Clone Information

BLAST Search Result

Clone Name	basd17f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PHYA3_AVESA (P06593) Phytochrome A type 3 (AP3)	306	3e-83
2	PHYA4_AVESA (P06594) Phytochrome A type 4 (AP4)	306	3e-83
3	PHYA_SORBI (P93526) Phytochrome a	288	5e-78
4	PHYA_ORYSA (P10931) Phytochrome A	285	8e-77
5	PHYA1_MAIZE (P19862) Phytochrome A	277	2e-74
6	PHYA_SOLTU (P30733) Phytochrome A	171	1e-42
7	PHYA_PEA (P15001) Phytochrome A	171	2e-42
8	PHYA_SOYBN (P42500) Phytochrome A	168	1e-41
9	PHYA_LATSA (P93673) Phytochrome type A	167	2e-41
10	PHYA_ARATH (P14712) Phytochrome A	166	3e-41
11	PHYA1_TOBAC (P33530) Phytochrome A1	166	5e-41
12	PHYA_CUCPE (P06592) Phytochrome A	160	2e-39
13	PHY_PICAB (Q40762) Phytochrome	149	7e-36
14	PHYA_PETCR (P55141) Phytochrome A	142	5e-34
15	PHY_PINSY (Q41046) Phytochrome	142	8e-34
16	PHY1_SELMA (Q01549) Phytochrome 1	141	1e-33
17	PHY2_CERPU (Q39557) Phytochrome 2	137	2e-32
18	PHY_MOUSC (P33529) Phytochrome	137	3e-32
19	PHY1_PHYPA (P36505) Phytochrome 1	135	6e-32
20	PHYB_TOBAC (P29130) Phytochrome B	134	2e-31
21	PHYD_ARATH (P42497) Phytochrome D	133	4e-31
22	PHYB_SOLTU (P34094) Phytochrome B	132	9e-31
23	PHYB_ARATH (P14713) Phytochrome B	131	1e-30
24	PHYA_POPTM (O49934) Phytochrome A	131	1e-30
25	PHYB1_LYCES (Q9ZS62) Phytochrome B1	130	2e-30
26	PHYB_SOYBN (P42499) Phytochrome B	128	1e-29
27	PHYB_SORBI (P93527) Phytochrome B	123	4e-28
28	PHYB_ORYSA (P25764) Phytochrome B	122	7e-28
29	PHY_ADICA (P42496) Phytochrome 1	119	6e-27
30	PHYC_ARATH (P14714) Phytochrome C	118	1e-26
31	PHYC_SORBI (P93528) Phytochrome C	116	5e-26
32	PHYE_IPONI (P55004) Phytochrome E	114	1e-25
33	PHYC_ORYSA (Q9ZWI9) Phytochrome C	108	8e-24
34	PHYE_ARATH (P42498) Phytochrome E	87	3e-17
35	LUXQ_VIBCH (Q9KLK7) Autoinducer 2 sensor kinase/phosphatase luxQ...	47	5e-05
36	MAK3_SCHPO (O74539) Peroxide stress-activated histidine kinase m...	44	3e-04
37	BARA_SHIFL (P59342) Signal transduction histidine-protein kinase...	40	0.003
38	BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase...	40	0.003
39	BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase...	40	0.003
40	BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase...	40	0.003
41	LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ...	36	0.084
42	LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ...	36	0.084
43	LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ...	35	0.11
44	MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase m...	34	0.24
45	LUXQ_VIBHA (P54302) Autoinducer 2 sensor kinase/phosphatase luxQ...	34	0.24
46	ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)	34	0.24
47	GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)	33	0.41
48	SASA_SYNEL (Q8DMT2) Adaptive-response sensory-kinase sasA (EC 2....	32	0.92
49	ETR1_LYCES (Q41342) Ethylene receptor 1 (EC 2.7.13.3) (LeETR1)	32	0.92
50	MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase m...	32	1.2
51	IFNAH_BOVIN (P49878) Interferon alpha-H precursor	30	4.6
52	IFNAB_BOVIN (P05008) Interferon alpha-B precursor	30	4.6
53	SYP71_ARATH (Q9SF29) Syntaxin-71 (AtSYP71)	30	6.0

>PHYA3_AVESA (P06593) Phytochrome A type 3 (AP3)|
          Length = 1128

 Score =  306 bits (784), Expect = 3e-83
 Identities = 150/186 (80%), Positives = 158/186 (84%)
 Frame = +1

Query: 1    APFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRR 180
            APFGFFDRSGKY ECLLS N + NE GLITGVFCFIH+ SH                 +R
Sbjct: 836  APFGFFDRSGKYIECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKR 895

Query: 181  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNI 360
            LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQM+QIHV DNCHHQ+NKILADLDQD+I
Sbjct: 896  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSI 955

Query: 361  MENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQ 540
             E SSCLDLEMAEF+LQDVVVAAVSQVLI CQGKGIRISCNLPERFMKQ VYGDG+RLQQ
Sbjct: 956  TEKSSCLDLEMAEFLLQDVVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQ 1015

Query: 541  ILSDFL 558
            ILSDFL
Sbjct: 1016 ILSDFL 1021

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>PHYA4_AVESA (P06594) Phytochrome A type 4 (AP4)|
          Length = 1128

 Score =  306 bits (783), Expect = 3e-83
 Identities = 150/186 (80%), Positives = 157/186 (84%)
 Frame = +1

Query: 1    APFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRR 180
            APFGFFDRSGKY ECLLS N + NE GLITGVFCFIH+ SH                 +R
Sbjct: 836  APFGFFDRSGKYIECLLSANRKENEGGLITGVFCFIHVASHELQHALQVQQASEQTSLKR 895

Query: 181  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNI 360
            LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQM+QIHV DNCHHQ+NKILADLDQD+I
Sbjct: 896  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMKQIHVGDNCHHQINKILADLDQDSI 955

Query: 361  MENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQ 540
             E SSCLDLEMAEFV QDVVVAAVSQVLI CQGKGIRISCNLPERFMKQ VYGDG+RLQQ
Sbjct: 956  SEKSSCLDLEMAEFVFQDVVVAAVSQVLITCQGKGIRISCNLPERFMKQSVYGDGVRLQQ 1015

Query: 541  ILSDFL 558
            ILSDFL
Sbjct: 1016 ILSDFL 1021

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>PHYA_SORBI (P93526) Phytochrome a|
          Length = 1131

 Score =  288 bits (738), Expect = 5e-78
 Identities = 139/186 (74%), Positives = 155/186 (83%)
 Frame = +1

