| Clone Name | basd17k12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_193124.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 567 bits (286), Expect = e-158 Identities = 462/521 (88%), Gaps = 6/521 (1%) Strand = Plus / Plus Query: 118 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 177 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| || ||| Sbjct: 61 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagc 120 Query: 178 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 237 || |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 121 ------aatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 174 Query: 238 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 297 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 175 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 234 Query: 298 aacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtg 357 |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| Sbjct: 235 aacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtg 294 Query: 358 ttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctccagtttaca 417 || |||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 295 tttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttact 354 Query: 418 ggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacagagtgaag 477 || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 355 gggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaag 414 Query: 478 gttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttcaggcctt 537 ||||| ||||||||||| ||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 415 gttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctt 474 Query: 538 tatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatg 597 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 475 tatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatg 534 Query: 598 cgttctgctagtcaggcccttctttctggatgctctgctgg 638 | | ||||| ||||| ||||||||||||||||||||||| Sbjct: 535 agatatgctaaccaggcacttctttctggatgctctgctgg 575
>ref|XM_506495.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455H11.118-1 mRNA Length = 1744 Score = 567 bits (286), Expect = e-158 Identities = 462/521 (88%), Gaps = 6/521 (1%) Strand = Plus / Plus Query: 118 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 177 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| || ||| Sbjct: 184 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagc 243 Query: 178 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 237 || |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 244 ------aatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 297 Query: 238 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 297 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 298 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 357 Query: 298 aacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtg 357 |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| Sbjct: 358 aacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtg 417 Query: 358 ttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctccagtttaca 417 || |||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 418 tttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttact 477 Query: 418 ggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacagagtgaag 477 || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 478 gggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaag 537 Query: 478 gttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttcaggcctt 537 ||||| ||||||||||| ||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 538 gttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctt 597 Query: 538 tatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatg 597 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 598 tatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatg 657 Query: 598 cgttctgctagtcaggcccttctttctggatgctctgctgg 638 | | ||||| ||||| ||||||||||||||||||||||| Sbjct: 658 agatatgctaaccaggcacttctttctggatgctctgctgg 698
>dbj|AK065122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O22, full insert sequence Length = 1744 Score = 567 bits (286), Expect = e-158 Identities = 462/521 (88%), Gaps = 6/521 (1%) Strand = Plus / Plus Query: 118 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 177 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| || ||| Sbjct: 184 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactctggtagc 243 Query: 178 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 237 || |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 244 ------aatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 297 Query: 238 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 297 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 298 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 357 Query: 298 aacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtg 357 |||| ||||||||||||| |||||||||||||||||||||| |||||||||||||| ||| Sbjct: 358 aacagttggcttgtcaatttggagggtggaggctggtgcaacgatgttaaaagctgcgtg 417 Query: 358 ttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctccagtttaca 417 || |||||| |||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 418 tttcgcaagagcagtcggcgtggttcatcaaatcacatggagagccaactccagtttact 477 Query: 418 ggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacagagtgaag 477 || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct: 478 gggataatgagtaacaggcctgaagaaaatcctgatttctacaactggaacagagtgaag 537 Query: 478 gttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttcaggcctt 537 ||||| ||||||||||| ||||||||||| |||||||||||||| ||| || |||||||| Sbjct: 538 gttcgatattgtgatggcggatccttcactggtgatggggctgatgcgtctgcaggcctt 597 Query: 538 tatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatg 597 |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| Sbjct: 598 tatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggcccaaggaatg 657 Query: 598 cgttctgctagtcaggcccttctttctggatgctctgctgg 638 | | ||||| ||||| ||||||||||||||||||||||| Sbjct: 658 agatatgctaaccaggcacttctttctggatgctctgctgg 698
>gb|BT016667.1| Zea mays clone Contig500 mRNA sequence Length = 1741 Score = 521 bits (263), Expect = e-145 Identities = 460/525 (87%), Gaps = 3/525 (0%) Strand = Plus / Plus Query: 111 ggcgcgcggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactc 170 |||||| ||||||||||||||| ||| || |||| ||| ||| |||||| |||||||| Sbjct: 171 ggcgcggggctccgagccgtggtggaacgagacgcaggtgtacgccaccaccgccaactc 230 Query: 171 cggcagcggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaa 230 ||| |||||| |||||| |||||||| |||||| ||||||||||| || || ||||| Sbjct: 231 cggtggcggca---acggcgtcttcgtcggcctcacgctcatccagtcggcggcggccaa 287 Query: 231 gggagccgtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatc 290 |||||| || |||||||||||||||||||||||||||||||| ||| |||| | |||||| Sbjct: 288 gggagcggtgtgcttggatggaagcttaccaggttaccacctccacagagggtttggatc 347 Query: 291 agggtcaaacaattggcttgtcaatctggagggtggaggctggtgcaatgatgttaaaag 350 ||| |||||| |||||| |||||||| ||||| |||||||||||||||||| | || Sbjct: 348 aggagcaaacagttggctcgtcaatctcgagggcggaggctggtgcaatgatcgcagcag 407 Query: 351 ctgtgtgttccgcaagggcagtcggcgtggttcatcaaaccacatggagaggcagctcca 410 |||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 408 ctgtgtgttccgcaagggcagtcgtcgtggatcatcaaatcacatggagaggcaactcca 467 Query: 411 gtttacaggcataatgagtaacagacctgaagaaaacccagatttctacaactggaacag 470 ||||||||| ||| ||||||||| ||||||||| || || ||||||||||||||||| || Sbjct: 468 gtttacagggatattgagtaacaaacctgaagagaatcccgatttctacaactggaatag 527 Query: 471 agtgaaggttcggtattgtgatggtggatccttcaccggtgatggggctgacgcggcttc 530 ||||||||| ||||| |||||||||||||| ||||| |||||||| |||| |||||| | Sbjct: 528 agtgaaggtccggtactgtgatggtggatctttcactggtgatggctctgatgcggctgc 587 Query: 531 aggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccca 590 |||||||||||||||||||||||| ||||||||||| || ||||||||| | |||||||| Sbjct: 588 aggcctttatttccgaggtcagcgcatttggcaggccgctatggatgacctaatggccca 647 Query: 591 gggaatgcgttctgctagtcaggcccttctttctggatgctctgc 635 |||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 648 aggaatgcgttatgctaatcaggcccttctttctggatgctctgc 692
>gb|AY107261.1| Zea mays PCO091441 mRNA sequence Length = 1409 Score = 440 bits (222), Expect = e-120 Identities = 345/386 (89%) Strand = Plus / Plus Query: 250 ggaagcttaccaggttaccacctacaccgaggatctggatcagggtcaaacaattggctt 309 ||||||||||||||||||||||| ||| |||| | ||||||||| |||||| |||||| Sbjct: 1 ggaagcttaccaggttaccacctccacagagggtttggatcaggagcaaacagttggctc 60 Query: 310 gtcaatctggagggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggc 369 |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 61 gtcaatctcgagggtggaggctggtgcaatgatcgcagcagctgtgtgttccgcaagggc 120 Query: 370 agtcggcgtggttcatcaaaccacatggagaggcagctccagtttacaggcataatgagt 429 ||||| ||||| |||||||| |||||||||||||| |||||||||||||| ||| ||||| Sbjct: 121 agtcgtcgtggatcatcaaatcacatggagaggcaactccagtttacagggatattgagt 180 Query: 430 aacagacctgaagaaaacccagatttctacaactggaacagagtgaaggttcggtattgt 489 |||| ||||||||| || || ||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 181 aacaaacctgaagagaatcccgatttctacaactggaatagagtgaaggtccggtactgt 240 Query: 490 gatggtggatccttcaccggtgatggggctgacgcggcttcaggcctttatttccgaggt 549 ||||||||||| ||||| |||||||| |||| |||||| |||||||||||||||||||| Sbjct: 241 gatggtggatctttcactggtgatggctctgatgcggctgcaggcctttatttccgaggt 300 Query: 550 cagcgtatttggcaggctgccatggatgacttgatggcccagggaatgcgttctgctagt 609 ||||| ||||||||||| || ||||||||| | |||||||| |||||||||| ||||| | Sbjct: 301 cagcgcatttggcaggccgctatggatgacctaatggcccaaggaatgcgttatgctaat 360 Query: 610 caggcccttctttctggatgctctgc 635 |||||||||||||||||||||||||| Sbjct: 361 caggcccttctttctggatgctctgc 386
