ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17g15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018083.1| Zea mays clone EL01N0552A10.c mRNA sequence 216 7e-53
2gb|AY109647.1| Zea mays CL5260_1 mRNA sequence 216 7e-53
3ref|NM_193086.2| Oryza sativa (japonica cultivar-group), mRNA 200 4e-48
4dbj|AK061633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
5dbj|AK120972.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
7dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
8dbj|AK120292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
10dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
11dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
13dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
14dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
15ref|NM_123971.1| Arabidopsis thaliana unknown protein AT5G46030 ... 46 0.14
16gb|BT006515.1| Arabidopsis thaliana At5g46030 gene, complete cds 46 0.14
17emb|BX833577.1|CNS0A1VS Arabidopsis thaliana Full-length cDNA Co... 46 0.14
18emb|BX830337.1|CNS0A1YT Arabidopsis thaliana Full-length cDNA Co... 46 0.14
19gb|AY085452.1| Arabidopsis thaliana clone 15222 mRNA, complete s... 46 0.14
20gb|BT002010.1| Arabidopsis thaliana putative protein (At5g46030)... 46 0.14
21ref|XM_482253.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.55
22ref|NM_001031221.1| Gallus gallus coiled-coil domain containing ... 44 0.55
23emb|AJ851457.1| Gallus gallus mRNA for hypothetical protein, clo... 44 0.55
24gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 2.2
25ref|NM_190377.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
26gb|AC097143.9| Rattus norvegicus 4 BAC CH230-185G5 (Children's H... 42 2.2
27gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.2
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
29dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
30dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
31ref|XM_470006.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
32gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.6
34gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 40 8.6
35emb|AL161715.24| Human DNA sequence from clone RP11-187L3 on chr... 40 8.6
36gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
37gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 40 8.6
38emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.6
39emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 8.6
40emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete ... 40 8.6
41emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4,... 40 8.6
42dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 8.6
43gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, comp... 40 8.6
44gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, comp... 40 8.6
45ref|NM_059593.3| Caenorhabditis elegans H06O01.2 (H06O01.2) mRNA... 40 8.6
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
48dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
49dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
51emb|BX834003.1|CNS0A1VY Arabidopsis thaliana Full-length cDNA Co... 40 8.6
52gb|AC069157.8| Homo sapiens BAC clone RP11-796M18 from 2, comple... 40 8.6
53dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
54gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.6
55gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones R... 40 8.6
56dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA ... 40 8.6
57dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
58dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
59dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
60emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chro... 40 8.6
61dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
62dbj|AK120142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
63dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
64dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
65dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
66dbj|AK102291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
67dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
68dbj|AK073156.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
69dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
70emb|Z92970.1|CEH06O01 Caenorhabditis elegans Fosmid H06O01, comp... 40 8.6
71gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
72gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.6
73emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on ch... 40 8.6
74emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085... 40 8.6
75gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, comple... 40 8.6
76emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on ch... 40 8.6
77dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6 
>gb|BT018083.1| Zea mays clone EL01N0552A10.c mRNA sequence
          Length = 875

 Score =  216 bits (109), Expect = 7e-53
 Identities = 220/257 (85%)
 Strand = Plus / Plus

                                                                       
Query: 203 aaccatggggaagcgaaaggcggccgccaagccaccccctaggaagaggatggacaagct 262
           ||||||||||||| ||||| | || || |||||||| |||| |||| |||||||||||||
Sbjct: 330 aaccatggggaagagaaagtcagctgctaagccacctcctaagaagcggatggacaagct 389

                                                                       
Query: 263 cgatacggtcttctcctgcccattctgcaaccacgggagcagcgttgaatgccggattga 322
            || || ||||| |||||||||||||||||||||||||| || ||||| ||||| |||||
Sbjct: 390 tgacactgtcttttcctgcccattctgcaaccacgggagtagtgttgagtgccgaattga 449

                                                                       
Query: 323 tatgaagaatctgattggtgaggctaattgtcaaatctgccaggaaagcttcagcaccac 382
            ||||||||||||||||| || ||   ||||  |||||| ||||||| ||||||||| ||
Sbjct: 450 catgaagaatctgattggcgaagcatcttgtagaatctgtcaggaaaacttcagcacaac 509

