ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd18b21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 276 9e-71
2dbj|AK105143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 8e-65
3ref|XM_463585.1| Oryza sativa (japonica cultivar-group), predic... 248 2e-62
4gb|BT018106.1| Zea mays clone EL01N0553D05.c mRNA sequence 202 1e-48
5dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
8dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
9gb|DQ284471.1| Solanum tuberosum clone 110F03 RabGAP/TBC domain-... 94 7e-16
10gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete s... 74 6e-10
11gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete s... 62 2e-06
12gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete s... 62 2e-06
13ref|XM_472208.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
14gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete ... 56 1e-04
15emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
17dbj|AK109611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
18gb|AC091252.3| Bos taurus clone RP42-324C24, complete sequence 44 0.57
19gb|DP000008.1| Bos taurus target 1 genomic scaffold 44 0.57
20ref|XM_724262.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 44 0.57
21ref|XM_672643.1| Plasmodium berghei strain ANKA hypothetical pro... 44 0.57
22gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, comp... 44 0.57
23gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete s... 44 0.57
24gb|AC156366.3| Bos taurus clone RP42-304J18, complete sequence 44 0.57
25emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on ch... 44 0.57
26emb|Z68117.1|CEF45E6 Caenorhabditis elegans Cosmid F45E6, comple... 42 2.2
27gb|AC004131.1|HUAC004131 Homo sapiens Chromosome 16 BAC clone CI... 42 2.2
28ref|NM_077694.2| Caenorhabditis elegans F45E6.3 (F45E6.3) mRNA, ... 42 2.2
29gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380... 42 2.2
30gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, comp... 42 2.2
31gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.8
32gb|AC132385.5| Mus musculus BAC clone RP23-438F21 from chromosom... 40 8.8
33gb|BT013271.1| Lycopersicon esculentum clone 134844R, mRNA sequence 40 8.8
34emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chr... 40 8.8
35gb|AC134174.1| Drosophila pseudoobscura FOSMID DPSF1-548A7 (Chi... 40 8.8
36emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.8
37emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 8.8
38gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, co... 40 8.8
39emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in... 40 8.8
40gb|AC132370.9| Mus musculus BAC clone RP23-471F3 from chromosome... 40 8.8
41gb|AC000360.35| Homo sapiens Chromosome 2 BAC Clone 376a1, compl... 40 8.8
42gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, compl... 40 8.8
43gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, comple... 40 8.8
44gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 40 8.8
45gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28... 40 8.8
46gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.8
47dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 8.8
48dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.8
49emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 ... 40 8.8
50gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, co... 40 8.8
51gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Syst... 40 8.8
52dbj|AP003784.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.8 
>dbj|AK072293.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023017P18, full
           insert sequence
          Length = 1304

 Score =  276 bits (139), Expect = 9e-71
 Identities = 266/309 (86%), Gaps = 7/309 (2%)
 Strand = Plus / Plus

                                                                       
Query: 339 ttgagccttgggaagaccagcgaatggaatcagtttgctgagtattcagagataatcgag 398
           ||||||||||||||||| |  | ||||||||||||   ||||||||||||||| ||||||
Sbjct: 421 ttgagccttgggaagacaactgcatggaatcagttctttgagtattcagagattatcgag 480

                                                                       
Query: 399 caggttgaccgtgatgtaaaacgcactcaccctgacatgcatttcttctgtggagactct 458
           ||  ||||||||||||| || ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 481 caaattgaccgtgatgtgaagcgcactcaccctgacatgcattttttctgtggagactca 540

                                                                       
Query: 459 tcttttgcaaagtcaaatcaggattctctgagaaatatattaatcatctttgccaagctg 518
           |||||||||||||| |||||||| ||||||| ||||||| | || |||||||| ||||||
Sbjct: 541 tcttttgcaaagtccaatcaggaatctctgaaaaatatactgattatctttgcaaagctg 600

                                                                       
Query: 519 aatgctgggataagatacgtgcaaggaatgaatgaaattttggcgccactcttctttgta 578
           ||||| || ||| | || || ||||| ||||||||||||||||| || ||||||||||| 
Sbjct: 601 aatgccggaatacgttatgtacaagggatgaatgaaattttggcacctctcttctttgtg 660

                                                                       
Query: 579 tttcggaatgatccagattataaaaattctgtatggaaactttgccgaagccgattcttt 638
           |||||||||||||||||| |||||||| ||       |||||||| ||||| ||||||||
Sbjct: 661 tttcggaatgatccagatgataaaaatgct-------aactttgcagaagctgattcttt 713

                    
Query: 639 cttttgctt 647
           ||| |||||
Sbjct: 714 cttctgctt 722



 Score =  204 bits (103), Expect = 3e-49
 Identities = 193/223 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   ctcgcgccagtcccgtatcctcgcggcgctgtcgaagaaggtgatagatctcgatgagct 61
           |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 87  ctcgcggcagtcccgtctcctcgcggcgctgtccaagaaggtgatagatctcgatgagct 146

