ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17i16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (AC... 1124 0.0
2gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltran... 914 0.0
3ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predic... 258 2e-65
4emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 258 2e-65
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 258 2e-65
6dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 2e-65
7ref|XM_474244.1| Oryza sativa (japonica cultivar-group), predic... 222 1e-54
8ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.032
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
10dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.032
11gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.13
12dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 44 0.50
13ref|XM_465240.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
14ref|XM_507475.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.0
15ref|XM_506788.2| PREDICTED Oryza sativa (japonica cultivar-group... 42 2.0
16ref|XM_596207.2| PREDICTED: Bos taurus similar to myosin light c... 42 2.0
17gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete... 42 2.0
18gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome... 42 2.0
19emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 42 2.0
20dbj|AK153693.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 2.0
21dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
22dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
23dbj|AK120657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
24dbj|AK107002.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
25dbj|AK106848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
26dbj|AK102703.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
27ref|NM_102471.3| Arabidopsis thaliana unknown protein AT1G27090 ... 40 7.8
28ref|NM_192143.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
29ref|NM_184874.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
30gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 7.8
31gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosom... 40 7.8
32ref|XM_583699.2| PREDICTED: Bos taurus CE5 protein-like (LOC5071... 40 7.8
33gb|AC116450.17| Mus musculus chromosome 7, clone RP24-249O20, co... 40 7.8
34gb|AY317642.1| Mus musculus olfactory receptor Olfr533 (Olfr533)... 40 7.8
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.8
36gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosom... 40 7.8
37gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome... 40 7.8
38gb|AC117670.15| Mus musculus chromosome 7, clone RP23-383P11, co... 40 7.8
39ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA 40 7.8
40emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on ch... 40 7.8
41emb|AL157945.21| Human DNA sequence from clone RP4-628J24 on chr... 40 7.8
42gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 7.8
43gb|AY091390.1| Arabidopsis thaliana unknown protein (At1g27090) ... 40 7.8
44gb|AY074367.1| Arabidopsis thaliana unknown protein (At1g27090) ... 40 7.8
45gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.8
46gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete se... 40 7.8
47gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds 40 7.8
48gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 7.8
49dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.8
50gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence 40 7.8
51gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, comple... 40 7.8
52gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC... 40 7.8
53gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.8
54gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 7.8
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
56dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
57ref|NM_001011815.1| Mus musculus olfactory receptor 533 (Olfr533... 40 7.8
58dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.8
59gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana... 40 7.8
60gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome 40 7.8
61dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
62dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 7.8
63dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.8
64dbj|AK111438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
65emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.8
66dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
67gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, co... 40 7.8
68gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 7.8
69gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.8
70gb|U79644.1|LDU79644 Lymantria dispar nucleopolyhedrovirus, isol... 40 7.8 
>gb|AY228552.1| Hordeum vulgare agmatine coumaroyltransferase (ACT) mRNA, complete
           cds
          Length = 1508

 Score = 1124 bits (567), Expect = 0.0
 Identities = 574/575 (99%), Gaps = 1/575 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttctcagcctgcaccccagcggcgacgacgggccagnaggagctcatgctaatccaggt 60
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 356 gttctcagcctgcaccccagcggcgacgacgggccag-aggagctcatgctaatccaggt 414

                                                                       
Query: 61  cacgcggttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcgtgtccga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 cacgcggttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcgtgtccga 474

                                                                       
Query: 121 cggccgctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcgccgccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cggccgctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcgccgccat 534

                                                                       
Query: 181 cgaccccgtcccggtgcacgaccgtgcttccttcttccatccccgcgaaccgctgcacgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cgaccccgtcccggtgcacgaccgtgcttccttcttccatccccgcgaaccgctgcacgt 594

                                                                       
Query: 241 cgagtacgagcaccgtggcgtcgagttcaagccctacgagaaggcacacgacgttgtctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cgagtacgagcaccgtggcgtcgagttcaagccctacgagaaggcacacgacgttgtctg 654

                                                                       
Query: 301 tggtgcggacggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tggtgcggacggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagtt 714

                                                                       
Query: 361 catctccaagctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 catctccaagctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgca 774

                                                                       
Query: 421 gtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcgggga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcgggga 834

                                                                       
Query: 481 gaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccgga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccgga 894

                                              
Query: 541 cggatacaccggcaacgtcatcctctgggcgcggc 575
           |||||||||||||||||||||||||||||||||||
Sbjct: 895 cggatacaccggcaacgtcatcctctgggcgcggc 929
to top
>gb|AY234333.1| Triticum aestivum putative agmatine coumaroyltransferase mRNA,
           partial cds
          Length = 1220

