>RAP1_ARATH (Q39204) Transcription factor AtMYC2 (R-homologous Arabidopsis|
           protein 1) (RAP-1) (Basic helix-loop-helix protein 6)
           (bHLH6) (AtbHLH006) (rd22BP1)
          Length = 623

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
 Frame = +2

Query: 338 LQNKLQELIESEHPGAGWNYAIFWQLSRTKSGDLVLGWGDGSCREPNDAELAAAVSAG-- 511
           LQ +LQ LIE  H G  W YAIFWQ S   SG  VLGWGDG  +   D       S+   
Sbjct: 68  LQQRLQALIEGTHEG--WTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKANPRRRSSSPP 125

Query: 512 -NEDAKQRMRKRVLQRLHKAFGG 577
            +  A Q  RK+VL+ L+    G
Sbjct: 126 FSTPADQEYRKKVLRELNSLISG 148

>EGL1_ARATH (Q9CAD0) Transcription factor EGL1 (ENHANCER OF GLABRA3) (Basic|
           helix-loop-helix protein 2) (bHLH2) (AtbHLH002)
           (AtMyc-146)
          Length = 596

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 389 WNYAIFWQLSRTKSGDLVLGWGDG 460
           W+Y IFW +S ++ G  VL WGDG
Sbjct: 26  WSYGIFWSVSASQPG--VLEWGDG 47

>ERN2_MOUSE (Q9Z2E3) Serine/threonine-protein kinase/endoribonuclease IRE2|
           precursor (Inositol-requiring protein 2) (IRE1b)
           (Ire1-beta) (Endoplasmic reticulum-to-nucleus signaling
           2) (mIre1) [Includes: Serine/threonine-protein kinase
           (EC 2.7.11.1); Endori
          Length = 911

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +2

Query: 332 VDLQNKLQELIESEHPGAGWNYA--IFWQLSRTKSGDLVLGWGDGSCREPNDAELAAAVS 505
           +DL   +  L+  + P AGW  A  +FW  SR K         D   +EP+   L +A+ 
Sbjct: 742 LDLVRAMLSLLPQDRPSAGWVLAHPLFW--SRAKELQFFQDVSDWLEKEPDQGPLVSALE 799

Query: 506 AGN 514
           AG+
Sbjct: 800 AGS 802

>ARLC_MAIZE (P13526) Anthocyanin regulatory Lc protein|
          Length = 610

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 389 WNYAIFWQLSRTKSGDLVLGWGDG 460
           W+YA+FW +S T+ G  VL W DG
Sbjct: 37  WSYALFWSISDTQPG--VLTWTDG 58

>SUB2_DEIRA (Q9RYM8) Probable subtilase-type serine protease DRA0283 precursor|
           (EC 3.4.21.-)
          Length = 728

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -3

Query: 363 ISSCSLFCKSTGDDAAIRPSDMVPPPFVKY 274
           +SSC++ CKS GDDA+    D    PF KY
Sbjct: 693 VSSCNILCKSNGDDASKGQDD--DSPFNKY 720

>ARRS_MAIZE (P13027) Anthocyanin regulatory R-S protein|
          Length = 612

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 389 WNYAIFWQLSRTKSGDLVLGWGDG 460
           W+YA+FW +S T+ G  VL W DG
Sbjct: 37  WSYALFWSISDTQPG--VLTWTDG 58

>LTBP3_HUMAN (Q9NS15) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1302

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 15   SGPRAGKXPGFSPSRLRRQRSWAGCCRPCP 104
            +GP AG    F     R+ R W   CRPCP
Sbjct: 1148 AGPLAGPALTFDDCCCRQGRGWGAQCRPCP 1177

>MARH2_HUMAN (Q9P0N8) Membrane-associated RING finger protein 2|
           (Membrane-associated RING-CH protein II) (MARCH-II)
           (RING finger protein 172)
          Length = 246

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 289 PFCQVCKCISSKHSCAEGSILLSPCPTISSIGTV 188
           PFC++C      H  A G  LLSPC    ++G V
Sbjct: 62  PFCRIC------HEGANGECLLSPCGCTGTLGAV 89

>NOC3L_MOUSE (Q8VI84) Nucleolar complex protein 3 homolog (NOC3 protein homolog)|
           (NOC3-like protein) (Nucleolar complex-associated
           protein 3-like protein) (Factor for adipocyte
           differentiation 24)
          Length = 807

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 24/85 (28%), Positives = 38/85 (44%)
 Frame = +2

Query: 110 DFASPLPIRARDPRSGLMVMKMEVEEDXXXXXXXXXWTEEDRALSTTVLGRDAFAYLTKG 289
           D  S  PI   DP+S   V +ME EED           +ED       LG+ A ++LT+ 
Sbjct: 55  DAVSKKPIPLEDPKSKRPVKRMEREEDEEEEALPLDMMDEDDLQLMKDLGQKA-SFLTRD 113