Query: 1    APFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRR 180
            APFG FDR+GKY ECLLSVN + N DG++TGVFCFIH+PS                  RR
Sbjct: 839  APFGLFDRNGKYIECLLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRR 898

Query: 181  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNI 360
            LKAFSYMRHAIN PLSGMLYSR+ LK+T LNEEQMRQ+HV+D+CH QLNKILADLDQDNI
Sbjct: 899  LKAFSYMRHAINKPLSGMLYSRETLKSTGLNEEQMRQVHVADSCHRQLNKILADLDQDNI 958

Query: 361  MENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQ 540
             + SSCLDL+MAEFVL+DVVV+AVSQVLI CQGKGIR++CNLPERFMKQ VYGDGIRLQQ
Sbjct: 959  TDKSSCLDLDMAEFVLEDVVVSAVSQVLIGCQGKGIRVACNLPERFMKQKVYGDGIRLQQ 1018

Query: 541  ILSDFL 558
            ILSDFL
Sbjct: 1019 ILSDFL 1024

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>PHYA_ORYSA (P10931) Phytochrome A|
          Length = 1128

 Score =  285 bits (728), Expect = 8e-77
 Identities = 136/186 (73%), Positives = 154/186 (82%)
 Frame = +1

Query: 1    APFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRR 180
            APF FFDR+GKY ECLLSVN + N DG+ITGVFCFI +PSH                  +
Sbjct: 839  APFSFFDRNGKYIECLLSVNRKVNADGVITGVFCFIQVPSHELQHALHVQQASQQNALTK 898

Query: 181  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNI 360
            LKA+SYMRHAINNPLSGMLYSRKALKNT LNEEQM++++V+D+CH QLNKIL+DLDQD++
Sbjct: 899  LKAYSYMRHAINNPLSGMLYSRKALKNTGLNEEQMKEVNVADSCHRQLNKILSDLDQDSV 958

Query: 361  MENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQ 540
            M  SSCLDLEM EFVLQDV VAAVSQVLI CQGKGIR+SCNLPER+MKQ VYGDG+RLQQ
Sbjct: 959  MNKSSCLDLEMVEFVLQDVFVAAVSQVLITCQGKGIRVSCNLPERYMKQTVYGDGVRLQQ 1018

Query: 541  ILSDFL 558
            ILSDFL
Sbjct: 1019 ILSDFL 1024

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>PHYA1_MAIZE (P19862) Phytochrome A|
          Length = 1131

 Score =  277 bits (708), Expect = 2e-74
 Identities = 135/186 (72%), Positives = 150/186 (80%)
 Frame = +1

Query: 1    APFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRR 180
            A FGFFDR+ KY ECLLSVN + N DG++TGVFCFIH+PS                  R+
Sbjct: 839  ASFGFFDRNEKYVECLLSVNRKVNADGVVTGVFCFIHVPSDDLQHALHVQQASEQTAQRK 898

Query: 181  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNI 360
            LKAFSYMRHAIN PLSGMLYSR+ LK+T LNEEQMRQ+ V DNCH QLNKILADLDQDNI
Sbjct: 899  LKAFSYMRHAINKPLSGMLYSRETLKSTGLNEEQMRQVRVGDNCHRQLNKILADLDQDNI 958

Query: 361  MENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQ 540
             + SSCLDL+MAEFVLQDVVV+AVSQVLI CQ KGIR++CNLPER MKQ VYGDGIRLQQ
Sbjct: 959  TDKSSCLDLDMAEFVLQDVVVSAVSQVLIGCQAKGIRVACNLPERSMKQKVYGDGIRLQQ 1018

Query: 541  ILSDFL 558
            I+SDFL
Sbjct: 1019 IVSDFL 1024

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>PHYA_SOLTU (P30733) Phytochrome A|
          Length = 1123

 Score =  171 bits (434), Expect = 1e-42
 Identities = 86/185 (46%), Positives = 119/185 (64%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PFGFF R GKY ECLL V+ R +++G +TG+FCF+ + SH                 +RL
Sbjct: 837  PFGFFARYGKYVECLLCVSKRLDKEGAVTGLFCFLQLASHELQQALHVQRLSEQTALKRL 896

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+R  I NPLSG+++SRK L+ T L EEQ   +H S  C  QL+KIL D D D+I+
Sbjct: 897  KVLAYIRRQIRNPLSGIIFSRKMLEGTSLGEEQKNILHTSAQCQRQLDKILDDTDLDSII 956

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            E    LDLEM EF L +V+VA++SQV++   GK I IS ++ E  + + +YGD  RLQQ+
Sbjct: 957  E--GYLDLEMLEFKLHEVLVASISQVMMKSNGKNIMISNDMVEDLLNETLYGDSPRLQQV 1014

Query: 544  LSDFL 558
            L++FL
Sbjct: 1015 LANFL 1019

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>PHYA_PEA (P15001) Phytochrome A|
          Length = 1124

 Score =  171 bits (432), Expect = 2e-42
 Identities = 85/185 (45%), Positives = 119/185 (64%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PFGFF R GKY ECLLSV+ + + +GL+TGVFCF+ + S                  +RL
Sbjct: 837  PFGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRL 896

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +YM+  I NPL+G+++S K L+ TDL  EQ R ++ S  C  QL+KIL D D D I+
Sbjct: 897  KVLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKRIVNTSSQCQRQLSKILDDSDLDGII 956

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            +    LDLEMAEF L +V+V ++SQV+     KGIRI+ ++ E   ++ +YGD +RLQQ+
Sbjct: 957  D--GYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIARETLYGDSLRLQQV 1014

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1015 LADFL 1019

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>PHYA_SOYBN (P42500) Phytochrome A|
          Length = 1131

 Score =  168 bits (425), Expect = 1e-41
 Identities = 86/185 (46%), Positives = 117/185 (63%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PFGFF R+GKY ECLLSV+ + + +GL+TGVFCF+ + S                  +RL
Sbjct: 844  PFGFFARNGKYVECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASKRL 903

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
             A SYM+  I NPL G+++SRK L+ TDL  EQ + +  S  C  QL+KIL D D D I+
Sbjct: 904  NALSYMKRQIRNPLCGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDTII 963

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            +    LDLEMAEF L +V+V ++SQV+    GK IRI  ++    M + +YGD +RLQQ+
Sbjct: 964  D--GYLDLEMAEFTLHEVLVTSLSQVMEKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQV 1021

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1022 LADFL 1026

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>PHYA_LATSA (P93673) Phytochrome type A|
          Length = 1124