 Score =  914 bits (461), Expect = 0.0
 Identities = 543/569 (95%), Gaps = 1/569 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   agcctgcaccccagcggcgacgacgggccagnaggagctcatgctaatccaggtcacgcg 66
           ||||||||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||||
Sbjct: 97  agcctgcaccccaacggcgacgacgggcccg-aggagctgatgctgatccaggtcacgcg 155

                                                                       
Query: 67  gttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcgtgtccgacggccg 126
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 cttcccgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcgtgtccgacggccg 215

                                                                       
Query: 127 ctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccc 186
            ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 216 atccaccggcaacttcttcgtcgcctggagccaggccacccgcggtgccgccatcgaccc 275

                                                                       
Query: 187 cgtcccggtgcacgaccgtgcttccttcttccatccccgcgaaccgctgcacgtcgagta 246
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cgtcccggtgcacgaccgcgcttccttcttccatccccgcgaaccgctgcacgtcgagta 335

                                                                       
Query: 247 cgagcaccgtggcgtcgagttcaagccctacgagaaggcacacgacgttgtctgtggtgc 306
           ||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||
Sbjct: 336 cgagcaccgtggcgtcgagttcaagccctgcgagaaggtgcacgacgttgtatgtggtgc 395

                                                                       
Query: 307 ggacggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctc 366
            || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgatggcgacgacgacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctc 455

                                                                       
Query: 367 caagctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgcagtgcgt 426
           || ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 456 caggctcaaggcgcaggcgtcggctggcgcgcccaggccgtgcagcaccctgcagtgcgt 515

                                                                       
Query: 427 ggtggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcggggagaccac 486
           |||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 516 ggtggcgcacctgtggcggagcatgacaatggcgcgcgggctcgacggcggggagagcac 575

                                                                       
Query: 487 cagcgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccggacggata 546
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cagcgtcgccatcgcggtggacgggagagcgcggatgagcccgcaggtgccggacggata 635

                                        
Query: 547 caccggcaacgtcatcctctgggcgcggc 575
           ||| |||||||||||||||||||||||||
Sbjct: 636 cactggcaacgtcatcctctgggcgcggc 664
to top
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score =  258 bits (130), Expect = 2e-65
 Identities = 232/266 (87%)
 Strand = Plus / Plus

                                                                       
Query: 310 cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 369
           ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 606 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 665

                                                                       
Query: 370 gctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgcagtgcgtggt 429
           ||||||| ||||||||||||||||||||| | | || | |||||| ||||||||||||||
Sbjct: 666 gctcaagtcgcaggcgtcggctggcgcgcaccggccgtacagcacgctgcagtgcgtggt 725

                                                                       
Query: 430 ggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcggggagaccaccag 489
           ||| |||||||||||  ||||||||| ||| ||||||||||||||  | ||| |||||||
Sbjct: 726 ggcgcacctgtggcgatgcatgacgaaggcacgcgggctcgacgggcgcgagtccaccag 785

                                                                       
Query: 490 cgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccggacggatacac 549
           |||   ||||||||| |||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 786 cgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgccggtgccggacggctacac 845

                                     
Query: 550 cggcaacgtcatcctctgggcgcggc 575
            ||||| ||| | |||||||||||||
Sbjct: 846 gggcaatgtcgtgctctgggcgcggc 871



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 239 gtcgagtacgagcaccgtggcgtcgagttcaagccctacga 279
           ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 532 gtcgagttcgagcaccgtggcgtggagttcaagccgtacga 572



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 153 ggagccaggccacccgcggcgccgc 177
           |||||||||||||||||||||||||
Sbjct: 447 ggagccaggccacccgcggcgccgc 471
to top
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score =  258 bits (130), Expect = 2e-65
 Identities = 232/266 (87%)
 Strand = Plus / Plus

                                                                         
Query: 310   cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 369
             ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 10946 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 11005

                                                                         
Query: 370   gctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgcagtgcgtggt 429
             ||||||| ||||||||||||||||||||| | | || | |||||| ||||||||||||||
Sbjct: 11006 gctcaagtcgcaggcgtcggctggcgcgcaccggccgtacagcacgctgcagtgcgtggt 11065

                                                                         
Query: 430   ggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcggggagaccaccag 489
             ||| |||||||||||  ||||||||| ||| ||||||||||||||  | ||| |||||||
Sbjct: 11066 ggcgcacctgtggcgatgcatgacgaaggcacgcgggctcgacgggcgcgagtccaccag 11125

                                                                         
Query: 490   cgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccggacggatacac 549
             |||   ||||||||| |||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 11126 cgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgccggtgccggacggctacac 11185

