ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd18b21 |
|---|---|
| Clone Library Name | barley_pub |
>TBC13_HUMAN (Q9NVG8) TBC1 domain family member 13| Length = 275 Score = 84.7 bits (208), Expect = 2e-16 Identities = 48/148 (32%), Positives = 74/148 (50%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 SR + L + I L++LR L+ G+P G+R WK+LL+YLP +RA W LAK+ Sbjct: 7 SRIADFQDVLKEPSIALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQ 66 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 R Y F E + N + R ++ +DHPL+ S Sbjct: 67 RELYAQFLREMIIQP-----------------GIAKANMGVSREDVTFEDHPLNPNPDSR 109 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFF 446 WN + + +E++ Q+D+DV+R PD+ FF Sbjct: 110 WNTYFKDNEVLLQIDKDVRRLCPDISFF 137
>TBC13_MOUSE (Q8R3D1) TBC1 domain family member 13| Length = 400 Score = 83.6 bits (205), Expect = 5e-16 Identities = 48/148 (32%), Positives = 74/148 (50%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 SR + L + I L++LR L+ G+P G+R WK+LL+YLP +RA W LAK+ Sbjct: 7 SRIADFQDVLKEPSIVLEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAKQ 66 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 R Y F E + N + R ++ +DHPL+ S Sbjct: 67 RGLYSQFLREMIIQP-----------------GIAKANMGVFREDVTFEDHPLNPNPDSR 109 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFF 446 WN + + +E++ Q+D+DV+R PD+ FF Sbjct: 110 WNTYFKDNEVLLQIDKDVRRLCPDISFF 137 Score = 55.5 bits (132), Expect = 1e-07 Identities = 26/50 (52%), Positives = 35/50 (70%) Frame = +3 Query: 468 KSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFVFRNDPDYKNSVWK 617 +++ + + IL I+AKLN GI YVQGMNEI+ PL++ F DP NS WK Sbjct: 205 EAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDP---NSEWK 251
>TBCD5_HUMAN (Q92609) TBC1 domain family member 5| Length = 795 Score = 79.3 bits (194), Expect = 9e-15 Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 4/184 (2%) Frame = +3 Query: 51 LDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKKRSQYEAFKDEFLTNTV 230 L +R G + RS WKL L LP D++ W + + R+ Y K+ +TN Sbjct: 69 LATIRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISRIEELRAWYSNIKEIHITN-- 126 Query: 231 XXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDD----HPLSLGKTSEWNQFAEYSEIIE 398 R + Q D +PLS + S WN+F + E+ Sbjct: 127 -------------------------PRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRS 161 Query: 399 QVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFV 578 +++DVKRT P+M FF ++ + L ++L +A+ N + Y QGM+E+LAP+ FV Sbjct: 162 MIEQDVKRTFPEMQFFQQENV-----RKILTDVLFCYARENEQLLYKQGMHELLAPIVFV 216 Query: 579 FRND 590 D Sbjct: 217 LHCD 220
>TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5| Length = 815 Score = 78.2 bits (191), Expect = 2e-14 Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 4/184 (2%) Frame = +3 Query: 51 LDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKKRSQYEAFKDEFLTNTV 230 L +R G + RS WKL L LP D++ W ++ + R+ Y + K+ +TN Sbjct: 69 LATVRQKGINGQLRSSRFRSICWKLFLCVLPQDKSQWISKIKELRAWYSSIKEIHITN-- 126 Query: 231 XXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDD----HPLSLGKTSEWNQFAEYSEIIE 398 R Q D +PLS + S WN+F + E+ Sbjct: 127 -------------------------PRKAAGQQDLMINNPLSQDEGSLWNKFFQDKELRS 161 Query: 399 QVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFV 578 +++DVKRT P+M FF ++ + L ++L +A+ N + Y QGM+E+LAP+ F Sbjct: 162 MIEQDVKRTFPEMQFFQQENV-----RKILTDVLFCYARENEQLLYKQGMHELLAPIIFT 216 Query: 579 FRND 590 D Sbjct: 217 LHCD 220