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 320 agggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggcagtcggcgtg 379 ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| Sbjct: 26288139 agggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtg 26288198 Query: 380 gttcatcaaaccacatggagaggcagctccagtttacaggcataatgagtaacagacctg 439 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 26288199 gttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctg 26288258 Query: 440 aagaaaa 446 ||||||| Sbjct: 26288259 aagaaaa 26288265 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 450 agatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccgg 509 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 26288367 agatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactgg 26288426 Query: 510 tgatggggctgacgcgg 526 |||||||||||| |||| Sbjct: 26288427 tgatggggctgatgcgg 26288443 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 238 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 297 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 26287924 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 26287983 Query: 298 aacaattggcttgtcaatctggagg 322 |||| ||||||||||||| |||||| Sbjct: 26287984 aacagttggcttgtcaatttggagg 26288008 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 530 caggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccc 589 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 26288801 caggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggccc 26288860 Query: 590 agggaatg 597 | |||||| Sbjct: 26288861 aaggaatg 26288868 Score = 60.0 bits (30), Expect = 1e-05 Identities = 98/121 (80%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 118 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 177 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| Sbjct: 26287184 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactc------t 26287237 Query: 178 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 237 || ||||| |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 26287238 ggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 26287297 Query: 238 g 238 | Sbjct: 26287298 g 26287298 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 610 caggcccttctttctggatgctctgctgg 638 ||||| ||||||||||||||||||||||| Sbjct: 26288973 caggcacttctttctggatgctctgctgg 26289001
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 320 agggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggcagtcggcgtg 379 ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| Sbjct: 62767 agggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtg 62826 Query: 380 gttcatcaaaccacatggagaggcagctccagtttacaggcataatgagtaacagacctg 439 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 62827 gttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctg 62886 Query: 440 aagaaaa 446 ||||||| Sbjct: 62887 aagaaaa 62893 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 450 agatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccgg 509 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 62995 agatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactgg 63054 Query: 510 tgatggggctgacgcgg 526 |||||||||||| |||| Sbjct: 63055 tgatggggctgatgcgg 63071 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 238 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 297 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 62552 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 62611 Query: 298 aacaattggcttgtcaatctggagg 322 |||| ||||||||||||| |||||| Sbjct: 62612 aacagttggcttgtcaatttggagg 62636 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 530 caggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccc 589 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 63429 caggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggccc 63488 Query: 590 agggaatg 597 | |||||| Sbjct: 63489 aaggaatg 63496 Score = 60.0 bits (30), Expect = 1e-05 Identities = 98/121 (80%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 118 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 177 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| Sbjct: 61812 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactc------t 61865 Query: 178 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 237 || ||||| |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 61866 ggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 61925 Query: 238 g 238 | Sbjct: 61926 g 61926 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 610 caggcccttctttctggatgctctgctgg 638 ||||| ||||||||||||||||||||||| Sbjct: 63601 caggcacttctttctggatgctctgctgg 63629