                                       
Query: 550   cggcaacgtcatcctctgggcgcggc 575
              ||||| ||| | |||||||||||||
Sbjct: 11186 gggcaatgtcgtgctctgggcgcggc 11211



 Score =  222 bits (112), Expect = 1e-54
 Identities = 151/164 (92%)
 Strand = Plus / Minus

                                                                         
Query: 54    tccaggtcacgcggttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcg 113
             |||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||| |
Sbjct: 14833 tccaggtcacgcggttcgcgtgcgggtccctcgccgtgggcttcaccgcgcaccacatgg 14774

                                                                         
Query: 114   tgtccgacggccgctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcg 173
             |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 14773 tgtccgacggccgcgccaccagcaacttcttcctcgcgtggagccaggccacccgcggcg 14714

                                                         
Query: 174   ccgccatcgaccccgtcccggtgcacgaccgtgcttccttcttc 217
              ||||||| |||||||||||||||||||||| || |||||||||
Sbjct: 14713 tcgccatccaccccgtcccggtgcacgaccgcgcctccttcttc 14670



 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                         
Query: 409   cagcaccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggct 468
             |||||||||||||||||||||||| |||||||||||  |||| |||||||| ||||||||
Sbjct: 14460 cagcaccctgcagtgcgtggtggcgcacctgtggcgctgcataacgatggctcgcgggct 14401

                                                                         
Query: 469   cgacggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagccc 528
             ||| ||  | | | |||| |||||  ||||||||||||||||| | ||||||||||||||
Sbjct: 14400 cgaggggagcgtggccacgagcgtgtccatcgccgtggacgggcgcgcgcggatgagccc 14341

                                                            
Query: 529   gcaggtgccggacggatacaccggcaacgtcatcctctgggcgcggc 575
             || ||||| ||| || ||||| ||||||||| | |||||||| ||||
Sbjct: 14340 gccggtgctggatggctacacgggcaacgtcgtgctctgggcacggc 14294



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                         
Query: 309   acggcgacgaggacgaggtggtggtga---acaaggtgcacttcagccgggagttcatct 365
             ||||| |||| | ||||||||||||||   ||||||||||||||||  ||||||||||||
Sbjct: 14566 acggccacgacggcgaggtggtggtgacacacaaggtgcacttcagtagggagttcatct 14507

                                      
Query: 366   ccaagctcaaggcgcaggcgtcggc 390
             |||||||||||||||  ||||||||
Sbjct: 14506 ccaagctcaaggcgctcgcgtcggc 14482



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 239   gtcgagtacgagcaccgtggcgtcgagttcaagccctacga 279
             ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 10872 gtcgagttcgagcaccgtggcgtggagttcaagccgtacga 10912



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 153   ggagccaggccacccgcggcgccgc 177
             |||||||||||||||||||||||||
Sbjct: 10787 ggagccaggccacccgcggcgccgc 10811
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  258 bits (130), Expect = 2e-65
 Identities = 232/266 (87%)
 Strand = Plus / Plus

                                                                            
Query: 310      cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 369
                ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 33960049 cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 33960108

                                                                            
Query: 370      gctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgcagtgcgtggt 429
                ||||||| ||||||||||||||||||||| | | || | |||||| ||||||||||||||
Sbjct: 33960109 gctcaagtcgcaggcgtcggctggcgcgcaccggccgtacagcacgctgcagtgcgtggt 33960168

                                                                            
Query: 430      ggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcggggagaccaccag 489
                ||| |||||||||||  ||||||||| ||| ||||||||||||||  | ||| |||||||
Sbjct: 33960169 ggcgcacctgtggcgatgcatgacgaaggcacgcgggctcgacgggcgcgagtccaccag 33960228

                                                                            
Query: 490      cgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccggacggatacac 549
                |||   ||||||||| |||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 33960229 cgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgccggtgccggacggctacac 33960288

                                          
Query: 550      cggcaacgtcatcctctgggcgcggc 575
                 ||||| ||| | |||||||||||||
Sbjct: 33960289 gggcaatgtcgtgctctgggcgcggc 33960314



 Score =  222 bits (112), Expect = 1e-54
 Identities = 151/164 (92%)
 Strand = Plus / Minus

                                                                            
Query: 54       tccaggtcacgcggttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcg 113
                |||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||| |
Sbjct: 33963936 tccaggtcacgcggttcgcgtgcgggtccctcgccgtgggcttcaccgcgcaccacatgg 33963877

                                                                            
Query: 114      tgtccgacggccgctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcg 173
                |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 33963876 tgtccgacggccgcgccaccagcaacttcttcctcgcgtggagccaggccacccgcggcg 33963817