>TB22B_HUMAN (Q9NU19) TBC1 domain family member 22B| Length = 505 Score = 49.3 bits (116), Expect = 1e-05 Identities = 48/196 (24%), Positives = 75/196 (38%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 +R + LS + DLDELR + GVP VR W+LL YLP + + L +K Sbjct: 184 TRLEKFRQLLSSQNTDLDELRKCSWPGVP--REVRPITWRLLSGYLPANTERRKLTLQRK 241 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 R +Y F +E + R+E Sbjct: 242 REEYFGF----------------------------IEQYYDSRNE--------------- 258 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQ 542 + + Q+ D+ RT+P + F Q+ IL I+A + YVQ Sbjct: 259 ----EHHQDTYRQIHIDIPRTNPLIPLF-----QQPLVQEIFERILFIWAIRHPASGYVQ 309 Query: 543 GMNEILAPLFFVFRND 590 G+N+++ P F VF ++ Sbjct: 310 GINDLVTPFFVVFLSE 325
>GYP1_YEAST (Q08484) GTPase-activating protein GYP1 (GAP for YPT1)| Length = 637 Score = 48.9 bits (115), Expect = 1e-05 Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 1/183 (0%) Frame = +3 Query: 36 KKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKKRSQY-EAFKDE 212 K +I+ +LR ++ G+P R VWKLL+ YLP + E L +KR +Y ++ K Sbjct: 265 KTIINQQDLRQISWNGIPKIH--RPVVWKLLIGYLPVNTKRQEGFLQRKRKEYRDSLKHT 322 Query: 213 FLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSEWNQFAEYSEI 392 F D H + W+Q Sbjct: 323 F------------------------------------SDQHSRDI---PTWHQ------- 336 Query: 393 IEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLF 572 ++ D+ RT+P + + KS Q+SL+ IL ++A + YVQG+N+++ P F Sbjct: 337 ---IEIDIPRTNPHIPLYQ-----FKSVQNSLQRILYLWAIRHPASGYVQGINDLVTPFF 388 Query: 573 FVF 581 F Sbjct: 389 ETF 391
>TB22B_MACFA (Q95LL3) TBC1 domain family member 22B| Length = 505 Score = 48.9 bits (115), Expect = 1e-05 Identities = 48/196 (24%), Positives = 74/196 (37%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 +R + LS DLDELR + GVP VR W+LL YLP + + L +K Sbjct: 184 TRLEKFRQLLSSHNTDLDELRKCSWPGVP--REVRPVTWRLLSGYLPANTERRKLTLQRK 241 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 R +Y F +E + R+E Sbjct: 242 REEYFGF----------------------------IEQYYDSRNE--------------- 258 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQ 542 + + Q+ D+ RT+P + F Q+ IL I+A + YVQ Sbjct: 259 ----EHHQDTYRQIHIDIPRTNPLIPLF-----QQPLVQEIFERILFIWAIRHPASGYVQ 309 Query: 543 GMNEILAPLFFVFRND 590 G+N+++ P F VF ++ Sbjct: 310 GINDLVTPFFVVFLSE 325
