| Clone Name | basd17k18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110721.1| Zea mays CL34516_1 mRNA sequence Length = 986 Score = 67.9 bits (34), Expect = 3e-08 Identities = 102/125 (81%) Strand = Plus / Plus Query: 29 gaagccccacagnaggcgccagcttcacccccatctccagcggcagcggcggcagcggct 88 ||||| |||||| ||| |||||||| || |||| ||||| || ||||| ||||| || Sbjct: 537 gaagcaccacagagggccccagcttccccggcatcaccagctgcggcggcagcagctgca 596 Query: 89 gccgccgcggcagcacaacaagcggcagcgcaagccaagggagttgctggtatcgggtct 148 |||||||||||||| || || |||||||| ||| |||||||| |||||||| || ||| Sbjct: 597 gccgccgcggcagcccagcaggcggcagccaaagttaagggagtggctggtatgggttct 656 Query: 149 tagca 153 ||||| Sbjct: 657 tagca 661
>ref|NM_193606.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2130 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagcacaacaagcggcagcgcaagccaaggga 130 ||||||||||| ||| | || ||||| |||||| ||||||| || ||| |||||||||| Sbjct: 2050 gcagcggcggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggt 2109 Query: 131 gttgctggtat 141 ||||||||||| Sbjct: 2110 gttgctggtat 2120 Score = 44.1 bits (22), Expect = 0.45 Identities = 42/49 (85%) Strand = Plus / Plus Query: 4 acagccgcagcagggtcatgctgttgaagccccacagnaggcgccagct 52 ||||| |||||||| |||||||||||||| |||| | || |||||||| Sbjct: 1971 acagcagcagcaggagcatgctgttgaagctccacggaagacgccagct 2019
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagcacaacaagcggcagcgcaagccaaggga 130 ||||||||||| ||| | || ||||| |||||| ||||||| || ||| |||||||||| Sbjct: 22075489 gcagcggcggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggt 22075548 Query: 131 gttgctggtat 141 ||||||||||| Sbjct: 22075549 gttgctggtat 22075559 Score = 44.1 bits (22), Expect = 0.45 Identities = 42/49 (85%) Strand = Plus / Plus Query: 4 acagccgcagcagggtcatgctgttgaagccccacagnaggcgccagct 52 ||||| |||||||| |||||||||||||| |||| | || |||||||| Sbjct: 22075410 acagcagcagcaggagcatgctgttgaagctccacggaagacgccagct 22075458
>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10 Length = 124344 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagcacaacaagcggcagcgcaagccaaggga 130 ||||||||||| ||| | || ||||| |||||| ||||||| || ||| |||||||||| Sbjct: 87002 gcagcggcggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggt 87061 Query: 131 gttgctggtat 141 ||||||||||| Sbjct: 87062 gttgctggtat 87072 Score = 44.1 bits (22), Expect = 0.45 Identities = 42/49 (85%) Strand = Plus / Plus Query: 4 acagccgcagcagggtcatgctgttgaagccccacagnaggcgccagct 52 ||||| |||||||| |||||||||||||| |||| | || |||||||| Sbjct: 86923 acagcagcagcaggagcatgctgttgaagctccacggaagacgccagct 86971
>dbj|AK103979.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-B05, full insert sequence Length = 788 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagcacaacaagcggcagcgcaagccaaggga 130 ||||||||||| ||| | || ||||| |||||| ||||||| || ||| |||||||||| Sbjct: 315 gcagcggcggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggt 374 Query: 131 gttgctggtat 141 ||||||||||| Sbjct: 375 gttgctggtat 385 Score = 44.1 bits (22), Expect = 0.45 Identities = 42/49 (85%) Strand = Plus / Plus Query: 4 acagccgcagcagggtcatgctgttgaagccccacagnaggcgccagct 52 ||||| |||||||| |||||||||||||| |||| | || |||||||| Sbjct: 236 acagcagcagcaggagcatgctgttgaagctccacggaagacgccagct 284
>dbj|AK072509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128D21, full insert sequence Length = 2606 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagcacaacaagcggcagcgcaagccaaggga 130 |||||| |||| ||| | || ||||| |||||| ||||||| || ||| |||||||||| Sbjct: 2190 gcagcgacggcggcgacggcggccgccgcagcaaaacaagctgcggcgaaagccaagggt 2249 Query: 131 gttgctggtat 141 ||||||||||| Sbjct: 2250 gttgctggtat 2260 Score = 44.1 bits (22), Expect = 0.45 Identities = 42/49 (85%) Strand = Plus / Plus Query: 4 acagccgcagcagggtcatgctgttgaagccccacagnaggcgccagct 52 ||||| |||||||| |||||||||||||| |||| | || |||||||| Sbjct: 2111 acagcagcagcaggagcatgctgttgaagctccacggaagacgccagct 2159
>ref|XM_213471.2| PREDICTED: Rattus norvegicus kelch-like 11 (Drosophila) (predicted) (Klhl11_predicted), mRNA Length = 2130 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 70 ggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||| |||||||| |||||||||||| Sbjct: 15 ggcagcggcggctgcggctgcggccgcggcagca 48
>ref|NM_010258.3| Mus musculus GATA binding protein 6 (Gata6), mRNA Length = 3194 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 788 gcagcggcggcggccgctgccgccgcggcagc 819
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 72 cagcggcggcagcggctgccgccgcggc 99 |||||||||||||||| ||||||||||| Sbjct: 2780 cagcggcggcagcggcggccgccgcggc 2807 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggc 99 ||||| |||||||| ||||| ||||||||||| Sbjct: 95222 gcggcggcggcggcggcggcggccgccgcggc 95191 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 69 cggcagcggcggcagcggctgccgccgcggca 100 |||| |||||||| || ||||||||||||||| Sbjct: 2990 cggcggcggcggcggccgctgccgccgcggca 3021
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 72 cagcggcggcagcggctgccgccgcggc 99 |||||||||||||||| ||||||||||| Sbjct: 87405 cagcggcggcagcggcggccgccgcggc 87432 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 69 cggcagcggcggcagcggctgccgccgcggca 100 |||| |||||||| || ||||||||||||||| Sbjct: 87615 cggcggcggcggcggccgctgccgccgcggca 87646
>dbj|AK142381.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430029G05 product:GATA binding protein 6, full insert sequence Length = 3058 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 648 gcagcggcggcggccgctgccgccgcggcagc 679
>gb|S82462.1| GATA-6=zinc finger transcription factor [mice, embryonic heart, mRNA, 2644 nt] Length = 2644 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 547 gcagcggcggcggccgctgccgccgcggcagc 578
>dbj|AK053151.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030017M08 product:TRANSCRIPTION FACTOR GATA-6 (FRAGMENT) homolog [Mus musculus], full insert sequence Length = 3785 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 791 gcagcggcggcggccgctgccgccgcggcagc 822
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence Length = 186431 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 2137 gcagcggcggcggccgctgccgccgcggcagc 2168
>gb|AF179425.1|AF179425 Mus musculus transcription factor GATA-6 (Gata6) mRNA, complete cds Length = 1362 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 95 gcagcggcggcggccgctgccgccgcggcagc 126
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 53761 gcagcggcggcggccgctgccgccgcggcagc 53730
>dbj|AB034243.1| Mus musculus gene for transcription factor GATA-6, partial cds Length = 16144 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||| || ||||||||||||||||| Sbjct: 6911 gcagcggcggcggccgctgccgccgcggcagc 6942
>ref|XM_415062.1| PREDICTED: Gallus gallus similar to phosphatidylinositol 4-kinase, catalytic, alpha polypeptide isoform 2; phosphatidylinositol 4-kinase, type II, alpha; phosphatidylinositol 4-kinase, type III, alpha; phosphatidylinositol 4-kinase 230 (LOC416767), mRNA Length = 6472 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||||||||||||||||||| | || |||||||| Sbjct: 44 gcggcagcggcggcagcggctacggcagcggcagc 78
>gb|BC055748.1| Mus musculus achaete-scute complex homolog-like 1 (Drosophila), mRNA (cDNA clone MGC:67103 IMAGE:6415061), complete cds Length = 2028 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 188 gcggcggcggcggcagcggcggcggccgcggcagc 222
>ref|NM_008553.2| Mus musculus achaete-scute complex homolog-like 1 (Drosophila) (Ascl1), mRNA Length = 2028 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 188 gcggcggcggcggcagcggcggcggccgcggcagc 222