                                                            
Query: 174      ccgccatcgaccccgtcccggtgcacgaccgtgcttccttcttc 217
                 ||||||| |||||||||||||||||||||| || |||||||||
Sbjct: 33963816 tcgccatccaccccgtcccggtgcacgaccgcgcctccttcttc 33963773



 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                            
Query: 409      cagcaccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggct 468
                |||||||||||||||||||||||| |||||||||||  |||| |||||||| ||||||||
Sbjct: 33963563 cagcaccctgcagtgcgtggtggcgcacctgtggcgctgcataacgatggctcgcgggct 33963504

                                                                            
Query: 469      cgacggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagccc 528
                ||| ||  | | | |||| |||||  ||||||||||||||||| | ||||||||||||||
Sbjct: 33963503 cgaggggagcgtggccacgagcgtgtccatcgccgtggacgggcgcgcgcggatgagccc 33963444

                                                               
Query: 529      gcaggtgccggacggatacaccggcaacgtcatcctctgggcgcggc 575
                || ||||| ||| || ||||| ||||||||| | |||||||| ||||
Sbjct: 33963443 gccggtgctggatggctacacgggcaacgtcgtgctctgggcacggc 33963397



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Minus

                                                                            
Query: 309      acggcgacgaggacgaggtggtggtga---acaaggtgcacttcagccgggagttcatct 365
                ||||| |||| | ||||||||||||||   ||||||||||||||||  ||||||||||||
Sbjct: 33963669 acggccacgacggcgaggtggtggtgacacacaaggtgcacttcagtagggagttcatct 33963610

                                         
Query: 366      ccaagctcaaggcgcaggcgtcggc 390
                |||||||||||||||  ||||||||
Sbjct: 33963609 ccaagctcaaggcgctcgcgtcggc 33963585



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                         
Query: 239      gtcgagtacgagcaccgtggcgtcgagttcaagccctacga 279
                ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 33959975 gtcgagttcgagcaccgtggcgtggagttcaagccgtacga 33960015



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 153      ggagccaggccacccgcggcgccgc 177
                |||||||||||||||||||||||||
Sbjct: 33959890 ggagccaggccacccgcggcgccgc 33959914
to top
>dbj|AK109743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E07, full
            insert sequence
          Length = 1640

 Score =  258 bits (130), Expect = 2e-65
 Identities = 232/266 (87%)
 Strand = Plus / Plus

                                                                        
Query: 310  cggcgacgaggacgaggtggtggtgaacaaggtgcacttcagccgggagttcatctccaa 369
            ||||||||| |||||||||||| | |||||||||||||| |||||||| |||||||| ||
Sbjct: 760  cggcgacgacgacgaggtggtgataaacaaggtgcacttgagccgggaattcatctcgaa 819

                                                                        
Query: 370  gctcaaggcgcaggcgtcggctggcgcgcccagaccctgcagcaccctgcagtgcgtggt 429
            ||||||| ||||||||||||||||||||| | | || | |||||| ||||||||||||||
Sbjct: 820  gctcaagtcgcaggcgtcggctggcgcgcaccggccgtacagcacgctgcagtgcgtggt 879

                                                                        
Query: 430  ggcacacctgtggcggagcatgacgatggcgcgcgggctcgacggcggggagaccaccag 489
            ||| |||||||||||  ||||||||| ||| ||||||||||||||  | ||| |||||||
Sbjct: 880  ggcgcacctgtggcgatgcatgacgaaggcacgcgggctcgacgggcgcgagtccaccag 939

                                                                        
Query: 490  cgtcgccatcgccgtggacgggagagcgcggatgagcccgcaggtgccggacggatacac 549
            |||   ||||||||| |||||| | |||||||||||||||| |||||||||||| |||||
Sbjct: 940  cgtgtgcatcgccgtcgacgggcgcgcgcggatgagcccgccggtgccggacggctacac 999

                                      
Query: 550  cggcaacgtcatcctctgggcgcggc 575
             ||||| ||| | |||||||||||||
Sbjct: 1000 gggcaatgtcgtgctctgggcgcggc 1025



 Score =  224 bits (113), Expect = 2e-55
 Identities = 233/273 (85%), Gaps = 4/273 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   agcctgcaccccagcggcgacgacgggccagnaggagctcatgctaatccaggtcacgcg 66
           ||||||||||| ||||||||||||| |      |||||| ||||| ||||||||||||||
Sbjct: 458 agcctgcacccgagcggcgacgacgcg----gtggagctgatgctcatccaggtcacgcg 513

                                                                       
Query: 67  gttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcgtgtccgacggccg 126
           |||||||||||| || ||||||||||| ||||||||||||||||||||| | ||||||||
Sbjct: 514 gttcgcgtgcggctccctcgtcgtgggcttcaccacgcagcacatcgtggcagacggccg 573

