| Clone Name | basd16p24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 978 Score = 299 bits (151), Expect = 4e-78 Identities = 245/275 (89%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 167 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttggataaatttggtgctg 226 |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 215 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctg 274 Query: 227 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 286 |||||||| ||||||||||||| ||||| || |||||||||||| |||| || || || | Sbjct: 275 ctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatatt 334 Query: 287 cttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 346 ||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| | Sbjct: 335 cttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaaca 394 Query: 347 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 406 |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 395 agactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatgg 454 Query: 407 acttccttgttgaactgttcccgtaatctgcttga 441 |||||||||||||| | || |||||| |||||||| Sbjct: 455 acttccttgttgaattatt-ccgtaacctgcttga 488
>dbj|AK061679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H10, full insert sequence Length = 978 Score = 291 bits (147), Expect = 1e-75 Identities = 244/275 (88%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 167 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttggataaatttggtgctg 226 |||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 215 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttggataaatttggagctg 274 Query: 227 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 286 |||||||| ||||||||||||| ||||| || |||||||||||| |||| || || || | Sbjct: 275 ctatggcacttgtgaagagtgacattggtggtaatatcacgaggctggaaaataaatatt 334 Query: 287 cttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 346 ||||||||||| ||||||||||||| ||||||| |||||| || ||||| | | |||| | Sbjct: 335 cttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggctcaaaaca 394 Query: 347 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 406 |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct: 395 agactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagggctatgg 454 Query: 407 acttccttgttgaactgttcccgtaatctgcttga 441 |||||||||||||| | || |||||| |||||||| Sbjct: 455 acttccttgttgaattatt-ccgtaacctgcttga 488
>gb|BT024039.1| Zea mays clone EL01N0429A01 mRNA sequence Length = 807 Score = 276 bits (139), Expect = 6e-71 Identities = 242/275 (88%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 167 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttggataaatttggtgctg 226 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| Sbjct: 28 ccaagcccttccttgatgtctgcaagcaaatcttgcctgtcctggataaatttggagctg 87 Query: 227 ctatggcaattgtgaagagtgatattggaggaaatatcacgaggttggagaacaagtact 286 ||||||||||||| |||| |||||| | || |||||||| ||| |||| |||||||| | Sbjct: 88 ctatggcaattgtaaagaatgatatcagcggcaatatcacaaggctggaaaacaagtatt 147 Query: 287 cttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaaga 346 ||||||| ||| |||| |||| |||||||||| |||||| || ||||||||| |||| | Sbjct: 148 cttcagatccatcaaagtatggacacttgtacagcatggttcaggaagaagttcaaaaca 207 Query: 347 agaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagggccatgg 406 ||||||| |||||||| ||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 208 agaccgcgaaaggttcctcaagctgcacaaatggtcttctgtggctcacgagggccatgg 267 Query: 407 acttccttgttgaactgttcccgtaatctgcttga 441 | ||||||||||| |||| |||||| |||||||| Sbjct: 268 atttccttgttgagttgtt-ccgtaacctgcttga 301
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 286 tcttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaag 345 |||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| Sbjct: 24800882 tcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaac 24800941 Query: 346 aagaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 399 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 24800942 aagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 24800995 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 267 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 24800596 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 24800652 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 167 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttgg 211 |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 24800032 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 24800076 Score = 42.1 bits (21), Expect = 1.5 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 397 agggccatggacttccttgttgaactgttcccgtaatctgcttga 441 ||||| |||||||||||||||||| | || |||||| |||||||| Sbjct: 24801074 agggctatggacttccttgttgaattatt-ccgtaacctgcttga 24801117
