ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd17g18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119152 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119093 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119033 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118973 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118913 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118853 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118852 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 118793 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118792 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 118733 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118732 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 118673 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118672 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 118613 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 118612 gccccgaaaac 118602 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96004 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96063 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96123 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96124 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96183 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96184 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96243 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96244 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96303 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96304 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 96363 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96364 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 96423 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96424 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 96483 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96484 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 96543 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 96544 gccccgaaaac 96554
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119152 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119093 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119033 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118973 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118913 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118853 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118852 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 118793 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118792 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 118733 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118732 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 118673 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118672 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 118613 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 118612 gccccgaaaac 118602 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96004 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96063 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96123 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96124 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96183 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96184 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96243 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96244 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96303 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96304 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 96363 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96364 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 96423 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96424 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 96483 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96484 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 96543 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 96544 gccccgaaaac 96554
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119101 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119042 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119041 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 118982 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118981 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118922 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118921 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118862 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118861 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118802 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118801 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 118742 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118741 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 118682 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118681 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 118622 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118621 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 118562 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 118561 gccccgaaaac 118551 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95949 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96008 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96009 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96068 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96069 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96128 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96188 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96248 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96249 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 96308 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96309 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 96368 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96369 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 96428 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96429 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 96488 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 96489 gccccgaaaac 96499
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31508582 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 31508641 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508642 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 31508701 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508702 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 31508761 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508762 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 31508821 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508822 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 31508881 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508882 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 31508941 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508942 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 31509001 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509002 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 31509061 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509062 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 31509121 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 31509122 gccccgaaaac 31509132 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Minus Query: 204 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 264 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 324 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 384 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 444 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 504 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 11512970 Score = 480 bits (242), Expect = e-132 Identities = 245/246 (99%) Strand = Plus / Minus Query: 306 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 366 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 426 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 486 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 545 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 546 gaaaac 551 |||||| Sbjct: 27320423 gaaaac 27320418 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 220 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 279 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 280 taaaggaggtggggg 294 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 223 gtcgagagggaaacagcccggatcaccagctaaggccc 260 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 122 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 176 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84014 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 83955 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83954 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 83895 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83894 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 83835 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83834 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 83775 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83774 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 83715 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83714 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 83655 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83654 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 83595 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83594 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 83535 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83534 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 83475 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 83474 gccccgaaaac 83464
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119121 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119062 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119061 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119002 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119001 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118942 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118941 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118882 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118881 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118822 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118821 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 118762 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118761 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 118702 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118701 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 118642 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118641 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 118582 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 118581 gccccgaaaac 118571 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95997 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96056 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96057 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96116 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96117 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96176 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96177 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96236 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96237 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96296 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96297 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 96356 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96357 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 96416 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96417 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 96476 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96477 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 96536 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 96537 gccccgaaaac 96547
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123045 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 123104 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123105 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 123164 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123165 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 123224 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123225 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 123284 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123285 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 123344 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123345 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 123404 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123405 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 123464 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123465 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 123524 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123525 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 123584 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 123585 gccccgaaaac 123595 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14771 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 14830 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14831 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 14890 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14891 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 14950 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14951 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 15010 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15011 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 15070 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15071 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 15130 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15131 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 15190 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15191 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 15250 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15251 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 15310 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 15311 gccccgaaaac 15321
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 141579 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 141638 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141639 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 141698 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141699 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 141758 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141759 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 141818 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141819 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 141878 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141879 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 141938 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141939 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 141998 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141999 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 142058 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142059 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 142118 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 142119 gccccgaaaac 142129
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9268931 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9268990 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268991 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9269050 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269051 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9269110 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269111 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9269170 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269171 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9269230 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269231 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 9269290 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269291 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 9269350 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269351 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 9269410 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269411 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 9269470 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 9269471 gccccgaaaac 9269481 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9228431 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9228490 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228491 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9228550 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228551 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9228610 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228611 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9228670 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228671 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9228730 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228731 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 9228790 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228791 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 9228850 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228851 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 9228910 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228911 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 9228970 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 9228971 gccccgaaaac 9228981 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9165019 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9165078 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165079 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9165138 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165139 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9165198 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165199 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9165258 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165259 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9165318 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165319 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 9165378 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165379 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 9165438 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165439 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 9165498 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165499 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 9165558 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 9165559 gccccgaaaac 9165569 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9056845 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9056904 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056905 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9056964 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056965 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9057024 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057025 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9057084 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057085 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9057144 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057145 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 9057204 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057205 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 9057264 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057265 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 9057324 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057325 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 9057384 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 9057385 gccccgaaaac 9057395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19938916 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 19938975 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938976 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 19939035 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939036 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 19939095 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939096 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 19939155 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939156 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 19939215 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939216 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 19939275 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939276 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 19939335 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939336 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 19939395 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939396 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 19939455 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 19939456 gccccgaaaac 19939466 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10387783 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 10387842 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387843 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 10387902 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387903 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 10387962 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387963 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 10388022 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388023 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 10388082 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388083 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 10388142 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388143 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 10388202 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388203 tcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggggg 10388262 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388263 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 10388322 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 10388323 gccccgaaaac 10388333 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10276515 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 10276456 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276455 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 10276396 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276395 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 10276336 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276335 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 10276276 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276275 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 10276216 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276215 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 10276156 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10276155 atcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatg 10276096 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276095 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 10276036 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276035 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 10275976 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 10275975 gccccgaaaac 10275965 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagc 398 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 129 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 188 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 189 tcggccagtgagacgatgggggataagcttcatcgtcgagag 230 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9241350 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9241291 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241290 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9241231 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241230 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9241171 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241170 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9241111 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241110 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9241051 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241050 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 9240991 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240990 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 9240931 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240930 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 9240871 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240870 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 9240811 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 9240810 gccccgaaaac 9240800 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 94 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 153 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 154 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 213 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 214 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 259 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 248 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 301 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 302 acagccaggaggtttgcctagaagcagccaccctttaaagag 343 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 409 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 455 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagct 412 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 247 accagctaaggcccctaaatgaccgctcagtgataaagga 286 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31599098 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 31599157 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599158 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 31599217 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599218 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 31599277 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599278 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 31599337 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599338 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 31599397 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599398 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 31599457 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599458 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 31599517 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599518 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 31599577 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599578 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 31599637 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 31599638 gccccgaaaac 31599648 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Minus Query: 204 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 264 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 324 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 384 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 444 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 504 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 11509733 Score = 480 bits (242), Expect = e-132 Identities = 245/246 (99%) Strand = Plus / Minus Query: 306 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 366 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 426 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 486 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 545 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 546 gaaaac 551 |||||| Sbjct: 27411746 gaaaac 27411741 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 220 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 279 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 280 taaaggaggtggggg 294 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 223 gtcgagagggaaacagcccggatcaccagctaaggccc 260 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 122 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 176 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 47127 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 47068 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47067 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 47008 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47007 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 46948 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46947 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 46888 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46887 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 46828 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46827 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 46768 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46767 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 46708 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46707 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 46648 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46647 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 46588 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 46587 gccccgaaaac 46577
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 52563 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 52504 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52503 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 52444 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52443 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 52384 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52383 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 52324 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52323 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 52264 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52263 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 52204 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52203 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 52144 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52143 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 52084 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52083 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 52024 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 52023 gccccgaaaac 52013
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 383 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 442 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 502 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 562 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 622 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 682 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 742 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 802 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 862 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 863 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 922 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 923 gccccgaaaac 933
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 578 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 637 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 697 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 757 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 817 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 877 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 937 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 997 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 1057 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 1117 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1118 gccccgaaaac 1128
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 449 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 508 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 568 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 628 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 688 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 748 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 808 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 868 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 928 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 988 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 989 gccccgaaaac 999
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 199 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 258 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 318 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 378 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 438 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 498 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 558 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 618 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 678 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 738 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 739 gccccgaaaac 749
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 578 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 637 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 697 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 757 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 817 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 877 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 937 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 997 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 1057 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 1117 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1118 gccccgaaaac 1128
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19950192 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 19950251 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950252 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 19950311 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950312 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 19950371 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950372 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 19950431 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950432 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 19950491 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950492 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 19950551 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950552 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 19950611 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950612 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 19950671 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950672 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 19950731 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 19950732 gccccgaaaac 19950742 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10393822 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 10393881 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393882 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 10393941 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393942 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 10394001 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394002 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 10394061 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394062 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 10394121 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394122 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 10394181 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394182 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 10394241 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394242 tcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggggg 10394301 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394302 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 10394361 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 10394362 gccccgaaaac 10394372 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10282554 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 10282495 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282494 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 10282435 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282434 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 10282375 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282374 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 10282315 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282314 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 10282255 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282254 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 10282195 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10282194 atcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatg 10282135 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282134 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 10282075 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282074 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 10282015 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 10282014 gccccgaaaac 10282004 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagc 398 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 129 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 188 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 189 tcggccagtgagacgatgggggataagcttcatcgtcgagag 230 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119095 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119036 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119035 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 118976 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118975 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118916 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118915 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118856 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118855 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118796 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118795 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 118736 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118735 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 118676 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118675 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 118616 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118615 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 118556 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 118555 gccccgaaaac 118545 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95944 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96003 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96004 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96063 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96123 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96124 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96183 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96184 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96243 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96244 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 96303 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96304 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 96363 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96364 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 96423 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96424 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 96483 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 96484 gccccgaaaac 96494