                                                                       
Query: 383 tgcaaatgcgctgactgaagctattgatatatacagcgaatggattgatgagtgtgagcg 442
           ||  ||||| || |||||  ||||||||||||| || |||||||||||||||||||||||
Sbjct: 510 tgttaatgcactcactgagcctattgatatatatagtgaatggattgatgagtgtgagcg 569

                            
Query: 443 cgtcaacactgtcgaag 459
            ||||||||||| ||||
Sbjct: 570 tgtcaacactgttgaag 586
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>gb|AY109647.1| Zea mays CL5260_1 mRNA sequence
          Length = 1314

 Score =  216 bits (109), Expect = 7e-53
 Identities = 220/257 (85%)
 Strand = Plus / Minus

                                                                        
Query: 203  aaccatggggaagcgaaaggcggccgccaagccaccccctaggaagaggatggacaagct 262
            ||||||||||||| ||||| | || || |||||||| |||| |||| |||||||||||||
Sbjct: 1063 aaccatggggaagagaaagtcagctgctaagccacctcctaagaagcggatggacaagct 1004

                                                                        
Query: 263  cgatacggtcttctcctgcccattctgcaaccacgggagcagcgttgaatgccggattga 322
             || || ||||| |||||||||||||||||||||||||| || ||||| ||||| |||||
Sbjct: 1003 tgacactgtcttttcctgcccattctgcaaccacgggagtagtgttgagtgccgaattga 944

                                                                        
Query: 323  tatgaagaatctgattggtgaggctaattgtcaaatctgccaggaaagcttcagcaccac 382
             ||||||||||||||||| || ||   ||||  |||||| ||||||| ||||||||| ||
Sbjct: 943  catgaagaatctgattggcgaagcatcttgtagaatctgtcaggaaaacttcagcacaac 884

                                                                        
Query: 383  tgcaaatgcgctgactgaagctattgatatatacagcgaatggattgatgagtgtgagcg 442
            ||  ||||| || |||||  ||||||||||||| || |||||||||||||||||||||||
Sbjct: 883  tgttaatgcactcactgagcctattgatatatatagtgaatggattgatgagtgtgagcg 824

                             
Query: 443  cgtcaacactgtcgaag 459
             ||||||||||| ||||
Sbjct: 823  tgtcaacactgttgaag 807
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>ref|NM_193086.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 728

 Score =  200 bits (101), Expect = 4e-48
 Identities = 212/249 (85%)
 Strand = Plus / Plus

                                                                       
Query: 231 aagccaccccctaggaagaggatggacaagctcgatacggtcttctcctgcccattctgc 290
           |||||||| |||| |||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 217 aagccaccacctaagaagaggatggacaagcttgatactgtattttcctgcccattctgc 276

                                                                       
Query: 291 aaccacgggagcagcgttgaatgccggattgatatgaagaatctgattggtgaggctaat 350
           || || || || || |||||||||||||||||||||||||| ||||| || ||||||   
Sbjct: 277 aatcatggcagtagtgttgaatgccggattgatatgaagaacctgatcggcgaggcttca 336

                                                                       
Query: 351 tgtcaaatctgccaggaaagcttcagcaccactgcaaatgcgctgactgaagctattgat 410
           |||   ||||| ||||||| ||||||||||||||  ||||| ||||||||| | || || 
Sbjct: 337 tgtaggatctgtcaggaaaacttcagcaccactgtcaatgcactgactgaaccaatcgac 396

                                                                       
Query: 411 atatacagcgaatggattgatgagtgtgagcgcgtcaacactgtcgaagatgatgatggt 470
           ||||| |||||||||||||||||||| ||||| ||||||| ||||||||| || || || 
Sbjct: 397 atatatagcgaatggattgatgagtgcgagcgtgtcaacaatgtcgaagacgacgacgga 456

                    
Query: 471 gcatgagca 479
           |||||||||
Sbjct: 457 gcatgagca 465
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>dbj|AK061633.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A04, full
           insert sequence
          Length = 728

