ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16p21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105822.1| Zea mays PCO122996 mRNA sequence Length = 1660 Score = 539 bits (272), Expect = e-150 Identities = 470/536 (87%) Strand = Plus / Plus Query: 77 caccgcctcctcgcgctctcctcgctgctcctgctcgcctccggggaggtcatcttcgag 136 |||||||||||||| ||||| |||||||| || ||||| ||||| |||||| |||||||| Sbjct: 107 caccgcctcctcgccctctcgtcgctgctgctcctcgcttccggcgaggtcgtcttcgag 166 Query: 137 gagcggttcgaagatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaa 196 ||||| |||||||||||||||||||| || |||||| ||||||| ||||||||||| ||| Sbjct: 167 gagcgcttcgaagatggttgggagactcggtgggtggaatccgactggaaaaggagtgaa 226 Query: 197 gggaaagccggtacattcaagcacacggcagggaaatattctggggatcctgatgacaaa 256 |||||||| || | ||||||||||| || |||| ||| |||| ||||||||||||||| Sbjct: 227 gggaaagcaggaaggttcaagcacacagcggggagatactctgcagatcctgatgacaaa 286 Query: 257 ggcattcaaacaacgatagatgctaggcattttgccatctcagccaagataccggagttc 316 || || |||||||| |||||||| || |||||||| |||||||||||| | ||||| ||| Sbjct: 287 ggaatacaaacaacaatagatgccagacattttgctatctcagccaagttcccggaattc 346 Query: 317 agtaacaagggccgaacattggtggtccagtactccataaagtttgagcaggaaattgaa 376 ||||||||| ||| || | ||||||||||||||||| |||||||||||||| |||||| Sbjct: 347 agtaacaagaaccggacgcttgtggtccagtactccattaagtttgagcaggatattgaa 406 Query: 377 tgtggcggcggctatattaagctaatgtctggttatgtcaatcagaagaaatatagtgga 436 |||||||| |||||||||||||| ||||| ||||||||||| ||||| |||| |||||| Sbjct: 407 tgtggcggtggctatattaagcttatgtccggttatgtcaaccagaaaaaatttagtggg 466 Query: 437 gacactccatacagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctg 496 |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 467 gacactccgtacagcttgatgtttggaccagatatatgtggtactcaaacaaagaagctc 526 Query: 497 catcttatactctcttaccaggggcagaactatcctatcaaaaaagatctacaatgcgaa 556 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| || Sbjct: 527 catcttatactctcttaccaggggcagaactatcccatcaaaaaagatctagaatgtgag 586 Query: 557 accgacaggctcacgcatgtttacacattcattcttaggcccgatgcatcttatag 612 || |||| | | || || || || || |||||||||||||| |||||||||||||| Sbjct: 587 acggacaagttaacacacgtgtatactttcattcttaggcctgatgcatcttatag 642
>ref|NM_190260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1278 Score = 537 bits (271), Expect = e-149 Identities = 454/515 (88%) Strand = Plus / Plus Query: 98 tcgctgctcctgctcgcctccggggaggtcatcttcgaggagcggttcgaagatggttgg 157 ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 58 tcgctgctcctcatcgccgccggggaggtcatcttcgaggagcgcttcgaagatggttgg 117 Query: 158 gagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattcaag 217 ||| | || |||||||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 118 gagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctggaacgttcaaa 177 Query: 218 cacacggcagggaaatattctggggatcctgatgacaaaggcattcaaacaacgatagat 277 ||||||||||| | ||||||||| ||||||||||||||||| || || |||||| | || Sbjct: 178 cacacggcaggaagatattctggagatcctgatgacaaaggtatacagacaacgttggac 237 Query: 278 gctaggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattg 337 || ||||||||||| || || |||||||| || || ||||||||||||||||| |||||| Sbjct: 238 gccaggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattg 297 Query: 338 gtggtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaag 397 || ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 298 gtactccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaa 357 Query: 398 ctaatgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatg 457 || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct: 358 cttatgtctggttatgtcaaccagaagaaatttagtggagacactccatacagcttaatg 417 Query: 458 tttgggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccag 517 |||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| || Sbjct: 418 tttgggccagatatatgcggaactcaaacgaagaagctccatcttatactttcttatcaa 477 Query: 518 gggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggctcacgcatgtt 577 ||||||||||| |||||||| |||||||| ||||| ||||| |||| | | ||||||||| Sbjct: 478 gggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagttgacgcatgtt 537 Query: 578 tacacattcattcttaggcccgatgcatcttatag 612 ||||||||||| || ||||| ||||| || ||||| Sbjct: 538 tacacattcatactaaggcctgatgcgtcctatag 572
>dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B02, full insert sequence Length = 1784 Score = 537 bits (271), Expect = e-149 Identities = 454/515 (88%) Strand = Plus / Plus Query: 98 tcgctgctcctgctcgcctccggggaggtcatcttcgaggagcggttcgaagatggttgg 157 ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 113 tcgctgctcctcatcgccgccggggaggtcatcttcgaggagcgcttcgaagatggttgg 172 Query: 158 gagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattcaag 217 ||| | || |||||||| || |||||||||||||||||||||||||| || || ||||| Sbjct: 173 gagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctggaacgttcaaa 232 Query: 218 cacacggcagggaaatattctggggatcctgatgacaaaggcattcaaacaacgatagat 277 ||||||||||| | ||||||||| ||||||||||||||||| || || |||||| | || Sbjct: 233 cacacggcaggaagatattctggagatcctgatgacaaaggtatacagacaacgttggac 292 Query: 278 gctaggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattg 337 || ||||||||||| || || |||||||| || || ||||||||||||||||| |||||| Sbjct: 293 gccaggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattg 352 Query: 338 gtggtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaag 397 || ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 353 gtactccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaa 412 Query: 398 ctaatgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatg 457 || ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct: 413 cttatgtctggttatgtcaaccagaagaaatttagtggagacactccatacagcttaatg 472 Query: 458 tttgggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccag 517 |||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| || Sbjct: 473 tttgggccagatatatgcggaactcaaacgaagaagctccatcttatactttcttatcaa 532 Query: 518 gggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggctcacgcatgtt 577 ||||||||||| |||||||| |||||||| ||||| ||||| |||| | | ||||||||| Sbjct: 533 gggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagttgacgcatgtt 592 Query: 578 tacacattcattcttaggcccgatgcatcttatag 612 ||||||||||| || ||||| ||||| || ||||| Sbjct: 593 tacacattcatactaaggcctgatgcgtcctatag 627
>ref|XM_475503.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1407 Score = 303 bits (153), Expect = 4e-79 Identities = 417/505 (82%) Strand = Plus / Plus Query: 115 ctccggggaggtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaa 174 |||||| || ||||||||||||||||| ||||| |||| ||||| | | |||||||| Sbjct: 75 ctccggcgaagtcatcttcgaggagcgattcgatgatgattggggaagcagatgggtgaa 134 Query: 175 atccgattggaaaaggagcgaagggaaagccggtacattcaagcacacggcagggaaata 234 ||| || ||||||| |||||||||||||||||| |||||||| || || ||||||| || Sbjct: 135 atctgactggaaaaagagcgaagggaaagccgggacattcaaacatacagcagggagcta 194 Query: 235 ttctggggatcctgatgacaaaggcattcaaacaacgatagatgctaggcattttgccat 294 |||||| |||||||| || | ||| || |||||||| ||||||| ||||||||| || Sbjct: 195 ttctggagatcctgacgatagaggtatacaaacaacctcggatgctaagcattttgctat 254 Query: 295 ctcagccaagataccggagttcagtaacaagggccgaacattggtggtccagtactccat 354 || |||||| | || || |||||||||||| ||| ||||||||||| ||||| || || Sbjct: 255 atcggccaagttcccagaattcagtaacaagaaccggacattggtggttcagtattcgat 314 Query: 355 aaagtttgagcaggaaattgaatgtggcggcggctatattaagctaatgtctggttatgt 414 |||| |||||||||| ||||||||||| || | ||||| ||||| |||||||| ||||| Sbjct: 315 aaagattgagcaggatattgaatgtggtggtgcttatatcaagcttatgtctggctatgt 374 Query: 415 caatcagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatg 474 ||||||||||||| | | || |||||||| || ||||| ||||||||||| |||||||| Sbjct: 375 gaatcagaagaaatttggcggtgacactccttatagcttcatgtttgggcctgatatatg 434 Query: 475 cgggactcaaacaaagaagctgcatcttatactctcttaccaggggcagaactatcctat 534 || ||| |||||||| || ||||| ||||| |||||||| ||||| ||||| ||||| Sbjct: 435 tggtgatcagacaaagaaactccatctgatactgtcttaccaagggcaaaactaccctat 494 Query: 535 caaaaaagatctacaatgcgaaaccgacaggctcacgcatgtttacacattcattcttag 594 || |||||||| |||| ||||| |||| | | || ||| ||||||||||||||||||| Sbjct: 495 aaagaaagatctgaaatgtgaaactgacaagttgacacatttttacacattcattcttag 554 Query: 595 gcccgatgcatcttatagtttactt 619 ||| ||||| ||||||||| ||||| Sbjct: 555 gccagatgcctcttatagtctactt 579