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119287 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119228 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119227 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119168 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119167 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 119108 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119107 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 119048 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119047 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118988 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118987 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 118928 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118927 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 118868 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118867 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 118808 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118807 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 118748 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 118747 gccccgaaaac 118737 Score = 1078 bits (544), Expect = 0.0 Identities = 549/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95607 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 95666 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95667 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 95726 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95727 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 95786 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95787 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 95846 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95847 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 95906 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95907 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 95966 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95967 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 96026 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96027 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 96086 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96087 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 96146 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 96147 gccccgaaaac 96157
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1072 bits (541), Expect = 0.0 Identities = 546/548 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33526414 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 33526473 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526474 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 33526533 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526534 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 33526593 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526594 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 33526653 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526654 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 33526713 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526714 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 33526773 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526774 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 33526833 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526834 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 33526893 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526894 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 33526953 Query: 541 gccccgaa 548 |||||||| Sbjct: 33526954 gccccgaa 33526961 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 213 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 272 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 273 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 332 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 333 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 393 ctaagcgatctgccgaagctgtgggatgtcaaaat 427 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 93.7 bits (47), Expect = 6e-16 Identities = 103/119 (86%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaac 1076662 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 401 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 429 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 488 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 489 gcggaagcgagaatgtcggcttgagtaac 517 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 ttgagtaacgaaaacattggtgagaatc 536 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1072 bits (541), Expect = 0.0 Identities = 546/548 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 71611 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 71670 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71671 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 71730 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71731 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 71790 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71791 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 71850 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71851 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 71910 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71911 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 71970 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71971 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 72030 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72031 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 72090 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72091 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 72150 Query: 541 gccccgaa 548 |||||||| Sbjct: 72151 gccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 509 ttgagtaacgaaaacattggtgagaatc 536 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118068 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 118009 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118008 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 117949 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117948 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 117889 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117888 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 117829 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117828 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 117769 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117768 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 117709 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 117708 atcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatg 117649 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117648 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 117589 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117588 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 117529 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 117528 gccccgaaaac 117518
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 94175 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 94234 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94235 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 94294 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94295 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 94354 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94355 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 94414 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94415 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 94474 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94475 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 94534 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94535 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 94594 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 94595 tcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggggg 94654 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94655 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 94714 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 94715 gccccgaaaac 94725
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 21006 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 21065 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21066 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 21125 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21126 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 21185 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21186 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 21245 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21246 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 21305 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21306 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 21365 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21366 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 21425 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 21426 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 21485 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21486 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 21545 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 21546 gccccgaaaac 21556 Score = 1049 bits (529), Expect = 0.0 Identities = 547/552 (99%), Gaps = 1/552 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtg-aaatgccactcgaacccagnactagctggttctccccgaaat 59 ||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||| Sbjct: 44112 agttgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaat 44053 Query: 60 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44052 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 43993 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43992 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 43933 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43932 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 43873 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43872 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 43813 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43812 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 43753 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43752 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 43693 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43692 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggg 43633 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43632 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 43573 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 43572 tgccccgaaaac 43561
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 57840 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 57781 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57780 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 57721 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57720 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 57661 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57660 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 57601 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57600 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 57541 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57540 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 57481 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 57480 atcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatg 57421 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57420 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 57361 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57360 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 57301 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 57300 gccccgaaaac 57290
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 741 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 682 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 622 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 562 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 502 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 442 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 382 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 322 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 321 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 262 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 202 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 201 gccccgaaaac 191
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 28239 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 28298 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28299 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 28358 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28359 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 28418 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28419 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 28478 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28479 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 28538 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28539 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 28598 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28599 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 28658 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 28659 tcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggggg 28718 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28719 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 28778 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 28779 gccccgaaaac 28789
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122951 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 122892 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122891 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 122832 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122831 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 122772 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122771 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 122712 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122711 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 122652 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122651 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 122592 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122591 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 122532 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122531 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 122472 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122471 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 122412 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 122411 gccccgaaaac 122401 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99886 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 99945 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99946 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 100005 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100006 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 100065 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100066 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100125 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100126 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 100185 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100186 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 100245 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100246 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 100305 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100306 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 100365 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100366 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 100425 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 100426 gccccgaaaac 100436
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 577 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 636 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 696 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 756 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 816 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 817 cggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaa 876 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 936 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 996 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 1056 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 1116 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1117 gccccgaaaac 1127
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 201 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 260 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 320 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 380 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 440 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 500 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 560 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 620 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 680 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 ttgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 740 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 741 gccccgaaaac 751
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123668 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 123609 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123608 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 123549 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123548 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 123489 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123488 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 123429 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123428 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 123369 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123368 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 123309 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123308 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 123249 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123248 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 123189 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123188 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 123129 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 123128 gccccgaaaac 123118 Score = 1070 bits (540), Expect = 0.0 Identities = 548/551 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100563 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 100622 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100623 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 100682 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100683 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 100742 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100743 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100802 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100803 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 100862 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100863 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 100922 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100923 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 100982 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100983 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 101042 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101043 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 101102 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 101103 gccccgaaaac 101113
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1037 bits (523), Expect = 0.0 Identities = 528/530 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 580 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 639 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 699 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 759 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 819 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 879 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 939 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 999 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 1059 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 530 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122891 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 122832 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122831 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctg 122773 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122772 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 122713 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122712 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 122653 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122652 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 122593 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122592 gacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 122533 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122532 a-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 122474 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122473 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 122414 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122413 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 122354 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 122353 gccccgaaaac 122343 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99846 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 99905 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99906 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctg 99964 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99965 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 100024 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100025 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100084 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 100085 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 100144 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100145 gacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 100204 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100205 a-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 100263 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100264 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 100323 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100324 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 100383 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 100384 gccccgaaaac 100394
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 6199 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 6258 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 6259 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctg 6317 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6318 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 6377 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6378 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 6437 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 6438 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 6497 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6498 gacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 6557 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6558 a-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 6616 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6617 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 6676 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6677 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 6736 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 6737 gccccgaaaac 6747
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1007 bits (508), Expect = 0.0 Identities = 542/551 (98%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 787 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 846 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 847 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctg 905 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 965 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1025 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1026 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 1085 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1086 gacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 1145 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1146 a-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1204 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1205 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggggg 1264 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 1324 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1325 gccccgaaaac 1335
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 944 bits (476), Expect = 0.0 Identities = 532/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 774 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 833 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 834 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 893 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 894 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactgg 953 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 954 ggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcc 1013 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1014 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 1073 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1074 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1133 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1193 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 1194 tcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcgg 1253 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1254 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 1313 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1314 gccccgaaaac 1324
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 944 bits (476), Expect = 0.0 Identities = 532/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 132223 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 132164 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 132163 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 132104 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 132103 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactgg 132044 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132043 ggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcc 131984 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 131983 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 131924 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131923 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 131864 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131863 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 131804 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 131803 tcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcgg 131744 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131743 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 131684 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 131683 gccccgaaaac 131673 Score = 944 bits (476), Expect = 0.0 Identities = 532/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104541 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 104600 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104601 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 104660 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 104661 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactgg 104720 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104721 ggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcc 104780 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 104781 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 104840 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104841 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 104900 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104901 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 104960 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 104961 tcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcgg 105020 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105021 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 105080 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 105081 gccccgaaaac 105091
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 944 bits (476), Expect = 0.0 Identities = 532/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133184 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 133125 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133124 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 133065 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 133064 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactgg 133005 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133004 ggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcc 132945 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 132944 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 132885 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 132884 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 132825 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132824 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 132765 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 132764 tcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcgg 132705 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132704 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 132645 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 132644 gccccgaaaac 132634 Score = 944 bits (476), Expect = 0.0 Identities = 532/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 105465 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 105524 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 105525 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 105584 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 105585 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactgg 105644 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105645 ggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcc 105704 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 105705 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 105764 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105765 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 105824 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105825 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 105884 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || Sbjct: 105885 tcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcgg 105944 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105945 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106004 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106005 gccccgaaaac 106015
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 936 bits (472), Expect = 0.0 Identities = 531/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138729 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 138670 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138669 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 138610 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138609 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 138550 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138549 ggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 138490 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 138489 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 138430 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138429 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 138370 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138369 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 138310 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| | Sbjct: 138309 taaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggag 138250 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138249 tagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 138190 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 138189 gccccgaaaac 138179 Score = 936 bits (472), Expect = 0.0 Identities = 531/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110368 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 110427 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110428 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 110487 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110488 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 110547 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110548 ggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 110607 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 110608 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 110667 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110668 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 110727 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110728 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 110787 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| | Sbjct: 110788 taaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggag 110847 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110848 tagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 110907 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 110908 gccccgaaaac 110918
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 936 bits (472), Expect = 0.0 Identities = 531/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 141332 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 141273 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141272 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 141213 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141212 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacagg 141153 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141152 ggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 141093 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 141092 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 141033 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141032 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 140973 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 140972 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 140913 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || | Sbjct: 140912 taaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtg 140853 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 140852 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 140793 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 140792 gccccgaaaac 140782 Score = 936 bits (472), Expect = 0.0 Identities = 531/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112325 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112384 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 112385 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 112444 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112445 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacagg 112504 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112505 ggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 112564 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 112565 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 112624 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112625 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 112684 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112685 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 112744 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || | Sbjct: 112745 taaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtg 112804 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 112805 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 112864 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 112865 gccccgaaaac 112875