                                                                       
Query: 127 ctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcgccgccatcgaccc 186
           | |||||  |||||||||| |||||||||||||||||||||||||||||||| || ||||
Sbjct: 574 cgccaccaacaacttcttcctcgcgtggagccaggccacccgcggcgccgccttccaccc 633

                                                                       
Query: 187 cgtcccggtgcacgaccgtgcttccttcttccatccccgcgaaccgctgcacgtcgagta 246
            ||||| ||||||||||| |  |||||||||   || |||||  | |   | ||||||| 
Sbjct: 634 tgtccccgtgcacgaccgcgtctccttcttcgcgccgcgcgacactcccaaggtcgagtt 693

                                            
Query: 247 cgagcaccgtggcgtcgagttcaagccctacga 279
           ||||||||||||||| ||||||||||| |||||
Sbjct: 694 cgagcaccgtggcgtggagttcaagccgtacga 726
to top
>ref|XM_474244.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1350

 Score =  222 bits (112), Expect = 1e-54
 Identities = 151/164 (92%)
 Strand = Plus / Plus

                                                                       
Query: 54  tccaggtcacgcggttcgcgtgcgggtcgctcgtcgtggggttcaccacgcagcacatcg 113
           |||||||||||||||||||||||||||| |||| |||||| |||||| |||| ||||| |
Sbjct: 404 tccaggtcacgcggttcgcgtgcgggtccctcgccgtgggcttcaccgcgcaccacatgg 463

                                                                       
Query: 114 tgtccgacggccgctccaccggcaacttcttcgtcgcgtggagccaggccacccgcggcg 173
           |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 464 tgtccgacggccgcgccaccagcaacttcttcctcgcgtggagccaggccacccgcggcg 523

                                                       
Query: 174 ccgccatcgaccccgtcccggtgcacgaccgtgcttccttcttc 217
            ||||||| |||||||||||||||||||||| || |||||||||
Sbjct: 524 tcgccatccaccccgtcccggtgcacgaccgcgcctccttcttc 567



 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 409 cagcaccctgcagtgcgtggtggcacacctgtggcggagcatgacgatggcgcgcgggct 468
           |||||||||||||||||||||||| |||||||||||  |||| |||||||| ||||||||
Sbjct: 777 cagcaccctgcagtgcgtggtggcgcacctgtggcgctgcataacgatggctcgcgggct 836

                                                                       
Query: 469 cgacggcggggagaccaccagcgtcgccatcgccgtggacgggagagcgcggatgagccc 528
           ||| ||  | | | |||| |||||  ||||||||||||||||| | ||||||||||||||
Sbjct: 837 cgaggggagcgtggccacgagcgtgtccatcgccgtggacgggcgcgcgcggatgagccc 896

                                                          
Query: 529 gcaggtgccggacggatacaccggcaacgtcatcctctgggcgcggc 575
           || ||||| ||| || ||||| ||||||||| | |||||||| ||||
Sbjct: 897 gccggtgctggatggctacacgggcaacgtcgtgctctgggcacggc 943



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 75/85 (88%), Gaps = 3/85 (3%)
 Strand = Plus / Plus

                                                                       
Query: 309 acggcgacgaggacgaggtggtggtga---acaaggtgcacttcagccgggagttcatct 365
           ||||| |||| | ||||||||||||||   ||||||||||||||||  ||||||||||||
Sbjct: 671 acggccacgacggcgaggtggtggtgacacacaaggtgcacttcagtagggagttcatct 730

                                    
Query: 366 ccaagctcaaggcgcaggcgtcggc 390
           |||||||||||||||  ||||||||
Sbjct: 731 ccaagctcaaggcgctcgcgtcggc 755
to top
>ref|XM_450191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1359

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 60  tcacgcggttcgcgtgcgggtcgctcgtcgtggggttcac 99
           ||||||||||||||||||| ||||| | ||| ||||||||
Sbjct: 404 tcacgcggttcgcgtgcggctcgctggccgtcgggttcac 443
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 60       tcacgcggttcgcgtgcgggtcgctcgtcgtggggttcac 99
                ||||||||||||||||||| ||||| | ||| ||||||||
Sbjct: 21162711 tcacgcggttcgcgtgcggctcgctggccgtcgggttcac 21162750
to top
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0705E11
          Length = 140729