 Score =  167 bits (423), Expect = 2e-41
 Identities = 84/184 (45%), Positives = 118/184 (64%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGFF R GKY ECLLSV+ + + +GL+TGVFCF+ + S                  +RLK
Sbjct: 838  FGFFSRKGKYVECLLSVSKKIDAEGLVTGVFCFLQLASPELQQALHIQRLSEQTALKRLK 897

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +YM+  I NPL+G+++S K L+ TDL  EQ + ++ S  C  QL+KIL D D D I++
Sbjct: 898  VLTYMKRQIRNPLAGIVFSSKMLEGTDLETEQKQIVNTSSQCQRQLSKILDDSDLDGIID 957

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                LDLEMAEF L +V+V ++SQV+     KGIRI+ ++ E   K+ +YGD +RLQQ+L
Sbjct: 958  --GYLDLEMAEFTLHEVLVTSLSQVMNRSNTKGIRIANDVAEHIAKESLYGDSLRLQQVL 1015

Query: 547  SDFL 558
            +DFL
Sbjct: 1016 ADFL 1019

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>PHYA_ARATH (P14712) Phytochrome A|
          Length = 1122

 Score =  166 bits (421), Expect = 3e-41
 Identities = 81/184 (44%), Positives = 116/184 (63%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            F FF R GKY ECLL V+ + + +G++TGVFCF+ + SH                 +RLK
Sbjct: 839  FAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLK 898

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
            A +Y++  I NPLSG++++RK ++ T+L  EQ R +  S  C  QL+KIL D D ++I+E
Sbjct: 899  ALAYIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIE 958

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
               CLDLEM EF L +V+ A+ SQV++   GK +RI+    E  M   +YGD IRLQQ+L
Sbjct: 959  --GCLDLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVL 1016

Query: 547  SDFL 558
            +DF+
Sbjct: 1017 ADFM 1020

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>PHYA1_TOBAC (P33530) Phytochrome A1|
          Length = 1124

 Score =  166 bits (419), Expect = 5e-41
 Identities = 82/184 (44%), Positives = 117/184 (63%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGFF R+GKY ECLL V+ R + +G +TG+FCF+ + SH                 +RLK
Sbjct: 838  FGFFARNGKYVECLLCVSKRLDREGAVTGLFCFLQLASHELQQALHIQRLSEQTALKRLK 897

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +Y+R  I NPLSG+++SRK L+ T+L EEQ   +  S  C  QLNKIL D D D+I++
Sbjct: 898  VLAYIRRQIRNPLSGIIFSRKMLEGTNLGEEQKNILRTSSQCQRQLNKILDDTDLDSIID 957

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                LDLEM EF L +V+VA++SQ+++   GK I I  ++ E  + + +YGD  RLQQ+L
Sbjct: 958  --GYLDLEMLEFKLHEVLVASISQIMMKSNGKNIMIVNDMVEDLLNETLYGDSPRLQQVL 1015

Query: 547  SDFL 558
            ++FL
Sbjct: 1016 ANFL 1019

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>PHYA_CUCPE (P06592) Phytochrome A|
          Length = 1124

 Score =  160 bits (406), Expect = 2e-39
 Identities = 78/186 (41%), Positives = 116/186 (62%)
 Frame = +1

Query: 1    APFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRR 180
            A FGF  R+G Y ECLL VN   ++DG +TG FCF+ +PSH                 +R
Sbjct: 835  ASFGFLARNGMYVECLLCVNKILDKDGAVTGFFCFLQLPSHELQQALNIQRLCEQTALKR 894

Query: 181  LKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNI 360
            L+A  Y++  I NPLSG+++SR+ L+ T+L  EQ   +  S  C  Q++K+L + D D I
Sbjct: 895  LRALGYIKRQIQNPLSGIIFSRRLLERTELGVEQKELLRTSGLCQKQISKVLDESDIDKI 954

Query: 361  MENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQ 540
            ++    +DLEM EF L +V++ ++SQV++  +GKGI+I    PE  M + +YGD +RLQQ
Sbjct: 955  ID--GFIDLEMDEFTLHEVLMVSISQVMLKIKGKGIQIVNETPEEAMSETLYGDSLRLQQ 1012

Query: 541  ILSDFL 558
            +L+DFL
Sbjct: 1013 VLADFL 1018

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>PHY_PICAB (Q40762) Phytochrome|
          Length = 1136

 Score =  149 bits (375), Expect = 7e-36
 Identities = 79/185 (42%), Positives = 111/185 (60%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR GK TE LLS N R + +G+ITGVFCF+H+ S                   RL
Sbjct: 849  PFSFFDRHGKNTEALLSANKRTDAEGIITGVFCFLHVTSTELQQALQVQRMAEQAAMDRL 908

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+R  I NPL G++++RK +++TDL+EEQ + +  S  C  QL K+L D D ++I 
Sbjct: 909  KELAYIRQEIRNPLYGIIFTRKLMESTDLSEEQKQIVQTSALCQRQLVKVLDDADLESI- 967

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
                 L+L+  EF L  V+ A VSQ +I  + KG+++  + PE      +YGD +RLQQI
Sbjct: 968  -EDGYLELDTIEFTLGTVLDAVVSQGMILSREKGLQLIRDSPEEIKTMCLYGDQLRLQQI 1026

Query: 544  LSDFL 558
            LS+FL
Sbjct: 1027 LSNFL 1031

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>PHYA_PETCR (P55141) Phytochrome A|
          Length = 1129

 Score =  142 bits (359), Expect = 5e-34
 Identities = 72/184 (39%), Positives = 105/184 (57%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            F FF   GKY ECLL  + + + +G +TG+FCF+ + S                  +RLK
Sbjct: 843  FSFFATDGKYVECLLCASKKLHGEGTVTGIFCFLQLASQELQQALHIQRLTEQTAMKRLK 902

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              SY+R    NPL G+ + R+ L+   + EEQ +    S +C   +NKIL D D D+I++
Sbjct: 903  TLSYLRRQAKNPLCGINFVREKLEEIGMGEEQTKLFRTSVHCQRHVNKILDDTDLDSIID 962

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                LDLEM+EF L DV VA+ SQV +   GK I++  N  E  M + +YGD +RLQ++L
Sbjct: 963  --GYLDLEMSEFRLHDVYVASRSQVSMRSNGKAIQVVDNFSEEMMSETLYGDSLRLQKVL 1020

Query: 547  SDFL 558
            +DF+
Sbjct: 1021 ADFM 1024

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>PHY_PINSY (Q41046) Phytochrome|
          Length = 1131

 Score =  142 bits (357), Expect = 8e-34
 Identities = 71/185 (38%), Positives = 108/185 (58%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFD+ GKY E LL+ N R + DG ITG FCF  I S                   RL
Sbjct: 839  PFAFFDKQGKYVEALLTANKRTDADGRITGSFCFFRIASSELQHALEVQRQQEKKCFARL 898

