ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd17g07 |
|---|---|
| Clone Library Name | barley_pub |
>MTNA_THEMA (Q9X013) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 343 Score = 70.1 bits (170), Expect = 4e-12 Identities = 43/140 (30%), Positives = 73/140 (52%) Frame = +1 Query: 124 ALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIGT 303 +L+LLDQRKLP E YV+ K + +AI++M+VRG + + D+ Sbjct: 14 SLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRDYK---- 69 Query: 304 PAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAETM 483 ++ + E L +RPTAVNL A +++ + A D +++F++ A M Sbjct: 70 TGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENA----DRENLFEILENEALKM 125 Query: 484 LVDDVADNKAIGLHGAEFLQ 543 +D+ NKAIG +GA+ ++ Sbjct: 126 AYEDIEVNKAIGKNGAQLIK 145
>YP18_YEAST (Q06489) Hypothetical 45.0 kDa protein in PIS1-CLB2 intergenic| region Length = 411 Score = 68.9 bits (167), Expect = 9e-12 Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 16/165 (9%) Frame = +1 Query: 94 ALQSILYGRG-----ALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXX 258 +L++I++ R ++++LDQ LP YV + DG++ I+ M VRG Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61 Query: 259 XXXXVEVN--DHNFIGTPAEAASFVS---------KKLEYLVSSRPTAVNLSDAATKLQN 405 EV HN A S V+ K+L++L+SSRPTAVNLS++ +++N Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121 Query: 406 LVSTTAETAKDAKSIFQVFIEAAETMLVDDVADNKAIGLHGAEFL 540 ++ ++++ S++ E ++ +D+A+N +G +GA++L Sbjct: 122 ILKSSSDLKAFDGSLYNYVCE----LIDEDLANNMKMGDNGAKYL 162
>MTNA_PSEAE (Q9HZ65) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 358 Score = 60.1 bits (144), Expect = 4e-09 Identities = 48/154 (31%), Positives = 73/154 (47%) Frame = +1 Query: 97 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 276 +++I + G LRLLDQR LP EEV+++ + +A+ AIRDMVVRG + Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIVLG 70 Query: 277 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 G AA + + L SRPTAVNL A ++++ + E K+ Sbjct: 71 ARARLAQGGDWRAA--LEEDFRLLADSRPTAVNLFWALNRMRDRL----ERMKEGDQPLA 124 Query: 457 VFIEAAETMLVDDVADNKAIGLHGAEFLQRQLGS 558 V A ++ D N + G E +++Q GS Sbjct: 125 VLEAEAISIHESDREANLTMAQLGMELIRKQQGS 158
>EI2B1_ARCFU (O29877) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 339 Score = 57.4 bits (137), Expect = 3e-08 Identities = 39/149 (26%), Positives = 72/149 (48%) Frame = +1 Query: 97 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 276 ++SI + G L+L+DQ KLP + ++ ++ + +AI+ + VRG + Sbjct: 1 MRSIFWDDG-LKLIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPALEAAGAYGIALA 59 Query: 277 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 + F E + K ++L S+RPTAVNL + N A + + + + Sbjct: 60 AREREFADVD-ELKEHLKKAADFLASTRPTAVNLFVGIERALN----AALKGESVEEVKE 114 Query: 457 VFIEAAETMLVDDVADNKAIGLHGAEFLQ 543 + + AE + +DV N+ +G +GAE L+ Sbjct: 115 LALREAEKLAEEDVERNRKMGEYGAELLE 143
>MTNA_XYLFA (Q9PAG5) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 354 Score = 56.2 bits (134), Expect = 6e-08 Identities = 41/148 (27%), Positives = 69/148 (46%) Frame = +1 Query: 97 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 276 ++ IL+ L+LLDQRKLP YV+ S D AIR ++VRG + Sbjct: 15 VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLA 74 Query: 277 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 + + EA + L+ L ++RPTAVNL+ +++ +S + Q Sbjct: 75 AREIEAV-DGIEALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWR------Q 127 Query: 457 VFIEAAETMLVDDVADNKAIGLHGAEFL 540 AE++ +D+ N+ +G +GA + Sbjct: 128 AMAREAESIAREDLTANRCMGAYGAALI 155
>MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 354 Score = 55.8 bits (133), Expect = 8e-08 Identities = 42/148 (28%), Positives = 70/148 (47%) Frame = +1 Query: 97 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 276 ++ IL+ L+LLDQRKLP YV+ S D AIR ++VRG + Sbjct: 15 VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLA 74 Query: 277 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 + + EA + L+ L ++RPTAVNL+ +++ +S + Q Sbjct: 75 AREIEAV-DGIEALCKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWR------Q 127 Query: 457 VFIEAAETMLVDDVADNKAIGLHGAEFL 540 V AE++ +D+ N+ +G +GA + Sbjct: 128 VMECEAESIAREDLTANRCMGAYGAALI 155
>MTNA_LEPIN (Q8F2A8) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 364 Score = 54.7 bits (130), Expect = 2e-07 Identities = 47/158 (29%), Positives = 71/158 (44%) Frame = +1 Query: 85 ESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXX 264 + S L+ IL+ L LLDQR LP Y+ K D AIR+MVVRG Sbjct: 2 QESGLKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFG 61 Query: 265 XXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAK 444 + N + + P + S + KL L+ SRPTAVNL A + + + ++ + Sbjct: 62 ITLYWN--SLVSKP--SFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLE 117 Query: 445 SIFQVFIEAAETMLVDDVADNKAIGLHGAEFLQRQLGS 558 I + E A ML +D+ +N + + +Q S Sbjct: 118 EIQKGAEELALFMLSEDLENNLTLSKYALSLFPKQPSS 155
>MTNA_LEPIC (Q72T46) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 364 Score = 54.7 bits (130), Expect = 2e-07 Identities = 47/158 (29%), Positives = 71/158 (44%) Frame = +1 Query: 85 ESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXX 264 + S L+ IL+ L LLDQR LP Y+ K D AIR+MVVRG Sbjct: 2 QESGLKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFG 61 Query: 265 XXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAK 444 + N + + P + S + KL L+ SRPTAVNL A + + + ++ + Sbjct: 62 ITLYWN--SLVSKP--SFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLE 117 Query: 445 SIFQVFIEAAETMLVDDVADNKAIGLHGAEFLQRQLGS 558 I + E A ML +D+ +N + + +Q S Sbjct: 118 EIQKGAEELALFMLSEDLENNLTLSKYALSLFPKQPSS 155
>EI2B1_METTH (O27900) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 311 Score = 54.3 bits (129), Expect = 2e-07 Identities = 45/149 (30%), Positives = 67/149 (44%) Frame = +1 Query: 97 LQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVE 276 +++I + G L L+DQRKLP Y +D D AI++MVVRG + Sbjct: 3 MKTIEWKDGELVLIDQRKLPDSLEYFRCRDYRDVIYAIKNMVVRGAPAIGVTAAFGVAMA 62 Query: 277 VNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 G E A+ E + +SRPTAVNL A ++ S Sbjct: 63 ----ELAGEDVEVAA------EEIKASRPTAVNLFWAVDRVMKSESP------------- 99 Query: 457 VFIEAAETMLVDDVADNKAIGLHGAEFLQ 543 ++ A TM ++D+ N+AIG HGA ++ Sbjct: 100 --LDEAITMYMEDMETNRAIGRHGAGLIE 126
>EI2B1_PYRFU (Q8U178) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 356 Score = 50.8 bits (120), Expect = 3e-06 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 3/150 (2%) Frame = +1 Query: 100 QSILYGRGALRLLDQRKLPLE---EVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXX 270 +S+ Y G + +++QR LP E E + V+ A+ AI++M VRG Sbjct: 15 RSVEYREGKVYMINQRLLPREFKVEEFTTVEAVAE---AIKNMTVRGAPAIGAAAAFGLA 71 Query: 271 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 450 + T E + E L ++RPTAVNL A +++ LV E + D I Sbjct: 72 LYAETSK-AKTKDEFFDGFYRAYETLKNTRPTAVNLFWALNRIKKLVEEHREDSLD--EI 128 Query: 451 FQVFIEAAETMLVDDVADNKAIGLHGAEFL 540 ++ +E A+ + +DV N +G +GAE L Sbjct: 129 KRLIVEEAQKIADEDVEANLRMGHYGAEVL 158