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 60    tcacgcggttcgcgtgcgggtcgctcgtcgtggggttcac 99
             ||||||||||||||||||| ||||| | ||| ||||||||
Sbjct: 33468 tcacgcggttcgcgtgcggctcgctggccgtcgggttcac 33507
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 156    gccaggccacccgcggcgccgccatcg 182
              |||||||||||| ||||||||||||||
Sbjct: 430734 gccaggccaccctcggcgccgccatcg 430760
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 158    caggccacccgcggcgccgccatcga 183
              ||||||| ||||||||||||||||||
Sbjct: 698783 caggccatccgcggcgccgccatcga 698758



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 474     gcggggagaccaccagcgtc 493
               ||||||||||||||||||||
Sbjct: 2494430 gcggggagaccaccagcgtc 2494449
to top
>ref|XM_465240.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1890

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 981  ggacggcgacgaggacgacgtggtg 1005
to top
>ref|XM_507475.1| PREDICTED Oryza sativa (japonica cultivar-group), P0572D06.2 mRNA
          Length = 2167

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 1219 ggacggcgacgaggacgacgtggtg 1243
to top
>ref|XM_506788.2| PREDICTED Oryza sativa (japonica cultivar-group), P0572D06.2 mRNA
          Length = 2830

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 1433 ggacggcgacgaggacgacgtggtg 1457
to top
>ref|XM_596207.2| PREDICTED: Bos taurus similar to myosin light chain kinase
            (LOC518025), mRNA
          Length = 1518

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 352  ccgggagttcatctccaagct 372
            |||||||||||||||||||||
Sbjct: 1317 ccgggagttcatctccaagct 1337
to top
>gb|AC073308.4| Homo sapiens BAC clone RP11-13M3 from 7, complete sequence
          Length = 154344

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 423   gcgtggtggcacacctgtggc 443
             |||||||||||||||||||||
Sbjct: 90359 gcgtggtggcacacctgtggc 90379
to top
>gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome 7, complete sequence
          Length = 190059

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 441   ggcggagcatgacgatggcgc 461
             |||||||||||||||||||||
Sbjct: 88130 ggcggagcatgacgatggcgc 88150
to top
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 466    gctcgacggcggggagaccaccagc 490
              ||||||||||| |||||||||||||
Sbjct: 128084 gctcgacggcgtggagaccaccagc 128060
to top
>dbj|AK153693.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630048N10 product:unclassifiable, full
            insert sequence
          Length = 4685

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 441  ggcggagcatgacgatggcgc 461
            |||||||||||||||||||||
Sbjct: 3436 ggcggagcatgacgatggcgc 3456
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 307      ggacggcgacgaggacgaggtggtg 331
                |||||||||||||||||| ||||||
Sbjct: 12503801 ggacggcgacgaggacgacgtggtg 12503777
to top
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0572D06
          Length = 148920

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 8334 ggacggcgacgaggacgacgtggtg 8310
to top
>dbj|AK120657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E04, full
           insert sequence
          Length = 1507

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 54  tccaggtcacgcggttcgcgtgcgg 78
           |||||||||||| ||||||||||||
Sbjct: 528 tccaggtcacgcagttcgcgtgcgg 552
to top
>dbj|AK107002.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C10, full
            insert sequence
          Length = 2167

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 1219 ggacggcgacgaggacgacgtggtg 1243
to top
>dbj|AK106848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A09, full
            insert sequence
          Length = 2830

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 1433 ggacggcgacgaggacgacgtggtg 1457
to top
>dbj|AK102703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103O07, full
            insert sequence
          Length = 1890

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 307  ggacggcgacgaggacgaggtggtg 331
            |||||||||||||||||| ||||||
Sbjct: 981  ggacggcgacgaggacgacgtggtg 1005
to top
>ref|NM_102471.3| Arabidopsis thaliana unknown protein AT1G27090 mRNA, complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 311  ggcgacgaggacgaggtggtggtg 334
            ||||| ||||||||||||||||||
Sbjct: 1231 ggcgaggaggacgaggtggtggtg 1254
to top
>ref|NM_192143.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 339

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 364 ctccaagctcaaggcgcagg 383
           ||||||||||||||||||||
Sbjct: 207 ctccaagctcaaggcgcagg 226
to top
>ref|NM_184874.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 308 gacggcgacgaggacgaggtggtggtgaacaaggtg 343
           |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 697 gacggcgaggaggaggaggaggtggtgaacagggtg 732
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 453    cgatggcgcgcgggctcgac 472
              ||||||||||||||||||||
Sbjct: 165981 cgatggcgcgcgggctcgac 166000
to top
>gb|AC079736.13| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003G23, complete sequence
          Length = 135931

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 308   gacggcgacgaggacgaggtggtggtgaacaaggtg 343
             |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 72959 gacggcgaggaggaggaggaggtggtgaacagggtg 72994
to top
>ref|XM_583699.2| PREDICTED: Bos taurus CE5 protein-like (LOC507141), mRNA
          Length = 783