                                                                       
Query: 62  gcggatgcttgcggctcagggcgtccccgacggcgccggtgtccggtcgactgtgtggaa 121
           | ||||||| || |||||||| ||||| ||||||||||  |||||  | |||||||||||
Sbjct: 147 gaggatgctggctgctcagggggtccctgacggcgccgccgtccgtcctactgtgtggaa 206

                                                                       
Query: 122 gctgctactgagctatctgcccaatgatcgtgcactttgggagcaggagttggcaaaaaa 181
           |||| | ||| ||||| |||| | ||||||||| || |||||||||||||||||||| ||
Sbjct: 207 gctgttgctgggctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaa 266

                                                      
Query: 182 gaggtcacaatatgaagccttcaaagacgagttccttaccaac 224
           ||| ||||| || | |||||| ||||| || ||||||| ||||
Sbjct: 267 gagatcacagtacgcagcctttaaagaagaattccttagcaac 309
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>dbj|AK105143.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-B07, full
           insert sequence
          Length = 858

 Score =  256 bits (129), Expect = 8e-65
 Identities = 235/271 (86%), Gaps = 7/271 (2%)
 Strand = Plus / Plus

                                                                       
Query: 377 tgagtattcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacat 436
           ||||||||||||||| ||||||||  ||||||||||||| || |||||||||||||||||
Sbjct: 13  tgagtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacat 72

                                                                       
Query: 437 gcatttcttctgtggagactcttcttttgcaaagtcaaatcaggattctctgagaaatat 496
           |||||| |||||||||||||| |||||||||||||| |||||||| ||||||| ||||||
Sbjct: 73  gcattttttctgtggagactcatcttttgcaaagtccaatcaggaatctctgaaaaatat 132

                                                                       
Query: 497 attaatcatctttgccaagctgaatgctgggataagatacgtgcaaggaatgaatgaaat 556
           | | || |||||||| ||||||||||| || ||| | || || ||||| |||||||||||
Sbjct: 133 actgattatctttgcaaagctgaatgccggaatacgttatgtacaagggatgaatgaaat 192

                                                                       
Query: 557 tttggcgccactcttctttgtatttcggaatgatccagattataaaaattctgtatggaa 616
           |||||| || ||||||||||| |||||||||||||||||| |||||||| ||       |
Sbjct: 193 tttggcacctctcttctttgtgtttcggaatgatccagatgataaaaatgct-------a 245

                                          
Query: 617 actttgccgaagccgattctttcttttgctt 647
           ||||||| ||||| ||||||||||| |||||
Sbjct: 246 actttgcagaagctgattctttcttctgctt 276
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>ref|XM_463585.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score =  248 bits (125), Expect = 2e-62
 Identities = 231/267 (86%), Gaps = 7/267 (2%)
 Strand = Plus / Plus

                                                                       
Query: 381 tattcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacatgcat 440
           ||||||||||| ||||||||  ||||||||||||| || |||||||||||||||||||||
Sbjct: 418 tattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgcat 477

                                                                       
Query: 441 ttcttctgtggagactcttcttttgcaaagtcaaatcaggattctctgagaaatatatta 500
           || |||||||||||||| |||||||||||||| |||||||| ||||||| ||||||| | 
Sbjct: 478 tttttctgtggagactcatcttttgcaaagtccaatcaggaatctctgaaaaatatactg 537

                                                                       
Query: 501 atcatctttgccaagctgaatgctgggataagatacgtgcaaggaatgaatgaaattttg 560
           || |||||||| ||||||||||| || ||| | || || ||||| |||||||||||||||
Sbjct: 538 attatctttgcaaagctgaatgccggaatacgttatgtacaagggatgaatgaaattttg 597

                                                                       
Query: 561 gcgccactcttctttgtatttcggaatgatccagattataaaaattctgtatggaaactt 620
           || || ||||||||||| |||||||||||||||||| |||||||| ||       |||||
Sbjct: 598 gcacctctcttctttgtgtttcggaatgatccagatgataaaaatgct-------aactt 650

                                      
Query: 621 tgccgaagccgattctttcttttgctt 647
           ||| ||||| ||||||||||| |||||
Sbjct: 651 tgcagaagctgattctttcttctgctt 677



 Score =  167 bits (84), Expect = 6e-38
 Identities = 168/196 (85%)
 Strand = Plus / Plus

                                                                       
Query: 29  gctgtcgaagaaggtgatagatctcgatgagctgcggatgcttgcggctcagggcgtccc 88
           |||||| ||||||||||||||||||||||||||| ||||||| || |||||||| |||||
Sbjct: 219 gctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccc 278