>gb|AC149044.1| Pan troglodytes chromosome X clone PTB-089E19 map human ortholog q27.1, complete sequence Length = 193569 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 21507 ggcggcagcggctgcggccgcggcagc 21533
>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence Length = 134155 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgc 90 ||||||||||||||||||||||| Sbjct: 42361 gcggcagcggcggcagcggctgc 42339
>emb|AL121875.10|HSBA51C14 Human DNA sequence from clone RP11-51C14 on chromosome Xq26.2-27.3 Contains an embryonic ectoderm development (EED) pseudogene, a ribosomal protein S17 (RPS17) pseudogene, the SOX3 gene for SRY (sex determining region Y)-box 3 and three CpG islands, complete sequence Length = 148598 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 106500 ggcggcagcggctgcggccgcggcagc 106526
>emb|X71135.1|HSSOX3 H.sapiens sox3 gene Length = 2509 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 1185 ggcggcagcggctgcggccgcggcagc 1159
>dbj|AB234866.1| Homo sapiens DLN-1 mRNA for DLN-1, complete cds Length = 2661 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||| ||||| |||||||||| Sbjct: 779 gcggcagcggcggcggcggcggccgccgcgg 809
>dbj|AK143210.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130308P22 product:achaete-scute complex homolog-like 1 (Drosophila), full insert sequence Length = 2260 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 667 gcggcggcggcggcagcggcggcggccgcggcagc 701
>dbj|AK141866.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130038A21 product:achaete-scute complex homolog-like 1 (Drosophila), full insert sequence Length = 1370 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 656 gcggcggcggcggcagcggcggcggccgcggcagc 690
>gb|AC019205.4| Homo sapiens BAC clone RP11-398K22 from 6, complete sequence Length = 198052 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgc 90 ||||||||||||||||||||||| Sbjct: 180496 gcggcagcggcggcagcggctgc 180474
>gb|AC122360.4| Mus musculus BAC clone RP23-428P21 from chromosome 10, complete sequence Length = 210757 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 116645 gcggcggcggcggcagcggcggcggccgcggcagc 116611
>gb|U68534.2|U68534 Mus musculus achaete-scute complex homolog-like 1 (Ascl1) gene, complete cds Length = 14008 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 10673 gcggcggcggcggcagcggcggcggccgcggcagc 10707
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcg 97 ||||||||||||||||||||||| Sbjct: 9947886 cggcggcagcggctgccgccgcg 9947908 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggc 87 ||||||||||||||||||||| Sbjct: 20413718 agcggcagcggcggcagcggc 20413698
>gb|BC093865.1| Homo sapiens SRY (sex determining region Y)-box 3, mRNA (cDNA clone MGC:120900 IMAGE:7939710), complete cds Length = 1421 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 800 ggcggcagcggctgcggccgcggcagc 774
>gb|BC093863.1| Homo sapiens SRY (sex determining region Y)-box 3, mRNA (cDNA clone MGC:120898 IMAGE:7939708), complete cds Length = 1431 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 800 ggcggcagcggctgcggccgcggcagc 774
>gb|AF264713.1|AF264713 Homo sapiens sex determining region Y box 3 (SOX3) gene, complete cds Length = 1692 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 861 ggcggcagcggctgcggccgcggcagc 835
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcg 97 ||||||||||||||||||||||| Sbjct: 21451 cggcggcagcggctgccgccgcg 21473
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcg 97 ||||||||||||||||||||||| Sbjct: 144521 cggcggcagcggctgccgccgcg 144543
>ref|NM_005634.2| Homo sapiens SRY (sex determining region Y)-box 3 (SOX3), mRNA Length = 2074 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 76 ggcggcagcggctgccgccgcggcagc 102 ||||||||||||||| ||||||||||| Sbjct: 744 ggcggcagcggctgcggccgcggcagc 718
>gb|M95603.1|MUSHASH1X Mouse helix-loop-helix protein, homologous to rat ASH1, mRNA complete cds Length = 900 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagc 102 ||||| |||||||||||||| || ||||||||||| Sbjct: 169 gcggcggcggcggcagcggcggcggccgcggcagc 203
>gb|AY665467.1| Homo sapiens clone D11-G10 basic helix-loop-helix protein 3 isoform 1 (BHLHB3) mRNA, complete cds, alternatively spliced Length = 3220 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgc 93 |||||||||||||| ||||||||||| Sbjct: 1321 gcggcagcggcggcggcggctgccgc 1296
>gb|AY665466.1| Homo sapiens clone A10-B11 basic helix-loop-helix protein 3 isoform 2 (BHLHB3) mRNA, complete cds, alternatively spliced Length = 3098 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgc 93 |||||||||||||| ||||||||||| Sbjct: 1045 gcggcagcggcggcggcggctgccgc 1020
>gb|AC158397.2| Mus musculus BAC clone RP23-274H19 from chromosome 16, complete sequence Length = 197843 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||| |||||||||||||| || || ||||||||| Sbjct: 109047 cagcggcggcggcggcagcggcagcggcggcggcagca 109084
>ref|NM_195619.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0079E01.8), mRNA Length = 390 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 cggcagcggcggcagcggctgc 90 |||||||||||||||||||||| Sbjct: 44 cggcagcggcggcagcggctgc 65
>ref|XM_478174.1| Oryza sativa (japonica cultivar-group), mRNA Length = 471 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 258 cagcggcagcggcggcagcggc 279
>ref|NM_002442.2| Homo sapiens musashi homolog 1 (Drosophila) (MSI1), mRNA Length = 2950 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctg 89 |||||||||||||||||||||| Sbjct: 887 gcggcagcggcggcagcggctg 908
>ref|XM_585770.2| PREDICTED: Bos taurus similar to homeobox protein GSH-2 (LOC539228), mRNA Length = 1515 Score = 44.1 bits (22), Expect = 0.45 Identities = 31/34 (91%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcggc 99 ||||||| |||||||||||||| || |||||||| Sbjct: 1022 cagcggccgcggcggcagcggcggcggccgcggc 1055
>ref|NM_002236.4| Homo sapiens potassium voltage-gated channel, subfamily F, member 1 (KCNF1), mRNA Length = 2304 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagcggctgc 90 ||||||||||||||||| |||||||| Sbjct: 423 ccagcggcagcggcggcggcggctgc 448
>ref|XM_205287.5| PREDICTED: Mus musculus protocadherin 19 (Pcdh19), mRNA Length = 6138 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 551 cagcggcagcggcggcagcggc 572
>gb|AY364648.1| Chlamydomonas reinhardtii NIMA-related kinase 6 mRNA, complete cds Length = 2568 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||||||||| Sbjct: 1156 gcagcagcggcagcggctgccgccgc 1181
>ref|XM_844080.1| PREDICTED: Canis familiaris similar to fibrosin 1 (LOC607426), mRNA Length = 2529 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||| |||||||||||||| || || ||||||||| Sbjct: 2128 cagcggcggcggcggcagcggcagcggcagcggcagca 2091
>gb|BC041629.1| Homo sapiens MYC-associated zinc finger protein (purine-binding transcription factor), mRNA (cDNA clone MGC:52386 IMAGE:4309842), complete cds Length = 1940 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 850 cagcggcagcggcggcagcggc 871
>emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chromosome 10 Contains the 5' end of the gene for a novel protein (FLJ40283), a novel gene and two CpG islands, complete sequence Length = 127714 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 80655 cagcggcagcggcggcagcggc 80676 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 80642 gcggcagcggcggcagcggc 80661
>gb|BC026110.2| Homo sapiens potassium voltage-gated channel, subfamily F, member 1, mRNA (cDNA clone MGC:33316 IMAGE:4797827), complete cds Length = 2306 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagcggctgc 90 ||||||||||||||||| |||||||| Sbjct: 425 ccagcggcagcggcggcggcggctgc 450
>gb|AC091606.8| Mus Musculus Strain C57BL6/J chromosome X BAC, RP23-75P20, complete sequence Length = 234105 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 58093 cagcggcagcggcggcagcggc 58072