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+R  I NPL GM+++RK L+ TDL+++Q + +  S  C  Q+ K++ D+D +++ 
Sbjct: 899  KELAYIRQEIKNPLYGMMFTRKLLEETDLSDDQKQFVETSAVCERQMQKVMDDMDLESL- 957

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
                 ++L+ AEF+L  V+ A VSQ +I  + KG+++   +P       +YGD +++QQI
Sbjct: 958  -EDGYMELDTAEFILGTVIDAVVSQGMIVLREKGLQLIREIPGEVKTMRLYGDEVKIQQI 1016

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1017 LADFL 1021

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>PHY1_SELMA (Q01549) Phytochrome 1|
          Length = 1134

 Score =  141 bits (356), Expect = 1e-33
 Identities = 70/185 (37%), Positives = 107/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR GKY E LL+   RA+ +G ITGVFCF+HI S                   +L
Sbjct: 837  PFAFFDRQGKYVEALLTATKRADAEGSITGVFCFLHIASAELQQALTVQRATEKVALSKL 896

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+R  I NPL G++++R  ++ TDL+E+Q + +     C  Q+ KIL D+D ++I 
Sbjct: 897  KELAYIRQEIKNPLYGIMFTRTLMETTDLSEDQKQYVETGAVCEKQIRKILDDMDLESI- 955

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
                 L+L+  EF++  V+ A +SQ +I  + K +++    P+      +YGD +RLQQ+
Sbjct: 956  -EDGYLELDTTEFMMGTVMDAVISQGMITSKEKNLQLIRETPKEIKAMFLYGDQVRLQQV 1014

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1015 LADFL 1019

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>PHY2_CERPU (Q39557) Phytochrome 2|
          Length = 1121

 Score =  137 bits (345), Expect = 2e-32
 Identities = 72/184 (39%), Positives = 106/184 (57%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            F F +R GK+ E LLS N R N DG+ITGVFCF+ I S                   +LK
Sbjct: 830  FSFCNREGKFVEALLSTNKRTNADGVITGVFCFLQIASSELQQALTVQRATEKVAIAKLK 889

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +Y+R  I NPL G+ ++R+ L++TDL+++Q + +  S  C  QL K+L D+D ++I  
Sbjct: 890  ELAYIRQEIKNPLCGITFTRQLLEDTDLSDDQKQFLDTSAVCEQQLQKVLNDMDLESI-- 947

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                L+L+ AEF +  V+ A +SQ +   + KG++I    P       ++GD IRLQQ+L
Sbjct: 948  EDGYLELDTAEFEMGTVMDAVISQGMTTSREKGLQIIRETPREISTMRLFGDQIRLQQVL 1007

Query: 547  SDFL 558
            SDFL
Sbjct: 1008 SDFL 1011

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>PHY_MOUSC (P33529) Phytochrome|
          Length = 1124

 Score =  137 bits (344), Expect = 3e-32
 Identities = 71/185 (38%), Positives = 106/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF F+DRSGK  E LL+ + R N +G++TGVFCF+H  S                   + 
Sbjct: 831  PFTFYDRSGKIVEVLLTTSKRCNSEGVVTGVFCFLHTASSELQQALTVQKAAERVAEVKA 890

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+R  I NPL G+ ++R  +++T L+E+Q + I  S  C  QL +ILAD+D  +I 
Sbjct: 891  KELAYIRQEIQNPLDGIHFARSFMEHTVLSEDQKQLIETSATCEKQLRRILADMDLASI- 949

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
                 L+LE  EF +  V+ + VSQ +I    K +++ C+ P  F    V+GD +RLQQ+
Sbjct: 950  -EKGYLELETGEFSMATVMNSVVSQGMIQSTQKNLQLYCDTPPDFKSLSVFGDQVRLQQV 1008

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1009 LADFL 1013

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>PHY1_PHYPA (P36505) Phytochrome 1|
          Length = 1132

 Score =  135 bits (341), Expect = 6e-32
 Identities = 73/184 (39%), Positives = 104/184 (56%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            F FFDR GKY + LLS N R N DG+ITGVFCF+ I S                   +LK
Sbjct: 832  FSFFDREGKYVDVLLSTNKRTNADGVITGVFCFLQIASSELQQALKVQRATEKVAVAKLK 891

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +Y+   I NPL G+ ++R+ L++TDL+++Q + +  S  C  QL K L D+D ++I  
Sbjct: 892  ELAYIVREIKNPLCGLTFTRQLLEDTDLSDDQQQFLDTSAVCEQQLQKSLNDMDLESI-- 949

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                L+L+ AEF +  V+ A +SQ +   + KG++I    P       + GD IRLQQ+L
Sbjct: 950  EDGYLELDTAEFEMGTVMNAVISQGMTTSREKGLQIFRETPREINTMRLLGDQIRLQQVL 1009

Query: 547  SDFL 558
            SDFL
Sbjct: 1010 SDFL 1013

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>PHYB_TOBAC (P29130) Phytochrome B|
          Length = 1132

 Score =  134 bits (337), Expect = 2e-31
 Identities = 69/185 (37%), Positives = 106/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR+GKY + LL+ N R N +G I G FCFI I S                   ++
Sbjct: 841  PFSFFDRNGKYVQALLTANKRVNMEGQIIGAFCFIQIASPELQQALRVQRQQEKKCYSQM 900

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   I +PL+G+ ++   L+ TDL E Q + +  S  C  Q++KI+ D+D +NI 
Sbjct: 901  KELAYLCQEIKSPLNGIRFTNSLLEATDLTENQKQYLETSAACERQMSKIIRDVDLENIE 960

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L LE  EF L  V+ A VSQV++  + + +++  ++PE      V+GD +R+QQ+
Sbjct: 961  DGS--LTLEKEEFFLGSVIDAVVSQVMLLLRERSVQLIRDIPEEIKTLTVHGDQVRIQQV 1018

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1019 LADFL 1023

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>PHYD_ARATH (P42497) Phytochrome D|
          Length = 1164

 Score =  133 bits (334), Expect = 4e-31
 Identities = 69/185 (37%), Positives = 106/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR G++ + LL++N R + DG I G FCF+ IPS                   R 
Sbjct: 874  PFPFFDRKGEFIQALLTLNKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRR 933

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   I NPLSG+ ++   L++ DLNE+Q + +  S +C  Q++KI+ D+D  +I 
Sbjct: 934  KELAYIFQVIKNPLSGLRFTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSID 993