                                                                       
Query: 89  cgacggcgccggtgtccggtcgactgtgtggaagctgctactgagctatctgcccaatga 148
            ||||||||||  |||||  | ||||||||||||||| | ||| ||||| |||| | |||
Sbjct: 279 tgacggcgccgccgtccgtcctactgtgtggaagctgttgctgggctatttgccgagtga 338

                                                                       
Query: 149 tcgtgcactttgggagcaggagttggcaaaaaagaggtcacaatatgaagccttcaaaga 208
           |||||| || |||||||||||||||||||| ||||| ||||| || | |||||| |||||
Sbjct: 339 tcgtgccctgtgggagcaggagttggcaaagaagagatcacagtacgcagcctttaaaga 398

                           
Query: 209 cgagttccttaccaac 224
            || ||||||| ||||
Sbjct: 399 agaattccttagcaac 414
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>gb|BT018106.1| Zea mays clone EL01N0553D05.c mRNA sequence
          Length = 1626

 Score =  202 bits (102), Expect = 1e-48
 Identities = 237/280 (84%), Gaps = 4/280 (1%)
 Strand = Plus / Plus

                                                                       
Query: 336 cctttgagccttgggaagaccagcgaatggaatcagtttgctgagtattcagagataatc 395
           ||||| ||||||||||||||||| |  ||||||||||||  |||||| || ||||| || 
Sbjct: 520 cctttaagccttgggaagaccagtgcttggaatcagttttttgagtactcggagattatg 579

                                                                       
Query: 396 gagcaggttgaccgtgatgtaaaacgcactcaccctgacatgcatttcttctgtggagac 455
           |||||| ||||||| |||||||| ||| | |||||||||||||||||||||||| | |||
Sbjct: 580 gagcagattgaccgcgatgtaaagcgcgcccaccctgacatgcatttcttctgtagcgac 639

                                                                       
Query: 456 tcttcttttgcaaagtcaaatcaggattctctgagaaatatattaatcatctttgccaag 515
           || |||||||||||||| |||||||| ||| ||| ||||  | |  | ||||||||||||
Sbjct: 640 tcgtcttttgcaaagtccaatcaggaatctttgaaaaatgcactgttaatctttgccaag 699

                                                                       
Query: 516 ctgaatgctgggataagatacgtgcaaggaatgaatgaaattttggcgccactcttcttt 575
           ||||||||||| ||| |||| || ||||| |||||||||||| |||| || |   |||||
Sbjct: 700 ctgaatgctggaataggatatgtacaagg-atgaatgaaattctggcaccgc---tcttt 755

                                                   
Query: 576 gtatttcggaatgatccagattataaaaattctgtatgga 615
           |||||||||| |||||| ||| |||||||| |||||||||
Sbjct: 756 gtatttcggagtgatccggatgataaaaatgctgtatgga 795



 Score =  103 bits (52), Expect = 7e-19
 Identities = 109/127 (85%), Gaps = 2/127 (1%)
 Strand = Plus / Plus

                                                                       
Query: 24  gcggcgctgtcgaagaaggtgataga--tctcgatgagctgcggatgcttgcggctcagg 81
           |||||| |||| |||||||||||| |  ||||||||| ||| ||||||| ||||||||||
Sbjct: 133 gcggcgttgtccaagaaggtgatataggtctcgatgaactgaggatgctggcggctcagg 192

                                                                       
Query: 82  gcgtccccgacggcgccggtgtccggtcgactgtgtggaagctgctactgagctatctgc 141
           | ||||| ||||  || || |||| | |||| |||||||||||||||||| |||||||||
Sbjct: 193 gagtcccagacgcggcgggcgtccaggcgaccgtgtggaagctgctactgggctatctgc 252

                  
Query: 142 ccaatga 148
           |||||||
Sbjct: 253 ccaatga 259
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>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0497A05
          Length = 130919

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                         
Query: 379   agtattcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacatgc 438
             ||||||||||||| ||||||||  ||||||||||||| || |||||||||||||||||||
Sbjct: 87246 agtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgc 87187

                                                       
Query: 439   atttcttctgtggagactcttcttttgcaaagtcaaatcagg 480
             |||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 87186 attttttctgtggagactcatcttttgcaaagtccaatcagg 87145



 Score =  133 bits (67), Expect = 8e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                         
Query: 477   caggattctctgagaaatatattaatcatctttgccaagctgaatgctgggataagatac 536
             ||||| ||||||| ||||||| | || |||||||| ||||||||||| || ||| | || 
Sbjct: 87076 caggaatctctgaaaaatatactgattatctttgcaaagctgaatgccggaatacgttat 87017

                                                                         
Query: 537   gtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaatgatccagat 596
             || ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 87016 gtacaagggatgaatgaaattttggcacctctcttctttgtgtttcggaatgatccagat 86957

