctattt 518
             ||||||||||||||||||||||
Sbjct: 77469 agactgaaaaaggaatctattt 77448
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>gb|AC124672.9| Mus musculus chromosome 1, clone RP23-328G14, complete sequence
          Length = 249008

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 67     tccccctcctccacttcatcc 87
              |||||||||||||||||||||
Sbjct: 199453 tccccctcctccacttcatcc 199433
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>gb|AC159466.3| Mus musculus 10 BAC RP23-388A21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190140

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 63    gatctccccctcctccacttcatcc 87
             ||||||||||||| |||||||||||
Sbjct: 53572 gatctccccctcccccacttcatcc 53548
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>gb|AC153568.5| Mus musculus 10 BAC RP23-66K22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186215

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 63     gatctccccctcctccacttcatcc 87
              ||||||||||||| |||||||||||
Sbjct: 166593 gatctccccctcccccacttcatcc 166569
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>gb|AC131987.10| Mus musculus chromosome 13, clone RP24-184L10, complete sequence
          Length = 174529

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 118    cagttcacagaccttgcaatctctg 142
              |||||||||||||||||| ||||||
Sbjct: 158950 cagttcacagaccttgcagtctctg 158974
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>gb|AC155302.2| Mus musculus BAC clone RP24-227A11 from chromosome 13, complete
             sequence
          Length = 152447

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 118   cagttcacagaccttgcaatctctg 142
             |||||||||||||||||| ||||||
Sbjct: 16251 cagttcacagaccttgcagtctctg 16275
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>ref|NM_120906.2| Arabidopsis thaliana unknown protein AT5G08230 mRNA, complete cds
          Length = 4533

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 54   aatcgcctcgatctccccctcctc 77
            ||||||||| ||||||||||||||
Sbjct: 3392 aatcgcctccatctccccctcctc 3415
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>ref|XM_508082.1| PREDICTED: Pan troglodytes similar to transforming, acidic
           coiled-coil containing protein 2 isoform d; anti zuai-1
           (LOC450789), mRNA
          Length = 4509

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 gaccaccggagagatcactggtgg 230
           |||||||| |||||||||||||||
Sbjct: 825 gaccaccgcagagatcactggtgg 802
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>gb|BT019266.1| Zea mays clone Contig939.F mRNA sequence
          Length = 540

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 394 gggagtagcggcagcgggagcaac 417
           ||||| ||||||||||||||||||
Sbjct: 110 gggagcagcggcagcgggagcaac 87
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>ref|NM_013510.3| Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1),
            transcript variant 1, mRNA
          Length = 6298

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5687 ctccccctcctccacttcat 5706
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>ref|NM_001003815.2| Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1),
            transcript variant 2, mRNA
          Length = 6308

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5697 ctccccctcctccacttcat 5716
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>ref|NM_001006664.2| Mus musculus erythrocyte protein band 4.1-like 1 (Epb4.1l1),
            transcript variant 3, mRNA
          Length = 6220

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5609 ctccccctcctccacttcat 5628
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>gb|BC015736.1| Homo sapiens transforming, acidic coiled-coil containing protein 2,
            mRNA (cDNA clone IMAGE:4865697), with apparent retained
            intron
          Length = 3758

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 1982 gaccaccgcagagatcactggtgg 1959
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>gb|AC127598.3| Mus musculus BAC clone RP23-84E16 from 7, complete sequence
          Length = 186752

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     atctccccctcctccacttc 83
              ||||||||||||||||||||
Sbjct: 179043 atctccccctcctccacttc 179062
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>emb|AL163249.2|HS21C049 Homo sapiens chromosome 21 segment HS21C049
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tcacagaccttgcaatctct 141
              ||||||||||||||||||||
Sbjct: 198213 tcacagaccttgcaatctct 198232
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>emb|CR854992.5| Zebrafish DNA sequence from clone DKEYP-30C3 in linkage group 5,
             complete sequence
          Length = 104348

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   attgctgatgagactgaaaa 506
             ||||||||||||||||||||
Sbjct: 83899 attgctgatgagactgaaaa 83880
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>emb|AL161448.16| Human DNA sequence from clone RP11-381H12 on chromosome 9 Contains the
             5' end of the SHB gene for SHB (Src homology 2 domain
             containing) adaptor protein B and two CpG islands,
             complete sequence
          Length = 164857

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   ggagtagcggcagcgggagc 414
             ||||||||||||||||||||
Sbjct: 28319 ggagtagcggcagcgggagc 28300
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>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the
             3' end of the TACC2 gene for transforming, acidic
             coiled-coil containing protein 2 (AZU-1), the gene for a
             novel protein (FLJ25359) and two CpG islands, complete
             sequence
          Length = 213861

