ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018968.1| Zea mays clone Contig370.F mRNA sequence 287 2e-74
2ref|XM_549857.1| Oryza sativa (japonica cultivar-group), mRNA 139 1e-29
3dbj|AK100813.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
5gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 129 1e-26
6gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 129 1e-26
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
8dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
9dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
10gb|AY112408.1| Zea mays CL4661_1 mRNA sequence 82 2e-12
11ref|NM_122256.2| Arabidopsis thaliana unknown protein AT5G23490 ... 46 0.13
12gb|AY072179.1| Arabidopsis thaliana At5g23490 mRNA sequence 46 0.13
13gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosom... 42 2.0
14gb|AC124460.5| Mus musculus BAC clone RP24-142P7 from chromosome... 42 2.0
15gb|AC112792.4| Mus musculus BAC clone RP23-192J17 from 18, compl... 42 2.0
16gb|AC007490.7| Homo sapiens chromosome 16 clone RP11-132F7, comp... 42 2.0
17gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence 42 2.0
18emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 i... 42 2.0
19emb|AL929325.7| Human DNA sequence from clone CTD-2194M22 on chr... 42 2.0
20emb|AL590092.6| Human DNA sequence from clone RP11-237C19 on chr... 42 2.0
21gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cance... 42 2.0
22gb|AC096633.2| Homo sapiens chromosome 1 clone RP11-47A17, compl... 42 2.0
23gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, compl... 42 2.0
24gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, compl... 42 2.0
25gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, ... 42 2.0
26dbj|AK084114.1| Mus musculus 12 days embryo spinal ganglion cDNA... 42 2.0
27gb|AC155727.6| Mus musculus 6 BAC RP24-194N1 (Roswell Park Cance... 42 2.0
28gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Canc... 42 2.0
29gb|AC095045.2| Homo sapiens BAC clone RP11-140M23 from 4, comple... 42 2.0
30gb|AC073516.4| Homo sapiens BAC clone RP11-147C20 from 2, comple... 42 2.0
31gb|AC026888.6|AC026888 Homo sapiens chromosome 14 clone CTD-2243... 42 2.0
32gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 42 2.0
33gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Canc... 42 2.0
34emb|AL683803.9| Mouse DNA sequence from clone RP23-448D15 on chr... 42 2.0
35emb|AL845171.5| Mouse DNA sequence from clone RP23-38N8 on chrom... 42 2.0
36dbj|AB050434.1| Macaca fascicularis brain cDNA, clone:QnpA-21965 42 2.0
37ref|NM_129148.1| Arabidopsis thaliana CPK25; ATP binding / calci... 40 8.0
38gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, com... 40 8.0
39gb|AE008457.1| Streptococcus pneumoniae R6 section 73 of 184 of ... 40 8.0
40gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, compl... 40 8.0
41gb|AC150887.4| Bos taurus BAC CH240-483B20 (Children's Hospital... 40 8.0
42gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, com... 40 8.0
43gb|AC138330.4| Mus musculus BAC clone RP23-19L20 from chromosome... 40 8.0
44gb|AC138260.7| Mus musculus chromosome 6, clone RP23-247I19, com... 40 8.0
45gb|AC147340.2| Pan troglodytes BAC clone CH251-17L10 from Y, com... 40 8.0
46gb|AC147137.2| Pan troglodytes BAC clone CH251-346F4 from Y, com... 40 8.0
47gb|AC147658.2| Pan troglodytes BAC clone CH251-408K8 from Y, com... 40 8.0
48gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, com... 40 8.0
49gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, comp... 40 8.0
50gb|AC055873.8| Homo sapiens chromosome 15, clone RP11-339F1, com... 40 8.0
51gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, co... 40 8.0
52gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, com... 40 8.0
53emb|CR956634.3| Pig DNA sequence from clone CH242-277I8 on chrom... 40 8.0
54gb|AC144381.2| Pan troglodytes BAC clone RP43-12C6 from Y, compl... 40 8.0
55gb|AC142306.1| Pan troglodytes BAC clone RP43-131E14 from Y, com... 40 8.0
56gb|DQ446601.1| Arabidopsis thaliana clone pENTR221-At2g35890 cal... 40 8.0
57emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 o... 40 8.0
58emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on ch... 40 8.0
59emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chr... 40 8.0
60emb|AL360087.13| Human DNA sequence from clone RP11-558G9 on chr... 40 8.0
61emb|AL355294.14| Human DNA sequence from clone RP11-379B8 on chr... 40 8.0
62emb|AL353660.11| Human DNA sequence from clone RP11-459P23 on ch... 40 8.0
63gb|AC110072.3| Homo sapiens BAC clone RP11-18C16 from 4, complet... 40 8.0
64gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.0
65gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Hu... 40 8.0
66gb|AC158602.6| Mus musculus 10 BAC RP23-136G23 (Roswell Park Can... 40 8.0
67gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Canc... 40 8.0
68gb|AC023274.2|AC023274 Homo sapiens clone RP11-307L15, complete ... 40 8.0
69gb|AC155935.2| Pan troglodytes BAC clone CH251-589G5 from chromo... 40 8.0
70gb|AC152420.2| Pan troglodytes BAC clone CH251-595G8 from chromo... 40 8.0
71gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, comple... 40 8.0
72gb|AC009232.3| Homo sapiens BAC clone RP11-352J11 from 2, comple... 40 8.0
73gb|AC096570.1| Homo sapiens BAC clone RP11-368O18 from 2, comple... 40 8.0
74gb|AC007562.4|AC007562 Homo sapiens BAC clone RP11-497C14 from Y... 40 8.0
75gb|AC138789.1| Homo sapiens BAC clone CTD-2593N8 from 7, complet... 40 8.0
76ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 8.0
77gb|AC079044.21| Mus musculus strain C57BL/6J chromosome 16 clone... 40 8.0
78dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.0
79gb|AC006222.1|AC006222 Homo sapiens, clone hRPK.12_A_1, complete... 40 8.0
80gb|AC087802.13| Mus musculus strain C57BL/6J chromosome 16 clone... 40 8.0
81gb|U12683.1|XLU12683 Xenopus laevis integrin alpha5 subunit mRNA... 40 8.0
82gb|U12646.1|XLU12646 Xenopus laevis integrin alpha5tr subunit tr... 40 8.0
83emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chro... 40 8.0
84emb|AL844572.8| Mouse DNA sequence from clone RP23-40C5 on chrom... 40 8.0
85emb|AL672091.4| Mouse DNA sequence from clone RP23-185L10 on chr... 40 8.0
86emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on ch... 40 8.0 
>gb|BT018968.1| Zea mays clone Contig370.F mRNA sequence
          Length = 1387