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 936 bits (472), Expect = 0.0 Identities = 531/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138934 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 138875 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138874 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 138815 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 138814 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataatagg 138755 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138754 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 138695 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 138694 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 138635 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138634 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 138575 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138574 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 138515 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| |||||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 138514 taaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcagggg 138455 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138454 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 138395 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 138394 gccccgaaaac 138384 Score = 936 bits (472), Expect = 0.0 Identities = 531/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110365 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 110424 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110425 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 110484 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 110485 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataatagg 110544 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110545 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 110604 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 110605 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 110664 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110665 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 110724 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110725 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 110784 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| |||||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 110785 taaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcagggg 110844 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110845 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 110904 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 110905 gccccgaaaac 110915
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 934 bits (471), Expect = 0.0 Identities = 531/551 (96%), Gaps = 4/551 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 127088 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 127029 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127028 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 126969 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 126968 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa----cagg 126913 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126912 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 126853 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 126852 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 126793 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 126792 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 126733 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 126732 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 126673 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || | Sbjct: 126672 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtg 126613 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 126612 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 126553 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 126552 gccccgaaaac 126542 Score = 934 bits (471), Expect = 0.0 Identities = 531/551 (96%), Gaps = 4/551 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107834 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 107893 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107894 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107953 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 107954 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa----cagg 108009 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108010 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 108069 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 108070 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 108129 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108130 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 108189 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 108190 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 108249 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || | Sbjct: 108250 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtg 108309 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 108310 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 108369 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 108370 gccccgaaaac 108380
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 928 bits (468), Expect = 0.0 Identities = 530/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130892 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 130833 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130832 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 130773 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 130772 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 130713 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130712 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 130653 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 130652 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 130593 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130592 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 130533 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130532 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 130473 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | Sbjct: 130472 taaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtag 130413 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 130412 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 130353 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 130352 gccccgaaaac 130342 Score = 928 bits (468), Expect = 0.0 Identities = 530/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103743 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 103802 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103803 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 103862 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 103863 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 103922 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103923 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 103982 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 103983 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 104042 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104043 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 104102 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104103 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 104162 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | Sbjct: 104163 taaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtag 104222 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104223 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 104282 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 104283 gccccgaaaac 104293
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 132000 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 131941 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131940 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 131881 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131880 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 131821 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131820 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 131761 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 131760 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 131701 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131700 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 131641 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131640 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 131581 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | Sbjct: 131580 taaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtag 131521 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131520 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 131461 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 131460 gccccgaaaac 131450 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104878 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 104937 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104938 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 104997 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104998 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 105057 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105058 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 105117 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 105118 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 105177 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105178 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 105237 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105238 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 105297 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | Sbjct: 105298 taaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtag 105357 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105358 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 105417 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 105418 gccccgaaaac 105428
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135126 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 135067 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135066 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 135007 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 135006 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacagg 134947 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134946 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 134887 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 134886 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 134827 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134826 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134767 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134766 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 134707 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | | Sbjct: 134706 taaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttg 134647 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134646 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134587 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134586 gccccgaaaac 134576 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106780 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106839 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106840 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106899 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 106900 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacagg 106959 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106960 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 107019 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 107020 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 107079 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107080 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 107139 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107140 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107199 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | | Sbjct: 107200 taaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttg 107259 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107260 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107319 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107320 gccccgaaaac 107330
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135817 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 135758 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135757 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 135698 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135697 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 135638 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135637 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 135578 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 135577 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 135518 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135517 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 135458 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135457 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 135398 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| | Sbjct: 135397 taaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtag 135338 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135337 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 135278 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 135277 gccccgaaaac 135267 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106608 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106667 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106668 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106727 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106728 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 106787 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106847 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106848 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106907 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106908 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106967 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106968 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107027 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| | Sbjct: 107028 taaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggtag 107087 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107088 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107147 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107148 gccccgaaaac 107158
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135405 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 135346 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135345 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 135286 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 135285 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacagg 135226 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135225 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 135166 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 135165 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 135106 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135105 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 135046 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135045 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 134986 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | | Sbjct: 134985 taaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttg 134926 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134925 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134866 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134865 gccccgaaaac 134855 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107002 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 107061 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107062 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107121 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 107122 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacagg 107181 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107182 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 107241 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 107242 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 107301 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107302 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 107361 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107362 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107421 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | | Sbjct: 107422 taaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttg 107481 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107482 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107541 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107542 gccccgaaaac 107552
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 920 bits (464), Expect = 0.0 Identities = 530/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133447 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 133388 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 133387 cgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccg 133328 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 133327 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcacagg 133268 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133267 g-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 133209 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 133208 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 133149 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 133148 gacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactg 133089 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133088 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 133029 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| || | Sbjct: 133028 taaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtg 132969 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132968 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 132909 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 132908 gccccgaaaac 132898 Score = 920 bits (464), Expect = 0.0 Identities = 530/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104524 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 104583 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 104584 cgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccg 104643 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104644 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcacagg 104703 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104704 g-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 104762 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 104763 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 104822 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 104823 gacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactg 104882 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104883 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 104942 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| || | Sbjct: 104943 taaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtg 105002 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105003 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 105062 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 105063 gccccgaaaac 105073
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131993 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 131934 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131933 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 131874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131873 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 131814 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131813 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 131754 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 131753 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 131694 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 131693 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 131634 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131633 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 131574 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | Sbjct: 131573 taaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtag 131514 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131513 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 131454 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 131453 gccccgaaaac 131443 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104876 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 104935 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104936 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 104995 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104996 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 105055 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105056 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 105115 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 105116 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 105175 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 105176 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 105235 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105236 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 105295 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| | Sbjct: 105296 taaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtag 105355 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105356 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 105415 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 105416 gccccgaaaac 105426
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 920 bits (464), Expect = 0.0 Identities = 529/551 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 776 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 835 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 836 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 895 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 896 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 955 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1015 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1016 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 1075 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1076 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1135 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1195 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||| |||||||||||||||||||||||||||| |||||||| | ||| ||| | || Sbjct: 1196 taaaaaggcatcggtaggggagcgttccgccttagggggaagcacctgcgcgagcagcgg 1255 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1256 tagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 1315 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1316 gccccgaaaac 1326
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 914 bits (461), Expect = 0.0 Identities = 532/556 (95%), Gaps = 5/556 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138810 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 138751 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138750 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 138691 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaata 175 || ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138690 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaata 138631 Query: 176 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138630 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 138571 Query: 236 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138570 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 138511 Query: 296 gcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagct 355 ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 138510 gcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagct 138451 Query: 356 cactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138450 cactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtg 138391 Query: 416 ggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc 475 |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 138390 ggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagc 138331 Query: 476 gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaat 535 || || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 138330 aggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaat 138271 Query: 536 ccaatgccccgaaaac 551 |||||||||||||||| Sbjct: 138270 ccaatgccccgaaaac 138255 Score = 914 bits (461), Expect = 0.0 Identities = 532/556 (95%), Gaps = 5/556 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111135 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 111194 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111195 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 111254 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaata 175 || ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111255 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaata 111314 Query: 176 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111315 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 111374 Query: 236 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111375 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 111434 Query: 296 gcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagct 355 ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111435 gcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagct 111494 Query: 356 cactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 111495 cactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtg 111554 Query: 416 ggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc 475 |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 111555 ggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagc 111614 Query: 476 gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaat 535 || || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 111615 aggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaat 111674 Query: 536 ccaatgccccgaaaac 551 |||||||||||||||| Sbjct: 111675 ccaatgccccgaaaac 111690
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135525 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 135466 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135465 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 135406 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135405 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 135346 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135345 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 135286 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 135285 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 135226 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135225 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 135166 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 135106 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 135105 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 135046 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135045 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134986 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134985 gccccgaaaac 134975 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107105 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 107164 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107165 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107224 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107225 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 107284 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107285 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 107344 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 107345 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 107404 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107405 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 107464 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107465 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107524 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 107525 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 107584 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107585 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107644 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107645 gccccgaaaac 107655
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 136163 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 136104 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 136103 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 136044 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 136043 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 135984 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135983 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 135924 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 135923 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 135864 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135863 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 135804 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135803 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 135744 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 135743 taaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtgg 135684 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135683 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 135624 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 135623 gccccgaaaac 135613 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107394 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 107453 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107454 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107513 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107514 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 107573 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107574 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 107633 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 107634 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 107693 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107694 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 107753 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107754 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107813 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 107814 taaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggtgg 107873 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107874 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107933 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107934 gccccgaaaac 107944
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2299 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 2358 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2359 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 2418 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2419 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 2478 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2479 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 2538 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 2539 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 2598 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2599 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 2658 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2659 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 2718 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 2719 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 2778 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2779 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 2838 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 2839 gccccgaaaac 2849
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134771 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134712 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134711 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134652 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134651 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 134592 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134591 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 134532 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 134531 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 134472 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134471 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134412 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134411 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 134352 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134351 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 134292 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134291 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134232 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134231 gccccgaaaac 134221 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106265 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106324 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106325 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106384 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106385 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 106444 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106445 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106504 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106505 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106564 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106565 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106624 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106625 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 106684 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 106685 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 106744 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106745 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106804 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106805 gccccgaaaac 106815
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134906 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134847 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134846 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134787 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134786 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 134727 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134726 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 134667 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 134666 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 134607 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134606 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134547 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134546 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 134487 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134486 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 134427 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134426 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134367 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134366 gccccgaaaac 134356 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106437 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106496 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106497 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106556 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106557 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 106616 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106617 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106676 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106677 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106736 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106737 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106796 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106797 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 106856 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 106857 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 106916 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106917 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106976 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106977 gccccgaaaac 106987