                                
Query: 597   tataaaaattctgtatgga 615
              |||||||| |||||||||
Sbjct: 86956 gataaaaatgctgtatgga 86938



 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                         
Query: 29    gctgtcgaagaaggtgatagatctcgatgagctgcggatgcttgcggctcagggcgtccc 88
             |||||| ||||||||||||||||||||||||||| ||||||| || |||||||| |||||
Sbjct: 88581 gctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccc 88522

                                                    
Query: 89    cgacggcgccggtgtccggtcgactgtgtggaagctgct 127
              ||||||||||  |||||  | |||||||||||| ||||
Sbjct: 88521 tgacggcgccgccgtccgtcctactgtgtggaaggtgct 88483



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 133   gctatctgcccaatgatcgtgcactttgggagcaggagttggcaaaaaagaggtcacaat 192
             ||||| |||| | ||||||||| || |||||||||||||||||||| ||||| ||||| |
Sbjct: 88107 gctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaagagatcacagt 88048

                                                   
Query: 193   atgaagccttcaaagacgagttccttaccaacactgta 230
             | | |||||| ||||| || ||||||| |||| |||||
Sbjct: 88047 acgcagcctttaaagaagaattccttagcaaccctgta 88010



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 2     ctcgcgccagtcccgtatcctcgcggcg 29
             |||||| ||||||||| |||||||||||
Sbjct: 88712 ctcgcggcagtcccgtctcctcgcggcg 88685



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 616   aactttgccgaagccgattctttcttttgctt 647
             |||||||| ||||| ||||||||||| |||||
Sbjct: 86796 aactttgcagaagctgattctttcttctgctt 86765
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                            
Query: 379      agtattcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacatgc 438
                ||||||||||||| ||||||||  ||||||||||||| || |||||||||||||||||||
Sbjct: 39532804 agtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgc 39532745

                                                          
Query: 439      atttcttctgtggagactcttcttttgcaaagtcaaatcagg 480
                |||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 39532744 attttttctgtggagactcatcttttgcaaagtccaatcagg 39532703



 Score =  133 bits (67), Expect = 8e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                            
Query: 477      caggattctctgagaaatatattaatcatctttgccaagctgaatgctgggataagatac 536
                ||||| ||||||| ||||||| | || |||||||| ||||||||||| || ||| | || 
Sbjct: 39532634 caggaatctctgaaaaatatactgattatctttgcaaagctgaatgccggaatacgttat 39532575

                                                                            
Query: 537      gtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaatgatccagat 596
                || ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 39532574 gtacaagggatgaatgaaattttggcacctctcttctttgtgtttcggaatgatccagat 39532515

                                   
Query: 597      tataaaaattctgtatgga 615
                 |||||||| |||||||||
Sbjct: 39532514 gataaaaatgctgtatgga 39532496



 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                            
Query: 29       gctgtcgaagaaggtgatagatctcgatgagctgcggatgcttgcggctcagggcgtccc 88
                |||||| ||||||||||||||||||||||||||| ||||||| || |||||||| |||||
Sbjct: 39534139 gctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccc 39534080

                                                       
Query: 89       cgacggcgccggtgtccggtcgactgtgtggaagctgct 127
                 ||||||||||  |||||  | |||||||||||| ||||
Sbjct: 39534079 tgacggcgccgccgtccgtcctactgtgtggaaggtgct 39534041



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 133      gctatctgcccaatgatcgtgcactttgggagcaggagttggcaaaaaagaggtcacaat 192
                ||||| |||| | ||||||||| || |||||||||||||||||||| ||||| ||||| |
Sbjct: 39533665 gctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaagagatcacagt 39533606

                                                      
Query: 193      atgaagccttcaaagacgagttccttaccaacactgta 230
                | | |||||| ||||| || ||||||| |||| |||||
Sbjct: 39533605 acgcagcctttaaagaagaattccttagcaaccctgta 39533568



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 2        ctcgcgccagtcccgtatcctcgcggcg 29
                |||||| ||||||||| |||||||||||
Sbjct: 39534270 ctcgcggcagtcccgtctcctcgcggcg 39534243



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 616      aactttgccgaagccgattctttcttttgctt 647
                |||||||| ||||| ||||||||||| |||||
Sbjct: 39532354 aactttgcagaagctgattctttcttctgctt 39532323
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>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456E05
          Length = 173699

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                         
Query: 379   agtattcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacatgc 438
             ||||||||||||| ||||||||  ||||||||||||| || |||||||||||||||||||
Sbjct: 13760 agtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgc 13701

                                                       
Query: 439   atttcttctgtggagactcttcttttgcaaagtcaaatcagg 480
             |||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 13700 attttttctgtggagactcatcttttgcaaagtccaatcagg 13659