>dbj|AP003752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1332_C12 Length = 67349 Score = 172 bits (87), Expect = 9e-40 Identities = 117/127 (92%) Strand = Plus / Plus Query: 320 agggtggaggctggtgcaatgatgttaaaagctgtgtgttccgcaagggcagtcggcgtg 379 ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||||| Sbjct: 7717 agggtggaggctggtgcaacgatgttaaaagctgcgtgtttcgcaagagcagtcggcgtg 7776 Query: 380 gttcatcaaaccacatggagaggcagctccagtttacaggcataatgagtaacagacctg 439 |||||||||| ||||||||||| || ||||||||||| || |||||||||||||| |||| Sbjct: 7777 gttcatcaaatcacatggagagccaactccagtttactgggataatgagtaacaggcctg 7836 Query: 440 aagaaaa 446 ||||||| Sbjct: 7837 aagaaaa 7843 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 450 agatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccgg 509 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 7945 agatttctacaactggaacagagtgaaggttcgatattgtgatggcggatccttcactgg 8004 Query: 510 tgatggggctgacgcgg 526 |||||||||||| |||| Sbjct: 8005 tgatggggctgatgcgg 8021 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 238 gtatgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtca 297 |||||||||||||| ||||||||||| || |||||||||||||| | |||||||||| || Sbjct: 7502 gtatgcttggatgggagcttaccagggtatcacctacaccgagggtttggatcaggggca 7561 Query: 298 aacaattggcttgtcaatctggagg 322 |||| ||||||||||||| |||||| Sbjct: 7562 aacagttggcttgtcaatttggagg 7586 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 530 caggcctttatttccgaggtcagcgtatttggcaggctgccatggatgacttgatggccc 589 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 8379 caggcctttatttccgaggtcagcgtatttggcaggctgctatggatgatctgatggccc 8438 Query: 590 agggaatg 597 | |||||| Sbjct: 8439 aaggaatg 8446 Score = 60.0 bits (30), Expect = 1e-05 Identities = 98/121 (80%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 118 ggctccgagccgtgggcgaatgacacgcgggtctactccaccaatgccaactccggcagc 177 ||||| ||||||||| |||| | |||| |||||||||||||||||||||||| Sbjct: 6762 ggctctgagccgtggctgaatcagacgcaggtctactccaccaatgccaactc------t 6815 Query: 178 ggcagcaacggcgccttcgtcgccctcaccctcatccagtccgccgccgccaagggagcc 237 || ||||| |||| |||||||| | || ||||||||||| || ||||||||||||||| Sbjct: 6816 ggtagcaatggcgtcttcgtcgggattacgctcatccagtcggcggccgccaagggagcc 6875 Query: 238 g 238 | Sbjct: 6876 g 6876 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 610 caggcccttctttctggatgctctgctgg 638 ||||| ||||||||||||||||||||||| Sbjct: 8551 caggcacttctttctggatgctctgctgg 8579
>dbj|AK060807.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-G03, full insert sequence Length = 1466 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 564 ggctgccatggatgacttgatggcccagggaatgcgttctgctagtcaggcccttctttc 623 |||||| |||||||| |||||||||| |||||| | | ||||| ||||| |||||||| Sbjct: 1 ggctgctatggatgatctgatggcccaaggaatgagatatgctaaccaggcacttctttc 60 Query: 624 tggatgctctgctgg 638 ||||||||||||||| Sbjct: 61 tggatgctctgctgg 75
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 |||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 28955140 ccagatttctacaattggaacaaggtcaaggttcggtactgtgatgg 28955186
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 |||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 1305 ccagatttctacaattggaacaaggtcaaggttcggtactgtgatgg 1351
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 |||||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 38198 ccagatttctacaattggaacaaggtcaaggttcggtactgtgatgg 38244
>emb|X99348.1|VRPECASE V.radiata mRNA for pectinacetylesterase Length = 1469 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 |||||||||||| | ||||||||| | |||||| ||||||||||||| Sbjct: 430 ccagatttctacgattggaacagaatcaaggttaggtattgtgatgg 476
>ref|NM_100826.2| Arabidopsis thaliana carboxylic ester hydrolase AT1G09550 mRNA, complete cds Length = 1240 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 442 gaaaacccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatcc 501 ||||| ||||| || ||||| ||||||| ||| || || |||||||||||||||| |||| Sbjct: 443 gaaaatccagacttttacaattggaacaaagtaaaagtccggtattgtgatggtgcatcc 502 Query: 502 tt 503 || Sbjct: 503 tt 504
>ref|XM_467338.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1677 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 ||||| ||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 542 aacccggatttctacaattggaacaaggtcaaggttcggtactgtgatgg 591
>dbj|AK068668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158P10, full insert sequence Length = 1678 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 ||||| ||||||||||| ||||||| || ||||||||||| |||||||| Sbjct: 543 aacccggatttctacaattggaacaaggtcaaggttcggtactgtgatgg 592
>ref|NM_104556.3| Arabidopsis thaliana carboxylic ester hydrolase AT1G57590 mRNA, complete cds Length = 1488 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 460 aactggaacagagtgaaggttcggtattgtgatggtggatc 500 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 557 aactggaatagagtaaaagttcggtattgtgacggtggatc 597
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 460 aactggaacagagtgaaggttcggtattgtgatggtggatc 500 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 19605 aactggaatagagtaaaagttcggtattgtgacggtggatc 19565
>gb|AY123981.1| Arabidopsis thaliana At1g57590/T8L23_6 mRNA, complete cds Length = 1375 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 460 aactggaacagagtgaaggttcggtattgtgatggtggatc 500 |||||||| ||||| || |||||||||||||| |||||||| Sbjct: 443 aactggaatagagtaaaagttcggtattgtgacggtggatc 483