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 207   gaccaccggagagatcactggtgg 230
             |||||||| |||||||||||||||
Sbjct: 58725 gaccaccgcagagatcactggtgg 58702
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>emb|Z99106.2|BSUB0003 Bacillus subtilis complete genome (section 3 of 21): from 415769 to
              611680
          Length = 195912

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 365    gaaagaagaaaaataaggtgaaag 388
              ||||||||||||| ||||||||||
Sbjct: 121355 gaaagaagaaaaagaaggtgaaag 121378
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>gb|BC039311.1| Homo sapiens transforming, acidic coiled-coil containing protein 2,
            transcript variant 3, mRNA (cDNA clone IMAGE:5295870),
            complete cds
          Length = 3990

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 2131 gaccaccgcagagatcactggtgg 2108
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>emb|AL713712.1|HSM803082 Homo sapiens mRNA; cDNA DKFZp564B0278 (from clone DKFZp564B0278)
          Length = 2927

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 1207 gaccaccgcagagatcactggtgg 1184
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>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project)
          Length = 125411

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 54   aatcgcctcgatctccccctcctc 77
            ||||||||| ||||||||||||||
Sbjct: 8913 aatcgcctccatctccccctcctc 8890
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>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project)
          Length = 89988

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 54    aatcgcctcgatctccccctcctc 77
             ||||||||| ||||||||||||||
Sbjct: 71764 aatcgcctccatctccccctcctc 71741
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>gb|AC008611.6| Homo sapiens chromosome 5 clone CTB-133M7, complete sequence
          Length = 113064

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   agaagaaaaataaggtgaaa 387
             ||||||||||||||||||||
Sbjct: 35134 agaagaaaaataaggtgaaa 35115
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>gb|AC092701.2| Homo sapiens chromosome 15, clone RP11-758M2, complete sequence
          Length = 171403

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    ccagttcacagaccttgcaa 136
              ||||||||||||||||||||
Sbjct: 157131 ccagttcacagaccttgcaa 157150
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>gb|AC015871.7| Homo sapiens chromosome 15, clone RP11-81A1, complete sequence
          Length = 151128

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   ccagttcacagaccttgcaa 136
             ||||||||||||||||||||
Sbjct: 12412 ccagttcacagaccttgcaa 12431
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>dbj|AK075097.1| Homo sapiens cDNA FLJ90616 fis, clone PLACE1002153, highly similar
           to Homo sapiens TACC2 protein (TACC2) mRNA
          Length = 1963

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 gaccaccggagagatcactggtgg 230
           |||||||| |||||||||||||||
Sbjct: 259 gaccaccgcagagatcactggtgg 236
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>gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, complete sequence
          Length = 151504

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    aaaaaggaatctatttgaag 522
              ||||||||||||||||||||
Sbjct: 102505 aaaaaggaatctatttgaag 102486
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>dbj|AK147272.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1005A05 product:erythrocyte protein band
            4.1-like 1, full insert sequence
          Length = 5903

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5294 ctccccctcctccacttcat 5313
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>dbj|AK154704.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630103P07
            product:erythrocyte protein band 4.1-like 1, full insert
            sequence
          Length = 5861

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5254 ctccccctcctccacttcat 5273
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>dbj|AK147611.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1089G17
            product:erythrocyte protein band 4.1-like 1, full insert
            sequence
          Length = 6489

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5880 ctccccctcctccacttcat 5899
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>dbj|AK164141.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630002F24 product:erythrocyte protein
            band 4.1-like 1, full insert sequence
          Length = 2779

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 2169 ctccccctcctccacttcat 2188
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>emb|BX511032.6| Zebrafish DNA sequence from clone CH211-114B16 in linkage group 6,
              complete sequence
          Length = 183388

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    cgaggcctcggtttccgcaa 279
              ||||||||||||||||||||
Sbjct: 111162 cgaggcctcggtttccgcaa 111143
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>gb|AF124730.2|AF124730 Homo sapiens chromosome 21 clone PAC N2184 map 21q22.1, complete
             sequence
          Length = 105138

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tcacagaccttgcaatctct 141
             ||||||||||||||||||||
Sbjct: 28822 tcacagaccttgcaatctct 28841
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 512      tctatttgaagaagtttaac 531
                ||||||||||||||||||||
Sbjct: 12846774 tctatttgaagaagtttaac 12846755



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 512      tctatttgaagaagtttaac 531
                ||||||||||||||||||||
Sbjct: 12833210 tctatttgaagaagtttaac 12833191
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>gb|AF220152.2|AF220152 Homo sapiens TACC2 mRNA, complete cds
          Length = 3311

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 1795 gaccaccgcagagatcactggtgg 1772
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>gb|AF528099.1| Homo sapiens transforming acidic coiled coil 2, long isoform (TACC2)
            mRNA, complete cds
          Length = 9708