 Score =  133 bits (67), Expect = 8e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                         
Query: 477   caggattctctgagaaatatattaatcatctttgccaagctgaatgctgggataagatac 536
             ||||| ||||||| ||||||| | || |||||||| ||||||||||| || ||| | || 
Sbjct: 13590 caggaatctctgaaaaatatactgattatctttgcaaagctgaatgccggaatacgttat 13531

                                                                         
Query: 537   gtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaatgatccagat 596
             || ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 13530 gtacaagggatgaatgaaattttggcacctctcttctttgtgtttcggaatgatccagat 13471

                                
Query: 597   tataaaaattctgtatgga 615
              |||||||| |||||||||
Sbjct: 13470 gataaaaatgctgtatgga 13452



 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                         
Query: 29    gctgtcgaagaaggtgatagatctcgatgagctgcggatgcttgcggctcagggcgtccc 88
             |||||| ||||||||||||||||||||||||||| ||||||| || |||||||| |||||
Sbjct: 15095 gctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccc 15036

                                                    
Query: 89    cgacggcgccggtgtccggtcgactgtgtggaagctgct 127
              ||||||||||  |||||  | |||||||||||| ||||
Sbjct: 15035 tgacggcgccgccgtccgtcctactgtgtggaaggtgct 14997



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 133   gctatctgcccaatgatcgtgcactttgggagcaggagttggcaaaaaagaggtcacaat 192
             ||||| |||| | ||||||||| || |||||||||||||||||||| ||||| ||||| |
Sbjct: 14621 gctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaagagatcacagt 14562

                                                   
Query: 193   atgaagccttcaaagacgagttccttaccaacactgta 230
             | | |||||| ||||| || ||||||| |||| |||||
Sbjct: 14561 acgcagcctttaaagaagaattccttagcaaccctgta 14524



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 2     ctcgcgccagtcccgtatcctcgcggcg 29
             |||||| ||||||||| |||||||||||
Sbjct: 15226 ctcgcggcagtcccgtctcctcgcggcg 15199



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 616   aactttgccgaagccgattctttcttttgctt 647
             |||||||| ||||| ||||||||||| |||||
Sbjct: 13310 aactttgcagaagctgattctttcttctgctt 13279
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>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1417F08
          Length = 155536

 Score =  139 bits (70), Expect = 1e-29
 Identities = 94/102 (92%)
 Strand = Plus / Minus

                                                                          
Query: 379    agtattcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacatgc 438
              ||||||||||||| ||||||||  ||||||||||||| || |||||||||||||||||||
Sbjct: 107818 agtattcagagattatcgagcaaattgaccgtgatgtgaagcgcactcaccctgacatgc 107759

                                                        
Query: 439    atttcttctgtggagactcttcttttgcaaagtcaaatcagg 480
              |||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 107758 attttttctgtggagactcatcttttgcaaagtccaatcagg 107717



 Score =  133 bits (67), Expect = 8e-28
 Identities = 121/139 (87%)
 Strand = Plus / Minus

                                                                          
Query: 477    caggattctctgagaaatatattaatcatctttgccaagctgaatgctgggataagatac 536
              ||||| ||||||| ||||||| | || |||||||| ||||||||||| || ||| | || 
Sbjct: 107648 caggaatctctgaaaaatatactgattatctttgcaaagctgaatgccggaatacgttat 107589

                                                                          
Query: 537    gtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaatgatccagat 596
              || ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 107588 gtacaagggatgaatgaaattttggcacctctcttctttgtgtttcggaatgatccagat 107529

                                 
Query: 597    tataaaaattctgtatgga 615
               |||||||| |||||||||
Sbjct: 107528 gataaaaatgctgtatgga 107510



 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                          
Query: 29     gctgtcgaagaaggtgatagatctcgatgagctgcggatgcttgcggctcagggcgtccc 88
              |||||| ||||||||||||||||||||||||||| ||||||| || |||||||| |||||
Sbjct: 109153 gctgtccaagaaggtgatagatctcgatgagctgaggatgctggctgctcagggggtccc 109094

                                                     
Query: 89     cgacggcgccggtgtccggtcgactgtgtggaagctgct 127
               ||||||||||  |||||  | |||||||||||| ||||
Sbjct: 109093 tgacggcgccgccgtccgtcctactgtgtggaaggtgct 109055



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                          
Query: 133    gctatctgcccaatgatcgtgcactttgggagcaggagttggcaaaaaagaggtcacaat 192
              ||||| |||| | ||||||||| || |||||||||||||||||||| ||||| ||||| |
Sbjct: 108679 gctatttgccgagtgatcgtgccctgtgggagcaggagttggcaaagaagagatcacagt 108620

                                                    
Query: 193    atgaagccttcaaagacgagttccttaccaacactgta 230
              | | |||||| ||||| || ||||||| |||| |||||
Sbjct: 108619 acgcagcctttaaagaagaattccttagcaaccctgta 108582