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 ccacccgcggcgccgccatc 181
           ||||||||||||||||||||
Sbjct: 59  ccacccgcggcgccgccatc 78
to top
>gb|AC116450.17| Mus musculus chromosome 7, clone RP24-249O20, complete sequence
          Length = 142066

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    gagttcatctccaagctcaa 375
              ||||||||||||||||||||
Sbjct: 107332 gagttcatctccaagctcaa 107351
to top
>gb|AY317642.1| Mus musculus olfactory receptor Olfr533 (Olfr533) gene, complete
           cds
          Length = 963

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 gagttcatctccaagctcaa 375
           ||||||||||||||||||||
Sbjct: 947 gagttcatctccaagctcaa 928
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 308      gacggcgacgaggacgaggtggtggtgaacaaggtg 343
                |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 26761253 gacggcgaggaggaggaggaggtggtgaacagggtg 26761218
to top
>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete
             sequence
          Length = 169661

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 327   tggtggtgaacaaggtgcacttca 350
             |||||||||||||||||| |||||
Sbjct: 39999 tggtggtgaacaaggtgctcttca 39976
to top
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence
          Length = 186870

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 327    tggtggtgaacaaggtgcacttca 350
              |||||||||||||||||| |||||
Sbjct: 185493 tggtggtgaacaaggtgctcttca 185470
to top
>gb|AC117670.15| Mus musculus chromosome 7, clone RP23-383P11, complete sequence
          Length = 219661

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    gagttcatctccaagctcaa 375
              ||||||||||||||||||||
Sbjct: 161923 gagttcatctccaagctcaa 161904
to top
>ref|NM_001001889.1| Danio rerio catenin, beta 2 (ctnnb2), mRNA
          Length = 3550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 313 cgacgaggacgaggtggtggtgaa 336
           |||||||||| |||||||||||||
Sbjct: 647 cgacgaggaccaggtggtggtgaa 670
to top
>emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on chromosome Xq25-27.1
             Contains the 3' end of a novel gene, a serine/arginine
             repetitive matrix 1 (SRRM1) pseudogene (LOC347480), the
             GPR101 gene for G protein-coupled receptor 101 and four
             CpG islands, complete sequence
          Length = 172280

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   gcgtggtggcacacctgtgg 442
             ||||||||||||||||||||
Sbjct: 33865 gcgtggtggcacacctgtgg 33884
to top
>emb|AL157945.21| Human DNA sequence from clone RP4-628J24 on chromosome 1p36.31-36.33
            Contains the 3' end of a novel gene and a novel gene,
            complete sequence
          Length = 39094

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  gcgtggtggcacacctgtgg 442
            ||||||||||||||||||||
Sbjct: 1908 gcgtggtggcacacctgtgg 1889
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 454     gatggcgcgcgggctcgacggcgg 477
               ||||||||| ||||||||||||||
Sbjct: 2589498 gatggcgcgtgggctcgacggcgg 2589475
to top
>gb|AY091390.1| Arabidopsis thaliana unknown protein (At1g27090) mRNA, complete cds
          Length = 1294

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 311  ggcgacgaggacgaggtggtggtg 334
            ||||| ||||||||||||||||||
Sbjct: 1073 ggcgaggaggacgaggtggtggtg 1096
to top
>gb|AY074367.1| Arabidopsis thaliana unknown protein (At1g27090) mRNA, complete cds
          Length = 1552

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 311  ggcgacgaggacgaggtggtggtg 334
            ||||| ||||||||||||||||||
Sbjct: 1231 ggcgaggaggacgaggtggtggtg 1254
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    gacggccgctccaccggcaacttc 142
              |||||||||| |||||||||||||
Sbjct: 212270 gacggccgctacaccggcaacttc 212293
to top
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   ggacggcgacgaggacgagg 326
             ||||||||||||||||||||
Sbjct: 32903 ggacggcgacgaggacgagg 32884
to top
>gb|AF329680.1| Danio rerio beta-catenin 2 mRNA, complete cds
          Length = 3550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 313 cgacgaggacgaggtggtggtgaa 336
           |||||||||| |||||||||||||
Sbjct: 647 cgacgaggaccaggtggtggtgaa 670
to top
>gb|AE012420.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 328
            of 460 of the complete genome
          Length = 13708

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  cgcgcccagaccctgcagca 413
            ||||||||||||||||||||
Sbjct: 7837 cgcgcccagaccctgcagca 7818
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 396     cgcccagaccctgcagcacc 415
               ||||||||||||||||||||
Sbjct: 4462729 cgcccagaccctgcagcacc 4462748
to top
>gb|AC034111.6| Homo sapiens, clone RP11-1E4, complete sequence
          Length = 177756