>gb|AC119149.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0079E01, complete sequence Length = 132870 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 cggcagcggcggcagcggctgc 90 |||||||||||||||||||||| Sbjct: 54838 cggcagcggcggcagcggctgc 54817
>emb|Z79582.1|MMLAZ3 M.musculus LAZ3/BCL6 gene, first intron Length = 4138 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||| |||||||||||||| || || ||||||||| Sbjct: 1670 cagcggcggcggcggcagcggcagcggcggcggcagca 1633
>dbj|AK097472.1| Homo sapiens cDNA FLJ40153 fis, clone TESTI2014324 Length = 2434 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 1873 cagcggcagcggcggcagcggc 1852
>emb|CR624746.1| full-length cDNA clone CS0CAP001YA01 of Thymus of Homo sapiens (human) Length = 1339 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 282 cagcggcagcggcggcagcggc 303
>emb|CR621035.1| full-length cDNA clone CS0DJ014YI17 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1402 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 384 cagcggcagcggcggcagcggc 405
>emb|CR620008.1| full-length cDNA clone CS0DK001YG09 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1507 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 487 cagcggcagcggcggcagcggc 508
>emb|CR617493.1| full-length cDNA clone CS0DJ012YK13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1574 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 547 cagcggcagcggcggcagcggc 568
>emb|CR612001.1| full-length cDNA clone CS0DC021YB19 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1191 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 146 cagcggcagcggcggcagcggc 167
>emb|CR607928.1| full-length cDNA clone CS0DC027YB03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1595 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 574 cagcggcagcggcggcagcggc 595
>emb|CR604629.1| full-length cDNA clone CS0DI040YI10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1371 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 353 cagcggcagcggcggcagcggc 374
>emb|CR603028.1| full-length cDNA clone CS0DM013YO03 of Fetal liver of Homo sapiens (human) Length = 1065 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 67 cagcggcagcggcggcagcggc 88
>dbj|AK074720.1| Homo sapiens cDNA FLJ90239 fis, clone NT2RM2000773, highly similar to Homo sapiens Myc-associated zinc finger protein Length = 1384 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 326 cagcggcagcggcggcagcggc 347
>dbj|AK023262.1| Homo sapiens cDNA FLJ13200 fis, clone NT2RP3004490, highly similar to Homo sapiens mRNA for Musashi Length = 2392 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctg 89 |||||||||||||||||||||| Sbjct: 332 gcggcagcggcggcagcggctg 353
>gb|L01420.1|HUMZFPZ Homo sapiens zinc finger protein mRNA, complete cds Length = 993 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 722 cagcggcagcggcggcagcggc 743
>dbj|AB169116.1| Macaca fascicularis testis cDNA, clone: QtsA-17345, similar to human basic leucine zipper and W2 domains 2 (BZW2), mRNA, RefSeq: NM_014038.1 Length = 1848 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 70 cagcggcagcggcggcagcggc 49
>dbj|AK046726.1| Mus musculus adult male cortex cDNA, RIKEN full-length enriched library, clone:B530002L05 product:hypothetical Cadherin domain containing protein, full insert sequence Length = 3907 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 400 cagcggcagcggcggcagcggc 421
>emb|BX005363.6| Zebrafish DNA sequence from clone CH211-243H4 in linkage group 5, complete sequence Length = 172224 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 gcagggtcatgctgttgaagcc 34 |||||||||||||||||||||| Sbjct: 112146 gcagggtcatgctgttgaagcc 112167
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 cggcagcggcggcagcggctgc 90 |||||||||||||||||||||| Sbjct: 8037865 cggcagcggcggcagcggctgc 8037886 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||||| |||| |||| |||||||||| Sbjct: 6071614 gcggcagcggcggcggcggtggccggcgcggcagca 6071649 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||||| |||| |||| |||||||||| Sbjct: 5585239 gcggcagcggcggcggcggtggccggcgcggcagca 5585204
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||||||| ||||||| || ||||| ||||||||| Sbjct: 22100163 cagcggcagcgtcggcagccgcagccgcagcggcagca 22100200 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 12597844 gcggcagcggcggcagcggc 12597863
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 18210856 cagcggcagcggcggcagcggc 18210835
>ref|XM_624014.1| PREDICTED: Apis mellifera similar to ENSANGP00000019511 (LOC551623), mRNA Length = 1085 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgccgcggc 99 ||||||||||| |||||||||||||| Sbjct: 912 gcggcggcagcagctgccgccgcggc 937 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 gcggcggcagcggctgccgccgcg 97 ||||||||||| |||||||||||| Sbjct: 934 gcggcggcagctgctgccgccgcg 911
>gb|AC013731.10| Homo sapiens BAC clone RP11-546J1 from 2, complete sequence Length = 151851 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 110986 cagcggcagcggcggcagcggc 111007
>dbj|AB017335.2| Homo sapiens KNSL4 and MAZ genes for kinesin-like DNA binding protein and Myc-associated zinc finger protein, complete cds Length = 13548 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 12267 cagcggcagcggcggcagcggc 12288
>gb|AF029780.1|AF029780 Homo sapiens potassium channel mRNA, complete cds Length = 2090 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagcggctgc 90 ||||||||||||||||| |||||||| Sbjct: 181 ccagcggcagcggcggcggcggctgc 206
>dbj|AB124563.1| Pelodiscus sinensis PsSp5 mRNA for zinc finger containing transactivation factor Sp5, complete cds Length = 2079 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 896 cagcggcagcggcggcagcggc 875
>gb|AC022509.21|AC022509 Homo sapiens 12 BAC RP11-283G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204228 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgc 93 |||||||||||||| ||||||||||| Sbjct: 44113 gcggcagcggcggcggcggctgccgc 44138
>gb|AC079587.4| Homo sapiens BAC clone RP11-245G13 from 2, complete sequence Length = 53801 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagcggctgc 90 ||||||||||||||||| |||||||| Sbjct: 52233 ccagcggcagcggcggcggcggctgc 52258
>ref|XM_573948.1| PREDICTED: Rattus norvegicus insulin receptor substrate 2 (Irs2), mRNA Length = 4850 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 46 cagcggcagcggcggcagcggc 67
>ref|XM_573933.1| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ14299 (LOC498651), mRNA Length = 919 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 202 cagcggcagcggcggcagcggc 223
>ref|XM_574564.1| PREDICTED: Rattus norvegicus similar to CDNA sequence BC006909 (LOC499267), mRNA Length = 4893 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||||||||| |||||||| || || ||||||||| Sbjct: 3883 cagcggcagcggcagcagcggcggcggcagcggcagca 3846
>gb|AC009133.7| Homo sapiens chromosome 16 clone RP11-504I2, complete sequence Length = 174363 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 55282 cagcggcagcggcggcagcggc 55261
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 28704 cagcggcagcggcggcagcggc 28683
>gb|AC164661.3| Pan troglodytes BAC clone CH251-11F8 from chromosome unknown, complete sequence Length = 184521 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 cggcagcggcggcagcggctgc 90 |||||||||||||||||||||| Sbjct: 17283 cggcagcggcggcagcggctgc 17304
>gb|AF489858.1| Homo sapiens serum amyloid A activating factor 2 mRNA, complete cds Length = 1919 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 1645 cagcggcagcggcggcagcggc 1666