 Score =  287 bits (145), Expect = 2e-74
 Identities = 363/433 (83%), Gaps = 2/433 (0%)
 Strand = Plus / Minus

                                                                        
Query: 140  ctacttgaagaagatgcc-tttcttccttcctttgctcttctcaacagccttcattctaa 198
            |||||||||||||||||| ||||||  |||| ||||||||||||||||||||||| || |
Sbjct: 1117 ctacttgaagaagatgccctttcttt-ttcccttgctcttctcaacagccttcatcctga 1059

                                                                        
Query: 199  agagccgcagaatcagcacgatgctatcccgtgacggggagttttctccaggcttgagat 258
            | ||||  || || || || |||  ||| ||||| ||||  || ||| ||||||| | ||
Sbjct: 1058 atagccttagtattagaacaatggcatctcgtgatggggcattctctgcaggctttaaat 999

                                                                        
Query: 259  tgtactcggcaccgtcagcagactggatcgaaaactcggtaggatgcccataagggatat 318
            ||||||| ||||| |||||||||   || |||||||| |||||| ||||| | |||||||
Sbjct: 998  tgtactcagcaccatcagcagacaaaattgaaaactcagtaggacgcccaaatgggatat 939

                                                                        
Query: 319  tgatggctgtagcttgctggaacttctctgtgataacgacaccacgctgtccattacact 378
            ||||||   | |||||||| || |||||  ||| ||||||||| ||||||||||||||||
Sbjct: 938  tgatggtcatcgcttgctgaaatttctccatgacaacgacaccgcgctgtccattacact 879

                                                                        
Query: 379  tgatgctgtagccttccctctttatggccaataccgcaggttcccacatatctataaatc 438
            | | |||||| |||||||||||||| ||||| |  || |||||||||||||||| |||||
Sbjct: 878  taacgctgtaaccttccctctttattgccaaaatagctggttcccacatatctaaaaatc 819

                                                                        
Query: 439  taacaggtagtagaacttcatacgacacatgcccaacggaaagaattttcttgatgagct 498
            ||||||||| |||||||||||| || |||||||| |  || ||||||||||| ||  |||
Sbjct: 818  taacaggtaatagaacttcataagagacatgccccagagagagaattttcttaatatgct 759

                                                                        
Query: 499  ccttcatttctggatcacatgtaatttttctctgctcattagcataaaccttcacaatct 558
            ||||  |||| || ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 758  ccttggtttcagggtcacatgtaatttttctttgatcattagcataaaccttcacaatct 699

                         
Query: 559  ccccctttctttt 571
            | ||||| |||||
Sbjct: 698  cgcccttcctttt 686
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>ref|XM_549857.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2583

 Score =  139 bits (70), Expect = 1e-29
 Identities = 199/242 (82%)
 Strand = Plus / Minus

                                                                        
Query: 330  gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
            |||||||| || |||||||||| ||| ||||||||||| ||| |||| || || ||||||
Sbjct: 2149 gcttgctgaaatttctctgtgagaacaacaccacgctgaccagtacatttaatactgtag 2090

                                                                        
Query: 390  ccttccctctttatggccaataccgcaggttcccacatatctataaatctaacaggtagt 449
            |||||||||||||| ||||| |  || |||||||||||||||| |||| | |||||||||
Sbjct: 2089 ccttccctctttattgccaaaatagctggttcccacatatctaaaaatttcacaggtagt 2030

                                                                        
Query: 450  agaacttcatacgacacatgcccaacggaaagaattttcttgatgagctccttcatttct 509
             | |||||||| || ||||| |||     |||| || |||| || ||||||||  |||| 
Sbjct: 2029 tggacttcataagatacatgaccagtttcaagagttctcttaataagctcctttgtttca 1970

                                                                        
Query: 510  ggatcacatgtaatttttctctgctcattagcataaaccttcacaatctccccctttctt 569
            ||||| || ||||||||||| || |||||||| |||| | | ||||| ||||||||||||
Sbjct: 1969 ggatcgcaagtaatttttctttgatcattagcgtaaaaccttacaatttccccctttctt 1910

              
Query: 570  tt 571
            ||
Sbjct: 1909 tt 1908



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 140  ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcc 188
            |||||||||||| | ||  ||||| |||||| | |||||||||||||||
Sbjct: 2339 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcc 2291
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>dbj|AK100813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121P16, full
            insert sequence
          Length = 2583

 Score =  139 bits (70), Expect = 1e-29
 Identities = 199/242 (82%)
 Strand = Plus / Minus