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S    LE  EF + +V  A VSQV++  + + +++  N+P       VYGD IRLQQ+
Sbjct: 994  DGSFL--LERTEFFIGNVTNAVVSQVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQV 1051

Query: 544  LSDFL 558
            L++FL
Sbjct: 1052 LAEFL 1056

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>PHYB_SOLTU (P34094) Phytochrome B|
          Length = 1130

 Score =  132 bits (331), Expect = 9e-31
 Identities = 68/185 (36%), Positives = 106/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR+GKY + LL+ N R N +G   G FCFI I S                   ++
Sbjct: 839  PFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQM 898

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   I +PL+G+ ++   L+ T+L E Q + +  S  C  Q++KI+ D+D +NI 
Sbjct: 899  KELAYICQEIKSPLNGIRFTNSLLEATNLTENQKQYLETSAACERQMSKIIRDIDLENIE 958

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L LE  +F L  V+ A VSQV++  + KG+++  ++PE      V+GD +R+QQ+
Sbjct: 959  DGS--LTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQV 1016

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1017 LADFL 1021

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>PHYB_ARATH (P14713) Phytochrome B|
          Length = 1172

 Score =  131 bits (330), Expect = 1e-30
 Identities = 67/185 (36%), Positives = 107/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR+GK+ + LL+ N R + +G + G FCF+ IPS                   + 
Sbjct: 870  PFPFFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKA 929

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   I NPLSGM ++   L+ TDLNE+Q + +  S +C  Q+++I+ D+D ++I 
Sbjct: 930  KELAYICQVIKNPLSGMRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESIE 989

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L  E  EF L  V+ A VSQ +   + +G+++  ++PE      V+GD IR+QQ+
Sbjct: 990  DGSFVLKRE--EFFLGSVINAIVSQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQL 1047

Query: 544  LSDFL 558
            L++FL
Sbjct: 1048 LAEFL 1052

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>PHYA_POPTM (O49934) Phytochrome A|
          Length = 1125

 Score =  131 bits (330), Expect = 1e-30
 Identities = 75/183 (40%), Positives = 105/183 (57%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGFF R+GKY ECLL V+ + + +G +TGVFCF+ + S                  +RLK
Sbjct: 838  FGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLK 897

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
            A +Y++  I NPLSG+++S K ++ T+L  EQ   +H S  C  QL+KIL D D D+I+E
Sbjct: 898  ALAYLKKQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIE 957

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                LDLEM EF L++               KGI I  +  +  M + +YGD IRLQQ+L
Sbjct: 958  --GYLDLEMVEFTLRE-YYGCYQSSHDEKHEKGIPIINDALK--MAETLYGDSIRLQQVL 1012

Query: 547  SDF 555
            +DF
Sbjct: 1013 ADF 1015

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>PHYB1_LYCES (Q9ZS62) Phytochrome B1|
          Length = 1131

 Score =  130 bits (327), Expect = 2e-30
 Identities = 67/185 (36%), Positives = 106/185 (57%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFDR+GKY + LL+ N R N +G   G FCFI I S                   ++
Sbjct: 840  PFSFFDRNGKYVQALLTANKRVNMEGDTIGAFCFIQIASPELQQALRVQRQQEKKCYSQM 899

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   + +PL+G+ ++   L+ T+L E Q + +  S  C  Q++KI+ D+D +NI 
Sbjct: 900  KELAYICQEVKSPLNGIRFTNSLLEATNLTEYQKQYLETSAACERQMSKIIRDVDLENIE 959

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L LE  +F L  V+ A VSQV++  + KG+++  ++PE      V+GD +R+QQ+
Sbjct: 960  DGS--LTLEKEDFFLGSVIDAVVSQVMLLLREKGVQLIRDIPEEIKTLTVHGDQVRIQQV 1017

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1018 LADFL 1022

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>PHYB_SOYBN (P42499) Phytochrome B|
          Length = 1156

 Score =  128 bits (321), Expect = 1e-29
 Identities = 67/185 (36%), Positives = 103/185 (55%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF F DR GKY +  L+ N R N +G I G FCF+ I S                   R+
Sbjct: 866  PFSFLDRHGKYVQTFLTANKRVNMEGQIIGAFCFLQIMSPELQQALKAQRQQEKEFLGRM 925

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   +  PLSG+ ++   L+ T L  EQ + +  S  C  Q+ KI+ D+D ++I 
Sbjct: 926  KELAYICQGVKKPLSGIRFTNSLLEATSLTNEQKQFLETSVACEKQMLKIIRDVDLESIE 985

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L+LE  EF+L +V+ A VSQV++  + + +++  ++PE      VYGD +R+QQ+
Sbjct: 986  DGS--LELEKGEFLLGNVINAVVSQVILLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQV 1043

Query: 544  LSDFL 558
            LSDFL
Sbjct: 1044 LSDFL 1048

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>PHYB_SORBI (P93527) Phytochrome B|
          Length = 1178

 Score =  123 bits (308), Expect = 4e-28
 Identities = 64/185 (34%), Positives = 102/185 (55%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFD++GKY + LL+ N+R+  DG   G FCF+ I S                   R+
Sbjct: 886  PFSFFDKNGKYVQALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARM 945

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   I NPLSG+ ++   L+ TDLN++Q + +     C  Q++KI+ D    +I 
Sbjct: 946  KELAYICQEIKNPLSGIRFTNSLLQMTDLNDDQRQFLETCSACEEQMSKIVKDATLQSIE 1005

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L LE +EF   DV+ A VSQ ++  + + +++  ++P+       YGD  R+QQ+
Sbjct: 1006 DGS--LVLEKSEFSFGDVMNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQV 1063

Query: 544  LSDFL 558
            L+DFL
Sbjct: 1064 LADFL 1068

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>PHYB_ORYSA (P25764) Phytochrome B|
          Length = 1171

 Score =  122 bits (306), Expect = 7e-28
 Identities = 65/185 (35%), Positives = 102/185 (55%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            PF FFD++GKY + LL+ N+R+  DG   G FCF+ I S                   R+
Sbjct: 879  PFSFFDKNGKYVQALLTANTRSRMDGEAIGAFCFLQIASPELQQAFEIQRHHEKKCYARM 938

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  +Y+   I NPL+G+ ++   L+ TDL ++Q + +  S  C  Q++KI+ D    +I 
Sbjct: 939  KELAYIYQEIKNPLNGIRFTNSLLEMTDLKDDQRQFLETSTACEKQMSKIVKDASLQSIE 998

