Clone Information

BLAST Search Result

Clone Name	basd17o09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_465744.1\| Oryza sativa (japonica cultivar-group), mRNA	371	2e-99
2	gb\|BT018403.1\| Zea mays clone EL01N0324C05.d mRNA sequence	281	1e-72
3	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	141	3e-30
4	dbj\|AP004837.3\| Oryza sativa (japonica cultivar-group) genomic D...	141	3e-30
5	dbj\|AP004864.3\| Oryza sativa (japonica cultivar-group) genomic D...	141	3e-30
6	gb\|BT013712.1\| Lycopersicon esculentum clone 132556F, mRNA sequence	111	3e-21
7	ref\|NM_189933.1\| Oryza sativa (japonica cultivar-group), predic...	103	7e-19
8	gb\|AF441079.1\| Arabidopsis thaliana O-linked N-acetyl glucosamin...	90	1e-14
9	ref\|NM_111295.3\| Arabidopsis thaliana SEC (SECRET AGENT); transf...	82	3e-12
10	gb\|AY117340.1\| Arabidopsis thaliana putative O-linked GlcNAc tra...	82	3e-12
11	gb\|AY090938.1\| Arabidopsis thaliana putative O-linked GlcNAc tra...	82	3e-12
12	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	58	4e-05
13	dbj\|AP003433.3\| Oryza sativa (japonica cultivar-group) genomic D...	58	4e-05
14	gb\|AC007587.12\| Drosophila melanogaster clone BACR02D22, complet...	56	2e-04
15	ref\|NM_165427.1\| Drosophila melanogaster O-glycosyltransferase C...	56	2e-04
16	ref\|NM_165426.1\| Drosophila melanogaster O-glycosyltransferase C...	56	2e-04
17	ref\|NM_078896.2\| Drosophila melanogaster O-glycosyltransferase C...	56	2e-04
18	gb\|AF217788.1\|AF217788 Drosophila melanogaster O-glycosyltransfe...	56	2e-04
19	gb\|AF145622.1\|AF145622 Drosophila melanogaster clone GH04245 BcD...	56	2e-04
20	gb\|AE003787.5\| Drosophila melanogaster chromosome 2R, section 2 ...	56	2e-04
21	gb\|AY102449.1\| Coffea arabica clone CFGA276 microsatellite sequence	50	0.009
22	gb\|AC016829.7\|ATAC016829 Arabidopsis thaliana chromosome III BAC...	48	0.037
23	emb\|AL928904.16\| Mouse DNA sequence from clone RP23-463M17 on ch...	44	0.57
24	dbj\|BA000028.3\| Oceanobacillus iheyensis HTE831 DNA, complete ge...	42	2.3
25	ref\|XM_475138.1\| Oryza sativa (japonica cultivar-group), predic...	40	8.9
26	gb\|AC104707.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.9
27	gb\|AC119289.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.9
28	gb\|AC160114.2\| Mus musculus BAC clone RP24-70J8 from chromosome ...	40	8.9
29	gb\|AY395749.1\| Drosophila melanogaster clone GH16 ATM protein-li...	40	8.9
30	gb\|AY395748.1\| Drosophila melanogaster clone LP4 ATM protein-lik...	40	8.9
31	gb\|AC110622.6\| Mus musculus BAC clone RP23-204H3 from chromosome...	40	8.9
32	emb\|BX842700.35\| Zebrafish DNA sequence from clone DKEY-2P18 in ...	40	8.9
33	gb\|AC123844.4\| Mus musculus BAC clone RP23-416P14 from chromosom...	40	8.9
34	gb\|AC116659.3\| Mus musculus BAC clone RP24-147E15 from 7, comple...	40	8.9
35	gb\|AC124962.19\| Medicago truncatula clone mth2-24d19, complete s...	40	8.9
36	gb\|AC123975.16\| Medicago truncatula clone mth2-12m13, complete s...	40	8.9
37	emb\|AL353630.12\| Human DNA sequence from clone RP11-37K5 on chro...	40	8.9
38	emb\|AL158147.17\| Human DNA sequence from clone RP11-125K10 on ch...	40	8.9
39	emb\|AL161740.16\| Human DNA sequence from clone RP6-239D12 on chr...	40	8.9
40	emb\|AL645910.8\| Mouse DNA sequence from clone RP23-173M6 on chro...	40	8.9
41	ref\|NM_142178.1\| Drosophila melanogaster telomere fusion CG6535-...	40	8.9
42	gb\|AC009904.7\| Drosophila melanogaster, chromosome 3R, region 88...	40	8.9
43	tpg\|BK004084.1\| TPA: TPA_exp: Drosophila melanogaster telomere f...	40	8.9
44	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.9
45	gb\|AC073081.5\| Homo sapiens BAC clone RP11-310H21 from 2, comple...	40	8.9
46	gb\|AE003708.3\| Drosophila melanogaster chromosome 3R, section 46...	40	8.9
47	dbj\|AK122261.1\| Mus musculus mRNA for mKIAA0371 protein	40	8.9
48	gb\|AC146616.3\| Mus musculus BAC clone RP23-9A18 from 7, complete...	40	8.9
49	emb\|AL731672.12\| Mouse DNA sequence from clone RP23-161L11 on ch...	40	8.9