 Score =  200 bits (101), Expect = 4e-48
 Identities = 212/249 (85%)
 Strand = Plus / Plus

                                                                       
Query: 231 aagccaccccctaggaagaggatggacaagctcgatacggtcttctcctgcccattctgc 290
           |||||||| |||| |||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 217 aagccaccacctaagaagaggatggacaagcttgatactgtattttcctgcccattctgc 276

                                                                       
Query: 291 aaccacgggagcagcgttgaatgccggattgatatgaagaatctgattggtgaggctaat 350
           || || || || || |||||||||||||||||||||||||| ||||| || ||||||   
Sbjct: 277 aatcatggcagtagtgttgaatgccggattgatatgaagaacctgatcggcgaggcttca 336

                                                                       
Query: 351 tgtcaaatctgccaggaaagcttcagcaccactgcaaatgcgctgactgaagctattgat 410
           |||   ||||| ||||||| ||||||||||||||  ||||| ||||||||| | || || 
Sbjct: 337 tgtaggatctgtcaggaaaacttcagcaccactgtcaatgcactgactgaaccaatcgac 396

                                                                       
Query: 411 atatacagcgaatggattgatgagtgtgagcgcgtcaacactgtcgaagatgatgatggt 470
           ||||| |||||||||||||||||||| ||||| ||||||| ||||||||| || || || 
Sbjct: 397 atatatagcgaatggattgatgagtgcgagcgtgtcaacaatgtcgaagacgacgacgga 456

                    
Query: 471 gcatgagca 479
           |||||||||
Sbjct: 457 gcatgagca 465
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>dbj|AK120972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041G12, full
           insert sequence
          Length = 770

 Score =  184 bits (93), Expect = 2e-43
 Identities = 210/249 (84%)
 Strand = Plus / Plus

                                                                       
Query: 231 aagccaccccctaggaagaggatggacaagctcgatacggtcttctcctgcccattctgc 290
           |||||||| |||| |||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 222 aagccaccacctaagaagaggatggacaagcttgatactgtattttcctgcccattctgc 281

                                                                       
Query: 291 aaccacgggagcagcgttgaatgccggattgatatgaagaatctgattggtgaggctaat 350
            | || || || || |||||||||||||||||||||||||| ||||| || ||||||   
Sbjct: 282 gatcatggcagtagtgttgaatgccggattgatatgaagaacctgatcggcgaggcttca 341

                                                                       
Query: 351 tgtcaaatctgccaggaaagcttcagcaccactgcaaatgcgctgactgaagctattgat 410
           |||   ||||| ||||||| ||||||||||||||  ||||| ||||||||| | || || 
Sbjct: 342 tgtaggatctgtcaggaaaacttcagcaccactgtcaatgcactgactgaaccaatcgac 401

                                                                       
Query: 411 atatacagcgaatggattgatgagtgtgagcgcgtcaacactgtcgaagatgatgatggt 470
           ||||| |||||||||||||||||||| ||||| ||||||| ||||| ||| || || || 
Sbjct: 402 atatatagcgaatggattgatgagtgcgagcgtgtcaacaatgtcggagacgacgacgga 461

                    
Query: 471 gcatgagca 479
           |||||||||
Sbjct: 462 gcatgagca 470
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                            
Query: 231      aagccaccccctaggaagaggatggacaagctcgatacggtcttctcctgcccattctgc 290
                |||||||| |||| |||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 26117584 aagccaccacctaagaagaggatggacaagcttgatactgtattttcctgcccattctgc 26117643

                                             
Query: 291      aaccacgggagcagcgttgaatgccggat 319
                || || || || || ||||||||||||||
Sbjct: 26117644 aatcatggcagtagtgttgaatgccggat 26117672



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 417      agcgaatggattgatgagtgtgagcgcgtcaacactgtcgaagatgatgatggtgcatga 476
                |||||||||||||||||||| ||||| ||||||| ||||||||| || || || ||||||
Sbjct: 26118514 agcgaatggattgatgagtgcgagcgtgtcaacaatgtcgaagacgacgacggagcatga 26118573