                                                                        
Query: 330  gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
            |||||||| || |||||||||| ||| ||||||||||| ||| |||| || || ||||||
Sbjct: 2149 gcttgctgaaatttctctgtgagaacaacaccacgctgaccagtacatttaatactgtag 2090

                                                                        
Query: 390  ccttccctctttatggccaataccgcaggttcccacatatctataaatctaacaggtagt 449
            |||||||||||||| ||||| |  || |||||||||||||||| |||| | |||||||||
Sbjct: 2089 ccttccctctttattgccaaaatagctggttcccacatatctaaaaatttcacaggtagt 2030

                                                                        
Query: 450  agaacttcatacgacacatgcccaacggaaagaattttcttgatgagctccttcatttct 509
             | |||||||| || ||||| |||     |||| || |||| || ||||||||  |||| 
Sbjct: 2029 tggacttcataagatacatgaccagtttcaagagttctcttaataagctcctttgtttca 1970

                                                                        
Query: 510  ggatcacatgtaatttttctctgctcattagcataaaccttcacaatctccccctttctt 569
            ||||| || ||||||||||| || |||||||| |||| | | ||||| ||||||||||||
Sbjct: 1969 ggatcgcaagtaatttttctttgatcattagcgtaaaaccttacaatttccccctttctt 1910

              
Query: 570  tt 571
            ||
Sbjct: 1909 tt 1908



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 140  ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcc 188
            |||||||||||| | ||  ||||| |||||| | |||||||||||||||
Sbjct: 2339 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcc 2291
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                         
Query: 330   gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
             ||||||||||| || ||||| ||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 46497 gcttgctggaatttttctgtaataacaacaccacgctggccattacacttaatgctgtaa 46556

                                                                  
Query: 390   ccttccctctttatggccaataccgcaggttcccacatatctataaatctaac 442
             |||||||||||||| |||||||| || |||||||||||||||| ||| |||||
Sbjct: 46557 ccttccctctttattgccaatacagctggttcccacatatctagaaacctaac 46609



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 441   acaggtagtagaacttcatacgacacatgcccaacggaaagaattttcttgatgagctcc 500
             ||||| || ||||||||||| || ||||||||||  ||||||||||||||||||||||||
Sbjct: 46700 acaggcagcagaacttcataggatacatgcccaattgaaagaattttcttgatgagctcc 46759

               
Query: 501   tt 502
             ||
Sbjct: 46760 tt 46761



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 247   caggcttgagattgtactcggcaccgtcagcagactggatcgaaaactcggtaggatgcc 306
             |||||||||||||||| || ||||| ||||||| |   || ||||| || |||||| |||
Sbjct: 45743 caggcttgagattgtattcagcaccatcagcagccaatatagaaaattcagtaggacgcc 45802

                             
Query: 307   cataagggatattgat 322
             |||| |||||||||||
Sbjct: 45803 catatgggatattgat 45818



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 139   tctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
             ||||||||||||| ||||| ||| | |||||||| ||||||||||| ||||
Sbjct: 44158 tctacttgaagaatatgcccttccttcttcctttactcttctcaactgcct 44208



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 562   cctttcttttccggtcatctagag 585
             ||||||||||||||||||||||||
Sbjct: 47566 cctttcttttccggtcatctagag 47589



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 534   tcattagcataaaccttcacaatctccccct 564
             ||||| |||||||||||||| ||||||||||
Sbjct: 47058 tcattggcataaaccttcacgatctccccct 47088
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                         
Query: 330   gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
             ||||||||||| || ||||| ||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 46497 gcttgctggaatttttctgtaataacaacaccacgctggccattacacttaatgctgtaa 46556

                                                                  
Query: 390   ccttccctctttatggccaataccgcaggttcccacatatctataaatctaac 442
             |||||||||||||| |||||||| || |||||||||||||||| ||| |||||
Sbjct: 46557 ccttccctctttattgccaatacagctggttcccacatatctagaaacctaac 46609



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 441   acaggtagtagaacttcatacgacacatgcccaacggaaagaattttcttgatgagctcc 500
             ||||| || ||||||||||| || ||||||||||  ||||||||||||||||||||||||
Sbjct: 46700 acaggcagcagaacttcataggatacatgcccaattgaaagaattttcttgatgagctcc 46759

               
Query: 501   tt 502
             ||
Sbjct: 46760 tt 46761



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 247   caggcttgagattgtactcggcaccgtcagcagactggatcgaaaactcggtaggatgcc 306
             |||||||||||||||| || ||||| ||||||| |   || ||||| || |||||| |||
Sbjct: 45743 caggcttgagattgtattcagcaccatcagcagccaatatagaaaattcagtaggacgcc 45802

                             
Query: 307   cataagggatattgat 322
             |||| |||||||||||
Sbjct: 45803 catatgggatattgat 45818



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 139   tctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
             ||||||||||||| ||||| ||| | |||||||| ||||||||||| ||||
Sbjct: 44158 tctacttgaagaatatgcccttccttcttcctttactcttctcaactgcct 44208



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 562   cctttcttttccggtcatctagag 585
             ||||||||||||||||||||||||
Sbjct: 47566 cctttcttttccggtcatctagag 47589



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 534   tcattagcataaaccttcacaatctccccct 564
             ||||| |||||||||||||| ||||||||||
Sbjct: 47058 tcattggcataaaccttcacgatctccccct 47088
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>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score =  129 bits (65), Expect = 1e-26
 Identities = 101/113 (89%)
 Strand = Plus / Plus

                                                                         
Query: 330   gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
             ||||||||||| || ||||| ||||| ||||||||||| ||||||||||| |||||||| 
Sbjct: 55884 gcttgctggaatttttctgtaataacaacaccacgctggccattacacttaatgctgtaa 55943