>YQJQ_CAEEL (Q93169) Hypothetical protein C01G10.9 in chromosome V| Length = 366 Score = 50.1 bits (118), Expect = 4e-06 Identities = 31/111 (27%), Positives = 57/111 (51%) Frame = +1 Query: 85 ESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXX 264 ES L S+ + L +LDQ LP E Y+ V+ +D + I+ M VRG Sbjct: 21 ESKRLDSLKFDGTNLEVLDQLLLPHEFKYIPVEGVSDAFAVIKSMQVRGAPLIAVVGSLG 80 Query: 265 XXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVST 417 +E+ + + + + + +K+ +L+SSRPTAV+L ++ L+ ++ + Sbjct: 81 LLLEIQKASELDSES-----IIQKINFLISSRPTAVDLRNSLNGLKPILES 126
>EI2B1_PYRHO (O58433) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 364 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 3/150 (2%) Frame = +1 Query: 100 QSILYGRGALRLLDQRKLPLE---EVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXX 270 +++ Y ++ +++QR LP E E + V++ A+ AI++M VRG Sbjct: 15 RTVEYKNKSVYMINQRLLPKEFKVEKFSKVEEVAE---AIKNMTVRGAPAIGAAAGFGLA 71 Query: 271 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 450 + T E K E L ++RPTAVNL A +++ LV +E D I Sbjct: 72 LYAETSK-AKTKEEFLDGFEKAYEILKNTRPTAVNLFWALNRIKKLVEEHSEDPLD--EI 128 Query: 451 FQVFIEAAETMLVDDVADNKAIGLHGAEFL 540 ++ ++ A + +DV N +G +GAE L Sbjct: 129 KRLIVQEAYKIADEDVEANLRMGHYGAEVL 158
>EI2B_AQUAE (O67879) Putative translation initiation factor eIF-2B (eIF-2B| GDP-GTP exchange factor) Length = 456 Score = 47.8 bits (112), Expect = 2e-05 Identities = 37/134 (27%), Positives = 60/134 (44%) Frame = +1 Query: 82 GESSALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXX 261 GE ++ + L LLDQRKLP +EV++++K + AI++M VRG Sbjct: 128 GEKMEVKPFYWKGDKLLLLDQRKLPHQEVWLELKTYEEVAKAIKEMAVRGAPAIGCTAA- 186 Query: 262 XXXVEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDA 441 + F+ K E L ++RPTA NL A ++ + + ++A Sbjct: 187 --------YGFVLGVKVQKEDPEKVYETLKNTRPTAYNLFWALDRMMKALKEGKDIEEEA 238 Query: 442 KSIFQVFIEAAETM 483 K I + EA + M Sbjct: 239 KEIEKEDYEANKRM 252
>MTNA_SYNY3 (P74497) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 351 Score = 47.0 bits (110), Expect = 4e-05 Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 4/143 (2%) Frame = +1 Query: 133 LLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIGTPAE 312 L+DQ +LPLE V + D +AI+ MVVRG + E Sbjct: 22 LIDQTRLPLEYKEVAIADYEAMGHAIKSMVVRGAPAIGVAAAYGMYLGARRIQ----TTE 77 Query: 313 AASFVSKKLEY----LVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAET 480 FV +LE+ L +RPTAVNL A ++ N+ + E + K+ + A+ Sbjct: 78 LREFV-VQLEFVADQLRQTRPTAVNLFWAIDQMLNVAYHSGENVEQIKA---NLLSQAQQ 133 Query: 481 MLVDDVADNKAIGLHGAEFLQRQ 549 + +DD+ +AIG G E L R+ Sbjct: 134 IQLDDLRTCQAIGAAGLEVLPRE 156
>MTNA_BACSU (O31662) Methylthioribose-1-phosphate isomerase (EC 5.3.1.23)| (MTR-1-P isomerase) Length = 353 Score = 46.6 bits (109), Expect = 5e-05 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 4/131 (3%) Frame = +1 Query: 100 QSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEV 279 +S+ + A+ +L+Q+KLP E Y+++ D ++AI + VRG + Sbjct: 9 RSVEWKETAITILNQQKLPDETEYLELTTKEDVFDAIVTLKVRGAPAIGITAAFGLALAA 68 Query: 280 NDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKL----QNLVSTTAETAKDAKS 447 D E + +YL SSRPTA+NLS A +L +N +S Sbjct: 69 KDIE-TDNVTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVENAISVNEAKTNLVHE 127 Query: 448 IFQVFIEAAET 480 Q+ +E ET Sbjct: 128 AIQIQVEDEET 138