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 2      ctcgcgccagtcccgtatcctcgcggcg 29
              |||||| ||||||||| |||||||||||
Sbjct: 109284 ctcgcggcagtcccgtctcctcgcggcg 109257



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 616    aactttgccgaagccgattctttcttttgctt 647
              |||||||| ||||| ||||||||||| |||||
Sbjct: 107368 aactttgcagaagctgattctttcttctgctt 107337
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>gb|DQ284471.1| Solanum tuberosum clone 110F03 RabGAP/TBC domain-containing
            protein-like mRNA, complete cds
          Length = 1830

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 110/131 (83%)
 Strand = Plus / Plus

                                                                        
Query: 462  tttgcaaagtcaaatcaggattctctgagaaatatattaatcatctttgccaagctgaat 521
            |||||||| || || |||||||||||||| |||||| | || || |||||||| || |||
Sbjct: 1043 tttgcaaaatctaaccaggattctctgaggaatatactcattatttttgccaaactcaat 1102

                                                                        
Query: 522  gctgggataagatacgtgcaaggaatgaatgaaattttggcgccactcttctttgtattt 581
             |||| |||||||| |||||||| ||||||||| | ||||| ||||| |||| |||||| 
Sbjct: 1103 cctggtataagatatgtgcaagggatgaatgaagtattggctccactattctatgtattc 1162

                       
Query: 582  cggaatgatcc 592
             ||||||||||
Sbjct: 1163 aggaatgatcc 1173
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>gb|AC182658.2| Populus trichocarpa clone Pop1-124E10, complete sequence
          Length = 99811

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                         
Query: 384   tcagagataatcgagcaggttgaccgtgatgtaaaacgcactcaccctgacatgcatttc 443
             |||||||| || |||||| |||| || ||||| |||||||||||||| |||||||| |||
Sbjct: 97053 tcagagattatagagcagattgatcgagatgtgaaacgcactcacccggacatgcacttc 97112

                                                  
Query: 444   ttctgtggagactcttcttttgcaaagtcaaatcagg 480
             || | ||| ||||| || |||||||| || |||||||
Sbjct: 97113 ttttctggggactcatcatttgcaaaatccaatcagg 97149



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 333   catcctttgagccttgggaagaccagc 359
             |||||||||||||||||||||| ||||
Sbjct: 96437 catcctttgagccttgggaagagcagc 96463
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>gb|AC145021.14| Medicago truncatula clone mth2-23a16, complete sequence
          Length = 119096

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 327   gatgatcatcctttgagccttgggaagaccagcgaatggaatcagtt 373
             ||||| ||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 70347 gatgagcatcctttgagtcttgggaagaccagtgtatggaatcagtt 70301
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>gb|AC130798.15| Medicago truncatula clone mth2-27f17, complete sequence
          Length = 92189

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 327  gatgatcatcctttgagccttgggaagaccagcgaatggaatcagtt 373
            ||||| ||||||||||| |||||||||||||| | ||||||||||||
Sbjct: 9072 gatgagcatcctttgagtcttgggaagaccagtgtatggaatcagtt 9026
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>ref|XM_472208.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1179

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 528 ataagatacgtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaat 587
           |||||||| || ||||||||||||||| ||||||| ||||||| || ||| ||   ||||
Sbjct: 598 ataagatatgtacaaggaatgaatgaagttttggcaccactctactatgttttcaagaat 657

                   
Query: 588 gatccaga 595
           ||||||||
Sbjct: 658 gatccaga 665
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>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 396   gagcaggttgaccgtgatgtaaaacgcactcaccctgacatgcatttcttctgtgg 451
             |||||| |||||||||||||||| || ||||| || || ||||| |||||||||||
Sbjct: 16625 gagcagattgaccgtgatgtaaagcgtactcatccagatatgcacttcttctgtgg 16680



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 333   catcctttgagccttgggaagaccagcgaatggaatcagttt 374
             ||||||||||| ||||| |||||||||  |||||||||||||
Sbjct: 15890 catcctttgagtcttggcaagaccagcatatggaatcagttt 15931
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>emb|AL731623.3|OSJN00263 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083D01,
             complete sequence
          Length = 148353

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 528   ataagatacgtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaat 587
             |||||||| || ||||||||||||||| ||||||| ||||||| || ||| ||   ||||
Sbjct: 46844 ataagatatgtacaaggaatgaatgaagttttggcaccactctactatgttttcaagaat 46903

                     
Query: 588   gatccaga 595
             ||||||||
Sbjct: 46904 gatccaga 46911
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                            
Query: 528      ataagatacgtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaat 587
                |||||||| || ||||||||||||||| ||||||| ||||||| || ||| ||   ||||
Sbjct: 18465491 ataagatatgtacaaggaatgaatgaagttttggcaccactctactatgttttcaagaat 18465550

                        
Query: 588      gatccaga 595
                ||||||||
Sbjct: 18465551 gatccaga 18465558
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>dbj|AK109611.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G05, full
           insert sequence
          Length = 1562