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 7739 gaccaccgcagagatcactggtgg 7716
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>gb|AF528098.1| Homo sapiens transforming acidic coiled coil 2, short isoform (TACC2)
            mRNA, complete cds
          Length = 4146

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 2177 gaccaccgcagagatcactggtgg 2154
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>gb|AF095791.2|AF095791 Homo sapiens TACC2 protein (TACC2) mRNA, complete cds
          Length = 3686

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 1718 gaccaccgcagagatcactggtgg 1695
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>gb|AC127287.4| Mus musculus BAC clone RP23-345G7 from chromosome 7, complete sequence
          Length = 209901

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     atctccccctcctccacttc 83
              ||||||||||||||||||||
Sbjct: 203146 atctccccctcctccacttc 203127
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>gb|AF176646.1|AF176646 Homo sapiens anti zuai-1 mRNA, complete cds
          Length = 3813

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 2107 gaccaccgcagagatcactggtgg 2084
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>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0710F09
          Length = 198867

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    tctatttgaagaagtttaac 531
              ||||||||||||||||||||
Sbjct: 104898 tctatttgaagaagtttaac 104879



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   tctatttgaagaagtttaac 531
             ||||||||||||||||||||
Sbjct: 91334 tctatttgaagaagtttaac 91315
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>dbj|BS000171.1| Pan troglodytes chromosome 22 clone:PTB-086M04, map 22, complete
              sequences
          Length = 218680

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tcacagaccttgcaatctct 141
              ||||||||||||||||||||
Sbjct: 104655 tcacagaccttgcaatctct 104674
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>dbj|BS000157.1| Pan troglodytes chromosome 22 clone:RP43-154K22, map 22, complete
              sequences
          Length = 192836

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tcacagaccttgcaatctct 141
              ||||||||||||||||||||
Sbjct: 113352 tcacagaccttgcaatctct 113371
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>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete
             sequence
          Length = 116887

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ctccccctcctccacttcat 85
             ||||||||||||||||||||
Sbjct: 77245 ctccccctcctccacttcat 77264
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>dbj|AK027066.1| Homo sapiens cDNA: FLJ23413 fis, clone HEP20672, highly similar to
           AF220152 Homo sapiens TACC2 mRNA
          Length = 2297

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 207 gaccaccggagagatcactggtgg 230
           |||||||| |||||||||||||||
Sbjct: 902 gaccaccgcagagatcactggtgg 879
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>dbj|AK122251.1| Mus musculus mRNA for mKIAA0338 protein
          Length = 6086

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5476 ctccccctcctccacttcat 5495
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>ref|NM_206862.1| Homo sapiens transforming, acidic coiled-coil containing protein 2
            (TACC2), transcript variant 1, mRNA
          Length = 9706

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 7758 gaccaccgcagagatcactggtgg 7735
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>ref|NM_206860.1| Homo sapiens transforming, acidic coiled-coil containing protein 2
            (TACC2), transcript variant 3, mRNA
          Length = 3825

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 1967 gaccaccgcagagatcactggtgg 1944
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>ref|NM_206861.1| Homo sapiens transforming, acidic coiled-coil containing protein 2
            (TACC2), transcript variant 2, mRNA
          Length = 4144

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 2196 gaccaccgcagagatcactggtgg 2173
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>ref|NM_006997.2| Homo sapiens transforming, acidic coiled-coil containing protein 2
            (TACC2), transcript variant 4, mRNA
          Length = 3916

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 1967 gaccaccgcagagatcactggtgg 1944
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>ref|NM_172090.1| Rattus norvegicus erythrocyte protein band 4.1-like 1 (Epb4.1l1),
            transcript variant 1, mRNA
          Length = 6102

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5492 ctccccctcctccacttcat 5511
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>emb|AL833304.1|HSM804617 Homo sapiens mRNA; cDNA DKFZp451N249 (from clone DKFZp451N249)
          Length = 8821

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 207  gaccaccggagagatcactggtgg 230
            |||||||| |||||||||||||||
Sbjct: 6857 gaccaccgcagagatcactggtgg 6834
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>dbj|AB019256.1| Rattus norvegicus mRNA for brain 4.1(S), complete cds
          Length = 6102

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   ctccccctcctccacttcat 85
            ||||||||||||||||||||
Sbjct: 5492 ctccccctcctccacttcat 5511
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>dbj|AB001488.1| Bacillus subtilis genome sequence, 148 kb sequence of the region
             between 35 and 47 degree
          Length = 148068

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 365   gaaagaagaaaaataaggtgaaag 388
             ||||||||||||| ||||||||||
Sbjct: 70798 gaaagaagaaaaagaaggtgaaag 70821


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,244,690
Number of Sequences: 3902068
Number of extensions: 4244690
Number of successful extensions: 91432
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91185
Number of HSP's gapped (non-prelim): 241
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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