>EI2B1_PYRAB (Q9UZ16) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 356 Score = 45.4 bits (106), Expect = 1e-04 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 3/150 (2%) Frame = +1 Query: 100 QSILYGRGALRLLDQRKLPLE---EVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXX 270 +S+ Y + +++QR LP E E + V+ A+ AI++M VRG Sbjct: 15 RSVEYKERTVYMINQRLLPREFKVEAFRTVESVAE---AIKNMTVRGAPAIGAAAAFGLA 71 Query: 271 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 450 + F K E L ++RPTAVNL A +++ LV E D I Sbjct: 72 LYAETSKAKSKDEFMDGFY-KAYETLKNTRPTAVNLFWALNRIKKLVEEHLEDPLD--EI 128 Query: 451 FQVFIEAAETMLVDDVADNKAIGLHGAEFL 540 + + A+ + +DV N +G +GAE L Sbjct: 129 KSLIVNEAQKIADEDVEANLRMGHYGAEVL 158
>EI2B1_AERPE (Q9YE84) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 370 Score = 45.1 bits (105), Expect = 1e-04 Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 2/146 (1%) Frame = +1 Query: 112 YGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHN 291 + G LD R +P EVY D AI DM +RG + + Sbjct: 28 FDEGVFVWLDTRLIPFREVYRRTSDYRRVARAIVDMEIRGAPAIGVAAAYALALAAAEAA 87 Query: 292 FIGTPA--EAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFI 465 G EA S +++E S+RPTA NL A ++ VS A + + + Sbjct: 88 SRGGEGFIEALSEARREIE---STRPTAYNLFWATARVYGAVS-EAFRRSGVDAAVRAGL 143 Query: 466 EAAETMLVDDVADNKAIGLHGAEFLQ 543 E A + V+DV N IG GA L+ Sbjct: 144 EEATRIYVEDVRGNVEIGRVGARLLE 169
>EI2B1_METJA (Q57896) Putative translation initiation factor eIF-2B subunit 1| (eIF-2B GDP-GTP exchange factor) Length = 329 Score = 44.7 bits (104), Expect = 2e-04 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 1/140 (0%) Frame = +1 Query: 127 LRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGX-XXXXXXXXXXXXVEVNDHNFIGT 303 L L+DQRKLP + Y K D AI+DMVVRG E+N + Sbjct: 17 LILIDQRKLPNKLEYFICKTYEDVAYAIKDMVVRGAPAIGVSAAYGLALAEINGDD---- 72 Query: 304 PAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAETM 483 + K E L ++RPTAVNL A + K+ KSI ++ A+ + Sbjct: 73 -------IYKAYEVLKNTRPTAVNLFWA-------LDRCLTAYKEGKSI----LDEAKKI 114 Query: 484 LVDDVADNKAIGLHGAEFLQ 543 +D+ K IG+ G + ++ Sbjct: 115 HEEDIETCKKIGMIGEKLIE 134
>MTNA_PSESM (Q885T7) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 358 Score = 44.7 bits (104), Expect = 2e-04 Identities = 39/145 (26%), Positives = 62/145 (42%) Frame = +1 Query: 124 ALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIGT 303 AL LLDQR LP EEV+ +A AIR MVVRG + I Sbjct: 20 ALYLLDQRVLPFEEVWHRYTTAAGVAEAIRTMVVRGAPAIGISAAYGAVLGARAR--IAE 77 Query: 304 PAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAETM 483 + + + ++ L SRPTAVNL A ++++ + K+ + A + Sbjct: 78 GGDWYPALEEDMQLLADSRPTAVNLFWALNRIRDRLM----RVKNGDNPLAALEAEAVAI 133 Query: 484 LVDDVADNKAIGLHGAEFLQRQLGS 558 + D N + GA+ +++ G+ Sbjct: 134 HLSDREANLTMAQLGADLIRKHQGN 158
>YPE3_RHORU (P23140) Hypothetical protein in petC 3'region (Fragment)| Length = 184 Score = 43.9 bits (102), Expect = 3e-04 Identities = 39/136 (28%), Positives = 67/136 (49%) Frame = +1 Query: 121 GALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVNDHNFIG 300 GA+ ++DQ +LP E V + D +AIR M+VRG + + + Sbjct: 18 GAVWIIDQTRLPHEFVTQRLNDLGAVAHAIRAMLVRGAPLIGATAAYGVALGMAE----- 72 Query: 301 TPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAET 480 P++ +++ + L+++RPTAVNL A ++ + + A D ++ Q A Sbjct: 73 DPSDEG--LTRACQTLLATRPTAVNLRWA---IEAMAESLAAVPPDQRA--QAAWAKAGA 125 Query: 481 MLVDDVADNKAIGLHG 528 + +DVA N+AIG HG Sbjct: 126 ICDEDVALNEAIGDHG 141
