>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                         
Query: 61    gtgttctttggggcgacgacgtacgacgtgcaccgctccatcaagaacaacgaccagccc 120
             |||||| | |||||||||||||||||||||||||| || |||||||||||||| ||||| 
Sbjct: 85548 gtgttcctcggggcgacgacgtacgacgtgcaccggtcgatcaagaacaacgagcagccg 85607

                                                                 
Query: 121   ccgaccagcgagcaggtggcggcgctccaggccttcatcgactccaggaagc 172
             |||||||  |||||| |||  || ||||||| || |||| |||||| |||||
Sbjct: 85608 ccgaccaaggagcagatggaagccctccaggactacatcaactccaagaagc 85659

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                            
Query: 61       gtgttctttggggcgacgacgtacgacgtgcaccgctccatcaagaacaacgaccagccc 120
                |||||| | |||||||||||||||||||||||||| || |||||||||||||| ||||| 
Sbjct: 21739528 gtgttcctcggggcgacgacgtacgacgtgcaccggtcgatcaagaacaacgagcagccg 21739587

                                                                    
Query: 121      ccgaccagcgagcaggtggcggcgctccaggccttcatcgactccaggaagc 172
                |||||||  |||||| |||  || ||||||| || |||| |||||| |||||
Sbjct: 21739588 ccgaccaaggagcagatggaagccctccaggactacatcaactccaagaagc 21739639

>gb|BC054630.1| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide, mRNA
            (cDNA clone MGC:64170 IMAGE:6797407), complete cds
          Length = 3336

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 544  aaactgctcttgcagcatttc 564
            |||||||||||||||||||||
Sbjct: 2939 aaactgctcttgcagcatttc 2959

>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island
          Length = 130000

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 142   gcgctccaggccttcatcgac 162
             |||||||||||||||||||||
Sbjct: 11979 gcgctccaggccttcatcgac 11999

>gb|AY028629.1| Danio rerio Na+/K+ ATPase alpha1A1 subunit mRNA, complete cds
          Length = 3270

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 544  aaactgctcttgcagcatttc 564
            |||||||||||||||||||||
Sbjct: 2941 aaactgctcttgcagcatttc 2961

>gb|AY008376.1| Danio rerio Na+/K+ ATPase alpha subunit isoform 8 (atp1a1a.4) mRNA,
            complete cds
          Length = 3262

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 544  aaactgctcttgcagcatttc 564
            |||||||||||||||||||||
Sbjct: 2960 aaactgctcttgcagcatttc 2980

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 224      agcggcggggcggcgcggtgc 244
                |||||||||||||||||||||
Sbjct: 11192929 agcggcggggcggcgcggtgc 11192909

>ref|NM_131689.1| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide
            (atp1a1a.4), mRNA
          Length = 3270

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 544  aaactgctcttgcagcatttc 564
            |||||||||||||||||||||
Sbjct: 2941 aaactgctcttgcagcatttc 2961

>gb|BC090285.1| Danio rerio ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide,
           mRNA (cDNA clone IMAGE:7135968), partial cds
          Length = 1020

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 544 aaactgctcttgcagcatttc 564
           |||||||||||||||||||||
Sbjct: 710 aaactgctcttgcagcatttc 730

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 42     gctgctcgccgcagggctggtgttc 66
              |||||||||||| ||||||||||||
Sbjct: 807869 gctgctcgccgccgggctggtgttc 807845

>gb|AC138292.20| Mus musculus chromosome 10, clone RP23-361K13, complete sequence
          Length = 166235

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   ctagcagaggcaggctgaaga 474
             |||||||||||||||||||||
Sbjct: 53172 ctagcagaggcaggctgaaga 53192

>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09,
             complete sequence
          Length = 141580

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 224   agcggcggggcggcgcggtgc 244
             |||||||||||||||||||||
Sbjct: 61553 agcggcggggcggcgcggtgc 61533

>ref|XM_478181.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 522

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 cctcagcgagcggcggggcg 235
           ||||||||||||||||||||
Sbjct: 441 cctcagcgagcggcggggcg 422

>gb|AC114640.11| Mus musculus chromosome 17, clone RP24-125I7, complete sequence
          Length = 190102

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    tatggatgtatgtatataga 383
              ||||||||||||||||||||
Sbjct: 134368 tatggatgtatgtatataga 134349

>gb|AC127588.3| Mus musculus BAC clone RP23-106G21 from chromosome 18, complete
             sequence
          Length = 180320

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   tatggatgtatgtatataga 383
             ||||||||||||||||||||
Sbjct: 89270 tatggatgtatgtatataga 89251

>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete
            sequence
          Length = 168197

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 451  ttcctagcagaggcaggctg 470
            ||||||||||||||||||||
Sbjct: 9746 ttcctagcagaggcaggctg 9765

>gb|AC121856.3| Mus musculus BAC clone RP24-97G6 from chromosome 5, complete sequence
          Length = 195640

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   ttcctagcagaggcaggctg 470
             ||||||||||||||||||||
Sbjct: 17346 ttcctagcagaggcaggctg 17327

>emb|AL445489.10| Human DNA sequence from clone RP11-230L22 on chromosome 9 Contains the
             3' end of a gene for a novel delta-notch like protein
             (FLJ38464), the 5' end of the gene for a novel protein
             (KIAA1608), a novel gene and two CpG islands, complete
             sequence
          Length = 175869