                                                                  
Query: 390   ccttccctctttatggccaataccgcaggttcccacatatctataaatctaac 442
             |||||||||||||| |||||||| || |||||||||||||||| ||| |||||
Sbjct: 55944 ccttccctctttattgccaatacagctggttcccacatatctagaaacctaac 55996



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 441   acaggtagtagaacttcatacgacacatgcccaacggaaagaattttcttgatgagctcc 500
             ||||| || ||||||||||| || ||||||||||  ||||||||||||||||||||||||
Sbjct: 56087 acaggcagcagaacttcataggatacatgcccaattgaaagaattttcttgatgagctcc 56146

               
Query: 501   tt 502
             ||
Sbjct: 56147 tt 56148



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                         
Query: 247   caggcttgagattgtactcggcaccgtcagcagactggatcgaaaactcggtaggatgcc 306
             |||||||||||||||| || ||||| ||||||| |   || ||||| || |||||| |||
Sbjct: 55130 caggcttgagattgtattcagcaccatcagcagccaatatagaaaattcagtaggacgcc 55189

                             
Query: 307   cataagggatattgat 322
             |||| |||||||||||
Sbjct: 55190 catatgggatattgat 55205



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 139   tctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
             ||||||||||||| ||||| ||| | |||||||| ||||||||||| ||||
Sbjct: 53545 tctacttgaagaatatgcccttccttcttcctttactcttctcaactgcct 53595



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 562   cctttcttttccggtcatctagag 585
             ||||||||||||||||||||||||
Sbjct: 56953 cctttcttttccggtcatctagag 56976



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 534   tcattagcataaaccttcacaatctccccct 564
             ||||| |||||||||||||| ||||||||||
Sbjct: 56445 tcattggcataaaccttcacgatctccccct 56475
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                          
Query: 330    gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
              |||||||| || |||||||||| ||| ||||||||||| ||| |||| || || ||||||
Sbjct: 427905 gcttgctgaaatttctctgtgagaacaacaccacgctgaccagtacatttaatactgtag 427846

                                                              
Query: 390    ccttccctctttatggccaataccgcaggttcccacatatctataaat 437
              |||||||||||||| ||||| |  || |||||||||||||||| ||||
Sbjct: 427845 ccttccctctttattgccaaaatagctggttcccacatatctaaaaat 427798



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 140    ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
              |||||||||||| | ||  ||||| |||||| | ||||||||||||||||
Sbjct: 448592 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcct 448543



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 140    ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
              |||||||||||| | ||  ||||| |||||| | ||||||||||||||||
Sbjct: 429973 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcct 429924
to top
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0005A05
          Length = 190834

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                          
Query: 330    gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
              |||||||| || |||||||||| ||| ||||||||||| ||| |||| || || ||||||
Sbjct: 179743 gcttgctgaaatttctctgtgagaacaacaccacgctgaccagtacatttaatactgtag 179684

                                                              
Query: 390    ccttccctctttatggccaataccgcaggttcccacatatctataaat 437
              |||||||||||||| ||||| |  || |||||||||||||||| ||||
Sbjct: 179683 ccttccctctttattgccaaaatagctggttcccacatatctaaaaat 179636



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 140    ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
              |||||||||||| | ||  ||||| |||||| | ||||||||||||||||
Sbjct: 181811 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcct 181762
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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 330   gcttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtag 389
             |||||||| || |||||||||| ||| ||||||||||| ||| |||| || || ||||||
Sbjct: 68106 gcttgctgaaatttctctgtgagaacaacaccacgctgaccagtacatttaatactgtag 68047

                                                             
Query: 390   ccttccctctttatggccaataccgcaggttcccacatatctataaat 437
             |||||||||||||| ||||| |  || |||||||||||||||| ||||
Sbjct: 68046 ccttccctctttattgccaaaatagctggttcccacatatctaaaaat 67999



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 140   ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
             |||||||||||| | ||  ||||| |||||| | ||||||||||||||||
Sbjct: 88793 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcct 88744



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 140   ctacttgaagaagatgcctttcttccttcctttgctcttctcaacagcct 189
             |||||||||||| | ||  ||||| |||||| | ||||||||||||||||
Sbjct: 70174 ctacttgaagaaaaggctcttctttcttcctctcctcttctcaacagcct 70125
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>gb|AY112408.1| Zea mays CL4661_1 mRNA sequence
          Length = 779

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                       
Query: 331 cttgctggaacttctctgtgataacgacaccacgctgtccattacacttgatgctgtagc 390
           ||||||| |||||||||||||| |  ||||||||||| |||||||| || |||||||| |
Sbjct: 406 cttgctgaaacttctctgtgattagaacaccacgctgcccattacatttaatgctgtaac 347

                        
Query: 391 cttccctctttat 403
           |||||||||||||
Sbjct: 346 cttccctctttat 334



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                       
Query: 453 acttcatacgacacatgcccaacggaaagaattttcttgatgagctccttcatttctgga 512
           |||||||| | ||||||||||| |  |||  || |||| || ||||||||  |||| |||
Sbjct: 275 acttcataggtcacatgcccaatgtcaagggttctcttaataagctcctttgtttcagga 216

                                                 
Query: 513 tcacatgtaatttttctctgctcattagcataaacctt 550
           ||||||| |||||| |||||| | ||||||||||||||
Sbjct: 215 tcacatgaaattttcctctgcccgttagcataaacctt 178
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>ref|NM_122256.2| Arabidopsis thaliana unknown protein AT5G23490 mRNA, complete cds
          Length = 2712