                   
Query: 477      gca 479
                |||
Sbjct: 26118574 gca 26118576



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 320      tgatatgaagaatctgattggtgaggctaattgtcaaatctgccaggaaagcttcagcac 379
                |||||||||||| ||||| || ||||||   |||   ||||| ||||||| |||||||||
Sbjct: 26117761 tgatatgaagaacctgatcggcgaggcttcatgtaggatctgtcaggaaaacttcagcac 26117820

                     
Query: 380      cactg 384
                |||||
Sbjct: 26117821 cactg 26117825
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0519E12
          Length = 152448

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                        
Query: 231  aagccaccccctaggaagaggatggacaagctcgatacggtcttctcctgcccattctgc 290
            |||||||| |||| |||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 9442 aagccaccacctaagaagaggatggacaagcttgatactgtattttcctgcccattctgc 9501

                                         
Query: 291  aaccacgggagcagcgttgaatgccggat 319
            || || || || || ||||||||||||||
Sbjct: 9502 aatcatggcagtagtgttgaatgccggat 9530



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 417   agcgaatggattgatgagtgtgagcgcgtcaacactgtcgaagatgatgatggtgcatga 476
             |||||||||||||||||||| ||||| ||||||| ||||||||| || || || ||||||
Sbjct: 10372 agcgaatggattgatgagtgcgagcgtgtcaacaatgtcgaagacgacgacggagcatga 10431

                
Query: 477   gca 479
             |||
Sbjct: 10432 gca 10434



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 320  tgatatgaagaatctgattggtgaggctaattgtcaaatctgccaggaaagcttcagcac 379
            |||||||||||| ||||| || ||||||   |||   ||||| ||||||| |||||||||
Sbjct: 9619 tgatatgaagaacctgatcggcgaggcttcatgtaggatctgtcaggaaaacttcagcac 9678

                 
Query: 380  cactg 384
            |||||
Sbjct: 9679 cactg 9683
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>dbj|AK120292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050K04, full
           insert sequence
          Length = 876

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 245 gaagaggatggacaagctcgatacggtcttctcctgcccattctgcaaccacgggagcag 304
           |||||| ||||||||||| ||||| ||||| | ||| ||||| ||||||||||| || ||
Sbjct: 140 gaagagaatggacaagcttgatactgtcttttgctgtccattttgcaaccacggaagtag 199

                              
Query: 305 cgttgaatgccggattgat 323
            ||||| || || ||||||
Sbjct: 200 tgttgagtgtcgcattgat 218



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 387 aatgcgctgactgaagctattgatatatacagcgaatggattgatgagtgtgagcgcgtc 446
           ||||| ||||||||| | || || ||||||||||||||||| || || || |||||||| 
Sbjct: 282 aatgctctgactgaacccatcgacatatacagcgaatggatcgacgaatgcgagcgcgtg 341

               
Query: 447 aaca 450
           ||||
Sbjct: 342 aaca 345
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                     
Query: 245     gaagaggatggacaagctcgatacggtcttctcctgcccattctgcaaccacgg 298
               |||||| ||||||||||| ||||| ||||| | ||| ||||| |||||||||||
Sbjct: 1818025 gaagagaatggacaagcttgatactgtcttttgctgtccattttgcaaccacgg 1817972



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 105      ccgccgccgacgccgacccc 124
                ||||||||||||||||||||
Sbjct: 27247585 ccgccgccgacgccgacccc 27247566



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 55      tctacccgccgccgccgccg 74
               ||||||||||||||||||||
Sbjct: 5251105 tctacccgccgccgccgccg 5251124
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G11
          Length = 143943