>ref|XM_465744.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2862

 Score =  371 bits (187), Expect = 2e-99
 Identities = 539/652 (82%), Gaps = 4/652 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    tagctataaacaagnctctttgtctgcgtcctgnnttttccagnaagtaacgtgcaacct 61
            |||||||||||| | ||||| || |||||||||  |||||| | ||| ||| ||||||||
Sbjct: 1521 tagctataaaca-ggctcttcgtttgcgtcctga-ttttcctg-aagcaacctgcaacct 1577

                                                                        
Query: 62   tcttcatactctacagagtgtttgtgactgggaaaacagagnatactatgttccgtgaag 121
            | | |||||| ||||| |||| ||||| ||||||||||| | || | ||||| || || |
Sbjct: 1578 tttgcatactttacagtgtgtgtgtgattgggaaaacag-gaatgccatgtttcgcgatg 1636

                                                                        
Query: 122  ttgaagagataatcagacggcagataaagatgtcacttctgccaagtgtgcagccatttc 181
            ||||||| || ||||||  ||| |||||||||||| | || ||||| ||||| || || |
Sbjct: 1637 ttgaagaaattatcagaaagcaaataaagatgtcagtacttccaagcgtgcaacctttcc 1696

                                                                        
Query: 182  atgctattgcttatcctattgatcctttgctcgccttggaaattagccgcaaatatgcag 241
            |||| || || ||||||||||||||  |||| ||  | || || ||| | |||||||| |
Sbjct: 1697 atgccatcgcatatcctattgatcccatgcttgcactagagataagctgtaaatatgctg 1756

                                                                        
Query: 242  tccagtgttcattaattgcttctcgctttgggttgccaccatttgtccacccaccccctt 301
              || ||||| || ||||| ||||| ||||| |||||  | ||||| || || || ||| 
Sbjct: 1757 ctcattgttccttgattgcctctcgttttggattgccgtcctttgtgcatccccctcctg 1816

                                                                        
Query: 302  tacccgtgaaggcagagggtaaacatggccgactcagggtcggatatgttagtagtgatt 361
            | || || || ||||||||||||||  | ||||| ||||| ||||||||||| || ||||
Sbjct: 1817 ttcctgtcaaagcagagggtaaacactgtcgactaagggttggatatgttagcagcgatt 1876

                                                                        
Query: 362  ttggtaatcatccgctttcccatctcatgggttcagtatttggtatgcatgaccgtgaca 421
            |||| |||||||| || |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1877 ttgggaatcatcccctctcccatctcatgggttcagtatttggaatgcatgaccgtgaca 1936

                                                                        
Query: 422  atgttgaggttttttgctacgcgttgagtcaaaatgatggcactgaatggcgacagcgta 481
            |||||||||| || ||||| ||| |||||||||||||||| ||||||||| | |||||||
Sbjct: 1937 atgttgaggtcttctgctatgcgctgagtcaaaatgatggtactgaatggaggcagcgta 1996

                                                                        
Query: 482  tccaggctgaggcagagcatttcattgatgtgtctgccatgacatctgatgtgatagcca 541
            | ||| ||||||| ||||||||  | ||||||||||||||||| |||||| |||| ||||
Sbjct: 1997 ttcagtctgaggctgagcattttgtggatgtgtctgccatgacctctgatatgattgcca 2056

                                                                        
Query: 542  aaatgataaatgaagacaaaatacaagttttaatcaatcttaatggctacacaaagggtg 601
             ||| || ||| |||||||||||||| | ||||| || |||||||| |||||||||||||
Sbjct: 2057 gaatcattaatcaagacaaaatacaaatattaataaaccttaatggttacacaaagggtg 2116

                                                                
Query: 602  caaggaatgaaattttcgcgatgcaaccagcacctattcaagtttcgtacat 653
            | |||||||||||||| ||  |||||||||| || || || |||||||||||
Sbjct: 2117 ccaggaatgaaatttttgcactgcaaccagcccccatccaggtttcgtacat 2168

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>gb|BT018403.1| Zea mays clone EL01N0324C05.d mRNA sequence
          Length = 1615

 Score =  281 bits (142), Expect = 1e-72
 Identities = 361/434 (83%)
 Strand = Plus / Plus

                                                                       
Query: 220 gaaattagccgcaaatatgcagtccagtgttcattaattgcttctcgctttgggttgcca 279
           ||||| ||||| |||||||| | ||| ||||| ||  |||| ||||| |||||| |||| 
Sbjct: 8   gaaataagccgtaaatatgcggcccactgttccttgcttgcctctcgttttgggctgccg 67

                                                                       
Query: 280 ccatttgtccacccaccccctttacccgtgaaggcagagggtaaacatggccgactcagg 339
           || ||||| || ||||| ||| | || || || ||||||||||||||  ||||||| |  
Sbjct: 68  ccttttgtgcatccacctcctgttcctgtaaaagcagagggtaaacactgccgactgaaa 127

                                                                       
Query: 340 gtcggatatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagta 399
           || |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 128 gtaggatatgtgagtagtgattttggtaatcaccccctttcccatctcatgggatcagta 187