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 286 tcttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaag 345 |||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| Sbjct: 100530 tcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaac 100589 Query: 346 aagaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 399 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 100590 aagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 100643 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 267 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 100244 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 100300 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 167 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttgg 211 |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 99680 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 99724 Score = 42.1 bits (21), Expect = 1.5 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 397 agggccatggacttccttgttgaactgttcccgtaatctgcttga 441 ||||| |||||||||||||||||| | || |||||| |||||||| Sbjct: 100722 agggctatggacttccttgttgaattatt-ccgtaacctgcttga 100765
>dbj|AP006846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa283G08 Length = 38265 Score = 131 bits (66), Expect = 2e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 286 tcttcagacccagcaaaatatgagcacttgtacaccatggtccaagaagaagttgaaaag 345 |||||||||||| ||||||||||||| ||||||| |||||| || ||||| ||| |||| Sbjct: 4246 tcttcagacccatcaaaatatgagcaattgtacagcatggttcaggaagaggttcaaaac 4305 Query: 346 aagaccgcaaaaggttcatcaagctgcaccaatggacttctatggctcacgagg 399 ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 4306 aagactgcaaaaggttcgtcaagctgcacaaatggacttctgtggctcacgagg 4359 Score = 73.8 bits (37), Expect = 4e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 267 ||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 3960 gataaatttggagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 4016 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 167 ccaagcccttccttgatgtctgcaagcaaatcttacctgtcttgg 211 |||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 3396 ccaagccctttcttgatgtctgcaagcaaatcttgcctgttttgg 3440 Score = 42.1 bits (21), Expect = 1.5 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 397 agggccatggacttccttgttgaactgttcccgtaatctgcttga 441 ||||| |||||||||||||||||| | || |||||| |||||||| Sbjct: 4438 agggctatggacttccttgttgaattatt-ccgtaacctgcttga 4481
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 268 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 16231165 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 16231108
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 268 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 21343 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 21286
>dbj|AK102838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109M01, full insert sequence Length = 2519 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacga 268 ||||||||| | |||||||||||| ||||||||||||| ||||| || |||||||||| Sbjct: 1837 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacga 1894
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 267 ||||||||| | |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 21531134 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 21531190 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 gctgctatggcaattgtgaagagtg 247 |||||||||||| |||||||||||| Sbjct: 13742624 gctgctatggcacttgtgaagagtg 13742600
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 211 gataaatttggtgctgctatggcaattgtgaagagtgatattggaggaaatatcacg 267 ||||||||| | |||||||||||| ||||||||||||| ||||| || ||||||||| Sbjct: 88318 gataaatttagagctgctatggcacttgtgaagagtgacattggtggtaatatcacg 88374
>ref|NM_179950.1| Arabidopsis thaliana ATP binding / microtubule motor AT2G37420 mRNA, complete cds Length = 3429 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 caagaagaagttgaaaagaag 348 ||||||||||||||||||||| Sbjct: 1443 caagaagaagttgaaaagaag 1463
>gb|AC120404.25| Mus musculus chromosome 6, clone RP24-405O23, complete sequence Length = 202146 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 tatgagcacttgtacaccatg 324 ||||||||||||||||||||| Sbjct: 98463 tatgagcacttgtacaccatg 98483
>gb|AC133089.4| Mus musculus BAC clone RP24-165M3 from chromosome 19, complete sequence Length = 149637 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 gtccaagaagaagttgaaaag 345 ||||||||||||||||||||| Sbjct: 81861 gtccaagaagaagttgaaaag 81841
>gb|AC130819.4| Mus musculus BAC clone RP23-118O2 from chromosome 19, complete sequence Length = 223575 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 gtccaagaagaagttgaaaag 345 ||||||||||||||||||||| Sbjct: 20135 gtccaagaagaagttgaaaag 20115
>gb|AE014303.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 3 of 3 of the complete sequence Length = 209806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 tggcaattgtgaagagtgata 250 ||||||||||||||||||||| Sbjct: 168018 tggcaattgtgaagagtgata 167998
>emb|AL512629.7| Human DNA sequence from clone RP11-564N10 on chromosome 13 Contains the 5' end of the FGF14 gene for fibroblast growth factor 14, a lipoyltransferase (LOC51601) pseudogene and a CpG island, complete sequence Length = 188696 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 tggcaattgtgaagagtgata 250 ||||||||||||||||||||| Sbjct: 18913 tggcaattgtgaagagtgata 18893
>emb|X71621.1|SCELM1AA S.cerevisiae genes ELM1 and PRI2 Length = 17564 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 12411 aagaagaagttgaaaagaaga 12391
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 aagaagttgaaaagaagaccg 352 ||||||||||||||||||||| Sbjct: 596182 aagaagttgaaaagaagaccg 596202