>TBC15_HUMAN (Q8TC07) TBC1 domain family member 15| Length = 691 Score = 44.7 bits (104), Expect = 2e-04 Identities = 41/186 (22%), Positives = 77/186 (41%) Frame = +3 Query: 39 KVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKKRSQYEAFKDEFL 218 +++++D ++ + +G A +R WK LL Y P D E+ +K+ E F+ + Sbjct: 331 RILNVDNMKQMIFRGGLSHA-LRKQAWKFLLGYFPWDSTKEERTQLQKQKTDEYFRMK-- 387 Query: 219 TNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSEWNQFAEYSEIIE 398 L I+Q+ + ++ +Y +IE Sbjct: 388 ----------------------------LQWKSISQEQEKRN-------SRLRDYRSLIE 412 Query: 399 QVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFV 578 +DV RT F+ G + L +IL+ + + + YVQGM+++L+PL +V Sbjct: 413 ---KDVNRTDRTNKFYEGQDN---PGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYV 466 Query: 579 FRNDPD 596 N+ D Sbjct: 467 MENEVD 472
>TBC16_HUMAN (Q8TBP0) TBC1 domain family member 16| Length = 767 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/65 (35%), Positives = 39/65 (60%) Frame = +3 Query: 402 VDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFVF 581 VD+DV RT + FF G+ + N +S+R IL+ +A N + Y QGM++++AP+ Sbjct: 488 VDKDVVRTDRNNQFFRGEDN---PNVESMRRILLNYAVYNPAVGYSQGMSDLVAPILAEV 544 Query: 582 RNDPD 596 ++ D Sbjct: 545 LDESD 549
>TB22A_MOUSE (Q8R5A6) TBC1 domain family member 22A| Length = 516 Score = 43.9 bits (102), Expect = 4e-04 Identities = 45/193 (23%), Positives = 70/193 (36%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 SR + L+ DL+ELR L+ G+P VR WKLL YLP + L +K Sbjct: 195 SRLDKFKQLLAGPNTDLEELRKLSWSGIPKP--VRPMTWKLLSGYLPANVDRRPATLQRK 252 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 + +Y AF + + ++ E+ QD + Sbjct: 253 QKEYFAFIEHYYSSR---------------------------NDEVHQDTY--------- 276 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQ 542 Q+ D+ R P+ + IL I+A + YVQ Sbjct: 277 -----------RQIHIDIPRMSPEALI------LQPKVTEIFERILFIWAIRHPASGYVQ 319 Query: 543 GMNEILAPLFFVF 581 G+N+++ P F VF Sbjct: 320 GINDLVTPFFVVF 332
>TBC17_MOUSE (Q8BYH7) TBC1 domain family member 17| Length = 645 Score = 43.1 bits (100), Expect = 7e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = +3 Query: 402 VDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFVF 581 ++RDV RT F+ G + S L +IL+ + + + YVQGM+++L+P+ FV Sbjct: 375 IERDVSRTDRTNKFYEGPENPGLS---LLHDILLTYCMYHFDLGYVQGMSDLLSPILFVV 431 Query: 582 RNDPDYKNSVWKLC 623 +N+ D + W C Sbjct: 432 QNEVD---AFWCFC 442
>TB22A_HUMAN (Q8WUA7) TBC1 domain family member 22A| Length = 517 Score = 43.1 bits (100), Expect = 7e-04 Identities = 45/193 (23%), Positives = 69/193 (35%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 SR + L+ DL+ELR L+ G+P VR WKLL YLP + L +K Sbjct: 196 SRLDKFKQLLAGPNTDLEELRRLSWSGIPKP--VRPMTWKLLSGYLPANVDRRPATLQRK 253 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 + +Y AF + + + E+ QD + Sbjct: 254 QKEYFAFIEHYYDSR---------------------------NDEVHQDTY--------- 277 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQ 542 Q+ D+ R P+ + IL I+A + YVQ Sbjct: 278 -----------RQIHIDIPRMSPEALI------LQPKVTEIFERILFIWAIRHPASGYVQ 320 Query: 543 GMNEILAPLFFVF 581 G+N+++ P F VF Sbjct: 321 GINDLVTPFFVVF 333