>gb|AC019041.8| Homo sapiens BAC clone RP11-4K20 from 2, complete sequence Length = 183358 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagcggctgc 90 ||||||||||||||||| |||||||| Sbjct: 432 ccagcggcagcggcggcggcggctgc 457
>gb|AY754564.1| Drosophila affinis scute (scute) gene, exon 1 and partial cds Length = 1163 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgcc 91 ||||||| |||||||||||||||||| Sbjct: 332 cagcggcggcggcggcagcggctgcc 357
>emb|AL732294.18| Mouse DNA sequence from clone RP23-59N7 on chromosome X, complete sequence Length = 112893 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 63996 cagcggcagcggcggcagcggc 63975
>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1218_C12 Length = 105861 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 14099 cagcggcagcggcggcagcggc 14078
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||||||| ||||||| || ||||| ||||||||| Sbjct: 63126 cagcggcagcgtcggcagccgcagccgcagcggcagca 63163
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctg 89 |||||||||||||||||||||| Sbjct: 48480 gcggcagcggcggcagcggctg 48459
>ref|NM_030762.1| Homo sapiens basic helix-loop-helix domain containing, class B, 3 (BHLHB3), mRNA Length = 3641 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgc 93 |||||||||||||| ||||||||||| Sbjct: 1354 gcggcagcggcggcggcggctgccgc 1329
>gb|U89995.1|HSU89995 Human DNA binding protein FKHL15 (FKHL15) mRNA, complete cds Length = 3510 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcg 97 |||||||||||||| ||||| ||||||||| Sbjct: 1206 gcggcagcggcggctgcggcagccgccgcg 1177
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 cggcagcggcggcagcggctgc 90 |||||||||||||||||||||| Sbjct: 8042964 cggcagcggcggcagcggctgc 8042985 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||||| |||| |||| |||||||||| Sbjct: 6072800 gcggcagcggcggcggcggtggccggcgcggcagca 6072835 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||||| |||| |||| |||||||||| Sbjct: 5586426 gcggcagcggcggcggcggtggccggcgcggcagca 5586391
>gb|BC025968.1| Homo sapiens basic helix-loop-helix domain containing, class B, 3, mRNA (cDNA clone MGC:39365 IMAGE:4650325), complete cds Length = 3431 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgc 93 |||||||||||||| ||||||||||| Sbjct: 1511 gcggcagcggcggcggcggctgccgc 1486
>emb|AL935331.9| Mouse DNA sequence from clone RP24-264J19 on chromosome 2, complete sequence Length = 144436 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagca 103 ||||||||||||| |||||||| || || ||||||||| Sbjct: 10976 cagcggcagcggcagcagcggcagcggcagcggcagca 11013
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 383 tgataacttcacatctcaataa 404 |||||||||||||||||||||| Sbjct: 2732334 tgataacttcacatctcaataa 2732355
>dbj|AB209061.1| Homo sapiens mRNA for Serum amyloid A activating factor 2 variant protein Length = 4088 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 2618 cagcggcagcggcggcagcggc 2639
>gb|U33819.1|HSU33819 Human zinc-finger DNA binding protein (MAZ) mRNA, partial cds Length = 1767 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 1490 cagcggcagcggcggcagcggc 1511
>emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on chromosome 4, complete sequence Length = 204841 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgc 93 ||||| |||||||||||||||||||| Sbjct: 64382 gcggcggcggcggcagcggctgccgc 64407
>emb|AL713863.7| Mouse DNA sequence from clone RP23-330I16 on chromosome X, complete sequence Length = 203422 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 172400 cagcggcagcggcggcagcggc 172379
>gb|M93339.1|HUMZINCFP Human zinc finger protein mRNA Length = 1638 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 1361 cagcggcagcggcggcagcggc 1382
>emb|AL833702.1|HSM805015 Homo sapiens mRNA; cDNA DKFZp667I089 (from clone DKFZp667I089) Length = 4716 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 33 cagcggcagcggcggcagcggc 12
>gb|BC039057.1| Homo sapiens, clone IMAGE:4777034, mRNA Length = 1370 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 267 cagcggcagcggcggcagcggc 288
>gb|M94046.1|HUMMAZ Human zinc finger protein (MAZ) mRNA Length = 2389 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggc 87 |||||||||||||||||||||| Sbjct: 1332 cagcggcagcggcggcagcggc 1353
>dbj|AB044088.1| Homo sapiens mRNA for bHLH protein DEC2, complete cds Length = 3641 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgc 93 |||||||||||||| ||||||||||| Sbjct: 1354 gcggcagcggcggcggcggctgccgc 1329
>dbj|AB012851.1| Homo sapiens mRNA for Musashi, complete cds Length = 1940 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctg 89 |||||||||||||||||||||| Sbjct: 887 gcggcagcggcggcagcggctg 908
>ref|NM_128131.2| Arabidopsis thaliana unknown protein AT2G25720 mRNA, complete cds Length = 534 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 catctccagcggcagcggcgg 80 ||||||||||||||||||||| Sbjct: 228 catctccagcggcagcggcgg 208
>gb|AY677108.1| Dasypus sp. VJL-2004 homeobox A11 (HoxA-11) gene, partial cds Length = 671 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccg 92 |||||||||||||| |||||||||| Sbjct: 535 gcggcagcggcggcggcggctgccg 559
>gb|DQ214000.1| Taeniopygia guttata clone 0064P0015B05 transcription factor IIIA variant 1-like mRNA, complete sequence Length = 653 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 67 agcggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||| |||||||| || || ||||||||| Sbjct: 43 agcggcagcggcagcagcggcggcggcggcggcagca 79
>ref|XM_517882.1| PREDICTED: Pan troglodytes similar to small conductance calcium-activated potassium channel protein 2 isoform a; apamin-sensitive small-conductance Ca2+-activated potassium channel (LOC462006), mRNA Length = 2181 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 607 cagcggcggcggcggcagcggctgc 583
>ref|NM_021614.2| Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), transcript variant 1, mRNA Length = 2515 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 632 cagcggcggcggcggcagcggctgc 608
>gb|BT015953.1| Drosophila melanogaster SD09647 full insert cDNA Length = 2972 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 571 gcggcggcagcggctgccgcc 591
>ref|NM_023504.1| Mus musculus NK2 transcription factor related, locus 4 (Drosophila) (Nkx2-4), mRNA Length = 1065 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggc 99 ||||||||||||||||| || |||||||| Sbjct: 238 gcagcggcggcagcggcggcggccgcggc 266
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 ||||||||||| ||||||||||||| Sbjct: 1756867 gcagcggcggcggcggctgccgccg 1756843
>gb|AC009462.7| Drosophila melanogaster clone BACR27G04, complete sequence Length = 151609 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 30868 gcagcggcggcagcagctgccgccg 30844
>gb|BT015207.1| Drosophila melanogaster RE58041 full insert cDNA Length = 3985 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 2077 gcagcggcggcagcagctgccgccg 2053
>ref|XM_958645.1| Neurospora crassa OR74A hypothetical protein (NCU03246.1) partial mRNA Length = 1896 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggctgcc 91 |||||| |||||||||||||||||| Sbjct: 1152 agcggcggcggcggcagcggctgcc 1128
>ref|XM_330681.1| Neurospora crassa OR74A hypothetical protein (NCU03246.1) partial mRNA Length = 1896 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggctgcc 91 |||||| |||||||||||||||||| Sbjct: 1152 agcggcggcggcggcagcggctgcc 1128
>ref|XM_870156.1| PREDICTED: Bos taurus similar to POU domain, class 3, transcription factor 1 (Octamer-binding transcription factor 6) (Oct-6) (POU-domain transcription factor SCIP) (Tst-1) (LOC617830), mRNA Length = 1683 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 |||||||| |||||||||||||| ||||| Sbjct: 82 gcggcagcagcggcagcggctgcggccgc 110
