>ELOF1_ORYSA (Q8LHP0) Transcription elongation factor 1 homolog|
          Length = 89

 Score =  149 bits (376), Expect = 7e-36
 Identities = 68/74 (91%), Positives = 71/74 (95%)
 Frame = +3

Query: 252 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWID 431
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEA+C+ICQE+FSTT NALTE IDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWID 75

Query: 432 ECERVNTVEDDDGA 473
           ECERVN VEDDDGA
Sbjct: 76  ECERVNNVEDDDGA 89

>ELOF1_ARATH (Q8LEF3) Transcription elongation factor 1 homolog|
          Length = 120

 Score =  134 bits (338), Expect = 2e-31
 Identities = 61/71 (85%), Positives = 66/71 (92%)
 Frame = +3

Query: 252 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWID 431
           MDKLDT+FSCPFCNHGSSVEC IDMK+LIG+A C+IC+ESFSTT  ALTEAIDIYSEWID
Sbjct: 16  MDKLDTIFSCPFCNHGSSVECIIDMKHLIGKAACRICEESFSTTITALTEAIDIYSEWID 75

Query: 432 ECERVNTVEDD 464
           ECERVNT EDD
Sbjct: 76  ECERVNTAEDD 86

>ELF1_YEAST (P36053) Transcription elongation factor 1|
          Length = 145

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = +3

Query: 252 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWID 431
           + KLDT F+C FCNH  SV C +D KN IG  +C+IC +SF T  N+L++ +D+YS+W D
Sbjct: 16  VQKLDTKFNCLFCNHEKSVSCTLDKKNSIGTLSCKICGQSFQTRINSLSQPVDVYSDWFD 75

Query: 432 ECERVNT---VEDDDG 470
             E VN+    + DDG
Sbjct: 76  AVEEVNSGRGSDTDDG 91

>ELOF1_CAEEL (Q9XVZ8) Transcription elongation factor 1 homolog|
          Length = 84

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 30/63 (47%), Positives = 43/63 (68%)
 Frame = +3

Query: 261 LDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWIDECE 440
           LDT F+CPFCNH    E ++D +  +G  +C++C E F T  N L+E ID+YS+W+D CE
Sbjct: 20  LDTQFNCPFCNHERVCEVKMDREKNVGYISCRVCSEDFQTNINYLSEPIDVYSDWVDACE 79

Query: 441 RVN 449
           + N
Sbjct: 80  QAN 82

>ELOF1_MANSE (Q9U501) Transcription elongation factor 1 homolog|
          Length = 82

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = +3

Query: 252 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWID 431
           ++ LD  F+CPFCNH  S E ++D         C +C E F TT N L+E ID+Y++W+D
Sbjct: 17  IEPLDQQFNCPFCNHEKSCEVKMDRAKNTAMIQCTVCLEDFHTTTNVLSEPIDVYNDWVD 76

Query: 432 ECERVN 449
            CE  N
Sbjct: 77  ACESAN 82

>ELOF1_DROME (Q8MQI6) Transcription elongation factor 1 homolog|
          Length = 82

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +3

Query: 252 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWID 431
           ++ LD  F+CPFCNH  S E ++D      +  C++C E F T  N L+E ID+Y++W+D
Sbjct: 17  IEPLDQQFNCPFCNHEKSCEVKMDKSRNTAKITCRVCLEDFQTGINFLSEPIDVYNDWVD 76

Query: 432 ECERVN 449
            CE  N
Sbjct: 77  ACETAN 82

>ELOF1_SCHPO (O13868) Transcription elongation factor 1 homolog|
          Length = 107

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 29/62 (46%), Positives = 41/62 (66%)
 Frame = +3

Query: 261 LDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWIDECE 440
           LDT F+C FCNH  SV C +D ++ +G  +C+IC +S      AL+  ID+YS+WID C+
Sbjct: 19  LDTTFTCLFCNHEKSVSCSLDKQSGVGNLHCKICGQSHQCLITALSAPIDVYSDWIDACD 78

Query: 441 RV 446
            V
Sbjct: 79  AV 80

>ELOF1_ENCCU (Q8STS7) Transcription elongation factor 1 homolog|
          Length = 80