                                                                       
Query: 400 tttggtatgcatgaccgtgacaatgttgaggttttttgctacgcgttgagtcaaaatgat 459
           ||||| |||||||| |||| |||| | ||||| |||||||| ||  | |||||||| |||
Sbjct: 188 tttggaatgcatgatcgtgccaatatcgaggtcttttgctatgcactcagtcaaaacgat 247

                                                                       
Query: 460 ggcactgaatggcgacagcgtatccaggctgaggcagagcatttcattgatgtgtctgcc 519
           || ||||| ||| | |||||||| ||| |||||||||| |||||  | ||||| ||||||
Sbjct: 248 ggtactgagtggaggcagcgtattcagtctgaggcagaacattttgtcgatgtttctgcc 307

                                                                       
Query: 520 atgacatctgatgtgatagccaaaatgataaatgaagacaaaatacaagttttaatcaat 579
           ||||| || |||   || |||||  | || ||| |||||||||||||| |||| || |||
Sbjct: 308 atgacttccgataatatcgccaagcttatcaatcaagacaaaatacaaattttgataaat 367

                                                                       
Query: 580 cttaatggctacacaaagggtgcaaggaatgaaattttcgcgatgcaaccagcacctatt 639
           ||||||||||||||||||||||| ||||| |||||||| || ||||| ||||||||||| 
Sbjct: 368 cttaatggctacacaaagggtgccaggaacgaaatttttgcaatgcagccagcacctatc 427

                         
Query: 640 caagtttcgtacat 653
           ||||||||||||||
Sbjct: 428 caagtttcgtacat 441

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 3e-30
 Identities = 140/163 (85%)
 Strand = Plus / Minus

                                                                            
Query: 436      tgctacgcgttgagtcaaaatgatggcactgaatggcgacagcgtatccaggctgaggca 495
                ||||| ||| |||||||||||||||| ||||||||| | |||||||| ||| ||||||| 
Sbjct: 17148663 tgctatgcgctgagtcaaaatgatggtactgaatggaggcagcgtattcagtctgaggct 17148604

                                                                            
Query: 496      gagcatttcattgatgtgtctgccatgacatctgatgtgatagccaaaatgataaatgaa 555
                ||||||||  | ||||||||||||||||| |||||| |||| |||| ||| || ||| ||
Sbjct: 17148603 gagcattttgtggatgtgtctgccatgacctctgatatgattgccagaatcattaatcaa 17148544

                                                           
Query: 556      gacaaaatacaagttttaatcaatcttaatggctacacaaagg 598
                |||||||||||| | ||||| || |||||||| ||||||||||
Sbjct: 17148543 gacaaaatacaaatattaataaaccttaatggttacacaaagg 17148501



 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                            
Query: 344      gatatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttg 403
                |||||||||| || |||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 17148838 gatatgttagcagcgattttgggaatcatcccctctcccatctcatgggttcagtatttg 17148779

                                             
Query: 404      gtatgcatgaccgtgacaatgttgaggtt 432
                | |||||||||||||||||||||||||||
Sbjct: 17148778 gaatgcatgaccgtgacaatgttgaggtt 17148750



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                          
Query: 596      agggtgcaaggaatgaaattttcgcgatgcaaccagcacctattcaagtttcgtacat 653
                ||||||| |||||||||||||| ||  |||||||||| || || || |||||||||||
Sbjct: 17148176 agggtgccaggaatgaaatttttgcactgcaaccagcccccatccaggtttcgtacat 17148119

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>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0483C08
          Length = 143855

 Score =  141 bits (71), Expect = 3e-30
 Identities = 140/163 (85%)
 Strand = Plus / Minus

                                                                          
Query: 436    tgctacgcgttgagtcaaaatgatggcactgaatggcgacagcgtatccaggctgaggca 495
              ||||| ||| |||||||||||||||| ||||||||| | |||||||| ||| ||||||| 
Sbjct: 130036 tgctatgcgctgagtcaaaatgatggtactgaatggaggcagcgtattcagtctgaggct 129977

                                                                          
Query: 496    gagcatttcattgatgtgtctgccatgacatctgatgtgatagccaaaatgataaatgaa 555
              ||||||||  | ||||||||||||||||| |||||| |||| |||| ||| || ||| ||
Sbjct: 129976 gagcattttgtggatgtgtctgccatgacctctgatatgattgccagaatcattaatcaa 129917

                                                         
Query: 556    gacaaaatacaagttttaatcaatcttaatggctacacaaagg 598
              |||||||||||| | ||||| || |||||||| ||||||||||
Sbjct: 129916 gacaaaatacaaatattaataaaccttaatggttacacaaagg 129874



 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                          
Query: 344    gatatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttg 403
              |||||||||| || |||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 130211 gatatgttagcagcgattttgggaatcatcccctctcccatctcatgggttcagtatttg 130152

                                           
Query: 404    gtatgcatgaccgtgacaatgttgaggtt 432
              | |||||||||||||||||||||||||||
Sbjct: 130151 gaatgcatgaccgtgacaatgttgaggtt 130123



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                        
Query: 596    agggtgcaaggaatgaaattttcgcgatgcaaccagcacctattcaagtttcgtacat 653
              ||||||| |||||||||||||| ||  |||||||||| || || || |||||||||||
Sbjct: 129549 agggtgccaggaatgaaatttttgcactgcaaccagcccccatccaggtttcgtacat 129492