>gb|AC149234.1| Pan troglodytes chromosome X clone PTB-085L05 map human ortholog q28, complete sequence Length = 186825 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 4801 cagcggcggcggcggcagcggctgc 4777
>gb|DQ385509.1| Chlamydomonas reinhardtii strain 229.13 genomic sequence Length = 598 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgcc 94 ||||||| |||||||||||| |||||||| Sbjct: 96 cagcggcggcggcggcagcgactgccgcc 124
>ref|XM_986942.1| PREDICTED: Mus musculus zinc finger protein 91 (Zfp91), mRNA Length = 6406 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 400 cagcggcagcggcggcggcggcggccgcagcgg 368
>ref|XM_984218.1| PREDICTED: Mus musculus zinc finger protein 91 (Zfp91), mRNA Length = 6472 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 466 cagcggcagcggcggcggcggcggccgcagcgg 434
>ref|XM_988843.1| PREDICTED: Mus musculus zinc finger protein 91 (Zfp91), mRNA Length = 6279 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 276 cagcggcagcggcggcggcggcggccgcagcgg 244
>gb|BT025193.1| Drosophila melanogaster FI01127 full insert cDNA Length = 2971 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 571 gcggcggcagcggctgccgcc 591
>ref|XM_983991.1| PREDICTED: Mus musculus SRY-box containing gene 30 (Sox30), mRNA Length = 2196 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 |||||||||||||||| |||||||| Sbjct: 577 cagcggcagcggcggcggcggctgc 553
>ref|XM_838450.1| Leishmania major strain Friedlin DNA polymerase epsilon catalytic subunit (LMJ_1367) partial mRNA Length = 6915 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 ||||||||||| ||||||||||||| Sbjct: 3755 gcagcggcggcggcggctgccgccg 3731
>gb|AC135633.3| Mus musculus BAC clone RP24-84O13 from chromosome 19, complete sequence Length = 185138 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 167807 cagcggcagcggcggcggcggcggccgcagcgg 167775
>gb|AC122255.2| Mus musculus BAC clone RP23-178F22 from chromosome 3, complete sequence Length = 185132 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gtcatgctgttgaagccccac 38 ||||||||||||||||||||| Sbjct: 81081 gtcatgctgttgaagccccac 81061
>gb|AY390238.1| Phalaenopsis bellina specimen-voucher KDAIS KC-351 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390237.1| Phalaenopsis bellina specimen-voucher KDAIS KC-67 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390232.1| Phalaenopsis violacea specimen-voucher KDAIS KC-366 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390231.1| Phalaenopsis violacea specimen-voucher KDAIS KC-365 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390230.1| Phalaenopsis violacea specimen-voucher KDAIS KC-349 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390229.1| Phalaenopsis violacea specimen-voucher KDAIS KC-153 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390228.1| Phalaenopsis violacea specimen-voucher KDAIS KC-152 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY390227.1| Phalaenopsis violacea specimen-voucher KDAIS KC-423 internal transcribed spacer 1, 5.8S ribosomal RNA gene gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>ref|NM_131232.2| Danio rerio even-skipped homeobox 2 (evx2), mRNA Length = 3334 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 1372 cagcggcggcggcggcagcggctgc 1396
>emb|AL136964.8| Human DNA sequence from clone RP11-346C4 on chromosome 13 Contains the 5' end of a novel gene, a novel gene and 2 CpG islands,, complete sequence Length = 171991 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagcac 104 |||||||||||||| ||||| || || |||||||||| Sbjct: 154017 gcggcagcggcggcggcggcggcggcggcggcagcac 153981
>emb|AL121777.39|HSJ1057D4 Human DNA sequence from clone RP5-1057D4 on chromosome 20 Contains the SRMP1 gene for spermidine synthase pseudogene 1, the 5' end of the gene for a novel protein similar to glucosamine-6-sulfatases (SULF2) (sulfatase 2, H-SULF2, KIAA1247) and a CpG island, complete sequence Length = 131888 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagc 102 |||||||||||||||| ||||| || || |||||||| Sbjct: 22032 cagcggcagcggcggcggcggcggcggcagcggcagc 21996
>emb|X99290.1|DREVX2 D.rerio Evx-2 gene Length = 1257 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 1010 cagcggcggcggcggcagcggctgc 1034
>gb|BC057809.1| Homo sapiens activated leukocyte cell adhesion molecule, mRNA (cDNA clone IMAGE:4814389), complete cds Length = 1353 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcgg 86 ||||||||||||||||||||| Sbjct: 36 cagcggcagcggcggcagcgg 16
>ref|NM_001039718.1| Mus musculus zinc finger protein 91 (Zfp91), transcript variant 2, mRNA Length = 3349 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 1000 cagcggcagcggcggcggcggcggccgcagcgg 968
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 |||||||||||||||| |||||||| Sbjct: 204909 cagcggcagcggcggcggcggctgc 204885
>emb|BX322661.17| Zebrafish DNA sequence from clone RP71-78H1 in linkage group 9, complete sequence Length = 146527 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 141778 cagcggcggcggcggcagcggctgc 141802
>ref|NM_053009.2| Mus musculus zinc finger protein 91 (Zfp91), transcript variant 1, mRNA Length = 6541 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 1000 cagcggcagcggcggcggcggcggccgcagcgg 968
>ref|NM_053007.2| Mus musculus ciliary neurotrophic factor (Cntf), transcript variant 2, mRNA Length = 3349 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 1000 cagcggcagcggcggcggcggcggccgcagcgg 968
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163764 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 42259 gcggcggcagcggctgccgcc 42279
>dbj|AK054632.1| Homo sapiens cDNA FLJ30070 fis, clone ASTRO2000046, highly similar to CD166 ANTIGEN PRECURSOR Length = 2560 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcgg 86 ||||||||||||||||||||| Sbjct: 185 cagcggcagcggcggcagcgg 165
>ref|NM_169786.1| Drosophila melanogaster stripe CG7847-RB, transcript variant B (sr), mRNA Length = 4406 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 2513 gcagcggcggcagcagctgccgccg 2489
>gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, complete sequence Length = 108652 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 aaaatctgccttgtatttgta 436 ||||||||||||||||||||| Sbjct: 11080 aaaatctgccttgtatttgta 11060
>gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, complete sequence Length = 178756 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 aaaatctgccttgtatttgta 436 ||||||||||||||||||||| Sbjct: 113786 aaaatctgccttgtatttgta 113766
>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete sequence Length = 100745 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 catctccagcggcagcggcgg 80 ||||||||||||||||||||| Sbjct: 72789 catctccagcggcagcggcgg 72809
>ref|NM_132004.2| Drosophila melanogaster CG4136-RA (CG4136), mRNA Length = 2983 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 584 gcggcggcagcggctgccgcc 604
>ref|NM_079671.2| Drosophila melanogaster stripe CG7847-RA, transcript variant A (sr), mRNA Length = 5757 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 3864 gcagcggcggcagcagctgccgccg 3840
>gb|AF202039.1|AF202039 Mus musculus homeobox transcription factor (Nkx2-4) mRNA, partial cds Length = 1421 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggc 99 ||||||||||||||||| || |||||||| Sbjct: 35 gcagcggcggcagcggcggcggccgcggc 63
>dbj|AK147560.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1079D24 product:zinc finger protein 91, full insert sequence Length = 5532 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 1005 cagcggcagcggcggcggcggcggccgcagcgg 973