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 528 ataagatacgtgcaaggaatgaatgaaattttggcgccactcttctttgtatttcggaat 587
           |||||||| || ||||||||||||||| ||||||| ||||||| || ||| ||   ||||
Sbjct: 893 ataagatatgtacaaggaatgaatgaagttttggcaccactctactatgttttcaagaat 952

                   
Query: 588 gatccaga 595
           ||||||||
Sbjct: 953 gatccaga 960
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>gb|AC091252.3| Bos taurus clone RP42-324C24, complete sequence
          Length = 183383

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 426    caccctgacatgcatttcttctgtgg 451
              ||||||||||||||||||||| ||||
Sbjct: 177983 caccctgacatgcatttcttcagtgg 177958
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 426     caccctgacatgcatttcttctgtgg 451
               ||||||||||||||||||||| ||||
Sbjct: 1698198 caccctgacatgcatttcttcagtgg 1698173
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>ref|XM_724262.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01573)
           partial mRNA
          Length = 1665

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 attctctgagaaatatattaat 502
           ||||||||||||||||||||||
Sbjct: 233 attctctgagaaatatattaat 254
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>ref|XM_672643.1| Plasmodium berghei strain ANKA hypothetical protein (PB000311.01.0)
           partial mRNA
          Length = 1557

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 481 attctctgagaaatatattaat 502
           ||||||||||||||||||||||
Sbjct: 173 attctctgagaaatatattaat 194
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>gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, complete sequence
          Length = 174520

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 472    caaatcaggattctctgagaaa 493
              ||||||||||||||||||||||
Sbjct: 125451 caaatcaggattctctgagaaa 125472
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>gb|AC149127.6| Medicago truncatula clone mth2-108o17, complete sequence
          Length = 92727

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 488   gagaaatatattaatcatcttt 509
             ||||||||||||||||||||||
Sbjct: 32271 gagaaatatattaatcatcttt 32292
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>gb|AC156366.3| Bos taurus clone RP42-304J18, complete sequence
          Length = 91721

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 426   caccctgacatgcatttcttctgtgg 451
             ||||||||||||||||||||| ||||
Sbjct: 13935 caccctgacatgcatttcttcagtgg 13910
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>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete
             sequence
          Length = 150791

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 245   ggctggaggatcagaaggccac 266
             ||||||||||||||||||||||
Sbjct: 14824 ggctggaggatcagaaggccac 14845
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>emb|Z68117.1|CEF45E6 Caenorhabditis elegans Cosmid F45E6, complete sequence
          Length = 34043

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 533   atacgtgcaaggaatgaatga 553
             |||||||||||||||||||||
Sbjct: 18259 atacgtgcaaggaatgaatga 18279
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>gb|AC004131.1|HUAC004131 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-69G12, complete
             sequence
          Length = 77713

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 457   cttcttttgcaaagtcaaatc 477
             |||||||||||||||||||||
Sbjct: 40595 cttcttttgcaaagtcaaatc 40575
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>ref|NM_077694.2| Caenorhabditis elegans F45E6.3 (F45E6.3) mRNA, complete cds
          Length = 1745

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 533 atacgtgcaaggaatgaatga 553
           |||||||||||||||||||||
Sbjct: 750 atacgtgcaaggaatgaatga 770
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>gb|AC027130.5|AC027130 Homo sapiens chromosome 16 clone CTD-2380F24, complete sequence
          Length = 134640

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 457    cttcttttgcaaagtcaaatc 477
              |||||||||||||||||||||
Sbjct: 128890 cttcttttgcaaagtcaaatc 128870
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>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence
          Length = 171048

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 457   cttcttttgcaaagtcaaatc 477
             |||||||||||||||||||||
Sbjct: 72709 cttcttttgcaaagtcaaatc 72729
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 231     ggtggaaatagcgcggctgg 250
               ||||||||||||||||||||
Sbjct: 2401568 ggtggaaatagcgcggctgg 2401549
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>gb|AC132385.5| Mus musculus BAC clone RP23-438F21 from chromosome 18, complete
             sequence
          Length = 184478

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   ctactgagctatctgcccaa 145
             ||||||||||||||||||||
Sbjct: 48360 ctactgagctatctgcccaa 48379
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>gb|BT013271.1| Lycopersicon esculentum clone 134844R, mRNA sequence
          Length = 1419

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  tgtcgaagaaggtgatagat 50
           ||||||||||||||||||||
Sbjct: 371 tgtcgaagaaggtgatagat 390
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>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the
             5' end of the CTPS2 gene for CTP synthase II, the CALB3
             gene for calbindin 3 (vitamin D-dependent calcium binding
             protein), the SYAP1 gene for synapse associated protein 1
             SAP47 homolog (Drosophila) and two CpG islands, complete
             sequence
          Length = 166336