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 450   attcctagcagaggcaggctgaag 473
             |||||||| |||||||||||||||
Sbjct: 76304 attcctaggagaggcaggctgaag 76281

>ref|XM_504011.1| Yarrowia lipolytica CLIB122, YALI0E16214g predicted mRNA
          Length = 876

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 tccaggccttcatcgactcc 165
           ||||||||||||||||||||
Sbjct: 809 tccaggccttcatcgactcc 828

>emb|AL078477.5|HSDJ259N9 Human DNA sequence from clone RP1-69B10 on chromosome 11p13 Contains a
             pseudogene similar to heterogeneous nuclear
             ribonucleoprotein, the gene for GA17 protein, ESTs, STSs,
             GSSs and a CpG island, complete sequence
          Length = 107652

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   actctgttcttgaaacagct 528
             ||||||||||||||||||||
Sbjct: 27738 actctgttcttgaaacagct 27719

>emb|X08038.1|MTRPO Methanobacterium thermoautotrophicum rpoT, rpoU, rpoV and rpoX
           genes for RNA polymerase subunits A, B', B'' and C
          Length = 7538

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 245 atatgcttgtgatgatctct 264
           ||||||||||||||||||||
Sbjct: 806 atatgcttgtgatgatctct 787

>gb|AC103773.2| Homo sapiens chromosome 8, clone RP11-164P24, complete sequence
          Length = 163083

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    aatgtgtacactggtcatgt 506
              ||||||||||||||||||||
Sbjct: 145655 aatgtgtacactggtcatgt 145674

>tpg|BK005012.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
           transcription factor 9 (WRKY9) gene, complete cds
          Length = 8241

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 gtgcatatgcttgtgatgat 260
           ||||||||||||||||||||
Sbjct: 872 gtgcatatgcttgtgatgat 853

>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 467  gctgaagaatctagtagtagaatg 490
            ||||||||||||||| ||||||||
Sbjct: 1393 gctgaagaatctagtggtagaatg 1416

>gb|AC026241.7| Homo sapiens, clone RP11-698O20, complete sequence
          Length = 196145

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   aatgtgtacactggtcatgt 506
             ||||||||||||||||||||
Sbjct: 87925 aatgtgtacactggtcatgt 87906

>gb|AY144146.1|AY144146S1 Mus dunni MHC class I antigen (MuduTL) gene, MuduTL-1202 allele,
           exons 2 and 3 and partial cds
          Length = 853

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 tgcttgtgatgatctctgtc 267
           ||||||||||||||||||||
Sbjct: 207 tgcttgtgatgatctctgtc 188

>gb|AY144142.1|AY144142S1 Mus cookii MHC class I antigen (MucoTL) gene, MucoTL-1002 allele,
           exons 2 and 3 and partial cds
          Length = 917

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 tgcttgtgatgatctctgtc 267
           ||||||||||||||||||||
Sbjct: 207 tgcttgtgatgatctctgtc 188

>gb|AY144140.1|AY144140S1 Mus cookii MHC class I antigen (MucoTL) gene, MucoTL-1001 allele,
           exons 2 and 3 and partial cds
          Length = 925

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 tgcttgtgatgatctctgtc 267
           ||||||||||||||||||||
Sbjct: 207 tgcttgtgatgatctctgtc 188

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     gggcggccgccggcaccgat 201
               ||||||||||||||||||||
Sbjct: 2011703 gggcggccgccggcaccgat 2011722

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 216      cctcagcgagcggcggggcg 235
                ||||||||||||||||||||
Sbjct: 18254619 cctcagcgagcggcggggcg 18254638

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 241      gtgcatatgcttgtgatgat 260
                ||||||||||||||||||||
Sbjct: 10469507 gtgcatatgcttgtgatgat 10469488

>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0469E05
          Length = 160769

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    gtgcatatgcttgtgatgat 260
              ||||||||||||||||||||
Sbjct: 114467 gtgcatatgcttgtgatgat 114448

>gb|AC078920.17| Homo sapiens 12 BAC RP11-121G22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156323

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    attattccccaaaggaggaa 348
              ||||||||||||||||||||
Sbjct: 140311 attattccccaaaggaggaa 140330

>ref|XM_236927.3| PREDICTED: Rattus norvegicus similar to p53-associated parkin-like
            cytoplasmic protein (LOC316228), mRNA
          Length = 7617

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   tgctgctcgccgcagggctg 60
            ||||||||||||||||||||
Sbjct: 6269 tgctgctcgccgcagggctg 6288

>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1218_C12
          Length = 105861

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   cctcagcgagcggcggggcg 235
             ||||||||||||||||||||
Sbjct: 57862 cctcagcgagcggcggggcg 57881

>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence
          Length = 170353

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  tatggatgtatgtatataga 383
            ||||||||||||||||||||
Sbjct: 2675 tatggatgtatgtatataga 2656

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 146     tccaggccttcatcgactcc 165
               ||||||||||||||||||||
Sbjct: 1925559 tccaggccttcatcgactcc 1925578


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,447,460
Number of Sequences: 3902068
Number of extensions: 4447460
Number of successful extensions: 92131
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91773
Number of HSP's gapped (non-prelim): 358
length of query: 567
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 544
effective length of database: 17,143,297,704
effective search space: 9325953950976
effective search space used: 9325953950976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)