>dbj|AK064109.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G02, full insert sequence Length = 1483 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 496 ||||||||||| ||||||||||||| || ||| | ||||||||||||||| Sbjct: 459 aacccagatttttacaactggaacaaggtcaagatcaggtattgtgatggtg 510
>ref|NM_118061.3| Arabidopsis thaliana carboxylic ester hydrolase AT4G19410 mRNA, complete cds Length = 1475 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 451 aacccagatttctacaattggaacaga 477
>ref|NM_202538.1| Arabidopsis thaliana carboxylic ester hydrolase AT3G09410 transcript variant AT3G09410.3 mRNA, complete cds Length = 1699 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 304 tggcttgtcaatctggagggtggaggctggtgcaa 338 |||||||| || |||||||||||||||||||||| Sbjct: 289 tggcttgttcatttggagggtggaggctggtgcaa 323
>ref|NM_111775.3| Arabidopsis thaliana carboxylic ester hydrolase AT3G09410 transcript variant AT3G09410.1 mRNA, complete cds Length = 1721 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 304 tggcttgtcaatctggagggtggaggctggtgcaa 338 |||||||| || |||||||||||||||||||||| Sbjct: 305 tggcttgttcatttggagggtggaggctggtgcaa 339
>ref|XM_365358.1| Magnaporthe grisea 70-15 hypothetical protein (MG02060.4) partial mRNA Length = 1143 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 ggaagcttaccaggttaccacct 272 ||||||||||||||||||||||| Sbjct: 1116 ggaagcttaccaggttaccacct 1138
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 457 tacaactggaacagagtgaaggttcggtattgtgatggtggatcctt 503 ||||| ||||||| ||| || || |||||||||||||||| |||||| Sbjct: 73072 tacaattggaacaaagtaaaagtccggtattgtgatggtgcatcctt 73026
>gb|AY064626.1| Arabidopsis thaliana putative pectinacetylesterase protein (At4g19410; T5K18.190) mRNA, complete cds Length = 1248 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 319 aacccagatttctacaattggaacaga 345
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence Length = 127331 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 241 tgcttggatggaagcttaccaggttaccacctacaccgaggatctggatcagggtcaaac 300 ||||||||||||| ||||| |||||||| | ||||| |||| ||||||||| || || Sbjct: 17385 tgcttggatggaacattacctggttaccatttgcaccgtggatatggatcaggagcagac 17444 Query: 301 aattggcttgt 311 | ||||||||| Sbjct: 17445 agttggcttgt 17455 Score = 42.1 bits (21), Expect = 2.3 Identities = 42/49 (85%) Strand = Plus / Plus Query: 449 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtgg 497 ||||||| | ||||||||| |||| ||| |||| |||||||||||||| Sbjct: 17959 cagattttttcaactggaatagagcaaagcttcgttattgtgatggtgg 18007
>dbj|AK222036.1| Arabidopsis thaliana mRNA for putative pectinacetylesterase protein, complete cds, clone: RAFL22-74-B18 Length = 1454 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 459 aacccagatttctacaattggaacaga 485
>gb|AY054531.1| Arabidopsis thaliana putative pectinacetylesterase protein (At4g19410; T5K18.190) mRNA, complete cds Length = 1361 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 382 aacccagatttctacaattggaacaga 408
>emb|BX822283.1|CNS0A4X2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1640 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 304 tggcttgtcaatctggagggtggaggctggtgcaa 338 |||||||| || |||||||||||||||||||||| Sbjct: 306 tggcttgttcatttggagggtggaggctggtgcaa 340
>emb|BX826525.1|CNS0A44F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1369 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 439 aacccagatttctacaattggaacaga 465
>emb|BX826511.1|CNS0A44U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 373 aacccagatttctacaattggaacaga 399
>gb|AY087371.1| Arabidopsis thaliana clone 34674 mRNA, complete sequence Length = 1389 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 445 aacccagatttctacaactggaacaga 471 ||||||||||||||||| ||||||||| Sbjct: 428 aacccagatttctacaattggaacaga 454
>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048, complete sequence Length = 110811 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 545 gaggtcagcgtatttggcaggctgccatggatgacttgatggcccagggaatgcgttctg 604 |||| |||||||||||| ||| || |||||||| |||||| | |||||||||||| || Sbjct: 101397 gaggacagcgtatttggtgggcggcaatggatgaattgatgtcaaagggaatgcgttttg 101456 Query: 605 cta 607 ||| Sbjct: 101457 cta 101459 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 609 tcaggcccttctttctggatgctc 632 |||||| ||||||||||||||||| Sbjct: 101557 tcaggctcttctttctggatgctc 101580
>ref|NM_123896.2| Arabidopsis thaliana carboxylic ester hydrolase AT5G45280 transcript variant AT5G45280.2 mRNA, complete cds Length = 1493 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 508 ggtgat 513 |||||| Sbjct: 495 ggtgat 500
>ref|NM_180804.1| Arabidopsis thaliana carboxylic ester hydrolase AT5G45280 transcript variant AT5G45280.1 mRNA, complete cds Length = 1489 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 508 ggtgat 513 |||||| Sbjct: 495 ggtgat 500