>dbj|AK147502.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1055M01 product:zinc finger protein 91, full insert sequence Length = 4841 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 316 cagcggcagcggcggcggcggcggccgcagcgg 284
>gb|BC017840.1|BC017840 Homo sapiens, clone IMAGE:4689305, mRNA, partial cds Length = 1632 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcgg 86 ||||||||||||||||||||| Sbjct: 36 cagcggcagcggcggcagcgg 16
>gb|AC093527.2| Homo sapiens chromosome 5 clone RP11-252A23, complete sequence Length = 191035 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 44163 cagcggcggcggcggcagcggctgc 44187
>gb|BT024570.1| Arabidopsis thaliana At2g25720 mRNA, complete cds Length = 354 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 catctccagcggcagcggcgg 80 ||||||||||||||||||||| Sbjct: 193 catctccagcggcagcggcgg 173
>gb|S79891.1| sr=stripe {90E region, clone c5-1} [Drosophila, Canton Special, mRNA Partial, 2782 nt] Length = 2782 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 920 gcagcggcggcagcagctgccgccg 896
>gb|AC119881.10| Mus musculus chromosome 3, clone RP24-428N8, complete sequence Length = 167095 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gtcatgctgttgaagccccac 38 ||||||||||||||||||||| Sbjct: 137696 gtcatgctgttgaagccccac 137676
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 ggcagcggcggcagcggctgccgcc 94 |||||| |||||||||||||||||| Sbjct: 628981 ggcagcagcggcagcggctgccgcc 628957 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggct 88 ||||||||||||||||||||| Sbjct: 32612 gcggcagcggcggcagcggct 32632
>gb|AF325500.1|AF325500 Antheraea yamamai transposon mariner-like element transposase gene, partial cds; and fibroin gene, complete cds Length = 9921 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||||||||| ||||||||||| Sbjct: 9251 cagcggcagcggcagcagcggctgc 9275 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 8033 cagcagcagcggcggcagcggctgc 8057 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 7565 cagcagcagcggcggcagcggctgc 7589 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 7013 cagcagcagcggcggcagcggctgc 7037 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 6560 cagcagcagcggcggcagcggctgc 6584 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 6110 cagcagcagcggcggcagcggctgc 6134 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 5069 cagcagcagcggcggcagcggctgc 5093 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 4610 cagcagcagcggcggcagcggctgc 4634 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 4151 cagcagcagcggcggcagcggctgc 4175 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 3695 cagcagcagcggcggcagcggctgc 3719 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 2678 cagcagcagcggcggcagcggctgc 2702 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||||||||| ||||||||||| Sbjct: 2462 cagcggcagcggcagcagcggctgc 2486
>gb|AF310675.1|AF310675 Chlamydomonas reinhardtii trans-splicing factor Raa3 gene, complete cds; nuclear gene for chloroplast product Length = 6360 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 5355 gcggcggcagcggctgccgcc 5335
>gb|AF310674.1|AF310674 Chlamydomonas reinhardtii trans-splicing factor Raa3 (raa3) mRNA, complete cds; nuclear gene for chloroplast product Length = 5774 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 4769 gcggcggcagcggctgccgcc 4749
>emb|BX821437.1|CNS0A93R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 470 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 catctccagcggcagcggcgg 80 ||||||||||||||||||||| Sbjct: 175 catctccagcggcagcggcgg 155
>gb|AC025761.5|AC025761 Homo sapiens chromosome 5 clone CTB-109C23, complete sequence Length = 112944 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 49572 cagcggcggcggcggcagcggctgc 49548
>gb|AF202038.1|AF202038 Mus musculus homeobox transcription factor (Nkx2-4) gene, complete cds Length = 4145 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 71 gcagcggcggcagcggctgccgccgcggc 99 ||||||||||||||||| || |||||||| Sbjct: 2354 gcagcggcggcagcggcggcggccgcggc 2382
>gb|AF083334.1|AF083334 Antheraea pernyi fibroin gene, complete cds Length = 9282 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 7355 cagcagcagcggcggcagcggctgc 7379 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 6887 cagcagcagcggcggcagcggctgc 6911 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 6416 cagcagcagcggcggcagcggctgc 6440 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 5951 cagcagcagcggcggcagcggctgc 5975 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 5216 cagcagcagcggcggcagcggctgc 5240 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 4559 cagcagcagcggcggcagcggctgc 4583 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 |||| |||||||||||||||||||| Sbjct: 2330 cagcagcagcggcggcagcggctgc 2354
>gb|BC041127.1| Homo sapiens, Similar to activated leukocyte cell adhesion molecule, clone IMAGE:5730490, mRNA Length = 1870 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcgg 86 ||||||||||||||||||||| Sbjct: 27 cagcggcagcggcggcagcgg 7
>ref|XM_222179.3| PREDICTED: Rattus norvegicus hypothetical LOC304497 (predicted) (LOC304497), mRNA Length = 3265 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggc 87 ||||||||||||||||||||| Sbjct: 105 agcggcagcggcggcagcggc 85
>gb|AY086074.1| Arabidopsis thaliana clone 21040 mRNA, complete sequence Length = 512 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 catctccagcggcagcggcgg 80 ||||||||||||||||||||| Sbjct: 228 catctccagcggcagcggcgg 208
>gb|AC078806.18| Homo sapiens 3 BAC RP11-59B20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141059 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcgg 86 ||||||||||||||||||||| Sbjct: 58247 cagcggcagcggcggcagcgg 58267
>ref|XM_234205.3| PREDICTED: Rattus norvegicus F-box only protein 33 (predicted) (Fbxo33_predicted), mRNA Length = 4262 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgccgcggcagc 102 ||||||||||||||||| || |||||||| Sbjct: 909 gcggcggcagcggctgcggctgcggcagc 937
>gb|AY005801.1| Mus musculus Sox-30 mRNA, complete cds Length = 3074 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 |||||||||||||||| |||||||| Sbjct: 362 cagcggcagcggcggcggcggctgc 338
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggc 87 ||||||||||||||||||||| Sbjct: 137113 agcggcagcggcggcagcggc 137093
>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence Length = 179789 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 tcttagcatccacatgtttgc 166 ||||||||||||||||||||| Sbjct: 51391 tcttagcatccacatgtttgc 51371
>dbj|AK107690.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-B11, full insert sequence Length = 897 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 agcggcagcggcggcagcggc 87 ||||||||||||||||||||| Sbjct: 65 agcggcagcggcggcagcggc 85
>ref|NM_211008.1| Eremothecium gossypii AFR107Wp (AFR107W), mRNA Length = 1191 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 ggcagcggcggcagcggctgccgcc 94 |||||| |||||||||||||||||| Sbjct: 84 ggcagcagcggcagcggctgccgcc 60
>ref|NM_210687.1| Eremothecium gossypii AFL217Cp (AFL217C), mRNA Length = 2076 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggct 88 ||||||||||||||||||||| Sbjct: 229 gcggcagcggcggcagcggct 209
>gb|DQ311647.1| Chlamydomonas reinhardtii nitrate assimilation regulatory gene (Nit2) mRNA, complete cds Length = 5834 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgcc 94 ||||||| |||||||||||| |||||||| Sbjct: 2154 cagcggcggcggcggcagcgactgccgcc 2126
>gb|BC057443.1| Danio rerio even-skipped homeobox 2, mRNA (cDNA clone MGC:64217 IMAGE:6799409), complete cds Length = 3334 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgc 90 ||||||| ||||||||||||||||| Sbjct: 1372 cagcggcggcggcggcagcggctgc 1396