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134904 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134845 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134844 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134785 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134784 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 134725 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134724 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 134665 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 134664 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 134605 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134604 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134545 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134544 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 134485 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134484 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 134425 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134424 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134365 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134364 gccccgaaaac 134354 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106434 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106493 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106494 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106553 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106554 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 106613 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106614 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106673 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106674 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106733 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106734 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106793 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106794 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 106853 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 106854 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 106913 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106914 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106973 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106974 gccccgaaaac 106984
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134816 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134757 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134756 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134697 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134696 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 134637 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134636 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 134577 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 134576 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 134517 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134516 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134457 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134456 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 134397 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134396 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 134337 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134336 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134277 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134276 gccccgaaaac 134266 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106312 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106371 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106372 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106431 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106432 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 106491 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106492 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106551 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106552 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106611 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106612 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106671 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106672 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 106731 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 106732 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 106791 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106792 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106851 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106852 gccccgaaaac 106862
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135523 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 135464 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135463 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 135404 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135403 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 135344 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135343 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 135284 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 135283 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 135224 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 135223 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 135164 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135163 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 135104 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 135103 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 135044 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135043 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134984 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134983 gccccgaaaac 134973 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107103 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 107162 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107163 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107222 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107223 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 107282 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107283 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 107342 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 107343 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 107402 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107403 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 107462 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107463 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107522 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 107523 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 107582 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107583 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107642 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107643 gccccgaaaac 107653
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135254 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 135195 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135194 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 135135 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135134 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 135075 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135074 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 135015 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 135014 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 134955 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134954 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134895 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134894 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 134835 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134834 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 134775 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134774 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134715 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134714 gccccgaaaac 134704 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106884 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106943 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106944 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107003 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107004 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 107063 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 107123 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 107124 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 107183 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 107184 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 107243 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107244 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 107303 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 107304 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 107363 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107364 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 107423 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 107424 gccccgaaaac 107434
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 912 bits (460), Expect = 0.0 Identities = 528/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 872 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 931 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 932 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 991 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 992 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 1051 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1111 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | Sbjct: 1112 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaga 1171 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1172 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1231 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1232 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1291 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 1292 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 1351 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1352 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 1411 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 1412 gccccgaaaac 1422
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 904 bits (456), Expect = 0.0 Identities = 527/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 142104 agttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatg 142045 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 142044 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 141985 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141984 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 141925 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141924 ggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcc 141865 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 141864 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaa 141805 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141804 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 141745 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141744 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 141685 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 141684 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 141625 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141624 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 141565 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 141564 gccccgaaaac 141554 Score = 904 bits (456), Expect = 0.0 Identities = 527/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 111224 agttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatg 111283 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111284 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 111343 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111344 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 111403 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111404 ggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcc 111463 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 111464 cggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaa 111523 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111524 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 111583 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111584 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 111643 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 111644 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 111703 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111704 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 111763 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 111764 gccccgaaaac 111774
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 904 bits (456), Expect = 0.0 Identities = 527/551 (95%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134783 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134724 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134723 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134664 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 134663 cgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacagg 134604 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134603 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 134544 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 134543 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 134484 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 134483 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 134424 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134423 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 134364 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 134363 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 134304 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134303 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 134244 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 134243 gccccgaaaac 134233 Score = 904 bits (456), Expect = 0.0 Identities = 527/551 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106279 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106338 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106339 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106398 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 106399 cgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacagg 106458 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106459 ggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106518 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106519 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106578 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106579 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106638 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106639 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 106698 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct: 106699 taaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtgg 106758 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106759 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106818 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106819 gccccgaaaac 106829
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 902 bits (455), Expect = 0.0 Identities = 526/550 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 772 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 831 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 832 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 891 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 892 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 951 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 ggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1011 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1012 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaa 1071 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1072 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1131 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1191 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||| Sbjct: 1192 taaaaatgcatccgtaggggagcgttccgccttaaagggaagcaaccgcgccagcaaggg 1251 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||| |||||| |||||||||||| ||||||||||||||||| ||| Sbjct: 1252 tggacgaagcggaagcgaaaatgtccgcttgagtaacgcaaacattggtgagaatctaat 1311 Query: 541 gccccgaaaa 550 ||||| |||| Sbjct: 1312 gcccccaaaa 1321
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 900 bits (454), Expect = 0.0 Identities = 459/461 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 399 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 458 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 518 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 578 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 638 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 698 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 758 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 818 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaa 461 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 tcaaaatgcatcggtaggggagcgttccgccttagagggaa 859
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 882 bits (445), Expect = 0.0 Identities = 527/552 (95%), Gaps = 2/552 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatg-ccactcgaacccagnactagctggttctccccgaaat 59 |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2544 agttgtggttaggggtgaaatggccactcgaacccagagctagctggttctccccgaaat 2603 Query: 60 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2604 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggcc 2663 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2664 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgactcaaaa-taacag 2722 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2723 gggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagt 2782 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2783 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 2842 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2843 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcscact 2902 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2903 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggat 2962 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 || ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| | Sbjct: 2963 gtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggtg 3022 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3023 gtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 3082 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 3083 tgccccgaaaac 3094
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 872 bits (440), Expect = 0.0 Identities = 523/551 (94%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131092 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 131033 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 131032 cgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccg 130973 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 130972 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaag 130913 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130912 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 130853 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 130852 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 130793 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130792 gacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 130733 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130732 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 130673 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||| | ||||||||||||||||||||||||||||||||| | ||||| ||| | | Sbjct: 130672 taaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgc 130613 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 130612 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaat 130553 Query: 541 gccccgaaaac 551 ||| ||||||| Sbjct: 130552 gcctcgaaaac 130542 Score = 872 bits (440), Expect = 0.0 Identities = 523/551 (94%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104302 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 104361 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 104362 cgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccg 104421 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 104422 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaag 104481 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 104541 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 104542 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 104601 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 104602 gacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 104661 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 104721 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||| | ||||||||||||||||||||||||||||||||| | ||||| ||| | | Sbjct: 104722 taaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgc 104781 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 104782 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaat 104841 Query: 541 gccccgaaaac 551 ||| ||||||| Sbjct: 104842 gcctcgaaaac 104852
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 872 bits (440), Expect = 0.0 Identities = 523/551 (94%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 129755 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 129696 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 129695 cgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcggtgcgggccg 129636 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct: 129635 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctgaaaataataag 129576 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 129575 ggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcc 129516 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 129515 cagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 129456 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 129455 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 129396 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 129395 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 129336 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||| ||||||||||||||||||||||||||||||||| | ||||| ||| | || Sbjct: 129335 taaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtgg 129276 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 129275 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaat 129216 Query: 541 gccccgaaaac 551 ||| ||||||| Sbjct: 129215 gcctcgaaaac 129205 Score = 872 bits (440), Expect = 0.0 Identities = 523/551 (94%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102701 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 102760 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 102761 cgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcggtgcgggccg 102820 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct: 102821 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctgaaaataataag 102880 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102881 ggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcc 102940 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 102941 cagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 103000 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 103001 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 103060 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103061 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 103120 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||| ||||||||||||||||||||||||||||||||| | ||||| ||| | || Sbjct: 103121 taaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtgg 103180 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 103181 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaat 103240 Query: 541 gccccgaaaac 551 ||| ||||||| Sbjct: 103241 gcctcgaaaac 103251
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 868 bits (438), Expect = 0.0 Identities = 523/551 (94%), Gaps = 8/551 (1%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134209 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134150 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134149 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134090 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct: 134089 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------g 134037 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134036 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 133977 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 133976 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 133917 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 133916 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 133857 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133856 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 133797 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||| ||||||||||||| ||||| ||| || | Sbjct: 133796 taaaaatgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtg 133738 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 133737 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 133678 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 133677 gccccgaaaac 133667 Score = 868 bits (438), Expect = 0.0 Identities = 523/551 (94%), Gaps = 8/551 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106073 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106132 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106133 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106192 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct: 106193 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------g 106245 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106246 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106305 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106306 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106365 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 106366 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 106425 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106426 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 106485 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | ||||||||||||||||||||||||||| ||||||||||||| ||||| ||| || | Sbjct: 106486 taaaaatgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtg 106544 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106545 tggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 106604 Query: 541 gccccgaaaac 551 ||||||||||| Sbjct: 106605 gccccgaaaac 106615
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 850 bits (429), Expect = 0.0 Identities = 522/552 (94%), Gaps = 1/552 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1270 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 1329 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1330 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 1389 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1390 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 1449 Query: 181 ggtcaaggtcggccagtgagacgatggggg-ataagcttcatcgtcgagagggaaacagc 239 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1450 ggtcaaggtcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagc 1509 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1510 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 1569 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1570 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 1629 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1630 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggat 1689 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 || |||| ||||||||||||||||||||| |||| |||||||| | ||| ||| | Sbjct: 1690 gtaaaaaaacatcggtaggggagcgttccgtgttagggggaagcatcggcgcgagccatg 1749 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1750 ccagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 1809 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 1810 tgccccgaaaac 1821
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 835 bits (421), Expect = 0.0 Identities = 521/552 (94%), Gaps = 2/552 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctcccc-gaaat 59 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 791 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaaat 850 Query: 60 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggcc 910 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 911 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataacaa 970 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 gggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 1030 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 || ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1031 cctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcag 1090 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 1091 agacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctcact 1149 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1150 gatcgagcgctcttgcgccgaagatgaacggggctaagtgatctgccgaagctgtgggat 1209 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 || |||| |||||||||||||||||||||| ||||| |||||||| | ||| ||| | | Sbjct: 1210 gtaaaaaggcatcggtaggggagcgttccgtcttagggggaagcacctgcgcgagcagtg 1269 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1270 gtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 1329 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 1330 tgccccgaaaac 1341
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 829 bits (418), Expect = 0.0 Identities = 525/556 (94%), Gaps = 5/556 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 854 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 855 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 914 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 915 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 974 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 ggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1034 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1035 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 1094 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1095 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1154 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1214 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaac--cgcgaaagcggg 478 | |||||||||||||||||||||||||||||||| | |||| || | |||||| ||| Sbjct: 1215 taaaaatgcatcggtaggggagcgttccgccttaaaaggaaacacccgcgcgaacaaggg 1274 Query: 479 ggtcgacgaagcgg-aagcgagaatgtcggcttgagtaacg-aaaaca-ttggtgagaat 535 | | |||||| ||| || | ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1275 gttggacgaaacggaaaccaagaatgtcggcttgagtaacgcaaaacatttggtgagaat 1334 Query: 536 ccaatgccccgaaaac 551 | |||||||||||||| Sbjct: 1335 ctaatgccccgaaaac 1350
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 829 bits (418), Expect = 0.0 Identities = 521/553 (94%), Gaps = 2/553 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 836 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 896 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 897 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataacag 956 Query: 180 ggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | |||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 957 gggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacag 1016 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||| Sbjct: 1017 cccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgca 1076 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1077 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1136 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1137 tgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtggga 1196 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || Sbjct: 1197 tgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcagg 1256 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1257 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1316 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1317 atgccccgaaaac 1329
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 827 bits (417), Expect = 0.0 Identities = 420/421 (99%) Strand = Plus / Minus Query: 131 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 191 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 251 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 311 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 371 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 431 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 490 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 491 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 100 Query: 551 c 551 | Sbjct: 99 c 99
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 813 bits (410), Expect = 0.0 Identities = 522/560 (93%), Gaps = 16/560 (2%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139585 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 139526 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139525 cgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccg 139466 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 139465 cgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa------- 139413 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139412 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 139353 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 139352 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 139293 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 139292 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 139233 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat- 419 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139232 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 139173 Query: 420 ------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 473 || |||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 139172 taaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcga 139113 Query: 474 gc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 531 || | | || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139112 gcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 139053 Query: 532 gaatccaatgccccgaaaac 551 |||||||||||||||||||| Sbjct: 139052 gaatccaatgccccgaaaac 139033 Score = 813 bits (410), Expect = 0.0 Identities = 522/560 (93%), Gaps = 16/560 (2%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110475 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 110534 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110535 cgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccg 110594 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 110595 cgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa------- 110647 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110648 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 110707 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 110708 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 110767 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110768 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 110827 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat- 419 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110828 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 110887 Query: 420 ------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 473 || |||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 110888 taaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcga 110947 Query: 474 gc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 531 || | | || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110948 gcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 111007 Query: 532 gaatccaatgccccgaaaac 551 |||||||||||||||||||| Sbjct: 111008 gaatccaatgccccgaaaac 111027
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 805 bits (406), Expect = 0.0 Identities = 518/553 (93%), Gaps = 2/553 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117372 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 117313 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117312 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 117253 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||||||||||| || |||||| || Sbjct: 117252 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatag 117193 Query: 180 gggtcaa-ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| || |||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 117192 ggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacag 117133 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| ||||||||||||||||||||||||||||||| |||| |||||||||| || ||||| Sbjct: 117132 cccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgca 117073 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 117072 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 117013 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||| Sbjct: 117012 tgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtggga 116953 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || Sbjct: 116952 tgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcagg 116893 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 116892 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 116833 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 116832 atgccccgaaaac 116820 Score = 805 bits (406), Expect = 0.0 Identities = 518/553 (93%), Gaps = 2/553 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90730 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 90789 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90790 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 90849 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||||||||||| || |||||| || Sbjct: 90850 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatag 90909 Query: 180 gggtcaa-ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| || |||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 90910 ggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacag 90969 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| ||||||||||||||||||||||||||||||| |||| |||||||||| || ||||| Sbjct: 90970 cccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgca 91029 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 91030 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 91089 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||| Sbjct: 91090 tgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtggga 91149 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||| || Sbjct: 91150 tgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcgcgagcagg 91209 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 91210 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 91269 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 91270 atgccccgaaaac 91282