>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence Length = 149990 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaaca 469 |||||||||||||||||||||| Sbjct: 98935 ccagatttctacaactggaaca 98956
>gb|AC137831.27| Medicago truncatula clone mth2-34o21, complete sequence Length = 117693 Score = 44.1 bits (22), Expect = 0.57 Identities = 40/46 (86%) Strand = Plus / Plus Query: 449 cagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 ||||||||| |||||||||||||| || || ||||| |||||||| Sbjct: 53423 cagatttctttaactggaacagagtcaaagtgcggtactgtgatgg 53468
>gb|AC148406.12| Medicago truncatula clone mth2-46e9, complete sequence Length = 110272 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 609 tcaggcccttctttctggatgctctgctgg 638 |||||| ||||||||||||||||| ||||| Sbjct: 83207 tcaggctcttctttctggatgctcagctgg 83236 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 460 aactggaacagagtgaaggttcggtattgtgatggtg 496 ||||||||||||||||| |||| || |||||||||| Sbjct: 82692 aactggaacagagtgaaaattcgttactgtgatggtg 82728
>gb|AY150453.1| Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, complete cds Length = 1144 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 322 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 381 Query: 508 ggtgat 513 |||||| Sbjct: 382 ggtgat 387
>gb|AY056198.1| Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, complete cds Length = 1508 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 508 ggtgat 513 |||||| Sbjct: 495 ggtgat 500
>gb|AY057665.1| Arabidopsis thaliana AT5g45280/K9E15_6 mRNA, complete cds Length = 1405 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 435 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 494 Query: 508 ggtgat 513 |||||| Sbjct: 495 ggtgat 500
>emb|BX831894.1|CNS09ZRV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1299 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 398 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 457 Query: 508 ggtgat 513 |||||| Sbjct: 458 ggtgat 463
>gb|AY087860.1| Arabidopsis thaliana clone 39005 mRNA, complete sequence Length = 1403 Score = 44.1 bits (22), Expect = 0.57 Identities = 55/66 (83%) Strand = Plus / Plus Query: 448 ccagatttctacaactggaacagagtgaaggttcggtattgtgatggtggatccttcacc 507 ||||| || ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||| Sbjct: 428 ccagacttttacaattggaatagaatcaaagttcggtattgcgatggttcatctttcacc 487 Query: 508 ggtgat 513 |||||| Sbjct: 488 ggtgat 493
>ref|NM_111465.2| Arabidopsis thaliana carboxylic ester hydrolase AT3G05910 mRNA, complete cds Length = 1797 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 394 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 453 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 687 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 746 Query: 454 ttctacaactggaacagagtgaaggttcg 482 || | ||||||||| ||||| ||| |||| Sbjct: 747 tttttcaactggaatagagttaagcttcg 775
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 ccaactccggcagcggcagcaacggcgcc 192 |||||||||||||| |||||| ||||||| Sbjct: 98589 ccaactccggcagctgcagcagcggcgcc 98617
>ref|XM_878265.1| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 4 (LOC510353), mRNA Length = 1861 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gttcttggccccttcttgccc 85 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>ref|XM_878226.1| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 3 (LOC510353), mRNA Length = 1846 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gttcttggccccttcttgccc 85 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>ref|XM_878188.1| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 2 (LOC510353), mRNA Length = 1871 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gttcttggccccttcttgccc 85 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>ref|XM_587483.2| PREDICTED: Bos taurus similar to adrenocortical dysplasia homolog, transcript variant 1 (LOC510353), mRNA Length = 1891 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 gttcttggccccttcttgccc 85 ||||||||||||||||||||| Sbjct: 140 gttcttggccccttcttgccc 160
>gb|AC147348.2| Xenopus tropicalis clone CH216-122H9, complete sequence Length = 161088 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 aatgatgttaaaagctgtgtg 357 ||||||||||||||||||||| Sbjct: 87043 aatgatgttaaaagctgtgtg 87023
>gb|AY096751.1| Arabidopsis thaliana putative pectinacetylesterase (At3g05910) mRNA, complete cds Length = 1279 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 394 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 453 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 352 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 411 Query: 454 ttctacaactggaacagagtgaaggttcg 482 || | ||||||||| ||||| ||| |||| Sbjct: 412 tttttcaactggaatagagttaagcttcg 440