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 245    gaagaggatggacaagctcgatacggtcttctcctgcccattctgcaaccacgg 298
              |||||| ||||||||||| ||||| ||||| | ||| ||||| |||||||||||
Sbjct: 136037 gaagagaatggacaagcttgatactgtcttttgctgtccattttgcaaccacgg 135984
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                   
Query: 245   gaagaggatggacaagctcgatacggtcttctcctgcccattctgcaaccacgg 298
             |||||| ||||||||||| ||||| ||||| | ||| ||||| |||||||||||
Sbjct: 54669 gaagagaatggacaagcttgatactgtcttttgctgtccattttgcaaccacgg 54616
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 101      acctccgccgccgacgccgacccc 124
                ||||||||||||||||||||||||
Sbjct: 19031917 acctccgccgccgacgccgacccc 19031940
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>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1198_B10
          Length = 119768

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 101    acctccgccgccgacgccgacccc 124
              ||||||||||||||||||||||||
Sbjct: 116837 acctccgccgccgacgccgacccc 116860
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>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1051_A08
          Length = 137583

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 101   acctccgccgccgacgccgacccc 124
             ||||||||||||||||||||||||
Sbjct: 56704 acctccgccgccgacgccgacccc 56727
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>ref|NM_123971.1| Arabidopsis thaliana unknown protein AT5G46030 mRNA, complete cds
          Length = 686

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 394 tgactgaagctattgatatatacagcgaatggattgatgagtg 436
           ||||||||||||| || || || ||||||||||| ||||||||
Sbjct: 310 tgactgaagctatagacatttatagcgaatggatcgatgagtg 352



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 attgatatgaagaatctgattggt 341
           |||||||||||| |||||||||||
Sbjct: 234 attgatatgaagcatctgattggt 257
to top
>gb|BT006515.1| Arabidopsis thaliana At5g46030 gene, complete cds
          Length = 363

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 394 tgactgaagctattgatatatacagcgaatggattgatgagtg 436
           ||||||||||||| || || || ||||||||||| ||||||||
Sbjct: 188 tgactgaagctatagacatttatagcgaatggatcgatgagtg 230



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 attgatatgaagaatctgattggt 341
           |||||||||||| |||||||||||
Sbjct: 112 attgatatgaagcatctgattggt 135
to top
>emb|BX833577.1|CNS0A1VS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL63ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 654

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 394 tgactgaagctattgatatatacagcgaatggattgatgagtg 436
           ||||||||||||| || || || ||||||||||| ||||||||
Sbjct: 275 tgactgaagctatagacatttatagcgaatggatcgatgagtg 317



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 attgatatgaagaatctgattggt 341
           |||||||||||| |||||||||||
Sbjct: 199 attgatatgaagcatctgattggt 222
to top
>emb|BX830337.1|CNS0A1YT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZC10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 659

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 394 tgactgaagctattgatatatacagcgaatggattgatgagtg 436
           ||||||||||||| || || || ||||||||||| ||||||||
Sbjct: 280 tgactgaagctatagacatttatagcgaatggatcgatgagtg 322
to top
>gb|AY085452.1| Arabidopsis thaliana clone 15222 mRNA, complete sequence
          Length = 687

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 394 tgactgaagctattgatatatacagcgaatggattgatgagtg 436
           ||||||||||||| || || || ||||||||||| ||||||||
Sbjct: 310 tgactgaagctatagacatttatagcgaatggatcgatgagtg 352



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 attgatatgaagaatctgattggt 341
           |||||||||||| |||||||||||
Sbjct: 234 attgatatgaagcatctgattggt 257
to top
>gb|BT002010.1| Arabidopsis thaliana putative protein (At5g46030) mRNA, complete
           cds
          Length = 672

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 394 tgactgaagctattgatatatacagcgaatggattgatgagtg 436
           ||||||||||||| || || || ||||||||||| ||||||||
Sbjct: 294 tgactgaagctatagacatttatagcgaatggatcgatgagtg 336



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 attgatatgaagaatctgattggt 341
           |||||||||||| |||||||||||
Sbjct: 218 attgatatgaagcatctgattggt 241
to top
>ref|XM_482253.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 738

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 103 ctccgccgccgacgccgacccc 124
           ||||||||||||||||||||||
Sbjct: 266 ctccgccgccgacgccgacccc 245
to top
>ref|NM_001031221.1| Gallus gallus coiled-coil domain containing 6 (CCDC6), mRNA
          Length = 4004

