| Clone Name | basd17n22 |
|---|---|
| Clone Library Name | barley_pub |
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +1 Query: 307 TKTSRSPLSQSLSQNQR*FQSRWSPRNPHALLAKTPPQGNRLGPVVALAAG 459 T S S L++SLS + SP + H+L ++PPQG R+ P + G Sbjct: 1182 TSRSLSSLNRSLSSGE---SGPGSPTHSHSLSPRSPPQGYRVAPDAVHSVG 1229
>NCKX4_HUMAN (Q8NFF2) Sodium/potassium/calcium exchanger 4 precursor| (Na(+)/K(+)/Ca(2+)-exchange protein 4) (Solute carrier family 24 member 4) Length = 605 Score = 30.4 bits (67), Expect = 3.2 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 4/28 (14%) Frame = -1 Query: 457 PPLERPPDP----ADFLAGVSLPTARGD 386 PP PP+P ADFL+ S+P ARGD Sbjct: 379 PPQPPPPEPEPVEADFLSPFSVPEARGD 406
>WRKY7_ARATH (Q9STX0) Probable WRKY transcription factor 7 (WRKY DNA-binding| protein 7) Length = 353 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/85 (23%), Positives = 37/85 (43%) Frame = +1 Query: 202 VNTRSRESSRLQVITRLNSSRH*ASTMNFRKFCPSTKTSRSPLSQSLSQNQR*FQSRWSP 381 V ++ V+T+ + ++ FR +CP+ R PLS + + NQ ++ S Sbjct: 115 VEVEEKKPETSSVLTKQKTEQYHGGGSAFRVYCPTPIHRRPPLSHNNNNNQNQTKNGSSS 174 Query: 382 RNPHALLAKTPPQGNRLGPVVALAA 456 +P +LA P P ++A Sbjct: 175 SSP-PMLANGAPSTINFAPSPPVSA 198
>PARG_DROME (O46043) Poly(ADP-ribose) glycohydrolase (EC 3.2.1.143)| Length = 768 Score = 29.6 bits (65), Expect = 5.4 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = -1 Query: 130 STVERSSTLLRATSKASSTCTEGAARTGARLSXWNXLDTH 11 S+VE S++ TSK SST T+ G +LS LDTH Sbjct: 689 SSVEISNS--STTSKTSSTATKSMGSGGRQLSLLEMLDTH 726
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 29.3 bits (64), Expect = 7.1 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = +1 Query: 214 SRESSRLQVITRLNS-SRH*ASTMNFRKFCPSTKTSRSPLSQSLSQNQR*FQSRWSPRNP 390 SR R + I+R S SR + + R + PS SRSP+ +S ++ +SR Sbjct: 670 SRSRGRRRSISRGRSYSRSVSGSSRGRSYTPSYSRSRSPVPKSRRRSVSYSRSRSPAGRR 729 Query: 391 HALLAKTPPQ 420 + +++TPP+ Sbjct: 730 RSSVSRTPPR 739
>POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3032 Score = 29.3 bits (64), Expect = 7.1 Identities = 26/72 (36%), Positives = 31/72 (43%) Frame = +2 Query: 245 RGSTLRGTEHPR*TSESSVQVRRPQGAHCRRA*ARTSDDSSHGGARGIPTRCWQRHPRKE 424 RG L G R TSE S +P+G R D S G A G P R W + + Sbjct: 39 RGPRL-GVRTTRKTSERS----QPRG----RRQPIPKDRRSTGKAWGKPGRPWPLYGNEG 89 Query: 425 IGWVRWSL*RRG 460 +GW W L RG Sbjct: 90 LGWAGWLLSPRG 101
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -2 Query: 162 PPEPLFVEMMIAPWKEVQRYYEPPQKPHRLVQKGQHEQEQDF 37 PP+ + M+ P + Q+ Y PPQ P Q+G Q++ F Sbjct: 456 PPQQHHPQFMVPPSHQQQQAYPPPQMPS---QQGYPPQQEHF 494
>UXUA_BURS3 (Q396Y9) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 352 Score = 28.9 bits (63), Expect = 9.2 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = -2 Query: 222 FSGSCVDTV----GIAGPGW*SSHPPEPLFVEMMIAPWKEV 112 FS VD + GIA PGW SS+ PE L + ++A +++V Sbjct: 127 FSTDAVDRIDPDDGIALPGWDSSYQPEQL--KALLAEYRDV 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,527,960 Number of Sequences: 219361 Number of extensions: 1447680 Number of successful extensions: 4402 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4219 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4402 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)