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>dbj|AP004864.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0048K16
          Length = 159891

 Score =  141 bits (71), Expect = 3e-30
 Identities = 140/163 (85%)
 Strand = Plus / Minus

                                                                         
Query: 436   tgctacgcgttgagtcaaaatgatggcactgaatggcgacagcgtatccaggctgaggca 495
             ||||| ||| |||||||||||||||| ||||||||| | |||||||| ||| ||||||| 
Sbjct: 19430 tgctatgcgctgagtcaaaatgatggtactgaatggaggcagcgtattcagtctgaggct 19371

                                                                         
Query: 496   gagcatttcattgatgtgtctgccatgacatctgatgtgatagccaaaatgataaatgaa 555
             ||||||||  | ||||||||||||||||| |||||| |||| |||| ||| || ||| ||
Sbjct: 19370 gagcattttgtggatgtgtctgccatgacctctgatatgattgccagaatcattaatcaa 19311

                                                        
Query: 556   gacaaaatacaagttttaatcaatcttaatggctacacaaagg 598
             |||||||||||| | ||||| || |||||||| ||||||||||
Sbjct: 19310 gacaaaatacaaatattaataaaccttaatggttacacaaagg 19268



 Score =  129 bits (65), Expect = 1e-26
 Identities = 83/89 (93%)
 Strand = Plus / Minus

                                                                         
Query: 344   gatatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttg 403
             |||||||||| || |||||||| |||||||| || |||||||||||||||||||||||||
Sbjct: 19605 gatatgttagcagcgattttgggaatcatcccctctcccatctcatgggttcagtatttg 19546

                                          
Query: 404   gtatgcatgaccgtgacaatgttgaggtt 432
             | |||||||||||||||||||||||||||
Sbjct: 19545 gaatgcatgaccgtgacaatgttgaggtt 19517



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 596   agggtgcaaggaatgaaattttcgcgatgcaaccagcacctattcaagtttcgtacat 653
             ||||||| |||||||||||||| ||  |||||||||| || || || |||||||||||
Sbjct: 18943 agggtgccaggaatgaaatttttgcactgcaaccagcccccatccaggtttcgtacat 18886

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>gb|BT013712.1| Lycopersicon esculentum clone 132556F, mRNA sequence
          Length = 3216

 Score =  111 bits (56), Expect = 3e-21
 Identities = 200/248 (80%)
 Strand = Plus / Plus

                                                                        
Query: 337  agggtcggatatgttagtagtgattttggtaatcatccgctttcccatctcatgggttca 396
            ||||| |||||||| |||||||||||||| || || || || || ||||| |||||||||
Sbjct: 1922 agggttggatatgtgagtagtgattttggcaaccacccactatcacatctaatgggttca 1981

                                                                        
Query: 397  gtatttggtatgcatgaccgtgacaatgttgaggttttttgctacgcgttgagtcaaaat 456
            || ||||| ||||| ||  | || ||||||||||| || |||||||| ||||||| ||||
Sbjct: 1982 gtctttggcatgcacgatagagaaaatgttgaggtgttctgctacgctttgagtccaaat 2041

                                                                        
Query: 457  gatggcactgaatggcgacagcgtatccaggctgaggcagagcatttcattgatgtgtct 516
            ||||||||||| ||| | |  || || ||| | || |||||||||||  ||||||| || 
Sbjct: 2042 gatggcactgagtggaggctccgcattcagtcagaagcagagcattttgttgatgtatcg 2101

                                                                        
Query: 517  gccatgacatctgatgtgatagccaaaatgataaatgaagacaaaatacaagttttaatc 576
             || || |||||||||||||||| |  ||||| ||||| ||  |||||||  |  |||||
Sbjct: 2102 tccttggcatctgatgtgatagctaggatgattaatgaggatcaaatacagatcctaatc 2161

                    
Query: 577  aatcttaa 584
            ||||||||
Sbjct: 2162 aatcttaa 2169

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>ref|NM_189933.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2742

 Score =  103 bits (52), Expect = 7e-19
 Identities = 244/308 (79%)
 Strand = Plus / Plus

                                                                        
Query: 346  tatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttggt 405
            ||||| |||||||||||||| |||||||| || || ||||| ||||||||  ||||||| 
Sbjct: 1720 tatgtgagtagtgattttggcaatcatcccctgtctcatctgatgggttctatatttgga 1779

                                                                        
Query: 406  atgcatgaccgtgacaatgttgaggttttttgctacgcgttgagtcaaaatgatggcact 465
            |||||  | |  |||| | | |||||||| || || ||  |||| ||| ||||||| || 
Sbjct: 1780 atgcacaatcaagacactatcgaggttttctgttatgccctgagccaagatgatggtaca 1839

                                                                        
Query: 466  gaatggcgacagcgtatccaggctgaggcagagcatttcattgatgtgtctgccatgaca 525
            |||||| | |||||||| |   |||| || ||||| ||||||||||||||  | ||| ||
Sbjct: 1840 gaatggaggcagcgtattcgatctgaagctgagcacttcattgatgtgtcatcaatgtca 1899