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 534  tcattagcataaaccttcacaatctccccctttcttttccggtcatc 580
            ||||| ||| |||||||||||| |||||||||||  |||| ||||||
Sbjct: 2180 tcattggcaaaaaccttcacaagctccccctttcggttcctgtcatc 2134



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  tacacttgatgctgtagccttccctctt 400
            |||||||||||||||| ||||| |||||
Sbjct: 2341 tacacttgatgctgtaaccttctctctt 2314
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>gb|AY072179.1| Arabidopsis thaliana At5g23490 mRNA sequence
          Length = 2789

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 534  tcattagcataaaccttcacaatctccccctttcttttccggtcatc 580
            ||||| ||| |||||||||||| |||||||||||  |||| ||||||
Sbjct: 2257 tcattggcaaaaaccttcacaagctccccctttcggttcctgtcatc 2211



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  tacacttgatgctgtagccttccctctt 400
            |||||||||||||||| ||||| |||||
Sbjct: 2418 tacacttgatgctgtaaccttctctctt 2391
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>gb|AC126553.4| Mus musculus BAC clone RP23-448L16 from chromosome 18, complete
             sequence
          Length = 184463

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   tttcttccttcctttgctctt 178
             |||||||||||||||||||||
Sbjct: 22616 tttcttccttcctttgctctt 22636
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>gb|AC124460.5| Mus musculus BAC clone RP24-142P7 from chromosome 13, complete sequence
          Length = 184155

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    tttcttccttcctttgctctt 178
              |||||||||||||||||||||
Sbjct: 143358 tttcttccttcctttgctctt 143378



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    cctttcttccttcctttgct 175
              ||||||||||||||||||||
Sbjct: 172861 cctttcttccttcctttgct 172842
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>gb|AC112792.4| Mus musculus BAC clone RP23-192J17 from 18, complete sequence
          Length = 219784

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   tttcttccttcctttgctctt 178
             |||||||||||||||||||||
Sbjct: 43116 tttcttccttcctttgctctt 43096
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>gb|AC007490.7| Homo sapiens chromosome 16 clone RP11-132F7, complete sequence
          Length = 169207

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 145    tgaagaagatgcctttcttccttcc 169
              ||||||||||||||| |||||||||
Sbjct: 147944 tgaagaagatgccttgcttccttcc 147920
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>gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence
          Length = 163604

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     cacggccaaataaataaatac 98
              |||||||||||||||||||||
Sbjct: 138165 cacggccaaataaataaatac 138145
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>emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 in linkage group 2,
             complete sequence
          Length = 180976

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   cttcctttgctcttctcaaca 185
             |||||||||||||||||||||
Sbjct: 56957 cttcctttgctcttctcaaca 56937
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>emb|AL929325.7| Human DNA sequence from clone CTD-2194M22 on chromosome X, complete
             sequence
          Length = 176541

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   tgaagaagatgcctttcttcc 165
             |||||||||||||||||||||
Sbjct: 70160 tgaagaagatgcctttcttcc 70140
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>emb|AL590092.6| Human DNA sequence from clone RP11-237C19 on chromosome 1, complete
             sequence
          Length = 109470

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   tgaagaagatgcctttcttcc 165
             |||||||||||||||||||||
Sbjct: 83135 tgaagaagatgcctttcttcc 83115
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>gb|AC162038.6| Mus musculus 6 BAC RP24-576J4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 175787

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 160   tcttccttcctttgctcttct 180
             |||||||||||||||||||||
Sbjct: 87908 tcttccttcctttgctcttct 87888
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>gb|AC096633.2| Homo sapiens chromosome 1 clone RP11-47A17, complete sequence
          Length = 178152

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 103    ctacaagcaagcaaacaacac 123
              |||||||||||||||||||||
Sbjct: 169211 ctacaagcaagcaaacaacac 169231
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>gb|AC105269.2| Homo sapiens chromosome 1 clone RP4-788P17, complete sequence
          Length = 120910

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 145  tgaagaagatgcctttcttcc 165
            |||||||||||||||||||||
Sbjct: 9587 tgaagaagatgcctttcttcc 9567
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>gb|AC091615.3| Homo sapiens chromosome 1 clone RP5-840P12, complete sequence
          Length = 84326

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 145   tgaagaagatgcctttcttcc 165
             |||||||||||||||||||||
Sbjct: 38768 tgaagaagatgcctttcttcc 38788
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>gb|AC008791.5| Homo sapiens chromosome 5 clone CITB-H1_2040J22, complete sequence
          Length = 128182

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 145    tgaagaagatgcctttcttcc 165
              |||||||||||||||||||||
Sbjct: 110942 tgaagaagatgcctttcttcc 110922
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>dbj|AK084114.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130095L24
            product:unclassifiable, full insert sequence
          Length = 3769

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 102  gctacaagcaagcaaacaaca 122
            |||||||||||||||||||||
Sbjct: 1376 gctacaagcaagcaaacaaca 1396
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>gb|AC155727.6| Mus musculus 6 BAC RP24-194N1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 199400

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   gctacaagcaagcaaacaaca 122
             |||||||||||||||||||||
Sbjct: 92491 gctacaagcaagcaaacaaca 92511
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>gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 196625

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    gctacaagcaagcaaacaaca 122
              |||||||||||||||||||||
Sbjct: 176917 gctacaagcaagcaaacaaca 176897
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>gb|AC095045.2| Homo sapiens BAC clone RP11-140M23 from 4, complete sequence
          Length = 176923