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            + S  L LE  EF L  V+ A VSQV+I  + + +++  ++P+   +   YGD  R+QQ+
Sbjct: 999  DGS--LVLEKGEFSLGSVMNAVVSQVMIQLRERDLQLIRDIPDEIKEASAYGDQYRIQQV 1056

Query: 544  LSDFL 558
            L DFL
Sbjct: 1057 LCDFL 1061

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>PHY_ADICA (P42496) Phytochrome 1|
          Length = 1118

 Score =  119 bits (298), Expect = 6e-27
 Identities = 69/185 (37%), Positives = 100/185 (54%)
 Frame = +1

Query: 4    PFGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRL 183
            P  F+DR+G+  E LL  + R + DG ITGVFCF+H  S                     
Sbjct: 827  PLVFYDRNGRRVEALLIASKRTDADGRITGVFCFLHTASPELLQALIIKRAKEKVD---- 882

Query: 184  KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIM 363
            K  SY++  +  PL G+ ++R  L+ T+L  EQ + I  +  C  QL KIL D D +NI 
Sbjct: 883  KELSYVKEELKKPLEGLAFTRTVLEGTNLTIEQRQLIKTNAWCERQLRKILED-DLNNIE 941

Query: 364  ENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQI 543
            E    +DLEM+EF +  V+ A +SQ + A +GKG++I   +P       ++GD  RLQQ+
Sbjct: 942  EGY--MDLEMSEFFMGSVIDAVISQGMAASRGKGVQILTEIPNDVKLMCLFGDQARLQQV 999

Query: 544  LSDFL 558
            L+D L
Sbjct: 1000 LADLL 1004

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>PHYC_ARATH (P14714) Phytochrome C|
          Length = 1111

 Score =  118 bits (295), Expect = 1e-26
 Identities = 62/184 (33%), Positives = 100/184 (54%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGF+ R G + E LLS N R + +G +TGV CF+ +PS                    L 
Sbjct: 826  FGFYHRDGSFIEALLSANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALN 885

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +Y+RH + +P   + + +  L ++ L+E+Q R +  S  C  QL K+++D D + I E
Sbjct: 886  KLAYLRHEVKDPEKAISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEE 945

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                ++L+ +EF LQ+ + A V QV+     + ++ISC+ P+      +YGD +RLQQIL
Sbjct: 946  GY--VELDCSEFGLQESLEAVVKQVMELSIERKVQISCDYPQEVSSMRLYGDNLRLQQIL 1003

Query: 547  SDFL 558
            S+ L
Sbjct: 1004 SETL 1007

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>PHYC_SORBI (P93528) Phytochrome C|
          Length = 1135

 Score =  116 bits (290), Expect = 5e-26
 Identities = 62/184 (33%), Positives = 96/184 (52%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGFFD  GKY E LL+VN R N +G ITG  CF+H+ S                     K
Sbjct: 839  FGFFDTDGKYIESLLTVNKRINAEGKITGAICFLHVASPELQHALQVQKMSEQAATNSFK 898

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +Y+   + NPL+GM ++   L+ ++L EEQ + +  +  C  QL KIL D D ++I  
Sbjct: 899  ELTYIHQELRNPLNGMQFTCNLLEPSELTEEQRKLLSSNILCQDQLKKILHDTDLESI-- 956

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                +++   EF L++ +   + Q +   + K I I  + P    +  +YGD +RLQQ+L
Sbjct: 957  EQCYMEMNTVEFNLEEALNTVLMQGIPLGKEKRISIERDWPVEISRMYLYGDNLRLQQVL 1016

Query: 547  SDFL 558
            +D+L
Sbjct: 1017 ADYL 1020

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>PHYE_IPONI (P55004) Phytochrome E|
          Length = 1115

 Score =  114 bits (286), Expect = 1e-25
 Identities = 58/184 (31%), Positives = 104/184 (56%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGFFDR G + +  ++ N R +E G I G FCF+   +                    LK
Sbjct: 817  FGFFDRKGNFIDVFITANKRTDERGNIIGCFCFLQTMAVDHPQISARDIEDDRECLSTLK 876

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
             F+Y++  + NPL+G+ ++ K L+ T  ++ Q + +  S+ C  Q+  I+ ++D   I++
Sbjct: 877  EFAYIQQQMKNPLNGIRFTHKLLEGTVTSDHQKQFLETSEACEKQILSIIENMDSGGIVD 936

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
             +  ++L+  EFV+ +V+ A VSQV+I  + K +++  ++P++     +YGD I+LQ +L
Sbjct: 937  GNR-VELKTEEFVIGNVIDAVVSQVMIPLKEKNLQLLHDIPDQIKSLPIYGDQIKLQLVL 995

Query: 547  SDFL 558
            SDFL
Sbjct: 996  SDFL 999

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>PHYC_ORYSA (Q9ZWI9) Phytochrome C|
          Length = 1137

 Score =  108 bits (271), Expect = 8e-24
 Identities = 59/184 (32%), Positives = 93/184 (50%)
 Frame = +1

Query: 7    FGFFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLK 186
            FGFF+  GKY E L++   R + +G ITG  CF+H+ S                     K
Sbjct: 841  FGFFNTDGKYIESLMTATKRTDAEGKITGALCFLHVASPELQHALQVQKMSEQAAMNSFK 900

Query: 187  AFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIME 366
              +Y+R  + NPL+GM ++R  L+ +DL EEQ + +  +  C  QL KIL D D ++I  
Sbjct: 901  ELTYIRQELRNPLNGMQFTRNLLEPSDLTEEQRKLLASNVLCQEQLKKILHDTDLESI-- 958

Query: 367  NSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
                 ++   +F L++ +   + Q +   + K I I  + P       + GD +RLQQ+L
Sbjct: 959  EQCYTEMSTVDFNLEEALNTVLMQAMPQSKEKQISIDRDWPAEVSCMHLCGDNLRLQQVL 1018

Query: 547  SDFL 558
            +DFL
Sbjct: 1019 ADFL 1022

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>PHYE_ARATH (P42498) Phytochrome E|
          Length = 1112

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 51/182 (28%), Positives = 91/182 (50%)
 Frame = +1

Query: 13   FFDRSGKYTECLLSVNSRANEDGLITGVFCFIHIPSHXXXXXXXXXXXXXXXXXRRLKAF 192
            FF++ GKY E  L+ N   N +G +   F F+ I +                  + L   
Sbjct: 820  FFNKEGKYIEASLTANKSTNIEGKVIRCFFFLQIINKESGLSCPELKESA----QSLNEL 875

Query: 193  SYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENS 372
            +Y+R  I NPL+G+ ++ K L++++++  Q + +  SD C  Q+  I+   D  +I E  
Sbjct: 876  TYVRQEIKNPLNGIRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGK 935