                                                                        
Query: 526  tctgatgtgatagccaaaatgataaatgaagacaaaatacaagttttaatcaatcttaat 585
            |||||| |||| || ||| | || ||||| || || |||||| || | || |||||||||
Sbjct: 1900 tctgatatgattgctaaagttatcaatgaggataagatacaaattcttattaatcttaat 1959

                                                                        
Query: 586  ggctacacaaagggtgcaaggaatgaaattttcgcgatgcaaccagcacctattcaagtt 645
            ||||| || ||||||||| |||||||||| |||||  | |||||||| || || || |||
Sbjct: 1960 ggctatactaagggtgcacggaatgaaatattcgctttacaaccagccccaatccaggtt 2019

                    
Query: 646  tcgtacat 653
            || |||||
Sbjct: 2020 tcttacat 2027

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>gb|AF441079.1| Arabidopsis thaliana O-linked N-acetyl glucosamine transferase mRNA,
            complete cds
          Length = 3305

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 177/221 (80%)
 Strand = Plus / Plus

                                                                        
Query: 343  ggatatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtattt 402
            |||||||| || |||||||||||||| |||||| | || || |||||||| ||||| |||
Sbjct: 1912 ggatatgtgagcagtgattttggtaaccatccgttgtcacacctcatgggatcagtgttt 1971

                                                                        
Query: 403  ggtatgcatgaccgtgacaatgttgaggttttttgctacgcgttgagtcaaaatgatggc 462
            || |||||  || | || || ||||||||||| ||||| ||  |||||  |||||||   
Sbjct: 1972 gggatgcacaacagagaaaacgttgaggttttctgctatgcactgagtgcaaatgataat 2031

                                                                        
Query: 463  actgaatggcgacagcgtatccaggctgaggcagagcatttcattgatgtgtctgccatg 522
            ||||| ||| ||||||| |||||| | || || ||||||||| | || || ||||| |||
Sbjct: 2032 actgagtggagacagcgaatccagtcagaagccgagcatttcctggacgtttctgctatg 2091

                                                     
Query: 523  acatctgatgtgatagccaaaatgataaatgaagacaaaat 563
             |||||||||  || |||||||| |||||  ||||||||||
Sbjct: 2092 tcatctgatgctatcgccaaaattataaaccaagacaaaat 2132

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>ref|NM_111295.3| Arabidopsis thaliana SEC (SECRET AGENT); transferase, transferring
            glycosyl groups AT3G04240 (SEC) mRNA, complete cds
          Length = 3337

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 167/209 (79%)
 Strand = Plus / Plus

                                                                        
Query: 355  agtgattttggtaatcatccgctttcccatctcatgggttcagtatttggtatgcatgac 414
            |||||||||||||| |||||| | || || |||||||| ||||| ||||| |||||  ||
Sbjct: 1945 agtgattttggtaaccatccgttgtcacacctcatgggatcagtgtttgggatgcacaac 2004

                                                                        
Query: 415  cgtgacaatgttgaggttttttgctacgcgttgagtcaaaatgatggcactgaatggcga 474
             | || || ||||||||||| ||||| ||  |||||  |||||||   ||||| ||| ||
Sbjct: 2005 agagaaaacgttgaggttttctgctatgctctgagtgcaaatgataatactgagtggaga 2064

                                                                        
Query: 475  cagcgtatccaggctgaggcagagcatttcattgatgtgtctgccatgacatctgatgtg 534
            ||||| |||||| | || || ||||||||| | || || ||||| ||| |||||||||  
Sbjct: 2065 cagcgaatccagtcagaagccgagcatttcctggacgtttctgctatgtcatctgatgct 2124

                                         
Query: 535  atagccaaaatgataaatgaagacaaaat 563
            || |||||||| |||||  ||||||||||
Sbjct: 2125 atcgccaaaattataaaccaagacaaaat 2153

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>gb|AY117340.1| Arabidopsis thaliana putative O-linked GlcNAc transferase (At3g04240)
            mRNA, complete cds
          Length = 2965

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 167/209 (79%)
 Strand = Plus / Plus

                                                                        
Query: 355  agtgattttggtaatcatccgctttcccatctcatgggttcagtatttggtatgcatgac 414
            |||||||||||||| |||||| | || || |||||||| ||||| ||||| |||||  ||
Sbjct: 1795 agtgattttggtaaccatccgttgtcacacctcatgggatcagtgtttgggatgcacaac 1854

                                                                        
Query: 415  cgtgacaatgttgaggttttttgctacgcgttgagtcaaaatgatggcactgaatggcga 474
             | || || ||||||||||| ||||| ||  |||||  |||||||   ||||| ||| ||
Sbjct: 1855 agagaaaacgttgaggttttctgctatgctctgagtgcaaatgataatactgagtggaga 1914

                                                                        
Query: 475  cagcgtatccaggctgaggcagagcatttcattgatgtgtctgccatgacatctgatgtg 534
            ||||| |||||| | || || ||||||||| | || || ||||| ||| |||||||||  
Sbjct: 1915 cagcgaatccagtcagaagccgagcatttcctggacgtttctgctatgtcatctgatgct 1974

                                         
Query: 535  atagccaaaatgataaatgaagacaaaat 563
            || |||||||| |||||  ||||||||||
Sbjct: 1975 atcgccaaaattataaaccaagacaaaat 2003