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   tcaccctgacatgcatttct 444
             ||||||||||||||||||||
Sbjct: 22509 tcaccctgacatgcatttct 22528
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>gb|AC134174.1| Drosophila pseudoobscura  FOSMID DPSF1-548A7 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 41626

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 600   aaaaattctgtatggaaactttgc 623
             ||||||||| ||||||||||||||
Sbjct: 34611 aaaaattctttatggaaactttgc 34588
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     ggtggaaatagcgcggctgg 250
               ||||||||||||||||||||
Sbjct: 1983003 ggtggaaatagcgcggctgg 1983022
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ggcgctgtcgaagaaggtga 45
              ||||||||||||||||||||
Sbjct: 154195 ggcgctgtcgaagaaggtga 154214
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>gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, complete sequence
          Length = 160146

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   tcaggattctctgagaaata 495
             ||||||||||||||||||||
Sbjct: 93280 tcaggattctctgagaaata 93261
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>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16,
             complete sequence
          Length = 201353

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 593   agattataaaaattctgtat 612
             ||||||||||||||||||||
Sbjct: 95042 agattataaaaattctgtat 95023
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>gb|AC132370.9| Mus musculus BAC clone RP23-471F3 from chromosome 14, complete sequence
          Length = 169022

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    tgggagcaggagttggcaaa 178
              ||||||||||||||||||||
Sbjct: 106429 tgggagcaggagttggcaaa 106448
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>gb|AC000360.35| Homo sapiens Chromosome 2 BAC Clone 376a1, complete sequence
          Length = 136131

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 459    tcttttgcaaagtcaaatca 478
              ||||||||||||||||||||
Sbjct: 106115 tcttttgcaaagtcaaatca 106096
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>gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, complete sequence
          Length = 159692

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 459    tcttttgcaaagtcaaatca 478
              ||||||||||||||||||||
Sbjct: 144745 tcttttgcaaagtcaaatca 144764
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>gb|AC079586.6| Homo sapiens BAC clone RP11-207G14 from 2, complete sequence
          Length = 148332

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    tcagaaggccacggtggcgg 274
              ||||||||||||||||||||
Sbjct: 135402 tcagaaggccacggtggcgg 135421
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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 533   atacgtgcaaggaatgaatgaaat 556
             ||||||||| ||||||||||||||
Sbjct: 50094 atacgtgcatggaatgaatgaaat 50117



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 533   atacgtgcaaggaatgaatgaaat 556
             ||||||||| ||||||||||||||
Sbjct: 15043 atacgtgcatggaatgaatgaaat 15020
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>gb|AF002997.4| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 245179

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 533    atacgtgcaaggaatgaatgaaat 556
              ||||||||| ||||||||||||||
Sbjct: 224338 atacgtgcatggaatgaatgaaat 224361



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 533    atacgtgcaaggaatgaatgaaat 556
              ||||||||| ||||||||||||||
Sbjct: 189287 atacgtgcatggaatgaatgaaat 189264



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 533    atacgtgcaaggaatgaatgaaat 556
              ||||||||| ||||||||||||||
Sbjct: 170061 atacgtgcatggaatgaatgaaat 170038
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 22      tcgcggcgctgtcgaagaaggtga 45
               |||||| |||||||||||||||||
Sbjct: 2198617 tcgcggagctgtcgaagaaggtga 2198594
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 80      gggcgtccccgacggcgccg 99
               ||||||||||||||||||||
Sbjct: 1363478 gggcgtccccgacggcgccg 1363459
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    cgagcaggttgaccgtgatg 414
              ||||||||||||||||||||
Sbjct: 109470 cgagcaggttgaccgtgatg 109451
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>emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 in linkage group 16,
              complete sequence
          Length = 169830

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 593    agattataaaaattctgtat 612
              ||||||||||||||||||||
Sbjct: 169445 agattataaaaattctgtat 169426
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>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence
          Length = 147470

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 455 ctcttcttttgcaaagtcaa 474
           ||||||||||||||||||||
Sbjct: 97  ctcttcttttgcaaagtcaa 116
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>gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Systems Human BAC library)
             complete sequence
          Length = 124791

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   tcaccctgacatgcatttct 444
             ||||||||||||||||||||
Sbjct: 14797 tcaccctgacatgcatttct 14778
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>dbj|AP003784.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-654C20, complete
              sequence
          Length = 153539

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    tcaggattctctgagaaata 495
              ||||||||||||||||||||
Sbjct: 134866 tcaggattctctgagaaata 134885


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,441,389
Number of Sequences: 3902068
Number of extensions: 7441389
Number of successful extensions: 120085
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119584
Number of HSP's gapped (non-prelim): 497
length of query: 647
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 624
effective length of database: 17,143,297,704
effective search space: 10697417767296
effective search space used: 10697417767296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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