Query: 373  SCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSD 552
              L LE  EF L++++   +SQV+I  + +  ++   + E      + GD ++LQ IL+D
Sbjct: 936  --LQLETEEFRLENILDTIISQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILAD 993

Query: 553  FL 558
             L
Sbjct: 994  LL 995

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>LUXQ_VIBCH (Q9KLK7) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 857

 Score = 46.6 bits (109), Expect = 5e-05
 Identities = 36/127 (28%), Positives = 59/127 (46%)
 Frame = +1

Query: 178 RLKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDN 357
           R +  + M H +  PL+G+L   + LK T LN+EQ   + V  +    L  +L D+   +
Sbjct: 480 RAEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFS 539

Query: 358 IMENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQ 537
            +E      ++  EF L+++V A        C  KG+ +  N        +V  D IR+ 
Sbjct: 540 RLEQGK-FRIQKNEFRLKELVCAIDRIYRPLCNEKGLELVVN-SNITTAAIVRSDQIRIN 597

Query: 538 QILSDFL 558
           QIL + L
Sbjct: 598 QILFNLL 604

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>MAK3_SCHPO (O74539) Peroxide stress-activated histidine kinase mak3 (EC|
            2.7.13.3) (Mcs4-associated kinase 3) (His-Asp
            phosphorelay kinase phk2)
          Length = 2344

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
 Frame = +1

Query: 205  HAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLD 384
            H +  P SG       L +T+L+ EQ   +  +      L +++ DL   + +E      
Sbjct: 1795 HELRTPFSGFYGMLSLLDDTNLDSEQRDIVSAARISCEMLLRVINDLLNFSKLEAGKVTL 1854

Query: 385  LEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNL-PERFMKQLVYGDGIRLQQILSDFL 558
                EF L+ VV   +  V  AC  KGI +S N+ P+  +     GDG+++ Q+L   L
Sbjct: 1855 ESDLEFSLESVVCDCMQSVYSACAEKGINLSYNVSPD--IPFFTAGDGMKIGQMLKSIL 1911

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>BARA_SHIFL (P59342) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/120 (24%), Positives = 60/120 (50%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H +  PL+G++   +    T+L   Q   ++  +   + L  I+ D+   + +E +  
Sbjct: 300 MSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLE-AGK 358

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
           L LE   F L+  +   V+ +  +   KG+ ++ N+ +  +   V GD +RLQQI+++ +
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNI-KSDVPDNVIGDPLRLQQIITNLV 417

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>BARA_ECOLI (P0AEC5) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/120 (24%), Positives = 60/120 (50%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H +  PL+G++   +    T+L   Q   ++  +   + L  I+ D+   + +E +  
Sbjct: 300 MSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLE-AGK 358

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
           L LE   F L+  +   V+ +  +   KG+ ++ N+ +  +   V GD +RLQQI+++ +
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNI-KSDVPDNVIGDPLRLQQIITNLV 417

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>BARA_ECOL6 (P0AEC6) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/120 (24%), Positives = 60/120 (50%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H +  PL+G++   +    T+L   Q   ++  +   + L  I+ D+   + +E +  
Sbjct: 300 MSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLE-AGK 358

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
           L LE   F L+  +   V+ +  +   KG+ ++ N+ +  +   V GD +RLQQI+++ +
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNI-KSDVPDNVIGDPLRLQQIITNLV 417

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>BARA_ECO57 (P0AEC7) Signal transduction histidine-protein kinase barA (EC|
           2.7.13.3)
          Length = 918

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 29/120 (24%), Positives = 60/120 (50%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H +  PL+G++   +    T+L   Q   ++  +   + L  I+ D+   + +E +  
Sbjct: 300 MSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLE-AGK 358

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
           L LE   F L+  +   V+ +  +   KG+ ++ N+ +  +   V GD +RLQQI+++ +
Sbjct: 359 LILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNI-KSDVPDNVIGDPLRLQQIITNLV 417

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>LUXQ_VIBVY (Q7MD16) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 857

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 29/120 (24%), Positives = 55/120 (45%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H I  PL+G+L   + LK +  + E ++Q+ V  N    L  +L D+   + +E    
Sbjct: 491 MSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLLAVLNDILDFSKIEQGK- 549

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
            +++  +F   D +    +     C+ KG+    +       QL + D +RL QI+ + +
Sbjct: 550 FNIKKRDFNFYDTLNTLENIYRPICREKGVSFEIHNQIPLDCQL-HTDQVRLNQIMFNLI 608

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>LUXQ_VIBVU (Q8D5Z6) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 857

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 29/120 (24%), Positives = 55/120 (45%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H I  PL+G+L   + LK +  + E ++Q+ V  N    L  +L D+   + +E    
Sbjct: 491 MSHEIRTPLNGILGIAQLLKRSVNDAENLKQVDVLCNSGEHLLAVLNDILDFSKIEQGK- 549

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
            +++  +F   D +    +     C+ KG+    +       QL + D +RL QI+ + +
Sbjct: 550 FNIKKRDFNFYDTLNTLENIYRPICREKGVSFEIHNQIPLDCQL-HTDQVRLNQIMFNLI 608

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>LUXQ_VIBPA (Q87GU5) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 858

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H I  P++G+L   + LK++   EEQ  QI V  +    L  +L D+   + +E    
Sbjct: 489 MSHEIRTPINGILGVAQLLKDSVEAEEQKNQIDVLRHSGEHLLAVLNDILDFSKIEQGK- 547

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQL-----VYGDGIRLQQI 543
            +++   F   D +    +     C+ KG+ +          QL     ++ D +RL QI
Sbjct: 548 FNIQKHPFSFADTMRTLENIYRPICENKGVELVIE------NQLDGNVEIFTDQVRLNQI 601

Query: 544 L 546
           L
Sbjct: 602 L 602

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>MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase mak2 (EC|
            2.7.13.3) (Mcs4-associated kinase 2) (His-Asp
            phosphorelay kinase phk1)
          Length = 2310

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 26/120 (21%), Positives = 54/120 (45%)
 Frame = +1

Query: 199  MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
            M H +  P S        L +T LNEEQ   +  +      L +I+ DL   + +++   
Sbjct: 1761 MSHELRTPFSSFYGMLSLLSDTKLNEEQYDIVSTAKQSCTSLVQIIDDLLNFSELKSGKM 1820

Query: 379  LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
                   F +++ +   +  V  +   K ++IS ++    +  L+ GD  +L+Q++++ L
Sbjct: 1821 KLEPDKVFDVEENIADCIELVYPSLSSKPVQISYDIYPN-VPALLAGDSAKLRQVITNLL 1879