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>gb|AY090938.1| Arabidopsis thaliana putative O-linked GlcNAc transferase (At3g04240)
            mRNA, complete cds
          Length = 3344

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 167/209 (79%)
 Strand = Plus / Plus

                                                                        
Query: 355  agtgattttggtaatcatccgctttcccatctcatgggttcagtatttggtatgcatgac 414
            |||||||||||||| |||||| | || || |||||||| ||||| ||||| |||||  ||
Sbjct: 1945 agtgattttggtaaccatccgttgtcacacctcatgggatcagtgtttgggatgcacaac 2004

                                                                        
Query: 415  cgtgacaatgttgaggttttttgctacgcgttgagtcaaaatgatggcactgaatggcga 474
             | || || ||||||||||| ||||| ||  |||||  |||||||   ||||| ||| ||
Sbjct: 2005 agagaaaacgttgaggttttctgctatgctctgagtgcaaatgataatactgagtggaga 2064

                                                                        
Query: 475  cagcgtatccaggctgaggcagagcatttcattgatgtgtctgccatgacatctgatgtg 534
            ||||| |||||| | || || ||||||||| | || || ||||| ||| |||||||||  
Sbjct: 2065 cagcgaatccagtcagaagccgagcatttcctggacgtttctgctatgtcatctgatgct 2124

                                         
Query: 535  atagccaaaatgataaatgaagacaaaat 563
            || |||||||| |||||  ||||||||||
Sbjct: 2125 atcgccaaaattataaaccaagacaaaat 2153

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 346      tatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttggt 405
                ||||| |||||||||||||| |||||||| || || ||||| ||||||||  ||||||| 
Sbjct: 39877748 tatgtgagtagtgattttggcaatcatcccctgtctcatctgatgggttctatatttgga 39877689

                     
Query: 406      atgca 410
                |||||
Sbjct: 39877688 atgca 39877684



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 115/145 (79%)
 Strand = Plus / Minus

                                                                            
Query: 446      tgagtcaaaatgatggcactgaatggcgacagcgtatccaggctgaggcagagcatttca 505
                |||| ||| ||||||| || |||||| | |||||||| |   |||| || ||||| ||||
Sbjct: 39877584 tgagccaagatgatggtacagaatggaggcagcgtattcgatctgaagctgagcacttca 39877525

                                                                            
Query: 506      ttgatgtgtctgccatgacatctgatgtgatagccaaaatgataaatgaagacaaaatac 565
                ||||||||||  | ||| |||||||| |||| || ||| | || ||||| || || ||||
Sbjct: 39877524 ttgatgtgtcatcaatgtcatctgatatgattgctaaagttatcaatgaggataagatac 39877465

                                         
Query: 566      aagttttaatcaatcttaatggcta 590
                || || | || ||||||||||||||
Sbjct: 39877464 aaattcttattaatcttaatggcta 39877440

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>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0004D12
          Length = 138136

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 346   tatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttggt 405
             ||||| |||||||||||||| |||||||| || || ||||| ||||||||  ||||||| 
Sbjct: 58456 tatgtgagtagtgattttggcaatcatcccctgtctcatctgatgggttctatatttgga 58397

                  
Query: 406   atgca 410
             |||||
Sbjct: 58396 atgca 58392



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 115/145 (79%)
 Strand = Plus / Minus

                                                                         
Query: 446   tgagtcaaaatgatggcactgaatggcgacagcgtatccaggctgaggcagagcatttca 505
             |||| ||| ||||||| || |||||| | |||||||| |   |||| || ||||| ||||
Sbjct: 58292 tgagccaagatgatggtacagaatggaggcagcgtattcgatctgaagctgagcacttca 58233

                                                                         
Query: 506   ttgatgtgtctgccatgacatctgatgtgatagccaaaatgataaatgaagacaaaatac 565
             ||||||||||  | ||| |||||||| |||| || ||| | || ||||| || || ||||
Sbjct: 58232 ttgatgtgtcatcaatgtcatctgatatgattgctaaagttatcaatgaggataagatac 58173

                                      
Query: 566   aagttttaatcaatcttaatggcta 590
             || || | || ||||||||||||||
Sbjct: 58172 aaattcttattaatcttaatggcta 58148

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>gb|AC007587.12| Drosophila melanogaster clone BACR02D22, complete sequence
          Length = 185915

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 583   aatggctacacaaagggtgcaaggaatgaaat 614
             ||||||||||||||||||||||| ||||||||
Sbjct: 71132 aatggctacacaaagggtgcaagaaatgaaat 71101

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>ref|NM_165427.1| Drosophila melanogaster O-glycosyltransferase CG10392-RC, transcript
            variant C (Ogt), mRNA
          Length = 3585

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 583  aatggctacacaaagggtgcaaggaatgaaat 614
            ||||||||||||||||||||||| ||||||||
Sbjct: 2194 aatggctacacaaagggtgcaagaaatgaaat 2225

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>ref|NM_165426.1| Drosophila melanogaster O-glycosyltransferase CG10392-RA, transcript
            variant A (Ogt), mRNA
          Length = 3530

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 583  aatggctacacaaagggtgcaaggaatgaaat 614
            ||||||||||||||||||||||| ||||||||
Sbjct: 2139 aatggctacacaaagggtgcaagaaatgaaat 2170