>TB22A_MACFA (Q95KI1) TBC1 domain family member 22A (Fragment)| Length = 497 Score = 42.7 bits (99), Expect = 0.001 Identities = 45/193 (23%), Positives = 69/193 (35%) Frame = +3 Query: 3 SRQSRILAALSKKVIDLDELRMLAAQGVPDGAGVRSTVWKLLLSYLPNDRALWEQELAKK 182 SR + L+ DL+ELR L+ G+P VR WKLL YLP + L +K Sbjct: 176 SRLDKFEQLLAGPNTDLEELRKLSWSGIPKP--VRPMTWKLLSGYLPANVDRRPATLQRK 233 Query: 183 RSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXXXXVENGFLDRSEIAQDDHPLSLGKTSE 362 + +Y AF + + + E+ QD + Sbjct: 234 QKEYFAFIEHYYDSR---------------------------NDEVHQDTY--------- 257 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQ 542 Q+ D+ R P+ + IL I+A + YVQ Sbjct: 258 -----------RQIHIDIPRMSPEALI------LQPKVTEIFERILFIWAIRHPASGYVQ 300 Query: 543 GMNEILAPLFFVF 581 G+N+++ P F VF Sbjct: 301 GINDLVTPFFVVF 313
>TBC17_HUMAN (Q9HA65) TBC1 domain family member 17| Length = 648 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/74 (29%), Positives = 40/74 (54%) Frame = +3 Query: 402 VDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFVF 581 ++RDV RT F+ G + L +IL+ + + + YVQGM+++L+P+ +V Sbjct: 375 IERDVSRTDRTNKFYEGPEN---PGLGLLNDILLTYCMYHFDLGYVQGMSDLLSPILYVI 431 Query: 582 RNDPDYKNSVWKLC 623 +N+ D + W C Sbjct: 432 QNEVD---AFWCFC 442
>GYP7_YARLI (P09379) GTPase-activating protein GYP7 (GAP for YPT7)| Length = 730 Score = 40.4 bits (93), Expect = 0.005 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 20/86 (23%) Frame = +3 Query: 393 IEQVDRDVKRTHPDMHFFC------------------GDSSFAKSNQD--SLRNILIIFA 512 + ++++DV RT ++ FF G SS SN LR++LI + Sbjct: 448 LSRIEKDVHRTDRNITFFAECDAKKDGDDDNYDKDEFGFSSQINSNIHLIQLRDMLITYN 507 Query: 513 KLNAGIRYVQGMNEILAPLFFVFRND 590 + N + YVQGM+++L+PL+ V ++D Sbjct: 508 QHNKNLGYVQGMSDLLSPLYVVLQDD 533
>TBC15_MOUSE (Q9CXF4) TBC1 domain family member 15| Length = 671 Score = 40.4 bits (93), Expect = 0.005 Identities = 37/165 (22%), Positives = 63/165 (38%) Frame = +3 Query: 102 VRSTVWKLLLSYLPNDRALWEQELAKKRSQYEAFKDEFLTNTVXXXXXXXXXXXXXXXXX 281 +R WK LL Y P D E+ +K+ E F+ + +V Sbjct: 334 LRKQAWKFLLGYFPWDSTKEERTQLQKQKTDEYFRMKLQWKSV----------------- 376 Query: 282 XXVENGFLDRSEIAQDDHPLSLGKTSEWNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSS 461 S + ++ +Y +IE +DV RT F+ G + Sbjct: 377 --------------------SEAQEKRNSRLRDYRSLIE---KDVNRTDRTNKFYEGQDN 413 Query: 462 FAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFVFRNDPD 596 L +IL+ + + + YVQGM+++L+PL +V N+ D Sbjct: 414 ---PGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVD 455
>GYP7_CANGA (Q6FWI1) GTPase-activating protein GYP7 (GAP for YPT7)| Length = 745 Score = 38.5 bits (88), Expect = 0.017 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +3 Query: 453 DSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEILAPLFFVFRND 590 D S N L +IL + N + YVQGM ++L+PL+++ R++ Sbjct: 492 DDSIKNPNLKKLADILTTYNIFNPNLGYVQGMTDLLSPLYYIIRDE 537
>GYP7_YEAST (P48365) GTPase-activating protein GYP7 (GAP for YPT7)| Length = 746 Score = 35.4 bits (80), Expect = 0.15 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +3 Query: 486 LRNILIIFAKLNAGIRYVQGMNEILAPLFFVFRND 590 L+NILI + N + YVQGM ++L+P++ + + + Sbjct: 513 LQNILITYNVYNTNLGYVQGMTDLLSPIYVIMKEE 547