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 799 bits (403), Expect = 0.0 Identities = 403/403 (100%) Strand = Plus / Plus Query: 149 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 209 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 269 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 329 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 389 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 449 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 509 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 403
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 789 bits (398), Expect = 0.0 Identities = 516/553 (93%), Gaps = 2/553 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 51911 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 51852 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 51851 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 51792 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacag 179 | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| || Sbjct: 51791 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataatag 51732 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51731 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 51672 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgca 298 ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 51671 ccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgca 51612 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 51611 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttac 51552 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 51551 tgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggga 51492 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| |||| ||||||||||||||||||||||||||||||||||| | || ||| | Sbjct: 51491 tgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagc 51432 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 51431 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 51372 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 51371 atgccccgaaaac 51359 Score = 789 bits (398), Expect = 0.0 Identities = 516/553 (93%), Gaps = 2/553 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 37917 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 37976 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 37977 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 38036 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacag 179 | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| || Sbjct: 38037 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataatag 38096 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38097 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 38156 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgca 298 ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 38157 ccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgca 38216 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 38217 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttac 38276 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 38277 tgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggga 38336 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| |||| ||||||||||||||||||||||||||||||||||| | || ||| | Sbjct: 38337 tgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagc 38396 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 38397 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 38456 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 38457 atgccccgaaaac 38469
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 789 bits (398), Expect = 0.0 Identities = 516/553 (93%), Gaps = 2/553 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 836 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 896 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||||||||||| | |||||| | Sbjct: 897 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacgg 956 Query: 180 gggtcaagg-tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| |||| || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 957 gggataagggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 1016 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||| Sbjct: 1017 cccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgca 1076 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1077 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1136 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1137 tgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtggga 1196 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 |||||||| ||||||||||||||||||||||||||| |||||||| | ||| ||| || Sbjct: 1197 tgtcaaaaaacatcggtaggggagcgttccgccttagggggaagcaccagcgcgagcagg 1256 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1257 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1316 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1317 atgccccgaaaac 1329
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 789 bits (398), Expect = 0.0 Identities = 516/553 (93%), Gaps = 2/553 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4845 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 4904 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 4905 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 4964 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacag 179 | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| || Sbjct: 4965 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataatag 5024 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5025 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 5084 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgca 298 ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 5085 ccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgca 5144 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 5145 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttac 5204 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 5205 tgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggga 5264 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| |||| ||||||||||||||||||||||||||||||||||| | || ||| | Sbjct: 5265 tgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagc 5324 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5325 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 5384 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 5385 atgccccgaaaac 5397
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 777 bits (392), Expect = 0.0 Identities = 517/558 (92%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 774 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 833 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 834 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 893 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactaga-tatgacccaaaaataacag 179 | ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| Sbjct: 894 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctaaaaataacag 953 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 1013 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 || |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| Sbjct: 1014 ccagatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgcag 1073 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||| Sbjct: 1074 agacagccaggaggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttact 1133 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1134 gatcgagcgctcttgcgccgaagattaacggggctaagcgatccgccgaagctgtgggat 1193 Query: 420 g------tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 473 | | ||||| ||||||||||||||||||||||||||||||||||| | || | Sbjct: 1194 gtaaaaataaaaatacatcggtaggggagcgttccgccttagagggaagcctctgcacga 1253 Query: 474 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 533 || | ||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1254 gcagcggtggacgaaacggaagcgagaatgtcggcttgagtaacgcaaacattggtgaga 1313 Query: 534 atccaatgccccgaaaac 551 |||||||||||||||||| Sbjct: 1314 atccaatgccccgaaaac 1331
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 767 bits (387), Expect = 0.0 Identities = 513/552 (92%), Gaps = 5/552 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 87040 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 87099 Query: 61 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 87100 cgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggcc 87159 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||||||| || ||| ||||| || Sbjct: 87160 gcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaag 87215 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||| | |||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 87216 gggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagc 87275 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 || |||||||||||||||||||||||||||||||||||||| ||||| || | |||||| Sbjct: 87276 ccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaa 87335 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 87336 agacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcact 87395 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87396 gatcgagcgctcttgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggat 87455 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 |||||||| |||||||||||||||||||||||| |||| |||||| | ||| ||| || Sbjct: 87456 gtcaaaatacatcggtaggggagcgttccgcctcagagagaagcaccggcgcgagcaggt 87515 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 87516 gtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 87575 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 87576 tgccccgaaaac 87587
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 765 bits (386), Expect = 0.0 Identities = 433/449 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131016 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 130957 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130956 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 130897 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130896 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 130837 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130836 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 130777 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 130776 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 130717 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130716 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 130657 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130656 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 130597 Query: 421 tcaaaatgcatcggtaggggagcgttccg 449 | |||| ||||||||||||||||||||| Sbjct: 130596 taaaaaaacatcggtaggggagcgttccg 130568 Score = 765 bits (386), Expect = 0.0 Identities = 433/449 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102429 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 102488 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 102489 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 102548 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102549 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 102608 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102609 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 102668 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 102669 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 102728 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102729 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 102788 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102789 atcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatg 102848 Query: 421 tcaaaatgcatcggtaggggagcgttccg 449 | |||| ||||||||||||||||||||| Sbjct: 102849 taaaaaaacatcggtaggggagcgttccg 102877 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 130474 cccgaaaac 130466 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 102971 cccgaaaac 102979
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 757 bits (382), Expect = 0.0 Identities = 441/461 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 783 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 842 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 843 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 902 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 903 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 962 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 963 ggttaaggtcggccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcc 1022 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| | Sbjct: 1023 cggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtaggggtgcaca 1082 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 1083 gacagccacgaggtttgcctataagcagccacccttgaaagagtgcgtaatagctcactg 1142 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1143 atcgagcgctcttgcgcccaagatgaacggggctaaacgatctgccgaagctgtgggatg 1202 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaa 461 | |||||||||||||||||||||||||| |||||||||||| Sbjct: 1203 taaaaatgcatcggtaggggagcgttcccccttagagggaa 1243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 507 gcttgagtaacgaaaacattggtgagaatccaatgcccc 545 |||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccc 1326
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 757 bits (382), Expect = 0.0 Identities = 504/545 (92%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 794 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 853 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 854 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 913 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 914 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 973 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct: 974 ggttaaggtcggccagtgagaccatgggggataagcttcatcgtccagagggaaacagcc 1033 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1034 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 1093 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1094 gacagccaagaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1153 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||| ||||| ||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 1154 atccagcgctcttgcgcccaaaatgaacggggctaagcgatctgccgaagctgtgggatg 1213 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 | |||||||||| ||||||||||||||| ||||| |||||| || || | | | ||| Sbjct: 1214 taaaaatgcatccgtaggggagcgttcccccttaaagggaaacaccccccccaacatggg 1273 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | ||| || ||||| | |||||||| || | ||||||| ||||||||||||||||| ||| Sbjct: 1274 tggaccaaacggaaaccagaatgtccgccttagtaacgcaaacattggtgagaatctaat 1333 Query: 541 gcccc 545 ||||| Sbjct: 1334 gcccc 1338
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 755 bits (381), Expect = 0.0 Identities = 443/464 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 781 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 840 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 841 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 900 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 901 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 960 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 961 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcc 1020 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1021 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 1080 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 1081 gacagccaggaggtttgcctaaaagcagccacccttgaaagagtgcgtaatagctcactg 1140 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1141 atcgagcgctcttgcgccgaagatgaacggggctaaacgatctgccgaagctgtgggatg 1200 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagca 464 | |||| ||||||||||||||||||||| |||| |||||||| Sbjct: 1201 taaaaaaacatcggtaggggagcgttccgtgttagggggaagca 1244
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 749 bits (378), Expect = 0.0 Identities = 446/469 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 854 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 855 cgttgaggcgcagcagttgactggacatctaagggtaaagcactgtttcggtgcgggccg 914 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 915 cgagagcggtaccaaatcgaggcaaactctgaatactaaatatgacctcaaaataacagg 974 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 975 ggttaaggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcc 1034 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 1035 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaca 1094 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| |||||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 1095 gacagccaagaggtttgcctaaaagcagccacccttgaaagagtgcgtaataactcactg 1154 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1155 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1214 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgc 469 | |||||||||| ||||||||||||||| ||||| ||||||||| |||| Sbjct: 1215 taaaaatgcatccgtaggggagcgttcccccttatagggaagcacccgc 1263
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 743 bits (375), Expect = 0.0 Identities = 447/470 (95%), Gaps = 1/470 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 816 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 875 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 876 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 935 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 995 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| | Sbjct: 996 cggatcaccagctaaggcccctaaatgaccgcccagtgataaaggaggtaggggtgcaga 1055 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1056 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1115 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 1175 Query: 421 tcaaaatgcatcggta-ggggagcgttccgccttagagggaagcaaccgc 469 | |||| |||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 1176 taaaaaaacatccgtatgggaagcgttccgtgttagggggaagcatccgc 1225
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 741 bits (374), Expect = 0.0 Identities = 515/558 (92%), Gaps = 7/558 (1%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 145782 agttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatg 145723 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 145722 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 145663 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--caaa---aat 174 ||| |||||||||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 145662 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaag 145603 Query: 175 aacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 233 |||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 145602 aacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagagggg 145543 Query: 234 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggg 293 |||||||| |||||||||||||||||||||||||||||||||||| | |||||||| || Sbjct: 145542 aacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtagga 145483 Query: 294 gtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatag 353 ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 145482 gtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatag 145423 Query: 354 ctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctg 413 |||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 145422 ctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctg 145363 Query: 414 tgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 473 ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 145362 tgggatgtcaaaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcga 145303 Query: 474 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 533 || || || ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145302 gcaggtgtggacaaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgaga 145243 Query: 534 atccaatgccccgaaaac 551 |||||||||||||||||| Sbjct: 145242 atccaatgccccgaaaac 145225 Score = 741 bits (374), Expect = 0.0 Identities = 515/558 (92%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 112680 agttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatg 112739 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112740 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 112799 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--caaa---aat 174 ||| |||||||||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 112800 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaag 112859 Query: 175 aacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggga 233 |||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 112860 aacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagagggg 112919 Query: 234 aacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggg 293 |||||||| |||||||||||||||||||||||||||||||||||| | |||||||| || Sbjct: 112920 aacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtagga 112979 Query: 294 gtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatag 353 ||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 112980 gtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatag 113039 Query: 354 ctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctg 413 |||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 113040 ctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctg 113099 Query: 414 tgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaa 473 ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| | Sbjct: 113100 tgggatgtcaaaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcga 113159 Query: 474 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 533 || || || ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 113160 gcaggtgtggacaaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgaga 113219 Query: 534 atccaatgccccgaaaac 551 |||||||||||||||||| Sbjct: 113220 atccaatgccccgaaaac 113237
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 733 bits (370), Expect = 0.0 Identities = 509/552 (92%), Gaps = 4/552 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 89126 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 89185 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 89186 cgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggcc 89245 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 || |||||||||||||||||||||||||||||||||||||| |||| || | || | Sbjct: 89246 acgagagcggtaccaaatcgaggcaaactctgaatactagatt--accccaataaaag-g 89302 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 |||| | |||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 89303 gggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagc 89362 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 || |||||||||||||||||||||||||||||||||||||| ||||| || | |||||| Sbjct: 89363 ccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaa 89422 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 89423 agacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcact 89482 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 89483 gatcgagcgctcgtgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggat 89542 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 || ||||| |||||||||||||||||||||||| ||||||||||| | ||| ||| || Sbjct: 89543 gtaaaaatacatcggtaggggagcgttccgcctcagagggaagcaccggcgcgagcaggt 89602 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 89603 gtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 89662 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 89663 tgccccgaaaac 89674
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 720 bits (363), Expect = 0.0 Identities = 368/370 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 580 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 639 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 699 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 759 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 819 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 879 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 939 Query: 361 atcgagcgcc 370 |||||||||| Sbjct: 940 atcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 716 bits (361), Expect = 0.0 Identities = 390/400 (97%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122431 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 122372 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122371 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 122312 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122311 cgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataatagg 122252 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122251 attcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 122192 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 122191 tggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaa 122132 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122131 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcacta 122072 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcga 400 |||||||||||||||||||||||||||||||||||||||| Sbjct: 122071 atcgagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 716 bits (361), Expect = 0.0 Identities = 390/400 (97%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 12824972 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 12824913 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824912 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 12824853 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12824852 cgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataatagg 12824793 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824792 attcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 12824733 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12824732 tggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaa 12824673 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824672 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcacta 12824613 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcga 400 |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824612 atcgagcgcccttgcgctgaagatgaacggggctaagcga 12824573
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 710 bits (358), Expect = 0.0 Identities = 506/553 (91%), Gaps = 2/553 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 781 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 840 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 841 cgttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggct 900 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| |||||||||||||||||||||||||||||||||| |||| ||| | ||||| || Sbjct: 901 gcgagagcggtaccaaatcgaggcaaactctgaatactggataggactccctaataatag 960 Query: 180 gg-gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 | || | |||| |||||||||| ||||||||||||||||| |||||||||| ||||| Sbjct: 961 agagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacag 1020 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| ||||||| ||||||||||||||||||||||| |||| |||||||||| || ||||| Sbjct: 1021 cccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgca 1080 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1081 aagacagccaggaggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcac 1140 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||| Sbjct: 1141 tgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtggga 1200 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||||||||| ||||||||||||||||||||||||||| | |||||| | ||| ||| || Sbjct: 1201 tgtcaaaatacatcggtaggggagcgttccgccttagggagaagcaccagcgtgagcagg 1260 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1261 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1320 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1321 atgccccgaaaac 1333
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 708 bits (357), Expect = 0.0 Identities = 439/467 (94%), Gaps = 6/467 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 854 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 855 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 914 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||| ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 915 cgagagcagtaccaaatcgaggcaaactctgaatactagatatgacc------tcacagg 968 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||||| Sbjct: 969 ggttaaggtcggccaatgagacgatgggggataagcttcatcttccagagggaaacagcc 1028 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1029 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaa 1088 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1089 gacagccacgaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 1148 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| || |||||||||||||| ||||||||||||||||||||||| Sbjct: 1149 atcgagcgctcttgcgcccaaaatgaacggggctaaacgatctgccgaagctgtgggatg 1208 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaacc 467 | ||||||||||||||||||||||||||||| || |||||| ||||| Sbjct: 1209 taaaaatgcatcggtaggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 520 aaacattggtgagaatccaatgccccgaaaa 550 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 694 bits (350), Expect = 0.0 Identities = 420/441 (95%), Gaps = 2/441 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 177618 agttgtggttaggggtgaaatgccactcgcacccagagctagctggttctccccgaaatg 177677 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 177678 cgttgaggcgcagcagttgactggacatctaggggtaaagcacggtttcggtgcgggccg 177737 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 177738 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataagagg 177797 Query: 181 ggt-caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 || |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 177798 ggggcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaagagc 177857 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177858 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 177917 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 177918 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 177977 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat-ctgccgaagctgtggga 418 |||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 177978 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatcctgccgaagctgtggga 178037 Query: 419 tgtcaaaatgcatcggtaggg 439 ||||||||| |||||| |||| Sbjct: 178038 tgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 255 aggcccctaaatgaccgctcag 276 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gtcgagagggaaacagcccggatc 246 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 gtcgagagggaaacagcccggatc 246 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Minus Query: 204 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 264 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 324 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 384 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 444 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 504 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 63542
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 690 bits (348), Expect = 0.0 Identities = 442/470 (94%), Gaps = 5/470 (1%) Strand = Plus / Plus Query: 82 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 141 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 142 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 201 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 202 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 262 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 321 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 322 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 381 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 382 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 441 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 442 gcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaa 501 |||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||| Sbjct: 676 gcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaa 735 Query: 502 tgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| | ||||| | |||||||||||||||||||||||||||||||| Sbjct: 736 tgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaac 781 Score = 113 bits (57), Expect = 6e-22 Identities = 62/64 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 235 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 294 Query: 61 cgtt 64 |||| Sbjct: 295 cgtt 298
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 680 bits (343), Expect = 0.0 Identities = 343/343 (100%) Strand = Plus / Plus Query: 209 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 269 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 329 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 389 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 449 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 509 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 343
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 672 bits (339), Expect = 0.0 Identities = 399/420 (95%), Gaps = 7/420 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 260 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 319 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 320 cgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccg 379 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 380 cgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa------- 432 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 492 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 493 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 552 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 553 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 612 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 668 bits (337), Expect = 0.0 Identities = 499/552 (90%), Gaps = 1/552 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 127664 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 127605 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 127604 cgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggct 127545 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| ||||||||||||||||||||||||||||||||||| |||||||| || ||| | Sbjct: 127544 gcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacgg 127485 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 || | |||| ||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 127484 ggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagc 127425 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 || ||||||||||||||||||||||||||| |||||||| |||||||||| || |||||| Sbjct: 127424 ccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaa 127365 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 127364 agacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcact 127305 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||| Sbjct: 127304 gatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagat 127245 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 |||||| ||||||||||||||||||||| | ||| |||||| ||| ||| || Sbjct: 127244 gtcaaaggacatcggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggt 127185 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 127184 gtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 127125 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 127124 tgccccgaaaac 127113 Score = 668 bits (337), Expect = 0.0 Identities = 499/552 (90%), Gaps = 1/552 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95783 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 95842 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct: 95843 cgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggct 95902 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 179 ||| ||||||||||||||||||||||||||||||||||| |||||||| || ||| | Sbjct: 95903 gcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacgg 95962 Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 239 || | |||| ||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 95963 ggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagc 96022 Query: 240 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 299 || ||||||||||||||||||||||||||| |||||||| |||||||||| || |||||| Sbjct: 96023 ccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaa 96082 Query: 300 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 359 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 96083 agacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcact 96142 Query: 360 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||| Sbjct: 96143 gatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagat 96202 Query: 420 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggg 479 |||||| ||||||||||||||||||||| | ||| |||||| ||| ||| || Sbjct: 96203 gtcaaaggacatcggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggt 96262 Query: 480 gtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaa 539 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 96263 gtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaa 96322 Query: 540 tgccccgaaaac 551 |||||||||||| Sbjct: 96323 tgccccgaaaac 96334
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 642 bits (324), Expect = 0.0 Identities = 375/392 (95%) Strand = Plus / Minus Query: 160 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 219 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 220 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 279 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 280 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 339 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 340 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 460 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 519 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 520 aaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaac 249