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>ref|NM_078896.2| Drosophila melanogaster O-glycosyltransferase CG10392-RB, transcript
            variant B (Ogt), mRNA
          Length = 3521

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 583  aatggctacacaaagggtgcaaggaatgaaat 614
            ||||||||||||||||||||||| ||||||||
Sbjct: 2130 aatggctacacaaagggtgcaagaaatgaaat 2161

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>gb|AF217788.1|AF217788 Drosophila melanogaster O-glycosyltransferase mRNA, complete cds
          Length = 3560

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 583  aatggctacacaaagggtgcaaggaatgaaat 614
            ||||||||||||||||||||||| ||||||||
Sbjct: 2138 aatggctacacaaagggtgcaagaaatgaaat 2169

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>gb|AF145622.1|AF145622 Drosophila melanogaster clone GH04245 BcDNA.GH04245 (BcDNA.GH04245)
            mRNA, partial cds
          Length = 3161

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 583  aatggctacacaaagggtgcaaggaatgaaat 614
            ||||||||||||||||||||||| ||||||||
Sbjct: 2130 aatggctacacaaagggtgcaagaaatgaaat 2161

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>gb|AE003787.5| Drosophila melanogaster chromosome 2R, section 2 of 73 of the complete
              sequence
          Length = 294609

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 583    aatggctacacaaagggtgcaaggaatgaaat 614
              ||||||||||||||||||||||| ||||||||
Sbjct: 248968 aatggctacacaaagggtgcaagaaatgaaat 248999

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>gb|AY102449.1| Coffea arabica clone CFGA276 microsatellite sequence
          Length = 524

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 346 tatgttagtagtgattttggtaatcatccgctttcccatctcatgggttcagtatttggt 405
           ||||| || ||||||||||||||||| || || || || || |||||||| |||||||| 
Sbjct: 260 tatgtgagcagtgattttggtaatcacccactgtcacaccttatgggttcggtatttggc 319

                
Query: 406 atgca 410
           |||||
Sbjct: 320 atgca 324



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 428 aggttttttgctacgcgttgagtcaaaatgatggcactgaatgg 471
           ||||||| ||||| || |||||||  ||||| ||||||||||||
Sbjct: 435 aggttttctgctatgctttgagtcctaatgacggcactgaatgg 478

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>gb|AC016829.7|ATAC016829 Arabidopsis thaliana chromosome III BAC T6K12 genomic sequence,
             complete sequence
          Length = 110804

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 355   agtgattttggtaatcatccgctttcccatctcatgggttcagtatttggtatgca 410
             |||||||||||||| |||||| | || || |||||||| ||||| ||||| |||||
Sbjct: 44289 agtgattttggtaaccatccgttgtcacacctcatgggatcagtgtttgggatgca 44344

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>emb|AL928904.16| Mouse DNA sequence from clone RP23-463M17 on chromosome 2, complete
             sequence
          Length = 142294

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 551   atgaagacaaaatacaagtttt 572
             ||||||||||||||||||||||
Sbjct: 67906 atgaagacaaaatacaagtttt 67927

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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 554     aagacaaaatacaagttttaa 574
               |||||||||||||||||||||
Sbjct: 1558044 aagacaaaatacaagttttaa 1558064

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>ref|XM_475138.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 380 cccatctcatgggttcagta 399
           ||||||||||||||||||||
Sbjct: 717 cccatctcatgggttcagta 736

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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
              complete sequence
          Length = 136143

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 380    cccatctcatgggttcagta 399
              ||||||||||||||||||||
Sbjct: 119654 cccatctcatgggttcagta 119635

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>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0025P09, complete sequence
          Length = 167318

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  cccatctcatgggttcagta 399
            ||||||||||||||||||||
Sbjct: 2850 cccatctcatgggttcagta 2831

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>gb|AC160114.2| Mus musculus BAC clone RP24-70J8 from chromosome 13, complete sequence
          Length = 237699

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tcaaaatgatggcactgaat 469
             ||||||||||||||||||||
Sbjct: 65793 tcaaaatgatggcactgaat 65774

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>gb|AY395749.1| Drosophila melanogaster clone GH16 ATM protein-like (atm) mRNA,
           complete sequence
          Length = 4551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 agtgattttggtaatcatcc 374
           ||||||||||||||||||||
Sbjct: 213 agtgattttggtaatcatcc 194

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>gb|AY395748.1| Drosophila melanogaster clone LP4 ATM protein-like (atm) mRNA,
            complete sequence
          Length = 8449

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  agtgattttggtaatcatcc 374
            ||||||||||||||||||||
Sbjct: 4080 agtgattttggtaatcatcc 4061

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>gb|AC110622.6| Mus musculus BAC clone RP23-204H3 from chromosome 8, complete sequence
          Length = 190632

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   ataaatgaagacaaaataca 566
             ||||||||||||||||||||
Sbjct: 89505 ataaatgaagacaaaataca 89524

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>emb|BX842700.35| Zebrafish DNA sequence from clone DKEY-2P18 in linkage group 4, complete
              sequence
          Length = 198258

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    caaatatgcagtccagtgtt 250
              ||||||||||||||||||||
Sbjct: 127021 caaatatgcagtccagtgtt 127040

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>gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosome 7, complete sequence
          Length = 198721