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = +3

Query: 258 KLDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWIDEC 437
           +L+  F+CP CNH + V+C +    + G ANC +C+ SF+  AN LT  ID+YS W+DEC
Sbjct: 18  RLEKRFNCPVCNHENVVQCTVKKTLMKGFANCSVCEASFACDANKLTTGIDVYSAWVDEC 77

>ELOF1_MOUSE (P60003) Transcription elongation factor 1 homolog|
          Length = 83

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = +3

Query: 261 LDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWIDECE 440
           L+T F+CPFCNH  S + ++D     G  +C +C E F T    L+E +D+YS+WID CE
Sbjct: 20  LETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACE 79

Query: 441 RVN 449
             N
Sbjct: 80  AAN 82

>ELOF1_HUMAN (P60002) Transcription elongation factor 1 homolog|
          Length = 83

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 28/63 (44%), Positives = 39/63 (61%)
 Frame = +3

Query: 261 LDTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESFSTTANALTEAIDIYSEWIDECE 440
           L+T F+CPFCNH  S + ++D     G  +C +C E F T    L+E +D+YS+WID CE
Sbjct: 20  LETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTPITYLSEPVDVYSDWIDACE 79

Query: 441 RVN 449
             N
Sbjct: 80  AAN 82

>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = +2

Query: 56  LPAAAAGIPFSSHSVTSAADADPTPSRSLPGHQVPSPPS 172
           LPAAAA  P + H+ TS+A A  TP  + P    P P S
Sbjct: 423 LPAAAAATPGAGHTNTSSASAAKTPP-TTPAPTTPPPTS 460

>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)|
          Length = 309

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 59  PAAAAGIPFSSHSVTSAADADPTPSRSLPGHQVPSPP 169
           PA A   P + +S +SA  A P P +  PG   P PP
Sbjct: 98  PAQAPSYPQAPYSYSSAGSAAPGPEQPPPGASPPPPP 134

>ENL_HUMAN (Q03111) Protein ENL|
          Length = 559

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +2

Query: 41  AVGRXLPAAAAGIPFSSHSVTSAADADPTPSRSLPGHQVPSPPSRF*SKERSP 199
           A G+  P   + + FS     ++AD+   PSR  P  Q P PP+   S  RSP
Sbjct: 425 AAGKTNPGRDSRLSFSDSESDNSADSS-LPSREPPPPQKPPPPNSKVSGRRSP 476

>MURE_MYCTU (P65477) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 535

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
 Frame = -3

Query: 362 ADLTISLTNQILHINPAFNAAPV--------VAEWAGEDRIE-LVHPLPRGWLGGRLSLP 210
           A LT S T+   H+  A     V        VAE AG   +  LVHP PRG LGG  +  
Sbjct: 79  AALTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVPVLVHPAPRGVLGGLAATV 138

Query: 209 HG 204
           +G
Sbjct: 139 YG 140

>MURE_MYCBO (P65478) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 535

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
 Frame = -3

Query: 362 ADLTISLTNQILHINPAFNAAPV--------VAEWAGEDRIE-LVHPLPRGWLGGRLSLP 210
           A LT S T+   H+  A     V        VAE AG   +  LVHP PRG LGG  +  
Sbjct: 79  AALTGSTTHGARHVGDAIARGAVAVLTDPAGVAEIAGRAAVPVLVHPAPRGVLGGLAATV 138

Query: 209 HG 204
           +G
Sbjct: 139 YG 140

>MEF2D_HUMAN (Q14814) Myocyte-specific enhancer factor 2D|
          Length = 521

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +2

Query: 47  GRXLPAAAAGIPFSSHSVTSAADADPTPSRSLPGHQVPSPPSRF*SKERSPTNH-GEAKG 223
           G  LP   A +  ++H   S      +PSR       P PP+ F +    P +      G
Sbjct: 418 GSPLPHVGAALTVTTHPHISIKSEPVSPSRERS--PAPPPPAVFPAARPEPGDGLSSPAG 475