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 636 bits (321), Expect = e-179 Identities = 384/406 (94%), Gaps = 7/406 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 276 agttgtggttaggggtgaaatgccgctcgaacccagagctagctggttctccccgaaatg 335 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 336 cgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccg 395 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 396 cgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa------- 448 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 508 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 509 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 568 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 569 gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 628 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 406 ||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 629 atcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 609 bits (307), Expect = e-171 Identities = 490/550 (89%), Gaps = 1/550 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||| |||| || ||||||||||||||| |||||| Sbjct: 3045 agttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccctgaaatg 2987 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2986 cattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgcgggcaa 2927 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| ||| | Sbjct: 2926 tgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaatcacaag 2867 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| || Sbjct: 2866 ggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaaacaacc 2807 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 300 |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 2806 tggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaa 2747 Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 ||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||| Sbjct: 2746 gacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagctcacta 2687 Query: 361 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 420 ||||||||| ||||| | |||||||| ||||||||||||||| |||||| ||||||| Sbjct: 2686 atcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctatgggatg 2627 Query: 421 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 480 ||||||||||||| |||||||||||||||||||||||||||||| | || || | || Sbjct: 2626 tcaaaatgcatcgataggggagcgttccgccttagagggaagcacctgcacgagtagtgg 2567 Query: 481 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 540 | || || ||||||||| |||||||||||| ||| | ||||||||||||||||||||| Sbjct: 2566 tggaagaggcggaagcgggaatgtcggcttttttaaggcaaacattggtgagaatccaat 2507 Query: 541 gccccgaaaa 550 |||| ||||| Sbjct: 2506 gccctgaaaa 2497
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 571 bits (288), Expect = e-160 Identities = 491/555 (88%), Gaps = 8/555 (1%) Strand = Plus / Minus Query: 5 gtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgtt 64 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 138487 gtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgtt 138428 Query: 65 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 123 |||||||||| ||||||| | | | || | |||||||||||||| |||||||||||||| Sbjct: 138427 gaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcga 138368 Query: 124 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--g 181 |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| | | Sbjct: 138367 gagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagg 138308 Query: 182 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 241 || ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| Sbjct: 138307 gtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagccc 138248 Query: 242 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 301 |||||||||||||||||||| ||||||||||||||| | |||||||| || |||||||| Sbjct: 138247 agatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaag 138188 Query: 302 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga 361 |||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||| Sbjct: 138187 acagccgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactga 138128 Query: 362 tcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 421 || ||||| | ||||| || |||||||||| ||||||| ||||||||||||||||||||| Sbjct: 138127 tcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgt 138068 Query: 422 c--aaaatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcg 476 | | ||| |||||||||||||||||||||||| |||||||||| | ||| ||| Sbjct: 138067 cgaacaatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagca 138008 Query: 477 ggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatc 536 || | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 138007 ggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatc 137948 Query: 537 caatgccccgaaaac 551 ||||||||||||||| Sbjct: 137947 caatgccccgaaaac 137933 Score = 571 bits (288), Expect = e-160 Identities = 491/555 (88%), Gaps = 8/555 (1%) Strand = Plus / Plus Query: 5 gtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgtt 64 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 83390 gtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgtt 83449 Query: 65 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 123 |||||||||| ||||||| | | | || | |||||||||||||| |||||||||||||| Sbjct: 83450 gaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcga 83509 Query: 124 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--g 181 |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| | | Sbjct: 83510 gagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagg 83569 Query: 182 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 241 || ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| Sbjct: 83570 gtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagccc 83629 Query: 242 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 301 |||||||||||||||||||| ||||||||||||||| | |||||||| || |||||||| Sbjct: 83630 agatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaag 83689 Query: 302 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga 361 |||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||| Sbjct: 83690 acagccgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactga 83749 Query: 362 tcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 421 || ||||| | ||||| || |||||||||| ||||||| ||||||||||||||||||||| Sbjct: 83750 tcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgt 83809 Query: 422 c--aaaatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcg 476 | | ||| |||||||||||||||||||||||| |||||||||| | ||| ||| Sbjct: 83810 cgaacaatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagca 83869 Query: 477 ggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatc 536 || | |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 83870 ggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatc 83929 Query: 537 caatgccccgaaaac 551 ||||||||||||||| Sbjct: 83930 caatgccccgaaaac 83944
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 565 bits (285), Expect = e-158 Identities = 352/373 (94%), Gaps = 1/373 (0%) Strand = Plus / Plus Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 238 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 5805 atgccccgaaaac 5817 Score = 280 bits (141), Expect = 5e-72 Identities = 161/168 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 5273 agttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatg 5332 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 5333 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccg 5392 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 168 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5393 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 565 bits (285), Expect = e-158 Identities = 352/373 (94%), Gaps = 1/373 (0%) Strand = Plus / Plus Query: 180 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 238 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 5805 atgccccgaaaac 5817 Score = 280 bits (141), Expect = 5e-72 Identities = 161/168 (95%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 5273 agttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatg 5332 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 5333 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccg 5392 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 168 || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5393 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 563 bits (284), Expect = e-157 Identities = 292/295 (98%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 690 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 749 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 809 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 869 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 929 Query: 241 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 295 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 930 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 555 bits (280), Expect = e-155 Identities = 343/364 (94%) Strand = Plus / Plus Query: 188 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 248 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 307 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 308 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 367 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 368 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 427 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 428 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 487 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 488 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 547 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 548 aaac 551 |||| Sbjct: 5542 aaac 5545 Score = 278 bits (140), Expect = 2e-71 Identities = 157/163 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5005 agttgtggttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 5064 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 5065 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccg 5124 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatat 163 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 5125 cgagagcggtaccaaatcgaggcaaactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 555 bits (280), Expect = e-155 Identities = 343/364 (94%) Strand = Plus / Minus Query: 188 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 248 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 307 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 308 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 367 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 368 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 427 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 428 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 487 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 488 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 547 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 548 aaac 551 |||| Sbjct: 22383 aaac 22380 Score = 278 bits (140), Expect = 2e-71 Identities = 157/163 (96%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 22920 agttgtggttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 22861 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 22860 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccg 22801 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatat 163 || |||||||||||||||||||||||||||||||||||||||| Sbjct: 22800 cgagagcggtaccaaatcgaggcaaactctgaatactagatat 22758
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 539 bits (272), Expect = e-150 Identities = 272/272 (100%) Strand = Plus / Plus Query: 280 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 340 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 460 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 520 aaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaac 272
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 529 bits (267), Expect = e-147 Identities = 272/274 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 575 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 634 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 694 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 754 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 814 Query: 241 cggatcaccagctaaggcccctaaatgaccgctc 274 |||||||||||||||||||||||||||||||||| Sbjct: 815 cggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 547 aaaac 551 ||||| Sbjct: 5218 aaaac 5222 Score = 281 bits (142), Expect = 1e-72 Identities = 160/165 (96%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4666 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 4725 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4726 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 4785 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4786 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 547 aaaac 551 ||||| Sbjct: 1328 aaaac 1332 Score = 281 bits (142), Expect = 1e-72 Identities = 160/165 (96%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 776 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 835 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 836 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 895 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 896 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Minus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 547 aaaac 551 ||||| Sbjct: 149917 aaaac 149913 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 547 aaaac 551 ||||| Sbjct: 118749 aaaac 118753 Score = 281 bits (142), Expect = 1e-72 Identities = 160/165 (96%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 150469 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 150410 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 150409 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 150350 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150349 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 281 bits (142), Expect = 1e-72 Identities = 160/165 (96%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118197 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 118256 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 118257 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 118316 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118317 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 547 aaaac 551 ||||| Sbjct: 1328 aaaac 1332 Score = 281 bits (142), Expect = 1e-72 Identities = 160/165 (96%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 776 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 835 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 836 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 895 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 896 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 509 bits (257), Expect = e-141 Identities = 321/341 (94%), Gaps = 1/341 (0%) Strand = Plus / Plus Query: 211 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 271 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 330 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 331 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 390 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 391 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 450 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 451 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 510 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 511 gagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaac 596
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 502 bits (253), Expect = e-139 Identities = 258/260 (99%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 783 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 842 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 902 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 962 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1022 Query: 241 cggatcaccagctaaggccc 260 |||||||||||||||||||| Sbjct: 1023 cggatcaccagctaaggccc 1042
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 498 bits (251), Expect = e-137 Identities = 332/359 (92%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 145257 Score = 498 bits (251), Expect = e-137 Identities = 332/359 (92%) Strand = Plus / Minus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 87594 Score = 260 bits (131), Expect = 4e-66 Identities = 155/162 (95%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 144699 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 144758 Query: 61 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| Sbjct: 144759 cgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggct 144818 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagat 161 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144819 gcgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 260 bits (131), Expect = 4e-66 Identities = 155/162 (95%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 88152 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 88093 Query: 61 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||| Sbjct: 88092 cgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggct 88033 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagat 161 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88032 gcgagagcggtaccaaatcgaggcaaactctgaatactagat 87991
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 498 bits (251), Expect = e-137 Identities = 406/456 (89%), Gaps = 9/456 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||| Sbjct: 780 agttgtggttaggggtgaaatgccaatcaaacccaaagctagttggttctccccgaaatg 839 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| |||||||| |||| || ||||||||||||||||||||||||||||| |||| | Sbjct: 840 cgtttaggcgcagaagtt-accagacatctaggggtaaagcactgtttcggttcgggtcg 898 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--caaaaataaca 178 || |||| ||||||||| |||||||||| |||||||||||||||||| ||||||||||| Sbjct: 899 cgagagccgtaccaaattgaggcaaactatgaatactagatatgacctccaaaaataaca 958 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 959 gggataaaggtggaccagtgagaccatgggggataagcttcatcgtcgagaggggaacag 1018 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| Sbjct: 1019 cccagatcaccagctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgca 1078 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 1079 tagacaaccaggaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaac 1138 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 ||||||||||| ||||||| ||| ||||| ||| ||||||| | ||||||||||||||| Sbjct: 1139 tgatcgagcgctcttgcgccgaatatgaatgggaataagcgacccgccgaagctgtggga 1198 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgcctta 454 ||| | |||||||||||||||||| |||||| Sbjct: 1199 tgtaa------atcggtaggggagcgttctgcctta 1228 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 486 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 545 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 546 gaaaac 551 |||||| Sbjct: 1330 gaaaac 1335
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 498 bits (251), Expect = e-137 Identities = 332/359 (92%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1313 Score = 262 bits (132), Expect = 1e-66 Identities = 156/163 (95%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 763 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 822 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 823 cgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggcc 882 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagata 162 ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 883 gcgagagcggtaccaaatcgaggcaaactctgaatactggata 925
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 494 bits (249), Expect = e-136 Identities = 337/365 (92%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 547 aaaac 551 ||||| Sbjct: 114887 aaaac 114883 Score = 494 bits (249), Expect = e-136 Identities = 337/365 (92%), Gaps = 1/365 (0%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 547 aaaac 551 ||||| Sbjct: 87233 aaaac 87237 Score = 280 bits (141), Expect = 5e-72 Identities = 156/160 (97%), Gaps = 1/160 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115434 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 115375 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 115374 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 115315 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 115314 gcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 280 bits (141), Expect = 5e-72 Identities = 156/160 (97%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 86686 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 86745 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 86746 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 86805 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 86806 gcgagagcggtaccaaatcgaggcaaactctgaatactag 86845
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 480 bits (242), Expect = e-132 Identities = 245/246 (99%) Strand = Plus / Minus Query: 306 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 366 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 426 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 486 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 545 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 546 gaaaac 551 |||||| Sbjct: 20630 gaaaac 20625
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 755 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 814 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 815 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 873 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 874 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 933 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 934 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 993 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 994 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1053 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1054 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1113 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1114 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1173 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1174 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1228 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1229 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1288 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1289 atgccccgaaaac 1301
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 755 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 814 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 815 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 873 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 874 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 933 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 934 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 993 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 994 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1053 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1054 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1113 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1114 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1173 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1174 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1228 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1229 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1288 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1289 atgccccgaaaac 1301
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 474 bits (239), Expect = e-130 Identities = 476/553 (86%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaaggagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 466 bits (235), Expect = e-128 Identities = 475/553 (85%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| |||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaggccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 466 bits (235), Expect = e-128 Identities = 475/553 (85%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| | ||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagcttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 466 bits (235), Expect = e-128 Identities = 476/553 (86%), Gaps = 9/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagc-gtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 873 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 874 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 933 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 934 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 993 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 994 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1053 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1054 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1113 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1114 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1173 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1174 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1228 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1229 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1288 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1289 atgccccgaaaac 1301
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 458 bits (231), Expect = e-126 Identities = 474/553 (85%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| || ||| || ||| ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagtcgtt-accagacctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| ||||| ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| || | |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaggtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 454 bits (229), Expect = e-124 Identities = 331/365 (90%) Strand = Plus / Minus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 426 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 427 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 486 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 547 aaaac 551 ||||| Sbjct: 5242 aaaac 5238 Score = 210 bits (106), Expect = 4e-51 Identities = 151/165 (91%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5771 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 5712 Query: 61 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| Sbjct: 5711 cgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggcc 5652 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5651 gtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 450 bits (227), Expect = e-123 Identities = 473/553 (85%), Gaps = 8/553 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||| || ||||||||| |||||||||||||||||||||| Sbjct: 756 agttgtggttaggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatg 815 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||||| ||| || | | || ||||||||||||||||| ||||||||| || | Sbjct: 816 cgtttaggcggagccgtatccag-acctctaggggtaaagcactatttcggtgcaggtcg 874 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaaaaataaca 178 || |||||||||||||| |||||||||| |||||| |||||||||| |||||||||||| Sbjct: 875 cgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaaaaataaca 934 Query: 179 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 238 ||| | ||||| | |||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct: 935 gggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaa 994 Query: 239 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 298 ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 995 cccagatcactagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Query: 299 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 358 | ||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||| || Sbjct: 1055 taaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaac 1114 Query: 359 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||||| || |||| || ||| ||||||||| || || ||| ||||||| |||||| Sbjct: 1115 tgatcgagtgctcttgtgccgaatatgaacgggaataggcaatccaccgaagccgtggga 1174 Query: 419 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 478 ||| | |||||| |||||||||||| |||||| | ||||||| | || || | Sbjct: 1175 tgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgcccgagaagt 1229 Query: 479 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 538 ||| || ||||| |||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1230 ggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1289 Query: 539 atgccccgaaaac 551 ||||||||||||| Sbjct: 1290 atgccccgaaaac 1302
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 450 bits (227), Expect = e-123 Identities = 329/362 (90%), Gaps = 2/362 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 429 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 430 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 489 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 550 ac 551 || Sbjct: 1313 ac 1314 Score = 178 bits (90), Expect = 1e-41 Identities = 141/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| |||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 780 tgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 64 tgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||||||||||||||||||||||||||||||||| Sbjct: 900 aaagcggtaccaaatcgaggcaaactctgaatactag 936
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 446 bits (225), Expect = e-122 Identities = 328/362 (90%), Gaps = 4/362 (1%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 429 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 430 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 489 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 550 ac 551 || Sbjct: 1272 ac 1273 Score = 212 bits (107), Expect = 9e-52 Identities = 149/162 (91%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 735 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 794 Query: 64 tgaggcgcagcagttgactggacatct-aggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| |||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 795 tgaggcgcagcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcg 854 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 855 aaagcggtaccaaatcgaggcaaactctgaatactaggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 444 bits (224), Expect = e-121 Identities = 332/367 (90%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 424 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 425 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 484 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 485 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 544 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 545 cgaaaac 551 ||||||| Sbjct: 1306 cgaaaac 1312 Score = 226 bits (114), Expect = 6e-56 Identities = 147/157 (93%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 779 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 838 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 839 tgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 898 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||||||||||||||||||||||||||||||||| Sbjct: 899 aaagcggtaccaaatcgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 444 bits (224), Expect = e-121 Identities = 332/367 (90%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 424 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 425 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 484 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 485 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 544 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 545 cgaaaac 551 ||||||| Sbjct: 1319 cgaaaac 1325 Score = 226 bits (114), Expect = 6e-56 Identities = 147/157 (93%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 792 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 851 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 852 tgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 911 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||||||||||||||||||||||||||||||||| Sbjct: 912 aaagcggtaccaaatcgaggcaaactctgaatactag 948
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 440 bits (222), Expect = e-120 Identities = 266/278 (95%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 274 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 333 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 334 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 393 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 394 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 453 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-ctt 178 Query: 454 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 513 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 514 taacgaaaacattggtgagaatccaatgccccgaaaac 551 ||||| |||||||||||||||||||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaac 276
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 436 bits (220), Expect = e-119 Identities = 331/367 (90%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 187 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 246 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 247 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 306 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 307 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 366 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 367 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 424 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 425 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 484 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 485 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 544 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 545 cgaaaac 551 ||||||| Sbjct: 1423 cgaaaac 1429 Score = 226 bits (114), Expect = 6e-56 Identities = 147/157 (93%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 896 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 955 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 956 tgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 1015 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||||||||||||||||||||||||||||||||| Sbjct: 1016 aaagcggtaccaaatcgaggcaaactctgaatactag 1052
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 434 bits (219), Expect = e-118 Identities = 327/362 (90%), Gaps = 2/362 (0%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 429 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 430 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 489 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 550 ac 551 || Sbjct: 123952 ac 123951 Score = 434 bits (219), Expect = e-118 Identities = 327/362 (90%), Gaps = 2/362 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 429 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 430 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 489 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 550 ac 551 || Sbjct: 95914 ac 95915 Score = 170 bits (86), Expect = 3e-39 Identities = 140/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| |||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 124485 tgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 124426 Query: 64 tgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||||| Sbjct: 124425 tgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcg 124366 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||||||||||||||| ||||||||||||||||| Sbjct: 124365 aaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 170 bits (86), Expect = 3e-39 Identities = 140/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| |||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 95381 tgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 95440 Query: 64 tgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||| | ||| | | ||||||||||||||||||||||||||||||||| Sbjct: 95441 tgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcg 95500 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||||||||||||||| ||||||||||||||||| Sbjct: 95501 aaagcggtaccaaatcgagtcaaactctgaatactag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 430 bits (217), Expect = e-117 Identities = 325/361 (90%), Gaps = 5/361 (1%) Strand = Plus / Plus Query: 191 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 250 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 251 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 310 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 311 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 370 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 371 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 430 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 431 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 490 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 491 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 550 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 551 c 551 | Sbjct: 1355 c 1355 Score = 212 bits (107), Expect = 9e-52 Identities = 152/166 (91%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 793 agttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttctccccgaaatg 852 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 853 cgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcggtgcgggtct 911 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 166 || |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 912 cgagagcggtaccaaattgaggcaaactatgaatactagatatgac 957
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 428 bits (216), Expect = e-117 Identities = 216/216 (100%) Strand = Plus / Plus Query: 336 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 396 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 456 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 516 acgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaac 216
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 414 bits (209), Expect = e-112 Identities = 320/357 (89%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 5361 Score = 190 bits (96), Expect = 3e-45 Identities = 141/155 (90%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 4829 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 4888 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| || Sbjct: 4889 tgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacg 4948 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatact 157 || |||||||||||||||||||||||||||||| Sbjct: 4949 aaagtggtaccaaatcgaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 414 bits (209), Expect = e-112 Identities = 320/357 (89%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1328 Score = 190 bits (96), Expect = 3e-45 Identities = 141/155 (90%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 796 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 855 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| || Sbjct: 856 tgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacg 915 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatact 157 || |||||||||||||||||||||||||||||| Sbjct: 916 aaagtggtaccaaatcgaggcaaactctgaatact 950
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 410 bits (207), Expect = e-111 Identities = 207/207 (100%) Strand = Plus / Plus Query: 345 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 405 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 465 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 525 ttggtgagaatccaatgccccgaaaac 551 ||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaac 207