>dbj|AK060834.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C08, full insert sequence Length = 1481 Score = 222 bits (112), Expect = 1e-54 Identities = 325/396 (82%) Strand = Plus / Plus Query: 224 gcagggaaatattctggggatcctgatgacaaaggcattcaaacaacgatagatgctagg 283 ||||||| |||||||| |||||||| || | ||| || |||||||| ||||||| | Sbjct: 6 gcagggagctattctggagatcctgacgatagaggtatacaaacaacctcggatgctaag 65 Query: 284 cattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtggtc 343 |||||||| || || |||||| | || || |||||||||||| ||| ||||||||||| Sbjct: 66 cattttgctatatcggccaagttcccagaattcagtaacaagaaccggacattggtggtt 125 Query: 344 cagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagctaatg 403 ||||| || |||||| |||||||||| ||||||||||| || | ||||| ||||| ||| Sbjct: 126 cagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatcaagcttatg 185 Query: 404 tctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgtttggg 463 ||||| ||||| ||||||||||| | | | || |||||||| || ||||| ||||||||| Sbjct: 186 tctggctatgtgaatcagaagaagtttggcggtgacactccttatagcttcatgtttggg 245 Query: 464 ccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccaggggcag 523 || |||||||| || ||| |||||||| || ||||| ||||| |||||||| ||||| Sbjct: 246 cctgatatatgtggtgatcagacaaagaaactccatctgatactgtcttaccaagggcaa 305 Query: 524 aactatcctatcaaaaaagatctacaatgcgaaaccgacaggctcacgcatgtttacaca 583 ||||| ||||| || |||||||| |||| ||||| |||| | | || ||| |||||||| Sbjct: 306 aactaccctataaagaaagatctgaaatgtgaaactgacaagttgacacatttttacaca 365 Query: 584 ttcattcttaggcccgatgcatcttatagtttactt 619 |||||||||||||| ||||| ||||||||| ||||| Sbjct: 366 ttcattcttaggccagatgcctcttatagtctactt 401
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 281 aggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtg 340 ||||||||||| || || |||||||| || || ||||||||||||||||| |||||||| Sbjct: 38926835 aggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggta 38926776 Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| || Sbjct: 38926775 ctccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaactt 38926716 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacag 450 ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 38926715 atgtctggttatgtcaaccagaagaaatttagtggagacactccatacag 38926666 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 448 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 507 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 38926461 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 38926402 Query: 508 ctcttaccaggggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggct 567 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| |||| | | Sbjct: 38926401 ttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagtt 38926342 Query: 568 cacgcatgtttacacattcattcttaggcccgatgcatcttatag 612 |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 38926341 gacgcatgtttacacattcatactaaggcctgatgcgtcctatag 38926297 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 148 agatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccgg 207 ||||||||||||| | || |||||||| || |||||||||||||||||||||||||| || Sbjct: 38927100 agatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctgg 38927041 Query: 208 tacattcaagcacacggcagggaaatattctggggatcctgatgacaaagg 258 || ||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 38927040 aacgttcaaacacacggcaggaagatattctggagatcctgatgacaaagg 38926990 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 98 tcgctgctcctgctcgcctccggggaggtcatcttcgaggagcggttcgaag 149 ||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 38927900 tcgctgctcctcatcgccgccggggaggtcatcttcgaggagcgcttcgaag 38927849
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 281 aggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtg 340 ||||||||||| || || |||||||| || || ||||||||||||||||| |||||||| Sbjct: 468 aggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggta 409 Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| || Sbjct: 408 ctccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaactt 349 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacag 450 ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 348 atgtctggttatgtcaaccagaagaaatttagtggagacactccatacag 299 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 148 agatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccgg 207 ||||||||||||| | || |||||||| || |||||||||||||||||||||||||| || Sbjct: 733 agatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctgg 674 Query: 208 tacattcaagcacacggcagggaaatattctggggatcctgatgacaaagg 258 || ||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 673 aacgttcaaacacacggcaggaagatattctggagatcctgatgacaaagg 623 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Minus Query: 448 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 507 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 94 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 35 Query: 508 ctcttaccaggggcagaactatcctatcaa 537 ||||| || ||||||||||| |||||||| Sbjct: 34 ttcttatcaagggcagaactaccctatcaa 5 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 98 tcgctgctcctgctcgcctccggggaggtcatcttcgaggagcggttcgaag 149 ||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 1533 tcgctgctcctcatcgccgccggggaggtcatcttcgaggagcgcttcgaag 1482