>GYP7_DEBHA (Q6BU76) GTPase-activating protein GYP7 (GAP for YPT7)| Length = 757 Score = 35.4 bits (80), Expect = 0.15 Identities = 13/35 (37%), Positives = 25/35 (71%) Frame = +3 Query: 486 LRNILIIFAKLNAGIRYVQGMNEILAPLFFVFRND 590 +R IL+ + + N + YVQGM ++L+PL+ F+++ Sbjct: 520 MREILLTYNEHNVNLGYVQGMTDLLSPLYVTFQDE 554
>DPOG1_HUMAN (P54098) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial| DNA polymerase catalytic subunit) (PolG-alpha) Length = 1239 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -3 Query: 174 PTPAPKVHDHWADSSVAASTQSTGHRRRRGRPEPQASAAHRDLSPSSTAPRG 19 P PAP W SSV AS S G RRR+ + + Q + P + G Sbjct: 18 PVPAP---GRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEG 66
>MSB4_YEAST (Q12317) GTPase-activating protein MSB4 (Multicopy suppressor of| bud emergence 4) Length = 492 Score = 32.3 bits (72), Expect = 1.2 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%) Frame = +3 Query: 357 SEWNQFAEYSEIIEQVDRDVKRTHPD-MHFFCGDSSFAKSNQ---DSLRNILIIFAKLNA 524 S+ + A + +E ++RD+ RT PD +HF SF SLR +L+ F+ + Sbjct: 179 SDCREGAVSGKDMEAIERDLYRTFPDNIHFH--KESFQNGEPAIIRSLRRVLMAFSVYDK 236 Query: 525 GIRYVQGMNEILAPLFFVFRNDPDYKNSVWKL 620 I Y Q MN L L +F + + + W L Sbjct: 237 TIGYCQSMN-FLVGLLLLFMEE---EKAFWML 264
>YQ01_CAEEL (Q09445) Hypothetical protein C04A2.1 in chromosome II| Length = 330 Score = 31.2 bits (69), Expect = 2.8 Identities = 18/76 (23%), Positives = 33/76 (43%) Frame = +3 Query: 363 WNQFAEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQ 542 W + E+I+Q+ D+ RT PD F + + +L L A+ + Y Q Sbjct: 100 WQRHEVPDEVIKQIKLDLPRTFPDNKFL-----KTEGTRKTLGRALFAVAEHIPSVGYCQ 154 Query: 543 GMNEILAPLFFVFRND 590 G+N + + V ++ Sbjct: 155 GLNFVAGVILLVVNDE 170
>RPGF3_HUMAN (O95398) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) (Rap1 guanine-nucleotide-exchange factor directly activated by cAMP) Length = 881 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 8/88 (9%) Frame = -3 Query: 459 KSLHRRNACQGECVLHHGQPARLSLNTQQTDSIRWSSQGSKDDHLGLSPTCQETHSRRAL 280 + +HR +C + +L H +P+ + +RW+ + ++ L S + ++ + R L Sbjct: 4 RRMHRPRSCSYQLLLEHQRPSCI-------QGLRWTPLTNSEESLDFSESLEQASTERVL 56 Query: 279 HF---RHRGLL-----ILQPRYFHLQCW 220 HR LL +++ R +HL+ + Sbjct: 57 RAGRQLHRHLLATCPNLIRDRKYHLRLY 84
>TBC12_HUMAN (O60347) TBC1 domain family member 12| Length = 769 Score = 30.8 bits (68), Expect = 3.6 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%) Frame = +3 Query: 375 AEYSEIIEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNE 554 A+ +E + D+ RT P ++ F + D L +IL + + YVQGM+ Sbjct: 532 ADREASLELIKLDISRTFPSLYIFQKGGPY----HDVLHSILGAYTCYRPDVGYVQGMSF 587 Query: 555 ILAPLFFVFRNDP---DYKNSVWKLCRSRFF 638 I A L + N + K C+ FF Sbjct: 588 IAAVLILNLEEADAFIAFANLLNKPCQLAFF 618
>TBC14_MOUSE (Q8CGA2) TBC1 domain family member 14| Length = 679 Score = 30.4 bits (67), Expect = 4.7 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Frame = +3 Query: 339 LSLGKTSEWNQFAEYSEI-----IEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILI 503 LS G + N+ A +S +E + D+ RT P++ F + D L +IL Sbjct: 426 LSTGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPY----HDMLHSILG 481 Query: 504 IFAKLNAGIRYVQGMNEILAPLFFVFRNDP---DYKNSVWKLCRSRFF 638 + + YVQGM+ I A L + N + K C+ FF Sbjct: 482 AYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFF 529