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   gtgaaggcagagggtaaaca 326
             ||||||||||||||||||||
Sbjct: 11401 gtgaaggcagagggtaaaca 11382

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>gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, complete sequence
          Length = 140476

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   gtgaaggcagagggtaaaca 326
             ||||||||||||||||||||
Sbjct: 58640 gtgaaggcagagggtaaaca 58621

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>gb|AC124962.19| Medicago truncatula clone mth2-24d19, complete sequence
          Length = 126541

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 541   aaaatgataaatgaagacaaaata 564
             ||||||||||||||| ||||||||
Sbjct: 83330 aaaatgataaatgaacacaaaata 83353

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>gb|AC123975.16| Medicago truncatula clone mth2-12m13, complete sequence
          Length = 121884

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 541    aaaatgataaatgaagacaaaata 564
              ||||||||||||||| ||||||||
Sbjct: 115415 aaaatgataaatgaacacaaaata 115392

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>emb|AL353630.12| Human DNA sequence from clone RP11-37K5 on chromosome 9 Contains STSs
            and GSSs, complete sequence
          Length = 81566

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                            
Query: 244  cagtgttcattaattgcttctcgctttgggtt 275
            |||||||| |||||||||||| ||||||||||
Sbjct: 7092 cagtgttccttaattgcttct-gctttgggtt 7062

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>emb|AL158147.17| Human DNA sequence from clone RP11-125K10 on chromosome 9p24.1-24.3
             Contains the 3' end of the gene for RNA cyclase homolog
             (RNAC), a miR-101-precursor-9 micro RNA, a novel gene, a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene, the 5' UTR of the JAK2 gene for Janus kinase 2
             (a protein tyrosine kinase) and a CpG island, complete
             sequence
          Length = 172186

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   ccaggctgaggcagagcatt 502
             ||||||||||||||||||||
Sbjct: 46820 ccaggctgaggcagagcatt 46801

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>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
            Contains 3' end of the DAB1 gene for disabled homolog 1
            (Drosophila), a novel gene and the 5' end of a novel
            gene, complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 559  aaaatacaagttttaatcaa 578
            ||||||||||||||||||||
Sbjct: 8589 aaaatacaagttttaatcaa 8608

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>emb|AL645910.8| Mouse DNA sequence from clone RP23-173M6 on chromosome 11 Contains the 5'
              end of a novel gene, the Mtmr3 gene for myotubularin
              related protein 3 and a glyceraldehyde-3-phosphate
              dehydrogenase (Gapd) pseudogene, complete sequence
          Length = 204413

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 485    aggctgaggcagagcatttc 504
              ||||||||||||||||||||
Sbjct: 109082 aggctgaggcagagcatttc 109063

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>ref|NM_142178.1| Drosophila melanogaster telomere fusion CG6535-RA (tefu), mRNA
          Length = 7290

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  agtgattttggtaatcatcc 374
            ||||||||||||||||||||
Sbjct: 3052 agtgattttggtaatcatcc 3033

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>gb|AC009904.7| Drosophila melanogaster, chromosome 3R, region 88E-88E, BAC clone
              BACR32A03, complete sequence
          Length = 182601

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 355    agtgattttggtaatcatcc 374
              ||||||||||||||||||||
Sbjct: 147265 agtgattttggtaatcatcc 147284

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>tpg|BK004084.1| TPA: TPA_exp: Drosophila melanogaster telomere fusion protein (tefu)
            mRNA, complete cds
          Length = 8454

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 355  agtgattttggtaatcatcc 374
            ||||||||||||||||||||
Sbjct: 4085 agtgattttggtaatcatcc 4066

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 380      cccatctcatgggttcagta 399
                ||||||||||||||||||||
Sbjct: 17742896 cccatctcatgggttcagta 17742877

to top

>gb|AC073081.5| Homo sapiens BAC clone RP11-310H21 from 2, complete sequence
          Length = 118001

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   aaagggtgcaaggaatgaaa 613
             ||||||||||||||||||||
Sbjct: 17063 aaagggtgcaaggaatgaaa 17044

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>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the
             complete sequence
          Length = 236375

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   agtgattttggtaatcatcc 374
             ||||||||||||||||||||
Sbjct: 40731 agtgattttggtaatcatcc 40750

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>dbj|AK122261.1| Mus musculus mRNA for mKIAA0371 protein
          Length = 4642

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 485  aggctgaggcagagcatttc 504
            ||||||||||||||||||||
Sbjct: 1456 aggctgaggcagagcatttc 1475

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>gb|AC146616.3| Mus musculus BAC clone RP23-9A18 from 7, complete sequence
          Length = 198813

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   gtgaaggcagagggtaaaca 326
             ||||||||||||||||||||
Sbjct: 15529 gtgaaggcagagggtaaaca 15548

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>emb|AL731672.12| Mouse DNA sequence from clone RP23-161L11 on chromosome X, complete
             sequence
          Length = 232171

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 599   gtgcaaggaatgaaattttc 618
             ||||||||||||||||||||
Sbjct: 84012 gtgcaaggaatgaaattttc 83993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,504,231
Number of Sequences: 3902068
Number of extensions: 6504231
Number of successful extensions: 113867
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 113645
Number of HSP's gapped (non-prelim): 220
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result