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    aagatgcctttcttccttcct 170
              |||||||||||||||||||||
Sbjct: 135804 aagatgcctttcttccttcct 135824
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>gb|AC073516.4| Homo sapiens BAC clone RP11-147C20 from 2, complete sequence
          Length = 85368

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 152   gatgcctttcttccttccttt 172
             |||||||||||||||||||||
Sbjct: 68089 gatgcctttcttccttccttt 68069
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>gb|AC026888.6|AC026888 Homo sapiens chromosome 14 clone CTD-2243E23 and CTD-2009K21 map
             14q24.3-31, complete sequence
          Length = 208894

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   tgaagaagatgcctttcttcc 165
             |||||||||||||||||||||
Sbjct: 93754 tgaagaagatgcctttcttcc 93734
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>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    tttcttccttcctttgctctt 178
              |||||||||||||||||||||
Sbjct: 867254 tttcttccttcctttgctctt 867274
to top
>gb|AC155330.3| Mus musculus 6 BAC RP24-146L23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 215602

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 160    tcttccttcctttgctcttct 180
              |||||||||||||||||||||
Sbjct: 214527 tcttccttcctttgctcttct 214547
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>emb|AL683803.9| Mouse DNA sequence from clone RP23-448D15 on chromosome X, complete
             sequence
          Length = 93337

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 157   ctttcttccttcctttgctcttctc 181
             |||||||||||||||| ||||||||
Sbjct: 41078 ctttcttccttccttttctcttctc 41102
to top
>emb|AL845171.5| Mouse DNA sequence from clone RP23-38N8 on chromosome 4, complete
              sequence
          Length = 229784

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     aaataaataaatacccagcta 105
              |||||||||||||||||||||
Sbjct: 106745 aaataaataaatacccagcta 106765
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>dbj|AB050434.1| Macaca fascicularis brain cDNA, clone:QnpA-21965
          Length = 2107

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 145 tgaagaagatgcctttcttcc 165
           |||||||||||||||||||||
Sbjct: 649 tgaagaagatgcctttcttcc 629
to top
>ref|NM_129148.1| Arabidopsis thaliana CPK25; ATP binding / calcium ion binding /
           calcium- and calmodulin-dependent protein kinase/
           kinase/ protein kinase/ protein se> AT2G35890 (CPK25)
           mRNA, complete cds
          Length = 1563

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 agttttctccaggcttgaga 257
           ||||||||||||||||||||
Sbjct: 868 agttttctccaggcttgaga 849
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>gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, complete sequence
          Length = 190160

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agctacaagcaagcaaacaa 120
             ||||||||||||||||||||
Sbjct: 22186 agctacaagcaagcaaacaa 22167
to top
>gb|AE008457.1| Streptococcus pneumoniae R6 section 73 of 184 of the complete genome
          Length = 11316

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ttcttccttcctttgctctt 178
            ||||||||||||||||||||
Sbjct: 6508 ttcttccttcctttgctctt 6527
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>gb|AC114621.8| Mus musculus chromosome 3, clone RP24-93M7, complete sequence
          Length = 198404

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   atgcctttcttccttccttt 172
             ||||||||||||||||||||
Sbjct: 20736 atgcctttcttccttccttt 20717
to top
>gb|AC150887.4| Bos taurus  BAC CH240-483B20 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 157543

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    cacggccaaataaataaata 97
             ||||||||||||||||||||
Sbjct: 37024 cacggccaaataaataaata 37043
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>gb|AC107738.16| Mus musculus chromosome 1, clone RP23-348C6, complete sequence
          Length = 228427

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     aaataaataaatacccagct 104
              ||||||||||||||||||||
Sbjct: 112020 aaataaataaatacccagct 112001
to top
>gb|AC138330.4| Mus musculus BAC clone RP23-19L20 from chromosome 13, complete sequence
          Length = 190901

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cctttcttccttcctttgct 175
             ||||||||||||||||||||
Sbjct: 20763 cctttcttccttcctttgct 20744
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>gb|AC138260.7| Mus musculus chromosome 6, clone RP23-247I19, complete sequence
          Length = 197686

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 156   cctttcttccttcctttgct 175
             ||||||||||||||||||||
Sbjct: 23417 cctttcttccttcctttgct 23398
to top
>gb|AC147340.2| Pan troglodytes BAC clone CH251-17L10 from Y, complete sequence
          Length = 164839

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttgaagaagatgcctttctt 163
              ||||||||||||||||||||
Sbjct: 141957 ttgaagaagatgcctttctt 141938



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 66570 ttgaagaagatgcctttctt 66589
to top
>gb|AC147137.2| Pan troglodytes BAC clone CH251-346F4 from Y, complete sequence
          Length = 130330

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 49133 ttgaagaagatgcctttctt 49114
to top
>gb|AC147658.2| Pan troglodytes BAC clone CH251-408K8 from Y, complete sequence
          Length = 190772

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttgaagaagatgcctttctt 163
              ||||||||||||||||||||
Sbjct: 131355 ttgaagaagatgcctttctt 131336



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 55861 ttgaagaagatgcctttctt 55880
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>gb|AC147478.2| Pan troglodytes BAC clone CH251-571L4 from Y, complete sequence
          Length = 188138

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 17764 ttgaagaagatgcctttctt 17783
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>gb|AC114643.9| Mus musculus chromosome 6, clone RP24-127D6, complete sequence
          Length = 215696

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cctttcttccttcctttgct 175
             ||||||||||||||||||||
Sbjct: 55800 cctttcttccttcctttgct 55819
to top
>gb|AC055873.8| Homo sapiens chromosome 15, clone RP11-339F1, complete sequence
          Length = 194765