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 caagaagaagttgaaaagaag 348 ||||||||||||||||||||| Sbjct: 71403 caagaagaagttgaaaagaag 71423
>dbj|AP004679.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021N09 Length = 156565 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 gctgctatggcaattgtgaagagtg 247 |||||||||||| |||||||||||| Sbjct: 149957 gctgctatggcacttgtgaagagtg 149933
>dbj|AK105492.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C02, full insert sequence Length = 1753 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 223 gctgctatggcaattgtgaagagtg 247 |||||||||||| |||||||||||| Sbjct: 1469 gctgctatggcacttgtgaagagtg 1493
>emb|Z28044.1|SCYKL044W S.cerevisiae chromosome XI reading frame ORF YKL044w Length = 1668 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 1595 aagaagaagttgaaaagaaga 1575
>emb|Z28043.1|SCYKL043W S.cerevisiae chromosome XI reading frame ORF YKL043w Length = 1832 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 32 aagaagaagttgaaaagaaga 12
>gb|AY949948.1| Saccharomyces cerevisiae strain YPS610 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949947.1| Saccharomyces cerevisiae strain YPS608 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949946.1| Saccharomyces cerevisiae strain YPS606 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949945.1| Saccharomyces cerevisiae strain YPS604 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949944.1| Saccharomyces cerevisiae strain YPS602 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949943.1| Saccharomyces cerevisiae strain YPS600 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949942.1| Saccharomyces cerevisiae strain YPS598 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949941.1| Saccharomyces cerevisiae strain YPS400 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949940.1| Saccharomyces cerevisiae strain YPS396 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949939.1| Saccharomyces cerevisiae strain YPH499 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949938.1| Saccharomyces cerevisiae strain Sgu52F PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949937.1| Saccharomyces cerevisiae strain Sgu52E PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949936.1| Saccharomyces cerevisiae strain ORM1-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949935.1| Saccharomyces cerevisiae strain MMW1-15h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949934.1| Saccharomyces cerevisiae strain MMW1-15 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949933.1| Saccharomyces cerevisiae strain MMW1-12 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949932.1| Saccharomyces cerevisiae strain MMW1-2h2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949931.1| Saccharomyces cerevisiae strain MMW1-2 PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949930.1| Saccharomyces cerevisiae strain MMR2-5 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949929.1| Saccharomyces cerevisiae strain MM@2-3 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949928.1| Saccharomyces cerevisiae strain MMR2-1 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949927.1| Saccharomyces cerevisiae strain M7-8D PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949926.1| Saccharomyces cerevisiae strain M5-7B PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949925.1| Saccharomyces cerevisiae strain M5-7A PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949924.1| Saccharomyces cerevisiae strain M2-8 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949923.1| Saccharomyces cerevisiae strain M1-2A PHD1 gene, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 49 aagaagaagttgaaaagaaga 29
>gb|AY949922.1| Saccharomyces cerevisiae strain Fy93,5a PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949921.1| Saccharomyces cerevisiae strain Bb32(5) PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|AY949920.1| Saccharomyces cerevisiae strain Ba194 PHD1 gene, complete cds Length = 1267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 46 aagaagaagttgaaaagaaga 26
>gb|U05241.1|SCU05241 Saccharomyces cerevisiae strain YPH1 putative transcription factor Phd1p (PHD1) gene, complete cds Length = 2020 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaaga 349 ||||||||||||||||||||| Sbjct: 627 aagaagaagttgaaaagaaga 607
>ref|NM_119452.3| Arabidopsis thaliana ATH1 (ARABIDOPSIS THALIANA HOMEOBOX GENE 1); transcription factor AT4G32980 (ATH1) mRNA, complete cds Length = 2268 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 345 aagaagaagttgaaaagaag 326
>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence Length = 156084 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aattgtgaagagtgatattg 253 |||||||||||||||||||| Sbjct: 147038 aattgtgaagagtgatattg 147057
>gb|AC151368.3| Aotus nancymaae clone CH258-251O19, complete sequence Length = 189563 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tttggaagggatgaaccatgtcag 143 |||||| ||||||||||||||||| Sbjct: 76264 tttggatgggatgaaccatgtcag 76287
>ref|NM_187035.1| Oryza sativa (japonica cultivar-group), mRNA Length = 609 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 gccatggacttccttgttgaactgttcc 427 |||||||||||||| |||| |||||||| Sbjct: 307 gccatggacttcctggttgcactgttcc 334