>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Protein rutabaga) Length = 2248 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/78 (25%), Positives = 33/78 (42%) Frame = -3 Query: 459 KSLHRRNACQGECVLHHGQPARLSLNTQQTDSIRWSSQGSKDDHLGLSPTCQETHSRRAL 280 K L+ +A G+ HH QP R ++ +++S + + Q+ H R Sbjct: 1899 KELNGSHAHHGQ---HHQQPQRTHRQRPRSKELQYSHESLDGLDGAVQSQSQQRHQRYHH 1955 Query: 279 HFRHRGLLILQPRYFHLQ 226 H H+ Q RY H+Q Sbjct: 1956 HHHHQQRQQQQQRYNHVQ 1973
>TBC14_HUMAN (Q9P2M4) TBC1 domain family member 14| Length = 678 Score = 30.4 bits (67), Expect = 4.7 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%) Frame = +3 Query: 339 LSLGKTSEWNQFAEYSEI-----IEQVDRDVKRTHPDMHFFCGDSSFAKSNQDSLRNILI 503 LS G + N+ A +S +E + D+ RT P++ F + D L +IL Sbjct: 425 LSTGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPY----HDMLHSILG 480 Query: 504 IFAKLNAGIRYVQGMNEILAPLFFVFRNDP---DYKNSVWKLCRSRFF 638 + + YVQGM+ I A L + N + K C+ FF Sbjct: 481 AYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFF 528
>PE2R4_MOUSE (P32240) Prostaglandin E2 receptor, EP4 subtype (Prostanoid EP4| receptor) (PGE receptor, EP4 subtype) Length = 513 Score = 30.0 bits (66), Expect = 6.2 Identities = 28/85 (32%), Positives = 38/85 (44%) Frame = -3 Query: 549 SFLARILSQHSAWQR*LIYFSENPDLTLQKKSLHRRNACQGECVLHHGQPARLSLNTQQT 370 SFLAR L + S+ + L+Y PDLT + SL RN G + Q SL T + Sbjct: 407 SFLARELKEISSTSQTLLYL---PDLT--ESSLGGRNLLPGSHGMGLTQADTTSLRTLRI 461 Query: 369 DSIRWSSQGSKDDHLGLSPTCQETH 295 SSQG + + L +H Sbjct: 462 SETSDSSQGQDSESVLLVDEVSGSH 486
>RPOC_PSEPF (Q3K5Y2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1399 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 Query: 450 GDSSFAKSNQDSLRNILIIFAKLNAGIRYVQGMNEIL 560 GDSSF K +Q L ++L+ +LNA ++V +L Sbjct: 1270 GDSSFIKGDQMELTHVLVENERLNAEDKFVSKFTRVL 1306
>BUB2_YEAST (P26448) Mitotic check point protein BUB2 (Cell cycle arrest| protein BUB2) Length = 306 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +3 Query: 534 YVQGMNEILAPLFFVFRNDPDYKNSVWKLC 623 YVQGMN +LAPL + ++P KLC Sbjct: 130 YVQGMNVLLAPLLYSCPSEPMAYQLFTKLC 159
>POL_COYMV (P19199) Putative polyprotein [Contains: Coat protein; Protease (EC| 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 1886 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Frame = -3 Query: 483 NPDLTLQKKSLHRRNACQGECVLH--HGQPARLSLNTQQTDSIRWSSQGSKDDHLGLSPT 310 NP++ LQ+ HR A E + HG + + +++ GS+ D + + Sbjct: 69 NPEVQLQRSMNHRAEAVPAEVLYRTFHGS-VNHRVYSHRSEERMMVVNGSQVDRSFIQES 127 Query: 309 CQETHSRRALHFRHRGLLILQPRYFH 232 E SR + F H G+++++ + H Sbjct: 128 SFEVLSRTGIEFIHIGVMLVRIQILH 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,249,684 Number of Sequences: 219361 Number of extensions: 1862180 Number of successful extensions: 5843 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5638 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5823 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