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>LUXQ_VIBHA (P54302) Autoinducer 2 sensor kinase/phosphatase luxQ (EC 2.7.13.3)|
           (EC 3.1.3.-)
          Length = 859

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 29/116 (25%), Positives = 51/116 (43%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H I  P++G+L   + LK++   +EQ  QI V  +    L  +L D+   + +E    
Sbjct: 490 MSHEIRTPINGILGVAQLLKDSVDTQEQKNQIDVLCHSGEHLLAVLNDILDFSKIEQGK- 548

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQIL 546
            +++   F   D +    +     C  KG+ +     E      ++ D +RL QIL
Sbjct: 549 FNIQKHPFSFTDTMRTLENIYRPICTNKGVELVIE-NELDPNVEIFTDQVRLNQIL 603

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>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)|
          Length = 740

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H +  P+  ++     L+ TDL  EQ   +       + L  ++ D+   + +E+ S 
Sbjct: 351 MNHEMRTPMHAIIALSSLLQETDLTSEQRLMVETILKSSNLLATLINDVLDLSRLEDGS- 409

Query: 379 LDLEMAEFVLQDVV---------VAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIR 531
           L L++A F L  V          +A+V ++ I      + +S +LPE      V GD  R
Sbjct: 410 LQLDIATFNLHAVFRQVFNLIKPIASVKKLFIT-----LNVSPDLPE-----YVIGDEKR 459

Query: 532 LQQIL 546
           L QI+
Sbjct: 460 LVQIM 464

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>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)|
          Length = 907

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 29/120 (24%), Positives = 58/120 (48%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H I  PL+G+L     L+ ++L   Q   +   +     L  I+ ++   + +E +  
Sbjct: 282 MSHEIRTPLNGILGFTHLLQKSELTPRQFDYLGTIEKSADNLLSIINEILDFSKIE-AGK 340

Query: 379 LDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQQILSDFL 558
           L L+   F L+D++   ++ +  A   K + +  +L  R     + GD +RL+QIL++ +
Sbjct: 341 LVLDNIPFNLRDLLQDTLTILAPAAHAKQLEL-VSLVYRDTPLALSGDPLRLRQILTNLV 399

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>SASA_SYNEL (Q8DMT2) Adaptive-response sensory-kinase sasA (EC 2.7.13.3)|
          Length = 380

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 15/140 (10%)
 Frame = +1

Query: 184 KAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDN---CHHQ------LNKIL 336
           +  S + H + NPL+    + + L++ +L EE  +Q+ + D     HH       + +++
Sbjct: 153 RIISLLAHELRNPLTAGGIALETLES-NLQEESSQQLPIEDIQRLFHHARSQTQTMGQLI 211

Query: 337 ADL------DQDNIMENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERF 498
            DL       QD +   +  LDL       + +    V  V +  + K    + ++P   
Sbjct: 212 TDLLLAARGPQDKLQIMARQLDL-------RQLCQETVEDVRLNFERKKQHFTTDIPLDL 264

Query: 499 MKQLVYGDGIRLQQILSDFL 558
              LVYGDG R++Q+L + L
Sbjct: 265 --PLVYGDGDRIRQVLVNLL 282

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>ETR1_LYCES (Q41342) Ethylene receptor 1 (EC 2.7.13.3) (LeETR1)|
          Length = 754

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
 Frame = +1

Query: 199 MRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSC 378
           M H +  P+  ++     L+ TDL  EQ   +       + L  ++ D+   + +E+ S 
Sbjct: 365 MNHEMRTPMHAIIALSSLLQETDLTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGS- 423

Query: 379 LDLEMAEFVLQDVV---------VAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIR 531
           L L++  F L  +          +A+V ++ +      + +S +LPE      V GD  R
Sbjct: 424 LQLDIGTFNLHALFREVHSLIKPIASVKKLFVT-----LSLSSDLPE-----YVIGDEKR 473

Query: 532 LQQIL 546
           L QIL
Sbjct: 474 LMQIL 478

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>MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase mak1 (EC|
            2.7.13.3) (Mcs4-associated kinase 1) (His-Asp
            phosphorelay kinase phk3)
          Length = 1639

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/122 (20%), Positives = 54/122 (44%)
 Frame = +1

Query: 178  RLKAFSYMRHAINNPLSGMLYSRKALKNTDLNEEQMRQIHVSDNCHHQLNKILADLDQDN 357
            +++  S M H I  PL G+      L  T ++ EQ+    +       L  ++ D+  D 
Sbjct: 994  KMQYLSNMSHEIRTPLIGITGMVSFLLETQMSAEQLSYARIIQQSAKSLLTVINDI-LDL 1052

Query: 358  IMENSSCLDLEMAEFVLQDVVVAAVSQVLIACQGKGIRISCNLPERFMKQLVYGDGIRLQ 537
                +  + L    F ++ ++  A   +      KGI ++  + +  +  +V+GD +R++
Sbjct: 1053 SKVRAGMMKLTSQRFSVRAMMEDANETLGTLAFSKGIELNYTV-DIDVPDIVFGDNMRMR 1111

Query: 538  QI 543
            Q+
Sbjct: 1112 QV 1113

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>IFNAH_BOVIN (P49878) Interferon alpha-H precursor|
          Length = 189

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 402 CVARCGGGCCKPSTDSLPGKRHQNLLQPAREIYEATSL 515
           C A C  GC  P T SLP +R   LL+  R +  ++ L
Sbjct: 16  CNAICSLGCHLPHTHSLPNRRVLTLLRQLRRVSPSSCL 53

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>IFNAB_BOVIN (P05008) Interferon alpha-B precursor|
          Length = 189

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 402 CVARCGGGCCKPSTDSLPGKRHQNLLQPAREIYEATSL 515
           C A C  GC  P T SLP +R   LL+  R +  ++ L
Sbjct: 16  CNAICSLGCHLPHTHSLPNRRVLTLLRQLRRVSPSSCL 53

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>SYP71_ARATH (Q9SF29) Syntaxin-71 (AtSYP71)|
          Length = 266

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 250 ALKN--TDLNEEQMRQIHVSDNCHHQLNKILADLDQDNIMENSSCLDLEMAEFVLQDVVV 423
           ALKN  +D+NEE  RQ+ + D    ++++  +DL   N+    +   L  +     D+V+
Sbjct: 191 ALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRSSRNFCIDIVL 250

Query: 424 AAV 432
             +
Sbjct: 251 LCI 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,707,952
Number of Sequences: 219361
Number of extensions: 1216467
Number of successful extensions: 3580
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3537
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result