>gb|AC155266.2| Mus musculus BAC clone RP23-259L1 from 12, complete sequence Length = 186747 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggct 88 ||||||||||||||||||||| Sbjct: 78904 gcggcagcggcggcagcggct 78884
>gb|AY110343.1| Zea mays CL56358_1 mRNA sequence Length = 1226 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ggcagcgcaagccaagggagttgctggta 140 ||||||| |||||||||||||||| |||| Sbjct: 352 ggcagcgaaagccaagggagttgccggta 324 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 112 ggcagcgcaagccaagggagttgctggta 140 ||||||| |||||||||||||||| |||| Sbjct: 235 ggcagcgaaagccaagggagttgccggta 207 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 101 gcacaacaagcggcagcgcaagccaagggagttgctggta 140 |||||| | ||||||| | |||||||||||||||| |||| Sbjct: 480 gcacaagaggcggcagggaaagccaagggagttgcaggta 441
>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete sequence Length = 228842 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 200084 gcagcggcggcagcagctgccgccg 200060
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete sequence Length = 303928 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgcc 94 ||||||||||||||||||||| Sbjct: 271640 gcggcggcagcggctgccgcc 271660
>gb|AY900290.1| Phalaenopsis bellina cultivar KDAIS KC-107 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AY900289.1| Phalaenopsis bellina cultivar KDAIS KC-106 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 669 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgc 96 ||||| |||||||||||||| |||||||| Sbjct: 77 gcggcggcggcggcagcggccgccgccgc 49
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagcg 85 ||||||||||||||||||||| Sbjct: 2637410 ccagcggcagcggcggcagcg 2637430
>ref|NM_001627.2| Homo sapiens activated leukocyte cell adhesion molecule (ALCAM), mRNA Length = 4760 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcgg 86 ||||||||||||||||||||| Sbjct: 76 cagcggcagcggcggcagcgg 56
>emb|AL928876.12| Mouse DNA sequence from clone RP23-236O6 on chromosome 2, complete sequence Length = 201545 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccgcggc 99 ||||||||||||||||| || |||||||| Sbjct: 105082 gcagcggcggcagcggcggcggccgcggc 105054
>gb|AC150901.2| Mus musculus BAC clone RP23-62N8 from 19, complete sequence Length = 220883 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcgg 98 |||||||||||||||| ||||| ||||| |||| Sbjct: 197096 cagcggcagcggcggcggcggcggccgcagcgg 197128
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagc 102 |||||||||||||||| ||||| || || |||||||| Sbjct: 3765990 cagcggcagcggcggcggcggcggcggcagcggcagc 3766026
>ref|NM_173384.1| Mus musculus SRY-box containing gene 30 (Sox30), mRNA Length = 3074 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgc 90 |||||||||||||||| |||||||| Sbjct: 362 cagcggcagcggcggcggcggctgc 338
>gb|U42403.1|DMU42403 Drosophila melanogaster stripe a protein mRNA, complete cds Length = 5754 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 3859 gcagcggcggcagcagctgccgccg 3835
>gb|U42402.1|DMU42402 Drosophila melanogaster stripe b protein mRNA, complete cds Length = 4458 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccg 95 |||||||||||||| |||||||||| Sbjct: 2563 gcagcggcggcagcagctgccgccg 2539
>emb|AL833801.9| Mouse DNA sequence from clone RP23-414F8 on chromosome 2, complete sequence Length = 135879 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Minus Query: 66 cagcggcagcggcggcagcggctgccgccgcggcagc 102 |||||||||||||||| ||||| || || |||||||| Sbjct: 89261 cagcggcagcggcggcggcggcagcagcagcggcagc 89225
>gb|M95785.1|HAVGLYGBA Spider monkey alpha-herpesvirus HVA1 (isolated from Ateles sp.) glycoprotein gB (UL27) gene, complete cds, capsid protein gene (UL28), 3' end Length = 4154 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 74 gcggcggcagcggctgccgccgcgg 98 |||||||||||||| |||||||||| Sbjct: 1135 gcggcggcagcggccgccgccgcgg 1159
>dbj|D86074.1| Pinctada fucata mRNA for insoluble protein, complete cds Length = 3331 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 71 gcagcggcggcagcggctgccgccgcggcagca 103 |||||||| ||||||||||| || ||||||||| Sbjct: 726 gcagcggcagcagcggctgcggctgcggcagca 694
>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence Length = 199727 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 292 gtgaatagagaaagaaacacatggaaga 319 |||||||||||||||| ||||| ||||| Sbjct: 134877 gtgaatagagaaagaatcacattgaaga 134904
>gb|BC070445.1| Mus musculus F-box protein 41, mRNA (cDNA clone MGC:91304 IMAGE:30536738), complete cds Length = 5557 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 64 tccagcggcagcggcggcagcggctgccgccgcggc 99 ||||| ||| ||||||||||||||||| || ||||| Sbjct: 620 tccagaggctgcggcggcagcggctgcagcggcggc 585
>ref|XM_634939.1| Dictyostelium discoideum hypothetical protein (DDB0220697), partial mRNA Length = 3627 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcagcacaacaagcggcagc 117 |||||||||||||||||||| Sbjct: 1639 gcagcacaacaagcggcagc 1658
>ref|XM_523935.1| PREDICTED: Pan troglodytes similar to One cut domain family member 2 (ONECUT-2 transcription factor) (OC-2) (LOC468546), mRNA Length = 3198 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 964 gcggcagcggcggcagcggc 983
>ref|XM_481446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 852 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 165 gcggcagcggcggcagcggc 184
>ref|XM_520261.1| PREDICTED: Pan troglodytes similar to PBX3b (LOC464737), mRNA Length = 1680 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 704 cggcggcagcagctgcagccgcggcagc 731
>ref|XM_520076.1| PREDICTED: Pan troglodytes similar to chromosome 9 open reading frame 40 (LOC464530), mRNA Length = 1083 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 595 gcggcagcggcggcagcggc 576
>ref|NM_001031061.1| Gallus gallus spastin (SPAST), mRNA Length = 2457 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 192 gcggcagcggcggcagcggc 211
>ref|XM_518770.1| PREDICTED: Pan troglodytes similar to Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 (LOC463032), mRNA Length = 1668 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 1427 gcggcagcggcggcagcggc 1446
>ref|NM_001031395.1| Gallus gallus ash2 (absent, small, or homeotic)-like (Drosophila) (ASH2L), mRNA Length = 2471 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 28 gcggcagcggcggcagcggc 47
>ref|XM_517483.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC461543), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgcc 91 |||||||||||||| ||||||||| Sbjct: 1119 gcggcagcggcggcggcggctgcc 1096
>ref|NM_001009250.1| Felis catus CD4 antigen (CD4), mRNA Length = 3074 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 ccagcggcagcggcggcagc 84 |||||||||||||||||||| Sbjct: 528 ccagcggcagcggcggcagc 547
>ref|XM_473566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 471 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gcagcggctgccgccgcggc 99 |||||||||||||||||||| Sbjct: 127 gcagcggctgccgccgcggc 146
>ref|XM_472916.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccg 95 ||||| ||||||||| |||||||||||| Sbjct: 283 gcggcggcggcggcatcggctgccgccg 310
>gb|AY360391.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0023H09, complete sequence Length = 178320 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 141912 gcggcagcggcggcagcggc 141893
>gb|BT016650.1| Zea mays clone Contig483 mRNA sequence Length = 1621 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccg 95 ||||||||||||||||||| ||| |||| Sbjct: 42 gcggcagcggcggcagcggatgcggccg 15