>gb|AY050847.1| Arabidopsis thaliana putative pectinacetylesterase (At3g05910) mRNA, complete cds Length = 1707 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 394 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 453 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 608 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 667 Query: 454 ttctacaactggaacagagtgaaggttcg 482 || | ||||||||| ||||| ||| |||| Sbjct: 668 tttttcaactggaatagagttaagcttcg 696
>emb|Z35321.1|EV18SRN1 E.verticillata (EvF) gene for 18S ribosomal RNA Length = 1620 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 gcgtggttcatcaaaccacat 395 ||||||||||||||||||||| Sbjct: 1509 gcgtggttcatcaaaccacat 1529
>gb|AC094021.2| Homo sapiens chromosome 3 clone RP11-801L18, complete sequence Length = 214160 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 gccccttcttgccctgctcctcggg 96 |||||| |||||||||||||||||| Sbjct: 112937 gcccctgcttgccctgctcctcggg 112961
>gb|AC092045.2| Homo sapiens chromosome 3 clone RP11-168J18, complete sequence Length = 171343 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 gccccttcttgccctgctcctcggg 96 |||||| |||||||||||||||||| Sbjct: 64073 gcccctgcttgccctgctcctcggg 64049
>gb|AF428303.1|AF428303 Arabidopsis thaliana AT3g05910/F2O10_3 mRNA, complete cds Length = 1784 Score = 42.1 bits (21), Expect = 2.3 Identities = 72/89 (80%) Strand = Plus / Plus Query: 394 atggagaggcagctccagtttacaggcataatgagtaacagacctgaagaaaacccagat 453 ||||||| ||||| ||||||||||| ||| ||||| ||| | || ||||||| || || Sbjct: 683 atggagaaacagcttcagtttacaggaatactgagtgacaaagctcaagaaaatcctgac 742 Query: 454 ttctacaactggaacagagtgaaggttcg 482 || | ||||||||| ||||| ||| |||| Sbjct: 743 tttttcaactggaatagagttaagcttcg 771
>gb|AY626481.1| Cercaria batillariae lineage HL3 haplotype 5 cytochrome oxidase subunit I gene, partial cds; mitochondrial Length = 792 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 agtaacagacctgaagaaaac 447 ||||||||||||||||||||| Sbjct: 165 agtaacagacctgaagaaaac 145
>gb|AC022209.4|AC022209 Homo sapiens BAC clone RP11-588M21 from 11, complete sequence Length = 177314 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 426 gagtaacagacctgaagaaaa 446 ||||||||||||||||||||| Sbjct: 47139 gagtaacagacctgaagaaaa 47159
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 ccaactccggcagcggcagcaacggcgcc 192 |||||||||||||| |||||| ||||||| Sbjct: 2266158 ccaactccggcagctgcagcagcggcgcc 2266186 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ccggcagcggcagcaacggc 189 |||||||||||||||||||| Sbjct: 18885426 ccggcagcggcagcaacggc 18885407
>dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15 Length = 62052 Score = 42.1 bits (21), Expect = 2.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 457 tacaactggaacagagtgaaggttcggtattgtgatggtggatccttcaccggtgat 513 ||||| ||||| ||| | || ||||||||||| |||||| ||| |||||||||||| Sbjct: 29229 tacaattggaatagaatcaaagttcggtattgcgatggttcatctttcaccggtgat 29285
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 209 tcatccagtccgccgccgccaagg 232 |||||||||||| ||||||||||| Sbjct: 1529169 tcatccagtccgtcgccgccaagg 1529146
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 ccggcagcggcagcaacggc 189 |||||||||||||||||||| Sbjct: 52804 ccggcagcggcagcaacggc 52785
>ref|NM_176933.3| Mus musculus dual specificity phosphatase 4 (Dusp4), mRNA Length = 2428 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcagcggcagcaacggcgcctt 194 ||||||||||||| |||||||||| Sbjct: 218 cggcagcggcagccacggcgcctt 241
>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence Length = 185268 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcagcggcagcaacggcgcctt 194 ||||||||||||| |||||||||| Sbjct: 80197 cggcagcggcagccacggcgcctt 80220
>gb|BT013860.1| Lycopersicon esculentum clone 132840F, mRNA sequence Length = 1670 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 317 tggagggtggaggctggtgcaatgatgttaaaagctgtgt 356 ||||||||||||| |||||||| ||||| ||||||||| Sbjct: 383 tggagggtggaggatggtgcaacagtgttagaagctgtgt 422
>ref|XM_810785.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507521.60) partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 actggaacagagtgaaggtt 480 |||||||||||||||||||| Sbjct: 239 actggaacagagtgaaggtt 258
>emb|AL669983.2| Human DNA sequence from clone RP11-220D10 on chromosome 9 Contains a ribosomal protein L35 (RPL35) pseudogene, complete sequence Length = 60725 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 aggcccttctttctggatgc 630 |||||||||||||||||||| Sbjct: 22684 aggcccttctttctggatgc 22703
>emb|AL359175.10| Human DNA sequence from clone RP11-213K14 on chromosome 10 Contains part of a variant of the NEBL gene for the nebulette protein (actin-binding Z-disc protein) and an eukaryotic translation initiation factor 4B (EIF4B)(EIF-4B) pseudogene, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 618 tctttctggatgctctgctg 637 |||||||||||||||||||| Sbjct: 100781 tctttctggatgctctgctg 100800
>gb|AC010307.7| Homo sapiens chromosome 5 clone CTB-49A3, complete sequence Length = 198410 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 ggaagggcggatggccatgggttc 68 ||||||||||||| |||||||||| Sbjct: 91739 ggaagggcggatgcccatgggttc 91762