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 244 ggaagaggatggacaagctcga 265
           ||||||||||||||||||||||
Sbjct: 728 ggaagaggatggacaagctcga 749
to top
>emb|AJ851457.1| Gallus gallus mRNA for hypothetical protein, clone 3i14
          Length = 4004

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 244 ggaagaggatggacaagctcga 265
           ||||||||||||||||||||||
Sbjct: 728 ggaagaggatggacaagctcga 749
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 100    gacctccgccgccgacgccga 120
              |||||||||||||||||||||
Sbjct: 920293 gacctccgccgccgacgccga 920273
to top
>ref|NM_190377.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 309

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 59 cccgccgccgccgccggnattcccttct 86
          |||||||||||||||||  |||||||||
Sbjct: 71 cccgccgccgccgccggccttcccttct 44
to top
>gb|AC097143.9| Rattus norvegicus 4 BAC CH230-185G5 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 83848

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 121   ccccaccccgtcccggtcttt 141
             |||||||||||||||||||||
Sbjct: 53604 ccccaccccgtcccggtcttt 53624
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 354     caaatctgccaggaaagcttc 374
               |||||||||||||||||||||
Sbjct: 1743298 caaatctgccaggaaagcttc 1743278
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 59       cccgccgccgccgccggnattcccttct 86
                |||||||||||||||||  |||||||||
Sbjct: 35132141 cccgccgccgccgccggccttcccttct 35132114



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      cctccgccgccgacgccgac 121
                ||||||||||||||||||||
Sbjct: 31996550 cctccgccgccgacgccgac 31996531
to top
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 59    cccgccgccgccgccggnattcccttct 86
             |||||||||||||||||  |||||||||
Sbjct: 11225 cccgccgccgccgccggccttcccttct 11198
to top
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485B12
          Length = 156047

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 59     cccgccgccgccgccggnattcccttct 86
              |||||||||||||||||  |||||||||
Sbjct: 139291 cccgccgccgccgccggccttcccttct 139264
to top
>ref|XM_470006.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 974 cctccgccgccgacgccgac 993
to top
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10,
              complete sequence
          Length = 158833

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 94     ctcggtgacctccgccgccgacgccgac 121
              ||||||| |||||||||||| |||||||
Sbjct: 148643 ctcggtggcctccgccgccgccgccgac 148670
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      cctccgccgccgacgccgac 121
                ||||||||||||||||||||
Sbjct: 33295609 cctccgccgccgacgccgac 33295590



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 60      ccgccgccgccgccggnattccc 82
               |||||||||||||||| ||||||
Sbjct: 9589789 ccgccgccgccgccggcattccc 9589767
to top
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cctccgccgccgacgccgac 121
             ||||||||||||||||||||
Sbjct: 52125 cctccgccgccgacgccgac 52106
to top
>emb|AL161715.24| Human DNA sequence from clone RP11-187L3 on chromosome 13 Contains the
             3' end of the CRYL1 gene for crystallin, lambda 1 and 4
             CpG islands, complete sequence
          Length = 88079

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    attcccttctccagccactc 96
             ||||||||||||||||||||
Sbjct: 29504 attcccttctccagccactc 29485
to top
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0056E15, complete sequence
          Length = 147941

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cctccgccgccgacgccgac 121
             ||||||||||||||||||||
Sbjct: 82870 cctccgccgccgacgccgac 82851
to top
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    ccgccgccgccgccggnattccc 82
             |||||||||||||||| ||||||
Sbjct: 10688 ccgccgccgccgccggcattccc 10666
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    tttgcccggccaccaggtcc 158
              ||||||||||||||||||||
Sbjct: 254369 tttgcccggccaccaggtcc 254388
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     ccttctccagccactcggtgacct 104
              |||| |||||||||||||||||||
Sbjct: 185777 ccttgtccagccactcggtgacct 185754
to top
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   ccgccgacgccgaccccacc 127
             ||||||||||||||||||||
Sbjct: 80948 ccgccgacgccgaccccacc 80967
to top
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06,
             complete sequence
          Length = 160129