Query: 290 GGTISEGLIAASSPVDLQNKLQELI 364
                   +++S PV ++ +  E +
Sbjct: 114 --------LSSSEPVHIKKRKHESV 130

>MARH2_MOUSE (Q99M02) Membrane-associated RING finger protein 2|
           (Membrane-associated RING-CH protein II) (MARCH-II)
          Length = 246

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 289 PFCQVCKCISSKHSCAEGSILLSPCPTISSIGTV 188
           PFC++C      H  A G  LLSPC    ++G V
Sbjct: 62  PFCRIC------HEGANGENLLSPCGCTGTLGAV 89

>TT8_ARATH (Q9FT81) TRANSPARENT TESTA 8 protein (Basic helix-loop-helix|
           protein 42) (bHLH42) (AtbHLH042)
          Length = 518

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 341 QNKLQELIESEHPGAGWNYAIFWQLSRTKSGDLVLGWGDG 460
           + +LQ L+++      W Y++FWQ    +    VL WG+G
Sbjct: 17  KKELQGLLKTAVQSVDWTYSVFWQFCPQQR---VLVWGNG 53

>FMT_BRAJA (Q89BP0) Methionyl-tRNA formyltransferase (EC 2.1.2.9)|
          Length = 311

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = +2

Query: 98  LPALDFASPL--PIRARDPRSGLMVMKMEVEEDXXXXXXXXXWTEEDRALSTTVLGRDAF 271
           LP    A+P+   I A D  SG+MVMKM+V  D            E  A++ T+   D  
Sbjct: 114 LPRWRGAAPINRAIMADDAESGVMVMKMDVGLDTGDVAMA-----ERLAITDTMTAADLH 168

Query: 272 AYLTKGGGTISEGLIAASSPVDLQNKLQ 355
             L++ G  +    +AA     LQ K Q
Sbjct: 169 DRLSRLGADLMVRAMAALDRGGLQLKKQ 196

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -3

Query: 516 SLPAETAAANSASLGSRQEPSPHPRTRSPDFVRESCQKMA*FQPAP 379
           S P       S SL  R+ PSP PR RSP   R S      + P+P
Sbjct: 556 SPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSP 601

>TSC10_NEUCR (Q7RZR2) 3-ketodihydrosphingosine reductase tsc-10 (EC 1.1.1.102)|
           (3-dehydrosphinganine reductase) (KDS reductase)
          Length = 969

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 257 QAQLC*GLDPPQSMPHHFLHWHRPPQPPSSLP 162
           QA +  GL  PQ+ PH   H H+PP  P   P
Sbjct: 682 QADMLQGLGQPQAHPHQ--HQHQPPVAPMGQP 711

>RUSC1_MOUSE (Q8BG26) RUN and SH3 domain-containing protein 1|
          Length = 893

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = -3

Query: 516 SLPAETAAANSASLGSRQEPSPHPRTRSPDFVRESCQKMA*FQPAPGCSDSISSCS 349
           ++P      + +S+ ++Q+PS      SP                PGCS S+SSCS
Sbjct: 68  AVPCRCCQEHGSSIENQQDPSQEEEAVSPS--------------DPGCSSSLSSCS 109

>XBP1_YEAST (P40489) Transcriptional repressor XBP1 (XhoI site-binding protein|
           1)
          Length = 647

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
 Frame = -3

Query: 522 ASSLPAETAAANSAS-------LGSRQEPSPHPRTRSPDFVRESCQKMA*FQPAPGCSDS 364
           A +  A TAAAN+++          RQ+P P PR RS        QK+      P     
Sbjct: 411 AGAATAATAAANTSTNFTSTAVARPRQKPRPRPRQRSTSMSHSKAQKLVIEDALPSFDSF 470

Query: 363 ISSCSL 346
           + +  L
Sbjct: 471 VENLGL 476

>NFRKB_HUMAN (Q6P4R8) Nuclear factor related to kappa-B-binding protein|
           (DNA-binding protein R kappa-B)
          Length = 1299

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = -3

Query: 498 AAANSASLGSRQEPSPHPRTRSPDFVRESCQKMA*FQPAPGCSDSISSCSL----FCKST 331
           AAA  A    +Q+P P  + +S    +ES  K+    P+     S+S  S+        T
Sbjct: 667 AAAAKARKALQQKPKPPSKVKSSS--KESSIKVLSSGPSEQSQMSLSDSSMPPTPVTPVT 724

Query: 330 GDDAAIRPSDMVPPPFVKYANASLPSTVVLRARSS 226
               A+ P+  + PP V   N S PSTV   A+SS
Sbjct: 725 PTTPAL-PAIPISPPPVSAVNKSGPSTVSEPAKSS 758

>TIP12_ORYSA (Q94CS9) Probable aquaporin TIP1.2 (Tonoplast intrinsic protein|
           1.2) (OsTIP1.2)
          Length = 252

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +2

Query: 266 AFAYLTKGGGTISEGLIAAS 325
           AF+ LT GGGT   GLIAAS
Sbjct: 43  AFSKLTDGGGTTPSGLIAAS 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,480,416
Number of Sequences: 219361
Number of extensions: 2053478
Number of successful extensions: 7065
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7034
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)