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    atgcctttcttccttccttt 172
              ||||||||||||||||||||
Sbjct: 185411 atgcctttcttccttccttt 185392
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>gb|AC147131.2| Pan troglodytes BAC clone CH251-403A11 from Y, complete sequence
          Length = 168159

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 50050 ttgaagaagatgcctttctt 50069
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>gb|AC110574.9| Mus musculus chromosome 3, clone RP23-324B15, complete sequence
          Length = 196451

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    atgcctttcttccttccttt 172
              ||||||||||||||||||||
Sbjct: 161213 atgcctttcttccttccttt 161194
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>emb|CR956634.3| Pig DNA sequence from clone CH242-277I8 on chromosome 17, complete
              sequence
          Length = 206278

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    cctttcttccttcctttgctcttc 179
              |||||||||||||||||| |||||
Sbjct: 160067 cctttcttccttcctttggtcttc 160090
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>gb|AC144381.2| Pan troglodytes BAC clone RP43-12C6 from Y, complete sequence
          Length = 190660

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttgaagaagatgcctttctt 163
              ||||||||||||||||||||
Sbjct: 131266 ttgaagaagatgcctttctt 131247



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 55754 ttgaagaagatgcctttctt 55773
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>gb|AC142306.1| Pan troglodytes BAC clone RP43-131E14 from Y, complete sequence
          Length = 159226

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttgaagaagatgcctttctt 163
              ||||||||||||||||||||
Sbjct: 131249 ttgaagaagatgcctttctt 131230



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 55835 ttgaagaagatgcctttctt 55854
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>gb|DQ446601.1| Arabidopsis thaliana clone pENTR221-At2g35890 calcium-dependent
           protein kinase/CDPK (At2g35890) mRNA, complete cds
          Length = 1563

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 agttttctccaggcttgaga 257
           ||||||||||||||||||||
Sbjct: 868 agttttctccaggcttgaga 849
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>emb|Z93242.1|HS389A20 Human DNA sequence from clone RP3-389A20 on chromosome Xp22.11-22.2
              Contains a calcium binding protein P22 (CHP)pseudogene, a
              novel gene, the 3' end of the NHS gene for Nance-Horan
              syndrome (congenital cataracts and dental anomalies), the
              SCML1 gene for sex comb on midleg-like 1 (Drosophila), a
              novel pseudogene and the RAI2 gene for retinoic acid
              induced 2, complete sequence
          Length = 208609

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    cctttcttccttcctttgctcttc 179
              ||||||||||||||||| ||||||
Sbjct: 123883 cctttcttccttcctttcctcttc 123906
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>emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on chromosome 1 Contains
            two novel genes, a ribosomal protein L26-like 1
            pseudogene (RPL26L1), the PIK3CD gene for
            phosphoinositide-3-kinase, catalytic, delta polypeptide,
            the 3' end of the CLSTN1 gene for calsyntenin 1 and a CpG
            island, complete sequence
          Length = 163934

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 85   aaataaataaatacccagct 104
            ||||||||||||||||||||
Sbjct: 2797 aaataaataaatacccagct 2816
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>emb|AL590131.8| Human DNA sequence from clone RP13-102H20 on chromosome X Contains gene
              FLJ30058, the 5' end of a novel gene and four CpG islands,
              complete sequence
          Length = 146343

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    caagcaaacaacactctcat 129
              ||||||||||||||||||||
Sbjct: 142508 caagcaaacaacactctcat 142489
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>emb|AL360087.13| Human DNA sequence from clone RP11-558G9 on chromosome Xp11.4-21.2,
             complete sequence
          Length = 78750

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   cttgaagaagatgcctttct 162
             ||||||||||||||||||||
Sbjct: 52086 cttgaagaagatgcctttct 52105
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>emb|AL355294.14| Human DNA sequence from clone RP11-379B8 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 101016

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   ctcattagcataaaccttca 552
             ||||||||||||||||||||
Sbjct: 52839 ctcattagcataaaccttca 52820
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>emb|AL353660.11| Human DNA sequence from clone RP11-459P23 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 129241

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    cctttcttccttcctttgct 175
              ||||||||||||||||||||
Sbjct: 127740 cctttcttccttcctttgct 127759
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>gb|AC110072.3| Homo sapiens BAC clone RP11-18C16 from 4, complete sequence
          Length = 188672

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    tcaacagccttcattctaaa 199
              ||||||||||||||||||||
Sbjct: 154077 tcaacagccttcattctaaa 154096
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 144      ttgaagaagatgcctttctt 163
                ||||||||||||||||||||
Sbjct: 12267710 ttgaagaagatgcctttctt 12267691



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 144      ttgaagaagatgcctttctt 163
                ||||||||||||||||||||
Sbjct: 12192216 ttgaagaagatgcctttctt 12192235



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     ttgaagaagatgcctttctt 163
               ||||||||||||||||||||
Sbjct: 5651033 ttgaagaagatgcctttctt 5651052



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     ttgaagaagatgcctttctt 163
               ||||||||||||||||||||
Sbjct: 2069684 ttgaagaagatgcctttctt 2069665



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     ttgaagaagatgcctttctt 163
               ||||||||||||||||||||
Sbjct: 1994297 ttgaagaagatgcctttctt 1994316
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>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library)
             complete sequence
          Length = 236281

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cctttcttccttcctttgct 175
             ||||||||||||||||||||
Sbjct: 96003 cctttcttccttcctttgct 96022
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>gb|AC158602.6| Mus musculus 10 BAC RP23-136G23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 182817

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 160   tcttccttcctttgctcttc 179
             ||||||||||||||||||||
Sbjct: 94285 tcttccttcctttgctcttc 94304
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>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 214029