>gb|AC113348.2| Homo sapiens chromosome 5 clone CTD-2537M22, complete sequence Length = 80723 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tcatcaaaccacatggagag 401 |||||||||||||||||||| Sbjct: 10543 tcatcaaaccacatggagag 10524
>gb|AC026741.6| Homo sapiens chromosome 5 clone CTD-2653M23, complete sequence Length = 195849 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 cataatgagtaacagacctg 439 |||||||||||||||||||| Sbjct: 15573 cataatgagtaacagacctg 15592
>dbj|AK165991.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027H02 product:dual specificity phosphatase 4, full insert sequence Length = 2744 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcagcggcagcaacggcgcctt 194 ||||||||||||| |||||||||| Sbjct: 532 cggcagcggcagccacggcgcctt 555
>gb|AC008902.5| Homo sapiens chromosome 5 clone CTD-2249G23, complete sequence Length = 101352 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 cataatgagtaacagacctg 439 |||||||||||||||||||| Sbjct: 8757 cataatgagtaacagacctg 8738
>dbj|AK080964.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430220P13 product:dual specificity phosphatase 4, full insert sequence Length = 2428 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcagcggcagcaacggcgcctt 194 ||||||||||||| |||||||||| Sbjct: 218 cggcagcggcagccacggcgcctt 241
>dbj|AK053746.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130306H24 product:dual specificity phosphatase 4, full insert sequence Length = 1699 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 cggcagcggcagcaacggcgcctt 194 ||||||||||||| |||||||||| Sbjct: 215 cggcagcggcagccacggcgcctt 238
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 449 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 496 ||||||| ||||||||||||| || ||| | ||||||||||||||| Sbjct: 43061968 cagatttttacaactggaacaaggtcaagatcaggtattgtgatggtg 43061921 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 agatttctacaactggaacagagt 473 |||||| ||||||||||||||||| Sbjct: 38807716 agatttttacaactggaacagagt 38807693
>dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0459B04 Length = 142475 Score = 40.1 bits (20), Expect = 8.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 449 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 496 ||||||| ||||||||||||| || ||| | ||||||||||||||| Sbjct: 58997 cagatttttacaactggaacaaggtcaagatcaggtattgtgatggtg 58950
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 450 agatttctacaactggaacagagt 473 |||||| ||||||||||||||||| Sbjct: 80598 agatttttacaactggaacagagt 80575
>gb|AC126915.2| Homo sapiens chromosome 5 clone RP11-21I4, complete sequence Length = 144199 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tcatcaaaccacatggagag 401 |||||||||||||||||||| Sbjct: 142997 tcatcaaaccacatggagag 142978
>dbj|AK110377.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-C08, full insert sequence Length = 2609 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 ccggcagcggcagcaacggc 189 |||||||||||||||||||| Sbjct: 942 ccggcagcggcagcaacggc 961
>dbj|AK068437.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H21, full insert sequence Length = 2120 Score = 40.1 bits (20), Expect = 8.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 443 aaaacccagatttctacaactggaacagagtgaaggttcggtattgtgatgg 494 ||||||||||||| ||||| ||||| | ||| ||| | ||||||||||||| Sbjct: 412 aaaacccagatttttacaattggaataaagttaagataaggtattgtgatgg 463
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 168 ctccggcagcggcagcaacggcgccttcgtcg 199 |||||||| |||| ||||||||||| |||||| Sbjct: 3357067 ctccggcatcggccgcaacggcgccatcgtcg 3357036
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ccttcgtcgccctcaccctc 210 |||||||||||||||||||| Sbjct: 3867826 ccttcgtcgccctcaccctc 3867845
>dbj|AP006657.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342b, complete sequence Length = 58173 Score = 40.1 bits (20), Expect = 8.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 449 cagatttctacaactggaacagagtgaaggttcggtattgtgatggtg 496 ||||||||| |||||||||| |||| | | |||||||||||||||| Sbjct: 27232 cagatttctttaactggaacaaggtgatgatacggtattgtgatggtg 27279
>emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chromosome 4, complete sequence Length = 200628 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 gggtggaggctggtgcaatg 340 |||||||||||||||||||| Sbjct: 81506 gggtggaggctggtgcaatg 81525
>emb|AL669975.9| Mouse DNA sequence from clone RP23-218H24 on chromosome X, complete sequence Length = 230634 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccacatggagaggcagctcc 409 |||||||||||||||||||| Sbjct: 111796 ccacatggagaggcagctcc 111777 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,289,986 Number of Sequences: 3902068 Number of extensions: 5289986 Number of successful extensions: 105848 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 105255 Number of HSP's gapped (non-prelim): 589 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)