>ALMS1_MOUSE (Q8K4E0) Alstrom syndrome protein 1 homolog|
          Length = 3251

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 124  SLLFLVPKCPVCLHNKEELLPDERTVF 44
            SL+FL PK P+ L   +  LPD +T+F
Sbjct: 2246 SLVFLGPKSPLDLQVAQSSLPDSKTIF 2272

>KHSE_THEMA (Q9WZ15) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 281

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 124 SLLFLVPKCPVCLHNKEELLPDE 56
           SL FLVP  PVC +   ++LP++
Sbjct: 157 SLTFLVPNFPVCTNEMRKILPEK 179

>CLD9_HUMAN (O95484) Claudin-9|
          Length = 217

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 65  PGRADRLRGPRSGYSISSR 9
           P + +R RGPR GYSI SR
Sbjct: 187 PPQVERPRGPRLGYSIPSR 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,640,982
Number of Sequences: 219361
Number of extensions: 339861
Number of successful extensions: 1375
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 80,573,946
effective HSP length: 23
effective length of database: 75,528,643
effective search space used: 1812687432
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)