Query: 224 GRQATP*EEDGQARYGLLLPILQP 295
           G   T   +DG+  +G  L +L+P
Sbjct: 476 GSYETGDRDDGRGDFGPTLGLLRP 499

>FABH_GRATL (Q6B945) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 330

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 387 NALTEAIDIYSEWIDECERVNTVEDDDGA*ACVVIILYEL-NALMSF 524
           N L    D+ S+WID  +R   +   DGA A ++   YE  NA++ F
Sbjct: 134 NILIIGADVLSKWIDWSDRKTCILFGDGAGAAIIQACYEEDNAILGF 180

>MEF2D_MOUSE (Q63943) Myocyte-specific enhancer factor 2D|
          Length = 514

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = +2

Query: 47  GRXLPAAAAGIPFSSHSVTSAADADPTPSRSLPGHQVPSPPSRF*SKERSPTNH-GEAKG 223
           G  LP   A +  ++H   S      +PSR       P PP+ F +    P        G
Sbjct: 411 GSPLPHVGAALTVTTHPHISIKSEPVSPSRERS--PAPPPPAVFPAARPEPGEGLSSPAG 468

Query: 224 GRQATP*EEDGQARYGLLLPILQP 295
           G   T   +DG+  +G  L +L+P
Sbjct: 469 GSYETGDRDDGRGDFGPTLGLLRP 492

>PRDM1_MOUSE (Q60636) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1)
          Length = 856

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 273 FSCPFCNHGSSVECRIDMKNLI--GEA--NCQICQESFSTTANALT 398
           F C  CN G +    +    L+  GE    CQ+C + FS+T+N  T
Sbjct: 634 FKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKT 679

>PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1) (Positive regulatory
           domain I-binding factor 1) (PRDI-binding factor 1)
           (PRDI-BF1)
          Length = 789

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +3

Query: 273 FSCPFCNHGSSVECRIDMKNLI--GEA--NCQICQESFSTTANALT 398
           F C  CN G +    +    L+  GE    CQ+C + FS+T+N  T
Sbjct: 567 FKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKT 612

>MYOZ3_HUMAN (Q8TDC0) Myozenin-3 (Calsarcin-3) (FATZ-related protein 3)|
          Length = 251

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = +2

Query: 59  PAAAAGIPFSSHSVTSAADADPTPSRSLPGHQVP---SPPSRF 178
           P A+ G P  +H   + A   P+PS   PG+  P    PP +F
Sbjct: 113 PGASLGGPEGAHPAAAPAGCVPSPSALAPGYAEPLKGVPPEKF 155

>ATL5B_ARATH (Q9FLC6) Putative RING-H2 finger protein ATL5B precursor|
          Length = 176

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 264 DTVFSCPFCNHGSSVECRIDMKNLIGEANCQICQESF---STTANALTEAIDI 413
           +TV   P CNHG  V+C ID   L+  ++C  C++S     T AN      D+
Sbjct: 124 ETVRVLPKCNHGFHVKC-IDTW-LLSHSSCPTCRQSLLEHQTPANGSRRGDDV 174

>BXF_CLOBO (P30996) Botulinum neurotoxin type F precursor (EC 3.4.24.69)|
           (BoNT/F) (Bontoxilysin F) [Contains: Botulinum
           neurotoxin F light chain; Botulinum neurotoxin F heavy
           chain]
          Length = 1274

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 458 FDSVDALTLINPFAVYINSFSQRICSGAEAFLADLTISLTNQILH 324
           F S++ +T    +    N  S    S  E+F+AD  ISL ++++H
Sbjct: 187 FGSINIVTFSPEYEYTFNDISGGHNSSTESFIADPAISLAHELIH 231

>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 20/47 (42%), Positives = 24/47 (51%)
 Frame = +2

Query: 131 SRSLPGHQVPSPPSRF*SKERSPTNHGEAKGGRQATP*EEDGQARYG 271
           SRS  G + PSP  R  S  RSP    E+ GGR A     + +AR G
Sbjct: 821 SRSPSGSRSPSPRRRRDSPSRSPVRDRES-GGRAAAAAPGNSEARRG 866


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,000,145
Number of Sequences: 219361
Number of extensions: 1406396
Number of successful extensions: 5242
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5237
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)