>gb|AC104743.28| Mus musculus chromosome 6, clone RP23-27D8, complete sequence Length = 218391 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 64 tccagcggcagcggcggcagcggctgccgccgcggc 99 ||||| ||| ||||||||||||||||| || ||||| Sbjct: 40861 tccagaggctgcggcggcagcggctgcagcggcggc 40896
>gb|AC158779.4| Mus musculus chromosome 15, clone RP23-258P17, complete sequence Length = 203163 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 agaaacacatggaagaaatgcacacata 331 |||| ||||||||||||| ||||||||| Sbjct: 168443 agaatcacatggaagaaaagcacacata 168470
>gb|AY116585.1| Sus scrofa inhibin beta B precursor subunit (INHBB) gene, exons 1 and 2, complete cds Length = 6727 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 2163 gcggcagcggcggcagcggc 2182
>gb|AF405606.1| Homo sapiens insulin-stimulated protein kinase 1 (RPS6KA3) gene, partial cds Length = 671 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 ||||| |||||||||||||| || || ||||||||| Sbjct: 340 gcggcggcggcggcagcggcagcggcagcggcagca 305
>gb|AY020229.1| Oryza sativa microsatellite MRG2554 containing (GA)X12, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 |||||||||||||| |||| |||| |||||||||| Sbjct: 164 gcggcagcggcggcggcggtggccggcgcggcagca 199
>gb|BC101578.1| Homo sapiens pre-B-cell leukemia transcription factor 1, mRNA (cDNA clone MGC:126627 IMAGE:8069084), complete cds Length = 1388 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 431 gcggcagcggcggcagcggc 450
>gb|BC101365.2| Homo sapiens adhesion molecule with Ig-like domain 3, mRNA (cDNA clone MGC:120552 IMAGE:40025741), complete cds Length = 1962 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 cagcggcggcagcggctgccgccgcggcagca 103 |||||||||||||||| | | ||||||||||| Sbjct: 1417 cagcggcggcagcggcaggcaccgcggcagca 1386
>gb|BC024824.1| Mus musculus RIKEN cDNA 2700069A02 gene, mRNA (cDNA clone MGC:38634 IMAGE:5355748), complete cds Length = 2148 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 1 gcggcagcggcggcagcggc 20
>ref|XM_873247.1| PREDICTED: Bos taurus similar to hepatoma-derived growth factor-related protein 2 isoform 1, transcript variant 2 (LOC512959), mRNA Length = 2342 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggctgc 90 ||||||||| |||||||||||||| Sbjct: 49 agcggcagcagcggcagcggctgc 26
>ref|XM_590572.2| PREDICTED: Bos taurus similar to hepatoma-derived growth factor-related protein 2 isoform 1, transcript variant 1 (LOC512959), mRNA Length = 2306 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 agcggcagcggcggcagcggctgc 90 ||||||||| |||||||||||||| Sbjct: 49 agcggcagcagcggcagcggctgc 26
>gb|AC112988.7| Mus musculus chromosome 5, clone RP24-294H5, complete sequence Length = 151194 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cccaggaagaatatgctaca 250 |||||||||||||||||||| Sbjct: 137821 cccaggaagaatatgctaca 137840
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggctgccgccgcggc 99 ||||||||||| || |||||||| |||||||| Sbjct: 110244 gcggcagcggctgcggcggctgcggccgcggc 110275
>gb|AC106169.5| Rattus norvegicus x BAC CH230-105D14 (Children's Hospital Oakland Research Institute) complete sequence Length = 227592 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 81522 gcggcagcggcggcagcggc 81541
>gb|AC148880.2| Chlamydomonas reinhardtii clone cr-40F11, complete sequence Length = 56458 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 46429 gcggcagcggcggcagcggc 46448
>ref|XM_872501.1| PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription factor 3b, transcript variant 13 (LOC539222), mRNA Length = 2565 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 180 cggcggcagcagctgcagccgcggcagc 207
>ref|XM_872398.1| PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription factor 3b, transcript variant 12 (LOC539222), mRNA Length = 2541 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 180 cggcggcagcagctgcagccgcggcagc 207
>ref|XM_864067.1| PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription factor 3b, transcript variant 8 (LOC539222), mRNA Length = 2628 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 180 cggcggcagcagctgcagccgcggcagc 207
>ref|XM_871993.1| PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription factor 3b, transcript variant 10 (LOC539222), mRNA Length = 2595 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 180 cggcggcagcagctgcagccgcggcagc 207
>ref|XM_871890.1| PREDICTED: Bos taurus similar to pre-B-cell leukemia transcription factor 3b, transcript variant 9 (LOC539222), mRNA Length = 2452 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 180 cggcggcagcagctgcagccgcggcagc 207
>ref|XM_868658.1| PREDICTED: Bos taurus similar to Tumor suppressor candidate 2 (PDGFA-associated protein 2) (Fus-1 protein) (Fusion 1 protein) (LOC616600), mRNA Length = 736 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 agcggcagcggcggcagcggctgc 90 ||||| |||||||||||||||||| Sbjct: 101 agcggaagcggcggcagcggctgc 124
>ref|XM_425866.1| PREDICTED: Gallus gallus similar to KIAA0904 protein (LOC428306), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 agcggcagcggcggcagcggctgc 90 |||||| ||||||||||||||||| Sbjct: 1320 agcggcggcggcggcagcggctgc 1343
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research Institute) complete sequence Length = 236662 Score = 40.1 bits (20), Expect = 7.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggctgccgccgcggcagca 103 ||||| |||||||||||||| || || ||||||||| Sbjct: 16132 gcggcggcggcggcagcggcggcggcagcggcagca 16097
>ref|XM_329543.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B11B22.30 [imported] - Neurospora crassa OR74A ) (NCU08499.1) partial mRNA Length = 2856 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 713 gcggcagcggcggcagcggc 694
>ref|XM_958335.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein B11B22.30 [imported] - Neurospora crassa OR74A ) (NCU08499.1) partial mRNA Length = 2856 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 713 gcggcagcggcggcagcggc 694
>ref|NM_029334.1| Mus musculus RIKEN cDNA 2700069A02 gene (2700069A02Rik), transcript variant 1, mRNA Length = 3557 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 31 gcggcagcggcggcagcggc 50
>ref|NM_001008506.1| Mus musculus RIKEN cDNA 2700069A02 gene (2700069A02Rik), transcript variant 2, mRNA Length = 3164 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 31 gcggcagcggcggcagcggc 50
>gb|BC016977.1| Homo sapiens pre-B-cell leukemia transcription factor 3, mRNA (cDNA clone IMAGE:4447228), partial cds Length = 2286 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 122 cggcggcagcagctgcagccgcggcagc 149
>ref|NM_016768.1| Mus musculus pre B-cell leukemia transcription factor 3 (Pbx3), mRNA Length = 2393 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 502 cggcggcagcagctgcagccgcggcagc 529
>ref|NM_008273.1| Mus musculus homeo box D11 (Hoxd11), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 328 gcggcagcggcggcagcggc 347 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gcggcagcggcggcagcggc 87 |||||||||||||||||||| Sbjct: 319 gcggcagcggcggcagcggc 338
>ref|NM_006195.4| Homo sapiens pre-B-cell leukemia transcription factor 3 (PBX3), mRNA Length = 2864 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 75 cggcggcagcggctgccgccgcggcagc 102 |||||||||| ||||| ||||||||||| Sbjct: 453 cggcggcagcagctgcagccgcggcagc 480 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,253,988 Number of Sequences: 3902068 Number of extensions: 5253988 Number of successful extensions: 135797 Number of sequences better than 10.0: 460 Number of HSP's better than 10.0 without gapping: 465 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 132853 Number of HSP's gapped (non-prelim): 2915 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)