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 498    tccttcatttctggatcaca 517
              ||||||||||||||||||||
Sbjct: 120840 tccttcatttctggatcaca 120859
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>gb|AC023274.2|AC023274 Homo sapiens clone RP11-307L15, complete sequence
          Length = 137682

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 19359 ttgaagaagatgcctttctt 19378
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>gb|AC155935.2| Pan troglodytes BAC clone CH251-589G5 from chromosome y, complete
              sequence
          Length = 201663

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    ttgaagaagatgcctttctt 163
              ||||||||||||||||||||
Sbjct: 138570 ttgaagaagatgcctttctt 138551



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 63076 ttgaagaagatgcctttctt 63095
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>gb|AC152420.2| Pan troglodytes BAC clone CH251-595G8 from chromosome y, complete
             sequence
          Length = 155543

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 87351 ttgaagaagatgcctttctt 87370
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>gb|AC012360.7| Homo sapiens BAC clone RP11-332H14 from 2, complete sequence
          Length = 200918

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    ctacaagcaagcaaacaaca 122
              ||||||||||||||||||||
Sbjct: 180692 ctacaagcaagcaaacaaca 180711
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>gb|AC009232.3| Homo sapiens BAC clone RP11-352J11 from 2, complete sequence
          Length = 139885

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   tgaagaagatgcctttcttc 164
             ||||||||||||||||||||
Sbjct: 13857 tgaagaagatgcctttcttc 13876
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>gb|AC096570.1| Homo sapiens BAC clone RP11-368O18 from 2, complete sequence
          Length = 207972

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   aagcaagcaaacaacactct 126
             ||||||||||||||||||||
Sbjct: 33212 aagcaagcaaacaacactct 33231
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>gb|AC007562.4|AC007562 Homo sapiens BAC clone RP11-497C14 from Y, complete sequence
          Length = 137077

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ttgaagaagatgcctttctt 163
             ||||||||||||||||||||
Sbjct: 81115 ttgaagaagatgcctttctt 81096
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>gb|AC138789.1| Homo sapiens BAC clone CTD-2593N8 from 7, complete sequence
          Length = 155989

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tcaacagccttcattctaaa 199
              ||||||||||||||||||||
Sbjct: 125884 tcaacagccttcattctaaa 125865
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     ttgaagaagatgcctttctt 163
               ||||||||||||||||||||
Sbjct: 3781035 ttgaagaagatgcctttctt 3781016



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     ttgaagaagatgcctttctt 163
               ||||||||||||||||||||
Sbjct: 2267328 ttgaagaagatgcctttctt 2267347
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>gb|AC079044.21| Mus musculus strain C57BL/6J chromosome 16 clone rp23-51l7, complete
              sequence
          Length = 228349

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    atgcctttcttccttccttt 172
              ||||||||||||||||||||
Sbjct: 120515 atgcctttcttccttccttt 120534
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>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1
          Length = 81365

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 373  tacacttgatgctgtagccttccctctt 400
            |||||||||||||||| ||||| |||||
Sbjct: 4670 tacacttgatgctgtaaccttctctctt 4643
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>gb|AC006222.1|AC006222 Homo sapiens, clone hRPK.12_A_1, complete sequence
          Length = 165643

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 533    ctcattagcataaaccttca 552
              ||||||||||||||||||||
Sbjct: 133296 ctcattagcataaaccttca 133277
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>gb|AC087802.13| Mus musculus strain C57BL/6J chromosome 16 clone rp23-472f15, complete
              sequence
          Length = 187260

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    atgcctttcttccttccttt 172
              ||||||||||||||||||||
Sbjct: 106601 atgcctttcttccttccttt 106620
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>gb|U12683.1|XLU12683 Xenopus laevis integrin alpha5 subunit mRNA, complete cds
          Length = 5159

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 173  gctcttctcaacagccttcattct 196
            |||| |||||||||||||||||||
Sbjct: 1358 gctcctctcaacagccttcattct 1381
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>gb|U12646.1|XLU12646 Xenopus laevis integrin alpha5tr subunit truncated cytoplasmic
           variant mRNA, partial cds
          Length = 2030

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 173 gctcttctcaacagccttcattct 196
           |||| |||||||||||||||||||
Sbjct: 93  gctcctctcaacagccttcattct 116
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>emb|AL845488.7| Mouse DNA sequence from clone RP23-215P8 on chromosome 2, complete
              sequence
          Length = 153445

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    cctttcttccttcctttgctcttc 179
              |||| |||||||||||||||||||
Sbjct: 138666 ccttccttccttcctttgctcttc 138643
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>emb|AL844572.8| Mouse DNA sequence from clone RP23-40C5 on chromosome 4, complete
             sequence
          Length = 78062

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   cctttcttccttcctttgctcttc 179
             |||||||||||||||||| |||||
Sbjct: 47696 cctttcttccttcctttgttcttc 47719
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>emb|AL672091.4| Mouse DNA sequence from clone RP23-185L10 on chromosome X, complete
              sequence
          Length = 206291

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    tcttctcaacagccttcatt 194
              ||||||||||||||||||||
Sbjct: 131152 tcttctcaacagccttcatt 131171
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>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete
              sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 523    tttttctctgctcattagca 542
              ||||||||||||||||||||
Sbjct: 156734 tttttctctgctcattagca 156715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,885,056
Number of Sequences: 3902068
Number of extensions: 7885056
Number of successful extensions: 246096
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 245237
Number of HSP's gapped (non-prelim): 851
length of query: 585
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 562
effective length of database: 17,143,297,704
effective search space: 9634533309648
effective search space used: 9634533309648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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