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaac 1323 Score = 208 bits (105), Expect = 1e-50 Identities = 147/160 (91%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 791 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 850 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 |||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 851 tgaggcgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgcg 910 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactagata 162 ||||||||||||||||| ||||||||||||||| |||| Sbjct: 911 aaagcggtaccaaatcgagacaaactctgaatactggata 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1328 Score = 190 bits (96), Expect = 3e-45 Identities = 141/155 (90%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 796 tgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 855 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 |||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| || Sbjct: 856 tgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggctacg 915 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatact 157 || |||||||||||||||||||||||||||||| Sbjct: 916 aaagtggtaccaaatcgaggcaaactctgaatact 950
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 404 bits (204), Expect = e-109 Identities = 224/231 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 364958 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 365017 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 365018 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 365077 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 365078 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacagg 365137 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 231 ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 365138 ggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 226 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 285 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 286 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 344 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 345 gcgtaatagctcactg 360 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 301 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 gtcgagagggaaacagcccggatc 246 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 398 bits (201), Expect = e-108 Identities = 323/363 (88%), Gaps = 3/363 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 428 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 429 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 488 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 489 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 548 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 549 aac 551 ||| Sbjct: 1275 aac 1277 Score = 190 bits (96), Expect = 3e-45 Identities = 147/163 (90%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||| ||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 742 tgtggataggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 801 Query: 64 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| ||||||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 802 tgaggcgcagcggttgactagactatttaggggtaaagcactgtttcggtgcgggctgtg 861 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactagatatga 165 | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 862 aaaacggtaccaaattgatgcaaactctgaatactaaatatga 904
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 379 bits (191), Expect = e-102 Identities = 196/198 (98%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 198 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 139 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 79 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 19 Query: 181 ggtcaaggtcggccagtg 198 |||||||||||||||||| Sbjct: 18 ggtcaaggtcggccagtg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 379 bits (191), Expect = e-102 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 47032 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 47091 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 47092 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 47151 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 180 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 47152 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 47211 Query: 181 ggtcaaggtcggccagtgagacgatgggggataagctt 218 |||||||||||||||||||||||||||||||||||||| Sbjct: 47212 ggtcaaggtcggccagtgagacgatgggggataagctt 47249
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 361 bits (182), Expect = 2e-96 Identities = 318/363 (87%), Gaps = 4/363 (1%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 428 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 429 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 488 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 489 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 548 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 549 aac 551 ||| Sbjct: 1312 aac 1314 Score = 198 bits (100), Expect = 1e-47 Identities = 147/162 (90%), Gaps = 2/162 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 775 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 834 Query: 61 cgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggc 118 |||||||||||||| |||| | || ||||||||||||||||||||||||||||||| Sbjct: 835 cgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggc 894 Query: 119 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 895 tgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 361 bits (182), Expect = 2e-96 Identities = 318/363 (87%), Gaps = 4/363 (1%) Strand = Plus / Minus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 428 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 429 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 488 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 489 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 548 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 549 aac 551 ||| Sbjct: 114350 aac 114348 Score = 361 bits (182), Expect = 2e-96 Identities = 318/363 (87%), Gaps = 4/363 (1%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 428 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 429 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 488 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 489 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 548 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 549 aac 551 ||| Sbjct: 87638 aac 87640 Score = 198 bits (100), Expect = 1e-47 Identities = 147/162 (90%), Gaps = 2/162 (1%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 114887 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 114828 Query: 61 cgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggc 118 |||||||||||||| |||| | || ||||||||||||||||||||||||||||||| Sbjct: 114827 cgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggc 114768 Query: 119 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114767 tgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 198 bits (100), Expect = 1e-47 Identities = 147/162 (90%), Gaps = 2/162 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 87101 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 87160 Query: 61 cgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggc 118 |||||||||||||| |||| | || ||||||||||||||||||||||||||||||| Sbjct: 87161 cgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggc 87220 Query: 119 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87221 tgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 157 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 216 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 217 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 276 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 277 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 336 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 337 taaagagtgcgtaatagctca 357 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 157 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 216 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 217 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 276 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 277 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 336 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 337 taaagagtgcgtaatagctca 357 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 213 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 272 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 273 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 332 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 333 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 393 ctaagcgatctgccgaagctgtgggatgtcaaaat 427 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 213 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 272 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 273 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 332 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 333 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 393 ctaagcgatctgccgaagctgtgggatgtcaaaat 427 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 349 bits (176), Expect = 6e-93 Identities = 314/360 (87%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 431 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Score = 210 bits (106), Expect = 4e-51 Identities = 151/165 (91%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct: 3811 agttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 3870 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||| Sbjct: 3871 cgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggct 3930 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3931 gcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 345 bits (174), Expect = 9e-92 Identities = 198/206 (96%) Strand = Plus / Plus Query: 346 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 405 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 406 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 465 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 466 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 525 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 526 tggtgagaatccaatgccccgaaaac 551 |||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaac 960
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 341 bits (172), Expect = 1e-90 Identities = 314/360 (87%), Gaps = 1/360 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 431 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Score = 210 bits (106), Expect = 4e-51 Identities = 151/165 (91%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 836 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggct 896 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 897 gcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 339 bits (171), Expect = 6e-90 Identities = 312/359 (86%), Gaps = 5/359 (1%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 2858 Score = 163 bits (82), Expect = 7e-37 Identities = 138/157 (87%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||| ||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 2334 agttgtgattaggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatg 2393 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||| ||| | | | | ||||||||||||||||||||||||||||| Sbjct: 2394 cgttgaggcgcagcggttaaatttaagcttgggggtaaagcactgtttcggtgcgggctg 2453 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatact 157 || |||||||||||||||| |||||||||||||||| Sbjct: 2454 cgaaagcggtaccaaatcgatgcaaactctgaatact 2490
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 4e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 220 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 279 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 280 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 339 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 340 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 399 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 400 atctgccgaagctgtgggat 419 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 333 bits (168), Expect = 4e-88 Identities = 312/360 (86%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 431 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Score = 210 bits (106), Expect = 4e-51 Identities = 151/165 (91%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 836 Query: 61 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggct 896 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 164 ||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 897 gcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 206 bits (104), Expect = 6e-50 Identities = 149/163 (91%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 1183 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 1242 Query: 64 tgaggcgcagcagttgactggaca-tctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| |||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 1243 tgaggcgcagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcg 1302 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatactagatatga 165 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1303 aaagcggtaccaaatcgaggcaaactctgaatactagacatga 1345 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 430 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 489 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 550 ac 551 || Sbjct: 1721 ac 1722
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 293 bits (148), Expect = 3e-76 Identities = 309/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 373 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 431 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 151 gaatact 157 ||||||| Sbjct: 917 gaatact 923 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||| Sbjct: 768 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgt 827 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 828 tgaggcgcagc 838
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 293 bits (148), Expect = 3e-76 Identities = 309/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 373 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 431 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 151 gaatact 157 ||||||| Sbjct: 930 gaatact 936 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||| Sbjct: 781 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgt 840 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 841 tgaggcgcagc 851
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 293 bits (148), Expect = 3e-76 Identities = 309/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 373 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 431 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 151 gaatact 157 ||||||| Sbjct: 5504 gaatact 5510 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||| Sbjct: 5355 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgt 5414 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 5415 tgaggcgcagc 5425
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 293 bits (148), Expect = 3e-76 Identities = 307/359 (85%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 190228 Score = 293 bits (148), Expect = 3e-76 Identities = 307/359 (85%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 151655 Score = 170 bits (86), Expect = 3e-39 Identities = 140/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||| |||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 189700 agttgtggctaggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatg 189759 Query: 61 cgttgaggcgcagcagttgactggacatctagggg-taaagcactgtttcggtgcgggct 119 ||||||||||||| ||||| |||| |||| |||||||||||||||||||||||| Sbjct: 189760 tgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgtttcggtgcgggct 189819 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatac 156 ||| ||||||||||||||||||||||||||||||||| Sbjct: 189820 gcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 170 bits (86), Expect = 3e-39 Identities = 140/157 (89%), Gaps = 1/157 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||| |||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 151127 agttgtggctaggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatg 151186 Query: 61 cgttgaggcgcagcagttgactggacatctagggg-taaagcactgtttcggtgcgggct 119 ||||||||||||| ||||| |||| |||| |||||||||||||||||||||||| Sbjct: 151187 tgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgtttcggtgcgggct 151246 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatac 156 ||| ||||||||||||||||||||||||||||||||| Sbjct: 151247 gcgagagcggtaccaaatcgaggcaaactctgaatac 151283
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 165 bits (83), Expect = 2e-37 Identities = 141/160 (88%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||| Sbjct: 791 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgt 850 Query: 64 tgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| ||| || || ||||||||||||||||||||||||||||||||| Sbjct: 851 tgaggcgcagcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctg 910 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 || |||||||||||||||| ||||||| |||||||||| Sbjct: 911 cgagagcggtaccaaatcgtagcaaactaagaatactaga 950 Score = 121 bits (61), Expect = 3e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 547 aaaac 551 ||||| Sbjct: 1359 aaaac 1363 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 atcggtaggggagcgttccgc 450 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 7e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 189 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 248 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 249 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 308 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 309 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 368 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 369 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 428 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 429 catcggtaggggagcgttccgc 450 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 151 bits (76), Expect = 3e-33 Identities = 142/163 (87%), Gaps = 6/163 (3%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||| ||| |||||| | | |||||||||||||||||||||| Sbjct: 771 agttgtggttaggggtgaaataccagtcgaactcggagctagctggttctccccgaaatg 830 Query: 61 cgttgaggcgcagcagttga-----ctggaca-tctaggggtaaagcactgtttcggtgc 114 |||||||||||||| || || ||| || ||||||||||||||||||||||||||| Sbjct: 831 cgttgaggcgcagcggtcgattaagatgggcagtctaggggtaaagcactgtttcggtgc 890 Query: 115 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 157 |||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 891 gggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 543 cccgaaaac 551 |||||||| Sbjct: 1300 tccgaaaac 1308
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 303/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 189305 Score = 274 bits (138), Expect = 3e-70 Identities = 303/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 150862 Score = 178 bits (90), Expect = 1e-41 Identities = 144/160 (90%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||| |||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 188777 agttgtggctaggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatg 188836 Query: 61 cgttgaggcgcagcagttgactgg--acatctaggggtaaagcactgtttcggtgcgggc 118 ||||||||||||| ||||| || | | ||||||||||||||||||||||||||||| Sbjct: 188837 tgttgaggcgcagcggttga-tgcttaaacttaggggtaaagcactgtttcggtgcgggc 188895 Query: 119 tgcgcgagcggtaccaaatcgaggcaaactctgaatacta 158 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 188896 tgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 178 bits (90), Expect = 1e-41 Identities = 144/160 (90%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||| |||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 150334 agttgtggctaggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatg 150393 Query: 61 cgttgaggcgcagcagttgactgg--acatctaggggtaaagcactgtttcggtgcgggc 118 ||||||||||||| ||||| || | | ||||||||||||||||||||||||||||| Sbjct: 150394 tgttgaggcgcagcggttga-tgcttaaacttaggggtaaagcactgtttcggtgcgggc 150452 Query: 119 tgcgcgagcggtaccaaatcgaggcaaactctgaatacta 158 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 150453 tgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 105 bits (53), Expect = 2e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 401 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 460 Query: 64 tgaggcgcagcagttg 79 ||||||||||| |||| Sbjct: 461 tgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 152 aatac 156 ||||| Sbjct: 550 aatac 554 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaa 522 |||| ||||||||||||||||||| |||||| Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaa 903
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 182 bits (92), Expect = 8e-43 Identities = 147/163 (90%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 926 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 985 Query: 61 cgttgaggcgcagcagttgac-tggac-atctaggggtaaagcactgtttcggtgcgggc 118 |||||||||||||| ||| || ||| | ||||||||||||||||||||||||||||||| Sbjct: 986 cgttgaggcgcagcggttaacgtgggcggtctaggggtaaagcactgtttcggtgcgggc 1045 Query: 119 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 161 |||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1046 tgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 147 bits (74), Expect = 4e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 430 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 489 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 550 ac 551 || Sbjct: 1530 ac 1531
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 186 bits (94), Expect = 5e-44 Identities = 147/163 (90%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 780 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 839 Query: 61 cgttgaggcgcagcagttgac---tggac-atctaggggtaaagcactgtttcggtgcgg 116 |||||||||||||| |||||| ||| | |||||||||||||||||||||||||||||| Sbjct: 840 cgttgaggcgcagcggttgacgaatgggctatctaggggtaaagcactgtttcggtgcgg 899 Query: 117 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 |||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 900 gctgcgagagcggtaccaaatcgtagcaaactaagaatactag 942 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1328 cccgaaaac 1336 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 atcggtaggggagcgttccgc 450 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 147 bits (74), Expect = 4e-32 Identities = 107/118 (90%) Strand = Plus / Plus Query: 432 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 491 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1309 Score = 109 bits (55), Expect = 1e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 769 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 828 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 829 cgttgaggcgcagc 842 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 87 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 146 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 147 ctctgaatactagata 162 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 430 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 431 tcggtaggggagcgttccg 449 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 151 bits (76), Expect = 3e-33 Identities = 141/161 (87%), Gaps = 4/161 (2%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||| Sbjct: 781 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgt 840 Query: 64 tgaggcgcagcagtt---gactggaca-tctaggggtaaagcactgtttcggtgcgggct 119 ||||||||||| ||| || | | | |||||||||| |||||||| |||||||||||| Sbjct: 841 tgaggcgcagcggttgatgattaggctgtctaggggtagagcactgtctcggtgcgggct 900 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 ||| |||||||||||||||| |||||||| |||||||||| Sbjct: 901 gcgagagcggtaccaaatcgtagcaaactccgaatactaga 941 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 548 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 549 a 549 | Sbjct: 1312 a 1312
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 414 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 414 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||| ||||||||||||| Sbjct: 170728 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggatctccccgaaatg 170669 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 170668 cgttgaggcgcagc 170655 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||| ||||||||||||| Sbjct: 122198 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggatctccccgaaatg 122257 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 122258 cgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 151 gaatact 157 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaac 170176 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaac 122750 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 151 gaatact 157 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 431 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 432 cggtaggggagcgttccg 449 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 2478 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 2537 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 2538 tgttgaggcgcagc 2551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 497 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3007 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 152 aatac 156 ||||| Sbjct: 2630 aatac 2634
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 250 bits (126), Expect = 4e-63 Identities = 300/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 17738 Score = 250 bits (126), Expect = 4e-63 Identities = 300/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 434 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 435 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 494 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 495 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 3128 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 90 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 148 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 149 ctgaatacta 158 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 90 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 148 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 149 ctgaatacta 158 |||||||||| Sbjct: 2748 ctgaatacta 2757 Score = 93.7 bits (47), Expect = 6e-16 Identities = 67/74 (90%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||| ||| ||||| || | |||||||| ||||||||||||| Sbjct: 18268 agttgtggttaggggtgaaattccaatcgaatccggagctagctggatctccccgaaatg 18209 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 18208 cgttgaggcgcagc 18195 Score = 93.7 bits (47), Expect = 6e-16 Identities = 67/74 (90%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||| ||| ||||| || | |||||||| ||||||||||||| Sbjct: 2598 agttgtggttaggggtgaaattccaatcgaatccggagctagctggatctccccgaaatg 2657 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 2658 cgttgaggcgcagc 2671
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 414 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||| ||||||||||||| Sbjct: 789 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggatctccccgaaatg 848 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 849 cgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaac 1341 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 151 gaatact 157 ||||||| Sbjct: 960 gaatact 966
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 152 aatac 156 ||||| Sbjct: 548 aatac 552 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 399 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 458 Query: 64 tgaggcgcagc 74 |||||| |||| Sbjct: 459 tgaggcacagc 469 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 489 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 ||||||| ||||||||||||||||||| || ||| | ||||||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcc 911
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 417 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 168 bits (85), Expect = 1e-38 Identities = 145/163 (88%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||||| Sbjct: 911 agttgtggttaggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatg 970 Query: 61 cgttgaggcgcagcagttgac--tggaca-tctaggggtaaagcactgtttcggtgcggg 117 |||||||||||||| ||| || ||| | |||||||||||||||||||||||||||||| Sbjct: 971 cgttgaggcgcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcggg 1030 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 ||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 1031 ctgcgagagcggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 121 bits (61), Expect = 3e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 547 aaaac 551 ||||| Sbjct: 1454 aaaac 1458
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 395 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 454 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 455 tgttgaggcgcagc 468 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 152 aatac 156 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 5434589 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 5434530 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 5434529 tgttgaggcgcagc 5434516 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 3896849 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 3896908 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 3896909 tgttgaggcgcagc 3896922 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 2807310 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 2807251 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 2807250 tgttgaggcgcagc 2807237 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 1005692 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 1005751 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 1005752 tgttgaggcgcagc 1005765 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 152 aatac 156 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 152 aatac 156 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 152 aatac 156 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 152 aatac 156 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 5944629 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 5944570 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 5944569 tgttgaggcgcagc 5944556 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 4916985 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 4916926 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 4916925 tgttgaggcgcagc 4916912 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 2503311 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 2503370 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 2503371 tgttgaggcgcagc 2503384 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 2378520 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 2378579 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 2378580 tgttgaggcgcagc 2378593 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 152 aatac 156 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 152 aatac 156 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 152 aatac 156 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 152 aatac 156 ||||| Sbjct: 2378672 aatac 2378676
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 244 bits (123), Expect = 3e-61 Identities = 319/383 (83%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 169 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 228 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 229 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 288 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 289 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 348 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 349 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 408 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 409 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 468 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 469 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 528 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 529 tgagaatccaatgccccgaaaac 551 ||||||||||| |||| ||||| Sbjct: 1298 cgagaatccaattccccaaaaac 1320 Score = 172 bits (87), Expect = 8e-40 Identities = 147/166 (88%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| Sbjct: 768 agttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttcgccccgaaatg 827 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 | || ||||||||||||| || || ||||||||||||||||| ||||| |||||||| Sbjct: 828 catttaggcgcagcagtt-accgggcatctaggggtaaagcattgttttggtgcgggtca 886 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 166 || |||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 887 cgagagcggtaccaaattgaggcagactatgaatactagatatgac 932
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1342 cccgaaaac 1350 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 797 tgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 856 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 857 tgaggcgcagc 867 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 88 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 147 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 148 tctgaatactaga 160 || |||||||||| Sbjct: 944 tcagaatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 3111 cccgaaaac 3119 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 2566 tgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 2625 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 2626 tgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 88 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 147 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 148 tctgaatactaga 160 || |||||||||| Sbjct: 2713 tcagaatactaga 2725
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 119 bits (60), Expect = 1e-23 Identities = 133/156 (85%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | |||||||||||||||||||||| || Sbjct: 2314 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgtgt 2373 Query: 64 tgaggcgcagcagttgactggacatcta---ggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| || | |||| | || ||||||||||||||||||| |||||||| Sbjct: 2374 tgaggcgcagcggt--agtggaagtttagtcggggtaaagcactgtttcgccgcgggctg 2431 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatac 156 | || ||||||||| ||||||||||||||||||| Sbjct: 2432 ggagaccggtaccaaggcgaggcaaactctgaatac 2467 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcc 2823
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 543 cccgaaa 549 ||||||| Sbjct: 919 cccgaaa 925 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 395 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 454 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 455 tgttgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 151 gaatact 157 ||||||| Sbjct: 546 gaatact 552
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 167 bits (84), Expect = 5e-38 Identities = 144/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| |||||||| ||| |||||| | | |||||||||||||||||||||| Sbjct: 769 agttgtggttagcggtgaaataccagtcgaactcggagctagctggttctccccgaaatg 828 Query: 61 cgttgaggcgcagcagttgactggaca-tctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||| ||| | | | | |||||||||||||||||||||||||||||| Sbjct: 829 cgttgaggcgcagcggtttataaggctgtttaggggtaaagcactgtttcggtgcgggct 888 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagata 162 ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 889 gcgaaagcggtaccaaatcgtggcaaactctgaatactagata 931 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1298 cccgaaaac 1306
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 167 bits (84), Expect = 5e-38 Identities = 144/163 (88%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| |||||||| ||| |||||| | | |||||||||||||||||||||| Sbjct: 25578 agttgtggttagcggtgaaataccagtcgaactcggagctagctggttctccccgaaatg 25637 Query: 61 cgttgaggcgcagcagttgactggaca-tctaggggtaaagcactgtttcggtgcgggct 119 |||||||||||||| ||| | | | | |||||||||||||||||||||||||||||| Sbjct: 25638 cgttgaggcgcagcggtttataaggctgtttaggggtaaagcactgtttcggtgcgggct 25697 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatactagata 162 ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 25698 gcgaaagcggtaccaaatcgtggcaaactctgaatactagata 25740 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 26107 cccgaaaac 26115
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 372 ttgcgctgaagatgaacggggctaag 397 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaaccgggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 458 tgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 543 cccgaaa 549 || |||| Sbjct: 920 cctgaaa 926 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 152 aatactagat 161 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 1e-57 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 427 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 428 gcatcggtaggggagcgttccg 449 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 152 aatac 156 ||||| Sbjct: 547 aatac 551 Score = 87.7 bits (44), Expect = 4e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagc 74 | ||||||||| Sbjct: 458 ttaggcgcagc 468 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 543 cccgaaa 549 ||||||| Sbjct: 921 cccgaaa 927
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 119 bits (60), Expect = 1e-23 Identities = 133/156 (85%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagcagttgactggacatcta---ggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| || | |||| | || ||||||||||||||||||| |||||||| Sbjct: 458 tgaggcgcagcggt--agtggaagtttagtcggggtaaagcactgtttcgccgcgggctg 515 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatac 156 | || ||||||||| ||||||||||||||||||| Sbjct: 516 ggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcc 906
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 139 bits (70), Expect = 1e-29 Identities = 139/159 (87%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 395 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 454 Query: 61 cgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttcggtgcggg 117 ||| ||||||||| || ||| | | |||| | ||||||||||||||||||||||||| Sbjct: 455 tgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttcggtgcggg 512 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatac 156 ||| | || ||||||||||||||| |||||||||||||| Sbjct: 513 ctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 543 cccgaaa 549 ||||||| Sbjct: 919 cccgaaa 925 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 atcggtaggggagcgttccg 449 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 395 agttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatg 454 Query: 61 cgttgaggcgcagc 74 ||||||||||||| Sbjct: 455 tgttgaggcgcagc 468 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 152 aatac 156 ||||| Sbjct: 547 aatac 551