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   gcgtggtggcacacctgtgg 442
             ||||||||||||||||||||
Sbjct: 60888 gcgtggtggcacacctgtgg 60869
to top
>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence
          Length = 173794

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  gcgtggtggcacacctgtgg 442
            ||||||||||||||||||||
Sbjct: 9285 gcgtggtggcacacctgtgg 9266
to top
>gb|BC056276.1| Danio rerio catenin, beta 2, mRNA (cDNA clone MGC:65770
           IMAGE:6789078), complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 313 cgacgaggacgaggtggtggtgaa 336
           |||||||||| |||||||||||||
Sbjct: 644 cgacgaggaccaggtggtggtgaa 667
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 316     cgaggacgaggtggtggtga 335
               ||||||||||||||||||||
Sbjct: 3716953 cgaggacgaggtggtggtga 3716972
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 394     cgcgcccagaccctgcagca 413
               ||||||||||||||||||||
Sbjct: 1329195 cgcgcccagaccctgcagca 1329214
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 308      gacggcgacgaggacgaggtggtggtgaacaaggtg 343
                |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 26852576 gacggcgaggaggaggaggaggtggtgaacagggtg 26852541
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 364      ctccaagctcaaggcgcagg 383
                ||||||||||||||||||||
Sbjct: 28532373 ctccaagctcaaggcgcagg 28532354
to top
>ref|NM_001011815.1| Mus musculus olfactory receptor 533 (Olfr533), mRNA
          Length = 963

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 gagttcatctccaagctcaa 375
           ||||||||||||||||||||
Sbjct: 947 gagttcatctccaagctcaa 928
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     gcggacggcgacgaggacga 324
               ||||||||||||||||||||
Sbjct: 5632372 gcggacggcgacgaggacga 5632391
to top
>gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I,
             complete sequence
          Length = 111566

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   ggcgacgaggacgaggtggtggtg 334
             ||||| ||||||||||||||||||
Sbjct: 45865 ggcgaggaggacgaggtggtggtg 45842
to top
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 163     cacccgcggcgccgccatcg 182
               ||||||||||||||||||||
Sbjct: 2988002 cacccgcggcgccgccatcg 2988021
to top
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C09
          Length = 170226

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   ctccaagctcaaggcgcagg 383
             ||||||||||||||||||||
Sbjct: 58812 ctccaagctcaaggcgcagg 58793
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 484    caccagcgtcgccatcgccg 503
              ||||||||||||||||||||
Sbjct: 971985 caccagcgtcgccatcgccg 971966
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 546     acaccggcaacgtcatcctctggg 569
               ||||||||||||||||| ||||||
Sbjct: 1691821 acaccggcaacgtcatcgtctggg 1691798
to top
>dbj|AK111438.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A04, full
            insert sequence
          Length = 1587

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  ctccaagctcaaggcgcagg 383
            ||||||||||||||||||||
Sbjct: 1002 ctccaagctcaaggcgcagg 983
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 524    agcccgcaggtgccggacgg 543
              ||||||||||||||||||||
Sbjct: 914615 agcccgcaggtgccggacgg 914634
to top
>dbj|AK064665.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B07, full
           insert sequence
          Length = 1424

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 308 gacggcgacgaggacgaggtggtggtgaacaaggtg 343
           |||||||| ||||| |||| ||||||||||| ||||
Sbjct: 666 gacggcgaggaggaggaggaggtggtgaacagggtg 701
to top
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome
          Length = 161046

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   ggacggcgacgaggacgagg 326
             ||||||||||||||||||||
Sbjct: 56855 ggacggcgacgaggacgagg 56836
to top
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    gttcaagccctacgagaagg 284
              ||||||||||||||||||||
Sbjct: 876310 gttcaagccctacgagaagg 876329
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 367    caagctcaaggcgcaggcgtcggc 390
              ||||||||||| ||||||||||||
Sbjct: 249842 caagctcaaggagcaggcgtcggc 249819
to top
>gb|U79644.1|LDU79644 Lymantria dispar nucleopolyhedrovirus, isolate 163-2, 25K FP fusion
           protein gene, complete cds
          Length = 650

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 307 ggacggcgacgaggacgagg 326
           ||||||||||||||||||||
Sbjct: 65  ggacggcgacgaggacgagg 46


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,591,256
Number of Sequences: 3902068
Number of extensions: 3591256
Number of successful extensions: 93909
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91674
Number of HSP's gapped (non-prelim): 2227
length of query: 575
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 552
effective length of database: 17,143,297,704
effective search space: 9463100332608
effective search space used: 9463100332608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top