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   ccgccgccgacgccgaccccaccc 128
             ||||||||||||||| ||||||||
Sbjct: 84310 ccgccgccgacgccgcccccaccc 84333
to top
>dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate
           aminotransferase, complete cds, clone: 22C4AG009
          Length = 1502

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 13  cctccgccgccgacgccgac 32
to top
>gb|AC010377.7| Homo sapiens chromosome 5 clone CTD-2060J20, complete sequence
          Length = 139476

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   tgtcatttactgccaccatt 536
             ||||||||||||||||||||
Sbjct: 81014 tgtcatttactgccaccatt 81033
to top
>gb|AC008966.9| Homo sapiens chromosome 5 clone CTD-2366F13, complete sequence
          Length = 174831

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   tgtcatttactgccaccatt 536
             ||||||||||||||||||||
Sbjct: 32025 tgtcatttactgccaccatt 32044
to top
>ref|NM_059593.3| Caenorhabditis elegans H06O01.2 (H06O01.2) mRNA, complete cds
          Length = 4749

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 452  tgtcgaagatgatgatggtg 471
            ||||||||||||||||||||
Sbjct: 2994 tgtcgaagatgatgatggtg 3013
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 105     ccgccgccgacgccgaccccaccc 128
               ||||||||||||||| ||||||||
Sbjct: 6663354 ccgccgccgacgccgcccccaccc 6663377
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     cctccgccgccgacgccgac 121
               ||||||||||||||||||||
Sbjct: 1188240 cctccgccgccgacgccgac 1188259
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 94       ctcggtgacctccgccgccgacgccgac 121
                ||||||| |||||||||||| |||||||
Sbjct: 18413278 ctcggtggcctccgccgccgccgccgac 18413305



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     cctccgccgccgacgccgac 121
               ||||||||||||||||||||
Sbjct: 1307745 cctccgccgccgacgccgac 1307764
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 54      atctacccgccgccgccgcc 73
               ||||||||||||||||||||
Sbjct: 5049163 atctacccgccgccgccgcc 5049182
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      cctccgccgccgacgccgac 121
                ||||||||||||||||||||
Sbjct: 33386119 cctccgccgccgacgccgac 33386100



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 60      ccgccgccgccgccggnattccc 82
               |||||||||||||||| ||||||
Sbjct: 9587910 ccgccgccgccgccggcattccc 9587888
to top
>emb|BX834003.1|CNS0A1VY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL8ZD11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 318 attgatatgaagaatctgattggt 341
           |||||||||||| |||||||||||
Sbjct: 179 attgatatgaagcatctgattggt 202
to top
>gb|AC069157.8| Homo sapiens BAC clone RP11-796M18 from 2, complete sequence
          Length = 138029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   ttctcctgcccattctgcaaccac 296
             |||||||||||||||||| |||||
Sbjct: 52219 ttctcctgcccattctgccaccac 52196
to top
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cctccgccgccgacgccgac 121
             ||||||||||||||||||||
Sbjct: 38364 cctccgccgccgacgccgac 38345
to top
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009C19, from chromosome 3, complete sequence
          Length = 131709

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 60    ccgccgccgccgccggnattccc 82
             |||||||||||||||| ||||||
Sbjct: 22897 ccgccgccgccgccggcattccc 22919
to top
>gb|AF250324.1|AF250324 Homo sapiens chromosome 4q35 BAC clones RPCI-11-463J17 and
              RPCI-6-92G13RCB2, complete sequence
          Length = 245708

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 328    agaatctgattggtgaggctaatt 351
              ||||||||||||||||||| ||||
Sbjct: 119038 agaatctgattggtgaggccaatt 119061
to top
>dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA for aspartate
           aminotransferase, complete cds
          Length = 1514

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 25  cctccgccgccgacgccgac 44
to top
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1725_H08
          Length = 155431

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ccgccgccgacgccgacccc 124
              ||||||||||||||||||||
Sbjct: 144034 ccgccgccgacgccgacccc 144015
to top
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   ccgccgccgacgccgacccc 124
             ||||||||||||||||||||
Sbjct: 98256 ccgccgccgacgccgacccc 98237
to top
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1008E06
          Length = 170228