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 230 bits (116), Expect = 4e-57 Identities = 151/163 (92%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 141871 agttgtggttagcggtgaaatgccactcgaacccagagctagctggttctccctgaaatg 141812 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 141811 cgttgaggcgcagcagttgactggacatttaggggtaaagcattgtttcggcacgggccg 141752 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactagatat 163 || ||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141751 cgggagcggttccaaatcgaggcaaactctgaatattagatat 141709
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 125 bits (63), Expect = 2e-25 Identities = 121/138 (87%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 2051072 tgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgt 2051013 Query: 64 tgaggcgcagcagttgactgg-acatctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| || ||| || || | |||||| ||||||| ||||||||||| ||| Sbjct: 2051012 tgaggcgcagc-gtcgacgggtacctggtggggtagagcactgaatcggtgcgggcggcg 2050954 Query: 123 cgagcggtaccaaatcga 140 |||| |||||||||||| Sbjct: 2050953 agagctgtaccaaatcga 2050936 Score = 125 bits (63), Expect = 2e-25 Identities = 121/138 (87%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 1450429 tgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgt 1450488 Query: 64 tgaggcgcagcagttgactgg-acatctaggggtaaagcactgtttcggtgcgggctgcg 122 ||||||||||| || ||| || || | |||||| ||||||| ||||||||||| ||| Sbjct: 1450489 tgaggcgcagc-gtcgacgggtacctggtggggtagagcactgaatcggtgcgggcggcg 1450547 Query: 123 cgagcggtaccaaatcga 140 |||| |||||||||||| Sbjct: 1450548 agagctgtaccaaatcga 1450565 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||| |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaac 2050555 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 ||| |||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaac 1450946
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 137800 cccgaaaac 137808 Score = 105 bits (53), Expect = 2e-19 Identities = 135/162 (83%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||| ||||| | | |||||| | | ||||||||||||| ||||||| Sbjct: 137264 agttgtggttaggggagaaattctaatcgaactcggagctagctggttctcttcgaaatg 137323 Query: 61 cgttgaggcgcagcagttg---actggacatctaggggtaaagcactgtttcggtgcggg 117 ||||||||||||| |||| || || |||||||||||||||||||||||||||||| Sbjct: 137324 tgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcggg 137383 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 ||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137384 ctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 105 bits (53), Expect = 2e-19 Identities = 135/162 (83%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||| ||||| | | |||||| | | ||||||||||||| ||||||| Sbjct: 48280 agttgtggttaggggagaaattctaatcgaactcggagctagctggttctcttcgaaatg 48221 Query: 61 cgttgaggcgcagcagttg---actggacatctaggggtaaagcactgtttcggtgcggg 117 ||||||||||||| |||| || || |||||||||||||||||||||||||||||| Sbjct: 48220 tgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcggg 48161 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 ||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48160 ctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 47744 cccgaaaac 47736
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 373 tgcgctgaagatgaacggggctaag 397 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 152 aatac 156 ||||| Sbjct: 548 aatac 552 Score = 111 bits (56), Expect = 2e-21 Identities = 67/71 (94%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 399 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgcgt 458 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 459 tgaggcgcagc 469 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcc 911
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 417 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 174 bits (88), Expect = 2e-40 Identities = 145/162 (89%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct: 844 agttgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatg 903 Query: 61 cgttgaggcgcagcagttga--ctg-gacatctaggggtaaagcactgtttcggtgcggg 117 |||||||||||||| ||||| || | |||||||||||||||||||||||||||||| Sbjct: 904 cgttgaggcgcagcggttgatgttgagctgtctaggggtaaagcactgtttcggtgcggg 963 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 964 ctgcgagagcggtaccaaatcgtagcaaactaagaatactag 1005 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1492 cccgaaaac 1500
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 224 bits (113), Expect = 2e-55 Identities = 302/361 (83%), Gaps = 3/361 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 251 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 372 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 430 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 431 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 490 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 491 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 550 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 551 c 551 | Sbjct: 1312 c 1312 Score = 192 bits (97), Expect = 8e-46 Identities = 146/162 (90%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| | | |||||||||||||||||||||| Sbjct: 774 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 833 Query: 61 cgttgaggcgcagcagttgact---ggacatctaggggtaaagcactgtttcggtgcggg 117 |||||||||||||| || | | || ||||||||||||||||||||||||||||||| Sbjct: 834 cgttgaggcgcagcggtgggtttagggctatctaggggtaaagcactgtttcggtgcggg 893 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 159 ||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 894 ctgcgagagcggtaccaaatcgagacaaactctgaatactag 935
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 111 bits (56), Expect = 2e-21 Identities = 132/156 (84%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | |||||||||||||||||||||| || Sbjct: 2313 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgtgt 2372 Query: 64 tgaggcgcagcagttgactggacatcta---ggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| || | |||| | || ||||||||||||||||||| |||||||| Sbjct: 2373 tgaggcgcagcggt--agtggaagtttagtcggggtaaagcactgtttcgccgcgggctg 2430 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatac 156 | || |||||||| ||||||||||||||||||| Sbjct: 2431 ggagaccggtaccagggcgaggcaaactctgaatac 2466 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcc 2822
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 125 bits (63), Expect = 2e-25 Identities = 135/156 (86%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttcggtgcgggctg 120 | ||||||||| || ||| | | |||| | |||||||||||||||||||||||||||| Sbjct: 458 ttaggcgcagcggtaatgatt--aaatctggggggtaaagcactgtttcggtgcgggctg 515 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatac 156 | || ||||||||||||||| ||||||| |||||| Sbjct: 516 ggagaccggtaccaaatcgagacaaactcagaatac 551 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagta 515 |||||| ||||||||||||||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagta 893
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 121 bits (61), Expect = 3e-24 Identities = 132/155 (85%), Gaps = 2/155 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 3327796 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 3327855 Query: 64 tgaggcgcagcagttgactggacatct--aggggtaaagcactgtttcggtgcgggctgc 121 | ||||||||| |||| | || || ||||||||||||||||||| ||||||| || Sbjct: 3327856 ttaggcgcagcggttgtaaagtcaacttggggggtaaagcactgtttcgctgcgggcggc 3327915 Query: 122 gcgagcggtaccaaatcgaggcaaactctgaatac 156 | |||| |||||||| ||||||||||| |||||| Sbjct: 3327916 gagagctgtaccaaagtgaggcaaactcagaatac 3327950 Score = 121 bits (61), Expect = 3e-24 Identities = 132/155 (85%), Gaps = 2/155 (1%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 2450932 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 2450873 Query: 64 tgaggcgcagcagttgactggacatct--aggggtaaagcactgtttcggtgcgggctgc 121 | ||||||||| |||| | || || ||||||||||||||||||| ||||||| || Sbjct: 2450872 ttaggcgcagcggttgtaaagtcaacttggggggtaaagcactgtttcgctgcgggcggc 2450813 Query: 122 gcgagcggtaccaaatcgaggcaaactctgaatac 156 | |||| |||||||| ||||||||||| |||||| Sbjct: 2450812 gagagctgtaccaaagtgaggcaaactcagaatac 2450778 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 3328319 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 2450409
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 119 bits (60), Expect = 1e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 2313080 tgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgt 2313139 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 2313140 tgaggcgcagc 2313150 Score = 119 bits (60), Expect = 1e-23 Identities = 68/71 (95%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 1108767 tgtggttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgt 1108708 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 1108707 tgaggcgcagc 1108697 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 2313589 cccgaaaac 2313597 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1108258 cccgaaaac 1108250
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 147 bits (74), Expect = 4e-32 Identities = 138/159 (86%), Gaps = 3/159 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | ||||||||||||||||||||||||| Sbjct: 757 tgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgt 816 Query: 64 tgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| ||| ||| || |||||||||||||||||||||||||||||||| Sbjct: 817 tgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggcta 876 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactag 159 || || |||||||||||| ||||||| ||||||||| Sbjct: 877 cgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 487 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 546 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 547 aaaac 551 ||||| Sbjct: 1296 aaaac 1300 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 atcggtaggggagcgttccg 449 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 220 bits (111), Expect = 4e-54 Identities = 125/130 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 304 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 363 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 364 cgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccg 423 Query: 121 cgcgagcggt 130 || ||||||| Sbjct: 424 cgagagcggt 433
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 372 ttgcgctgaagatgaacggggctaag 397 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaaccgggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 458 tgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 543 cccgaaa 549 || |||| Sbjct: 918 cctgaaa 924 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 152 aatactagat 161 ||||| |||| Sbjct: 547 aataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 152 aatac 156 ||||| Sbjct: 2333890 aatac 2333886 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 543 cccgaaa 549 ||||||| Sbjct: 2333521 cccgaaa 2333515 Score = 85.7 bits (43), Expect = 1e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| || Sbjct: 2334039 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatatgt 2333980 Query: 64 tgaggc 69 |||||| Sbjct: 2333979 tgaggc 2333974
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 205 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 264 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 265 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 324 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 325 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 384 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 385 gaacggggctaagcgatctgccgaagctgtgggatgt 421 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 159 bits (80), Expect = 1e-35 Identities = 140/159 (88%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| |||||||||||| |||||||| | |||||||||||||||||||||| Sbjct: 1226 agttgtggttagcggtgaaatgccaatcgaacccggagctagctggttctccccgaaatg 1285 Query: 61 cgttgaggcgcagcagttgactggacatct-aggggtaaagcactgtttcggtgcgggct 119 ||||||||||||| ||| | | | || ||||||||||||||||||||||||||||| Sbjct: 1286 tgttgaggcgcagcggttaagattataacttaggggtaaagcactgtttcggtgcgggct 1345 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatacta 158 ||| ||||||||||||||||| ||||||| |||||||| Sbjct: 1346 gcgagagcggtaccaaatcgatgcaaactaagaatacta 1384 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1786 cccgaaaac 1794
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 133 bits (67), Expect = 7e-28 Identities = 136/156 (87%), Gaps = 5/156 (3%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttcggtgcgggctg 120 | ||||||||| || ||| | | |||| | |||||||||||||||||||||||||||| Sbjct: 458 ttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttcggtgcgggctg 515 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatac 156 | || ||||||||||||||| |||||||||||||| Sbjct: 516 ggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagta 515 |||||| |||||| ||||||||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagta 893
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagct 412 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 149 bits (75), Expect = 1e-32 Identities = 139/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 64 tgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| || ||| || |||||||||||||| |||||||||||||||||| Sbjct: 840 tgaggcgcagcggtaaatgatgggctgtctaggggtaaagctctgtttcggtgcgggctg 899 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 || ||||||||||||||| |||||||| |||||||||| Sbjct: 900 cgaaagcggtaccaaatcgtggcaaactaagaatactaga 939 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1324
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagct 412 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 149 bits (75), Expect = 1e-32 Identities = 139/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| | | ||||||||||||||||||||||||| Sbjct: 2662 tgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 2721 Query: 64 tgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| || ||| || |||||||||||||| |||||||||||||||||| Sbjct: 2722 tgaggcgcagcggtaaatgatgggctgtctaggggtaaagctctgtttcggtgcgggctg 2781 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatactaga 160 || ||||||||||||||| |||||||| |||||||||| Sbjct: 2782 cgaaagcggtaccaaatcgtggcaaactaagaatactaga 2821 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 433 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 492 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 493 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3206
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 205 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 264 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 265 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 324 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 325 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 384 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 385 gaacggggctaagcgatctgccgaagctgtgggat 419 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 119 bits (60), Expect = 1e-23 Identities = 135/158 (85%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| ||| |||||||| ||||| ||||||| || Sbjct: 812 tgtggttaggggtgaaattccagtcgaactcagagctagctggatctcctcgaaatgtgt 871 Query: 64 tgaggcgcagcagttga--ctggac-atctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| ||||| ||| | | ||||||||||||||||||||||||||||||| Sbjct: 872 tgaggcgcagcggttgatgatgggctagttaggggtaaagcactgtttcggtgcgggctg 931 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatacta 158 || |||||||| |||||| ||||||| |||||||| Sbjct: 932 cgaaagcggtactaaatcgtcgcaaactaagaatacta 969 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1341 cccgaaaac 1349
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 212 bits (107), Expect = 9e-52 Identities = 297/358 (82%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 433 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 434 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 493 |||||||||||||| | |||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctg-cttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 494 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 551 || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaac 2994 Score = 131 bits (66), Expect = 3e-27 Identities = 106/120 (88%) Strand = Plus / Plus Query: 39 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 98 |||||||||||||||||||||||||||||||||||| ||||| | | ||||||||| Sbjct: 2506 ctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggtaa 2565 Query: 99 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 158 |||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| Sbjct: 2566 agcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatacta 2625
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 152 aatac 156 ||||| Sbjct: 547 aatac 551 Score = 87.7 bits (44), Expect = 4e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||| ||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcctcgaaatgtgt 457 Query: 64 tgaggcgcagc 74 |||||| |||| Sbjct: 458 tgaggcacagc 468 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcc 911
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 374 gcgctgaagatgaacggggctaagc 398 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 543 cccgaaa 549 |||||| Sbjct: 907 tccgaaa 913 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 152 aatac 156 ||||| Sbjct: 545 aatac 549 Score = 79.8 bits (40), Expect = 9e-12 Identities = 63/71 (88%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| ||||||| | |||||||||||||||||||||| || Sbjct: 396 tgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctccccgaaatgtgt 455 Query: 64 tgaggcgcagc 74 | |||| |||| Sbjct: 456 ttaggcacagc 466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 149 bits (75), Expect = 1e-32 Identities = 135/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 457 Query: 64 tgaggcgcagcagttgactggacatctag-gggtaaagcactgtttcggtgcgggctgcg 122 | ||||||||| || | |||||| |||||||||||||||||||||||||||||| Sbjct: 458 ttaggcgcagcggtaacgattaaatctagggggtaaagcactgtttcggtgcgggctgcg 517 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatac 156 |||||||||||||||||| ||||||| |||||| Sbjct: 518 agagcggtaccaaatcgagacaaactcagaatac 551 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 543 cccgaaa 549 ||||||| Sbjct: 915 cccgaaa 921
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 6e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 121 bits (61), Expect = 3e-24 Identities = 132/155 (85%), Gaps = 2/155 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 399 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 458 Query: 64 tgaggcgcagcagttgactggacatct--aggggtaaagcactgtttcggtgcgggctgc 121 | ||||||||| |||| | || || ||||||||||||||||||| ||||||| || Sbjct: 459 ttaggcgcagcggttgtaaagtcaacttggggggtaaagcactgtttcgctgcgggcggc 518 Query: 122 gcgagcggtaccaaatcgaggcaaactctgaatac 156 | |||| |||||||| ||||||||||| |||||| Sbjct: 519 gagagctgtaccaaagtgaggcaaactcagaatac 553 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 921
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 131 bits (66), Expect = 3e-27 Identities = 138/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| ||| |||||||| ||||| ||||||| Sbjct: 787 agttgtggttaggggtgaaatgccaatcgaactcagagctagctggatctcctcgaaatg 846 Query: 61 cgttgaggcgcagcagttgac--tggacatct-aggggtaaagcactgtttcggtgcggg 117 |||||||||||||| |||| | ||| | | | |||||||||||||||||||| |||||| Sbjct: 847 cgttgaggcgcagcggttgtcgatgggcttttaaggggtaaagcactgtttcgatgcggg 906 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 157 ||| | ||||||||||||||| ||||||| ||||||| Sbjct: 907 ctgtgaaagcggtaccaaatcgttgcaaactaagaatact 946 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1321 cccgaaaac 1329
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 360 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 131 bits (66), Expect = 3e-27 Identities = 138/160 (86%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||| ||| |||||||| ||||| ||||||| Sbjct: 2525 agttgtggttaggggtgaaatgccaatcgaactcagagctagctggatctcctcgaaatg 2584 Query: 61 cgttgaggcgcagcagttgac--tggacatct-aggggtaaagcactgtttcggtgcggg 117 |||||||||||||| |||| | ||| | | | |||||||||||||||||||| |||||| Sbjct: 2585 cgttgaggcgcagcggttgtcgatgggcttttaaggggtaaagcactgtttcgatgcggg 2644 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 157 ||| | ||||||||||||||| ||||||| ||||||| Sbjct: 2645 ctgtgaaagcggtaccaaatcgttgcaaactaagaatact 2684 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 3059 cccgaaaac 3067
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 397 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 456 Query: 64 tgaggcgcagc 74 | ||||||||| Sbjct: 457 ttaggcgcagc 467 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 151 gaatact 157 ||||||| Sbjct: 545 gaatact 551 Score = 44.1 bits (22), Expect = 0.48 Identities = 49/58 (84%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaa 927
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 419 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||||||||||| || Sbjct: 397 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgt 456 Query: 64 tgaggcgcagc 74 | ||||||||| Sbjct: 457 ttaggcgcagc 467 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 151 gaatact 157 ||||||| Sbjct: 545 gaatact 551 Score = 44.1 bits (22), Expect = 0.48 Identities = 49/58 (84%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaa 927
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 9e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 87.7 bits (44), Expect = 4e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | | |||||||| |||||| ||||||||| Sbjct: 785 tgtggttaggggtgaaatgccagtcgaactcggagctagctggatctccctgaaatgcgt 844 Query: 64 tgaggcgcagc 74 ||||||||||| Sbjct: 845 tgaggcgcagc 855 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 91 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||| Sbjct: 874 aggggtaaagcactgtttcggtgcgggctgcgaaagtggtaccaaatcgtagcaaactca 933 Query: 151 gaatact 157 ||||||| Sbjct: 934 gaatact 940 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacg 518 |||| |||||||||||||||||||||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacg 1285
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 9e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 421 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 9e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 421 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 198 bits (100), Expect = 1e-47 Identities = 145/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct: 114654 agttgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatg 114595 Query: 61 cgttgaggcgcagcagttgactggacatct-aggggtaaagcactgtttcggtgcgggct 119 ||||||||||||| ||||| | | || ||||||||||||||||||||||||||||| Sbjct: 114594 tgttgaggcgcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggct 114535 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatacta 158 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 114534 gcgagagcggtaccaaatcgaggcaaactctgaatacta 114496 Score = 198 bits (100), Expect = 1e-47 Identities = 145/159 (91%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||| Sbjct: 2863 agttgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatg 2922 Query: 61 cgttgaggcgcagcagttgactggacatct-aggggtaaagcactgtttcggtgcgggct 119 ||||||||||||| ||||| | | || ||||||||||||||||||||||||||||| Sbjct: 2923 tgttgaggcgcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggct 2982 Query: 120 gcgcgagcggtaccaaatcgaggcaaactctgaatacta 158 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 2983 gcgagagcggtaccaaatcgaggcaaactctgaatacta 3021 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 550 ac 551 || Sbjct: 114116 ac 114115 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 490 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 550 ac 551 || Sbjct: 3401 ac 3402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 catcggtaggggagcgttccg 449 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 catcggtaggggagcgttccg 449 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 416 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 141 bits (71), Expect = 3e-30 Identities = 134/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | |||||||||||||| ||||||| || Sbjct: 398 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcctcgaaatgtgt 457 Query: 64 tgaggcgcagcagttgactggacatctagggg-taaagcactgtttcggtgcgggctgcg 122 |||||| |||| |||| ||| || |||| |||||||||| |||||||||||||||| Sbjct: 458 tgaggcacagcggttgtgattacagctggggggtaaagcactgattcggtgcgggctgcg 517 Query: 123 cgagcggtaccaaatcgaggcaaactctgaatac 156 |||||||||||||||||| ||||||| |||||| Sbjct: 518 agagcggtaccaaatcgagtcaaactcagaatac 551 Score = 99.6 bits (50), Expect = 9e-18 Identities = 56/58 (96%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 923
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 200 bits (101), Expect = 3e-48 Identities = 112/116 (96%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 300 agttgtggttaggggtgaaatgccactcgaacccagagctagctggctctccccgaaatg 359 Query: 61 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 116 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 226 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 285 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 286 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 344 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 345 gcgtaatagctcactg 360 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 5e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 374 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 432 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 433 ggtaggggagcgttc 447 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 93.7 bits (47), Expect = 6e-16 Identities = 67/74 (90%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||||||| ||||| | | |||||||||||||||||||||| Sbjct: 2517 agttgtggttaggggtgaaatgccaatcgaattcggagctagctggttctccccgaaatg 2576 Query: 61 cgttgaggcgcagc 74 |||| ||||||||| Sbjct: 2577 cgtttaggcgcagc 2590 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 3041 cccgaaaac 3049
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 205 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 264 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 265 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 324 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 325 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 384 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 385 gaacggggctaagcgatctgccgaagctgtgggat 419 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 205 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 264 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 265 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 324 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 325 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 384 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 385 gaacggggctaagcgatctgccgaagctgtgggat 419 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 119 bits (60), Expect = 1e-23 Identities = 135/158 (85%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| | | |||||||| ||||| ||||||| || Sbjct: 192643 tgtggttaggggtgaaattccagtcgaactcggagctagctggatctcctcgaaatgtgt 192702 Query: 64 tgaggcgcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| ||||| ||| | || ||||||||||||||||||||||||||||||| Sbjct: 192703 tgaggcgcagcggttgatgatgggctatttaggggtaaagcactgtttcggtgcgggctg 192762 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatacta 158 || |||||||| |||||| ||||||| |||||||| Sbjct: 192763 cgaaagcggtactaaatcgtcgcaaactaagaatacta 192800 Score = 119 bits (60), Expect = 1e-23 Identities = 135/158 (85%), Gaps = 3/158 (1%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||| ||| |||||| | | |||||||| ||||| ||||||| || Sbjct: 144139 tgtggttaggggtgaaattccagtcgaactcggagctagctggatctcctcgaaatgtgt 144080 Query: 64 tgaggcgcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctg 120 ||||||||||| ||||| ||| | || ||||||||||||||||||||||||||||||| Sbjct: 144079 tgaggcgcagcggttgatgatgggctatttaggggtaaagcactgtttcggtgcgggctg 144020 Query: 121 cgcgagcggtaccaaatcgaggcaaactctgaatacta 158 || |||||||| |||||| ||||||| |||||||| Sbjct: 144019 cgaaagcggtactaaatcgtcgcaaactaagaatacta 143982 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 478 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 538 aatgccccgaaaac 551 |||| ||||||||| Sbjct: 193167 aatgtcccgaaaac 193180 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 478 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 537 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 538 aatgccccgaaaac 551 |||| ||||||||| Sbjct: 143615 aatgtcccgaaaac 143602
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 372 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 418 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 489 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 548 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 549 a 549 | Sbjct: 1335 a 1335 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||| ||| |||||| | | |||||||||||||||||||||| Sbjct: 792 agttgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaatg 851 Query: 61 cgttgaggcgcagc 74 |||||||||||||| Sbjct: 852 cgttgaggcgcagc 865 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 88 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 147 |||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 882 tctaggggtaaagctctgtttcgatgcgggctgcgaaagcggtaccaaatcgtggcaaac 941 Query: 148 tctgaatactaga 160 | |||||||||| Sbjct: 942 taagaatactaga 954 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 tcggtaggggagcgttccgcc 451 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 372 ttgcgctgaagatgaacggggctaag 397 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 372 ttgcgctgaagatgaacggggctaag 397 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 95.6 bits (48), Expect = 1e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||| Sbjct: 1659275 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgt 1659334 Query: 64 tgaggcg 70 ||||||| Sbjct: 1659335 tgaggcg 1659341 Score = 95.6 bits (48), Expect = 1e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||| Sbjct: 1049469 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgt 1049410 Query: 64 tgaggcg 70 ||||||| Sbjct: 1049409 tgaggcg 1049403 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 543 cccgaaa 549 ||||||| Sbjct: 1659793 cccgaaa 1659799 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 543 cccgaaa 549 ||||||| Sbjct: 1048951 cccgaaa 1048945 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 152 aatac 156 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 152 aatac 156 ||||| Sbjct: 1049320 aatac 1049316
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 193 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 252 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 253 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 312 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 313 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 372 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 373 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 432 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 433 ggtaggggagcgttccgc 450 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 157 bits (79), Expect = 5e-35 Identities = 140/160 (87%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 |||||||||||| |||||||||||| |||||| ||| |||||||| ||||||||||||| Sbjct: 757 agttgtggttagcggtgaaatgccaatcgaactcagagctagctggatctccccgaaatg 816 Query: 61 cgttgaggcgcagc---agttgactggacatctaggggtaaagcactgtttcggtgcggg 117 |||||||||||||| ||||| || | || ||||||||||||||||||||||||||| Sbjct: 817 cgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaagcactgtttcggtgcggg 876 Query: 118 ctgcgcgagcggtaccaaatcgaggcaaactctgaatact 157 ||||| ||||||||||||||| |||||||| ||||||| Sbjct: 877 ctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 543 cccgaaaac 551 ||||||||| Sbjct: 1285 cccgaaaac 1293
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 372 ttgcgctgaagatgaacggggctaag 397 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 95.6 bits (48), Expect = 1e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||| Sbjct: 1037 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgt 1096 Query: 64 tgaggcg 70 ||||||| Sbjct: 1097 tgaggcg 1103 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 543 cccgaaa 549 ||||||| Sbjct: 1555 cccgaaa 1561 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 152 aatac 156 ||||| Sbjct: 1186 aatac 1190
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 372 ttgcgctgaagatgaacggggctaag 397 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 192 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 251 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 252 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 311 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 312 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 372 ttgcgctgaagatgaacggggctaag 397 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 95.6 bits (48), Expect = 1e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||| Sbjct: 2657511 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgt 2657452 Query: 64 tgaggcg 70 ||||||| Sbjct: 2657451 tgaggcg 2657445 Score = 95.6 bits (48), Expect = 1e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||| Sbjct: 571410 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgt 571469 Query: 64 tgaggcg 70 ||||||| Sbjct: 571470 tgaggcg 571476 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 543 cccgaaa 549 ||||||| Sbjct: 2656993 cccgaaa 2656987 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 543 cccgaaa 549 ||||||| Sbjct: 571928 cccgaaa 571934 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 152 aatac 156 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 152 aatac 156 ||||| Sbjct: 571559 aatac 571563
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 8e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 195 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 254 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 255 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 314 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 315 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 374 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 375 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 415 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 77.8 bits (39), Expect = 3e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1 agttgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatg 60 ||||||||||||||||||||| ||| |||||| | | |||||||||||||||||||||| Sbjct: 784 agttgtggttaggggtgaaataccaatcgaactcggagctagctggttctccccgaaatg 843 Query: 61 cgttgaggcgcagc 74 | || ||| ||||| Sbjct: 844 catttaggtgcagc 857 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 148 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 878 ggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtagcaaact 934 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 524 |||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 1255 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaaca 1296
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 8e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 194 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 253 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 254 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 313 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 314 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 373 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 374 gcgctgaagatgaacggggctaagc 398 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 483 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 542 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 543 cccgaaa 549 |||||| Sbjct: 1569479 tccgaaa 1569473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 92 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 151 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1569901 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagccaaactccg 1569842 Query: 152 aatac 156 ||||| Sbjct: 1569841 aatac 1569837 Score = 63.9 bits (32), Expect = 5e-07 Identities = 61/71 (85%) Strand = Plus / Minus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||| | ||||||||||||||||||||| || Sbjct: 1569990 tgtggttaggggtgaaatgccaatcgaactaggcgatagctggttctccccgaaatgtgt 1569931 Query: 64 tgaggcgcagc 74 | |||| |||| Sbjct: 1569930 ttaggcacagc 1569920
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 192 bits (97), Expect = 8e-46 Identities = 181/209 (86%) Strand = Plus / Plus Query: 205 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 264 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 265 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 324 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 325 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 384 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3351 Query: 385 gaacggggctaagcgatctgccgaagctg 413 ||||||||||||||| | | ||||||||| Sbjct: 3352 gaacggggctaagcgttttaccgaagctg 3380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 92 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 150 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 151 gaatac 156 |||||| Sbjct: 3139 gaatac 3144 Score = 87.7 bits (44), Expect = 4e-14 Identities = 61/67 (91%) Strand = Plus / Plus Query: 4 tgtggttaggggtgaaatgccactcgaacccagnactagctggttctccccgaaatgcgt 63 |||||||||||||||||||||| |||||||| | ||||||||||||||||||||| ||| Sbjct: 2990 tgtggttaggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatacgt 3049 Query: 64 tgaggcg 70 | ||||| Sbjct: 3050 ttaggcg 3056 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 492 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 549 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 3453 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 3510 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,259,071 Number of Sequences: 3902068 Number of extensions: 3259071 Number of successful extensions: 62815 Number of sequences better than 10.0: 2558 Number of HSP's better than 10.0 without gapping: 2552 Number of HSP's successfully gapped in prelim test: 38 Number of HSP's that attempted gapping in prelim test: 46792 Number of HSP's gapped (non-prelim): 14914 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