>MTNA_PSEPK (Q88M09) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 358 Score = 41.6 bits (96), Expect = 0.002 Identities = 39/152 (25%), Positives = 61/152 (40%) Frame = +1 Query: 103 SILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGXXXXXXXXXXXXXVEVN 282 +I + GAL LLDQR LP EE ++ + A AIRDM VRG + + Sbjct: 13 AIRWQGGALHLLDQRLLPSEERWLACDNVAQVAAAIRDMAVRGASAIGIAAAYGLVLALE 72 Query: 283 DHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVF 462 + G E + L +RPTA NL A +++ + + + + Sbjct: 73 ERLAEGGDWEMD--LEDDFLTLAEARPTAANLFWALNRMRERLL----CLRPEEDVLAAL 126 Query: 463 IEAAETMLVDDVADNKAIGLHGAEFLQRQLGS 558 A + D N + G E ++R G+ Sbjct: 127 EAEAVAIHDSDREANLTMAQQGIELIRRHQGN 158
>TALA_DICDI (P54633) Filopodin (Talin homolog)| Length = 2492 Score = 34.3 bits (77), Expect = 0.24 Identities = 23/80 (28%), Positives = 39/80 (48%) Frame = +1 Query: 301 TPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAET 480 T +A + + + SSR T +L A TK+ N VS+ +TAKD S+ A T Sbjct: 1977 TITQAKLLIVSSSQLVGSSRGTQEHLGSATTKVANTVSSLVKTAKDIASVL-----ADTT 2031 Query: 481 MLVDDVADNKAIGLHGAEFL 540 D ++ +KA+ + + + Sbjct: 2032 SQQDILSASKALSISSQQMV 2051
>PYR1_DICDI (P20054) Protein PYR1-3 [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2185 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/52 (28%), Positives = 29/52 (55%) Frame = +1 Query: 367 AVNLSDAATKLQNLVSTTAETAKDAKSIFQVFIEAAETMLVDDVADNKAIGL 522 A+N+ ++ L+ ++ A ++D + FI+ A+ + +D VADN I L Sbjct: 1075 AMNVVHSSQDLETFLTEAAAVSRDHPVVISKFIQEAKEIEIDAVADNGRIVL 1126
>DNAA_HAEDU (Q7VMW1) Chromosomal replication initiator protein dnaA| Length = 448 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 7/81 (8%) Frame = +1 Query: 292 FIGTPAEAASFVSK----KLEYLVSSRPTAVNLSDAATKLQNLVSTTA---ETAKDAKSI 450 F+ + A F+SK K+ V ++PT NLS ++T + L T +T + + Sbjct: 58 FLTEIIDLARFLSKNEQLKITIRVGNKPTEQNLSASSTNKEELTQDTVHKFKTGLNGRLT 117 Query: 451 FQVFIEAAETMLVDDVADNKA 513 F F++ L VA A Sbjct: 118 FDNFVQGKSNQLAKAVAQQVA 138
>CARB_LEPIN (Q8F832) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1106 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Frame = +1 Query: 295 IGTPAEAASFVSKKLEYLVSSRPT------AVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 I T E A ++ K+ Y V RP+ A+ + + +L + E +KD + Sbjct: 722 IATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELDRYMEKAEEISKDRPLLID 781 Query: 457 VFIEAAETMLVDDVADNKAIGLHG 528 F+E A + VD + D K + + G Sbjct: 782 SFLEDAIEVDVDALCDGKEVFVTG 805
>CARB_LEPIC (Q72NF1) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1106 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Frame = +1 Query: 295 IGTPAEAASFVSKKLEYLVSSRPT------AVNLSDAATKLQNLVSTTAETAKDAKSIFQ 456 I T E A ++ K+ Y V RP+ A+ + + +L + E +KD + Sbjct: 722 IATSMEEAREIAHKIGYPVLVRPSYVLGGRAMLIINEEKELDRYMEKAEEISKDRPLLID 781 Query: 457 VFIEAAETMLVDDVADNKAIGLHG 528 F+E A + VD + D K + + G Sbjct: 782 SFLEDAIEVDVDALCDGKEVFVTG 805
>URE3_YEREN (P31496) Urease gamma subunit (EC 3.5.1.5) (Urea amidohydrolase| gamma subunit) Length = 100 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 Query: 406 LVSTTAETAKDAKSIFQVFIEAAETMLVDDVADNKA 513 + T E A+D KS+ V EA++ + DDV D A Sbjct: 39 ITETAMEGARDGKSVEDVMKEASKVLTKDDVMDGVA 74 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.131 0.350 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,639,542 Number of Sequences: 219361 Number of extensions: 1060678 Number of successful extensions: 2187 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2165 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