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    atctacccgccgccgccgcc 73
             ||||||||||||||||||||
Sbjct: 51280 atctacccgccgccgccgcc 51299
to top
>emb|AL928974.12| Mouse DNA sequence from clone RP23-56C2 on chromosome 2, complete
             sequence
          Length = 195442

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 514   tgatgtcatttactgccaccatta 537
             ||||||||||||||| ||||||||
Sbjct: 84292 tgatgtcatttactgtcaccatta 84315
to top
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0437H03
          Length = 170173

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     tctacccgccgccgccgccg 74
              ||||||||||||||||||||
Sbjct: 144558 tctacccgccgccgccgccg 144577
to top
>dbj|AK120142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028E05, full
           insert sequence
          Length = 2631

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 94  ctcggtgacctccgccgccgacgccgac 121
           ||||||| |||||||||||| |||||||
Sbjct: 102 ctcggtggcctccgccgccgccgccgac 75
to top
>dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H04, full
           insert sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 30  cctccgccgccgacgccgac 49
to top
>dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B14, full
           insert sequence
          Length = 1888

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 399 cctccgccgccgacgccgac 418
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>dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D06, full
           insert sequence
          Length = 1525

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 36  cctccgccgccgacgccgac 55
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>dbj|AK102291.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089K18, full
           insert sequence
          Length = 2359

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 150 cctccgccgccgacgccgac 169
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>dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026J06, full
           insert sequence
          Length = 1626

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 136 cctccgccgccgacgccgac 155
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>dbj|AK073156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005P21, full
           insert sequence
          Length = 2467

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 200 cctccgccgccgacgccgac 219
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>dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112H20, full
           insert sequence
          Length = 1668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 cctccgccgccgacgccgac 121
           ||||||||||||||||||||
Sbjct: 179 cctccgccgccgacgccgac 198
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>emb|Z92970.1|CEH06O01 Caenorhabditis elegans Fosmid H06O01, complete sequence
          Length = 18029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  tgtcgaagatgatgatggtg 471
            ||||||||||||||||||||
Sbjct: 8818 tgtcgaagatgatgatggtg 8799
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 94       ctcggtgacctccgccgccgacgccgac 121
                ||||||| |||||||||||| |||||||
Sbjct: 18572679 ctcggtggcctccgccgccgccgccgac 18572706



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     cctccgccgccgacgccgac 121
               ||||||||||||||||||||
Sbjct: 1305466 cctccgccgccgacgccgac 1305485
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 102     cctccgccgccgacgccgac 121
               ||||||||||||||||||||
Sbjct: 1188240 cctccgccgccgacgccgac 1188259
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>emb|AL824711.14| Mouse DNA sequence from clone RP23-112I20 on chromosome X, complete
             sequence
          Length = 118199

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 461   tgatgatggtgcatgagcatgtgt 484
             |||||| |||||||||||||||||
Sbjct: 98433 tgatgacggtgcatgagcatgtgt 98456
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>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 121556

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    cctccgccgccgacgccgac 121
              ||||||||||||||||||||
Sbjct: 104542 cctccgccgccgacgccgac 104523
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>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence
          Length = 208906

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   tctcctgcccattctgcaac 293
             ||||||||||||||||||||
Sbjct: 99191 tctcctgcccattctgcaac 99210
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>emb|AL773526.11| Mouse DNA sequence from clone RP23-181M13 on chromosome X, complete
             sequence
          Length = 175563

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 461   tgatgatggtgcatgagcatgtgt 484
             |||||| |||||||||||||||||
Sbjct: 48528 tgatgacggtgcatgagcatgtgt 48505
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460E08
          Length = 170021

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   cctccgccgccgacgccgac 121
             ||||||||||||||||||||
Sbjct: 93277 cctccgccgccgacgccgac 93258


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,261,377
Number of Sequences: 3902068
Number of extensions: 5261377
Number of successful extensions: 277211
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 266666
Number of HSP's gapped (non-prelim): 10538
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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