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tttggaagggatgaaccatgtcag 143 |||||| ||||||||||||||||| Sbjct: 1565176 tttggatgggatgaaccatgtcag 1565199
>gb|AE013187.1| Thermoanaerobacter tengcongensis MB4, section 214 of 244 of the complete genome Length = 11851 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 agaagaagttgaaaagaaga 349 |||||||||||||||||||| Sbjct: 10472 agaagaagttgaaaagaaga 10453
>gb|AC131784.4| Mus musculus BAC clone RP24-391G14 from chromosome 7, complete sequence Length = 175150 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 caagaagaagttgaaaagaa 347 |||||||||||||||||||| Sbjct: 65724 caagaagaagttgaaaagaa 65743
>ref|XM_646996.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (133.t00008) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 44 aagaagaagttgaaaagaag 63
>emb|AL008733.10|HS163G9 Human DNA sequence from clone RP1-163G9 on chromosome 1p36.2-36.3 Contains two novel genes, the 5' end of the PRDM16 gene for PR domain containing 16 and two CpG islands, complete sequence Length = 143291 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cctctctcctgcagttccct 22 |||||||||||||||||||| Sbjct: 86427 cctctctcctgcagttccct 86446
>emb|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 Contains a calmodulin 2 (phosphorylase kinase, delta) (CALM2) pseudogene, complete sequence Length = 139444 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 atattggaggaaatatcacgaggt 271 ||||||||||||||||||| |||| Sbjct: 95288 atattggaggaaatatcacaaggt 95311
>emb|Z83320.1|ATZ83320 A.thaliana partial ATH1 gene Length = 10072 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 8560 aagaagaagttgaaaagaag 8541
>emb|X80127.1|ATHIGEN A.thaliana AtH1 gene Length = 4878 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 1654 aagaagaagttgaaaagaag 1635
>gb|AY072174.1| Arabidopsis thaliana putative homeobox gene ATH1 protein (At4g32980) mRNA, complete cds Length = 2277 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 347 aagaagaagttgaaaagaag 328
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 ccgcaaaaggttcatcaagc 369 |||||||||||||||||||| Sbjct: 1483808 ccgcaaaaggttcatcaagc 1483789
>emb|AL161582.2|ATCHRIV78 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 78 Length = 198669 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 139456 aagaagaagttgaaaagaag 139475
>emb|AL031804.1|ATF26P21 Arabidopsis thaliana DNA chromosome 4, BAC clone F26P21 (ESSA project) Length = 94482 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 48760 aagaagaagttgaaaagaag 48779
>gb|AC148057.3| Callicebus moloch clone LB5-121J11, complete sequence Length = 152135 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tttggaagggatgaaccatgtcag 143 |||||| ||||||||||||||||| Sbjct: 46189 tttggatgggatgaaccatgtcag 46212
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 aggttcatcaagctgcacca 376 |||||||||||||||||||| Sbjct: 3543780 aggttcatcaagctgcacca 3543799
>gb|AC146883.3| Callithrix jacchus clone CH259-225J7, complete sequence Length = 216802 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tttggaagggatgaaccatgtcag 143 |||||| ||||||||||||||||| Sbjct: 36785 tttggatgggatgaaccatgtcag 36808
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 gccatggacttccttgttgaactgttcc 427 |||||||||||||| |||| |||||||| Sbjct: 15168568 gccatggacttcctggttgcactgttcc 15168595
>emb|BX826894.1|CNS0A4MQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2123 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaagaagttgaaaagaag 348 |||||||||||||||||||| Sbjct: 203 aagaagaagttgaaaagaag 184
>dbj|AP006346.1| Marsupenaeus japonicus mitochondrial DNA, complete genome Length = 15968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gagtgatattggaggaaata 262 |||||||||||||||||||| Sbjct: 1182 gagtgatattggaggaaata 1163
>gb|AC084571.1|CBRG39J22 Caenorhabditis briggsae cosmid G39J22, complete sequence Length = 41637 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 atggtccaagaagaagttga 341 |||||||||||||||||||| Sbjct: 13773 atggtccaagaagaagttga 13754
>gb|AC116849.11| Mus musculus chromosome 19, clone RP24-395F1, complete sequence Length = 168486 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aattgtgaagagtgatattg 253 |||||||||||||||||||| Sbjct: 22516 aattgtgaagagtgatattg 22535
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 400 gccatggacttccttgttgaactgttcc 427 |||||||||||||| |||| |||||||| Sbjct: 35317 gccatggacttcctggttgcactgttcc 35344
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 tttggaagggatgaaccatgtcag 143 |||||| ||||||||||||||||| Sbjct: 1543915 tttggatgggatgaaccatgtcag 1543938
>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete sequence Length = 210185 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tgatattggaggaaatatca 265 |||||||||||||||||||| Sbjct: 114759 tgatattggaggaaatatca 114778 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,396,122 Number of Sequences: 3902068 Number of extensions: 3396122 Number of successful extensions: 61026 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60770 Number of HSP's gapped (non-prelim): 256 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)