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 281 aggcattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtg 340 ||||||||||| || || |||||||| || || ||||||||||||||||| |||||||| Sbjct: 91621 aggcattttgctatatcggccaagatccccgaattcagtaacaagggccgtacattggta 91562 Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||| |||||||||||||||||||| ||||||||||| || || |||||||| || Sbjct: 91561 ctccagtattccataaagtttgagcaggatattgaatgtggtggtggatatattaaactt 91502 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacag 450 ||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 91501 atgtctggttatgtcaaccagaagaaatttagtggagacactccatacag 91452 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 448 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 507 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 91247 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 91188 Query: 508 ctcttaccaggggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggct 567 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| |||| | | Sbjct: 91187 ttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagtt 91128 Query: 568 cacgcatgtttacacattcattcttaggcccgatgcatcttatag 612 |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 91127 gacgcatgtttacacattcatactaaggcctgatgcgtcctatag 91083 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 148 agatggttgggagacacgttgggtgaaatccgattggaaaaggagcgaagggaaagccgg 207 ||||||||||||| | || |||||||| || |||||||||||||||||||||||||| || Sbjct: 91886 agatggttgggagtcccgctgggtgaagtctgattggaaaaggagcgaagggaaagctgg 91827 Query: 208 tacattcaagcacacggcagggaaatattctggggatcctgatgacaaagg 258 || ||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 91826 aacgttcaaacacacggcaggaagatattctggagatcctgatgacaaagg 91776 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 98 tcgctgctcctgctcgcctccggggaggtcatcttcgaggagcggttcgaag 149 ||||||||||| ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 92686 tcgctgctcctcatcgccgccggggaggtcatcttcgaggagcgcttcgaag 92635
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 168 bits (85), Expect = 1e-38 Identities = 145/165 (87%) Strand = Plus / Minus Query: 448 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 507 |||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 199343 cagcttaatgtttgggccagatatatgcggaactcaaacgaagaagctccatcttatact 199284 Query: 508 ctcttaccaggggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggct 567 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| |||| | | Sbjct: 199283 ttcttatcaagggcagaactaccctatcaagaaagatctgcaatgtgaaacagacaagtt 199224 Query: 568 cacgcatgtttacacattcattcttaggcccgatgcatcttatag 612 |||||||||||||||||||| || ||||| ||||| || ||||| Sbjct: 199223 gacgcatgtttacacattcatactaaggcctgatgcgtcctatag 199179
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 448 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 507 |||||| ||||||||||| |||||||| || ||| |||||||| || ||||| ||||| Sbjct: 42774 cagcttcatgtttgggcctgatatatgtggtgatcagacaaagaaactccatctgatact 42833 Query: 508 ctcttaccaggggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggct 567 |||||||| ||||| ||||| ||||| || |||||||| |||| ||||| |||| | | Sbjct: 42834 gtcttaccaagggcaaaactaccctataaagaaagatctgaaatgtgaaactgacaagtt 42893 Query: 568 cacgcatgtttacacattcattcttaggcccgatgcatcttatagtttactt 619 || ||| |||||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 42894 gacacatttttacacattcattcttaggccagatgcctcttatagtctactt 42945 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Plus Query: 275 gatgctaggcattttgccatctcagccaagataccggagttcagtaacaagggccgaaca 334 ||||||| ||||||||| || || |||||| | || || |||||||||||| ||| ||| Sbjct: 42142 gatgctaagcattttgctatatcggccaagttcccagaattcagtaacaagaaccggaca 42201 Query: 335 ttggtggtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatatt 394 |||||||| ||||| || |||||| |||||||||| ||||||||||| || | ||||| Sbjct: 42202 ttggtggttcagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatc 42261 Query: 395 aagctaatgtctggttatgtcaatcagaagaaat 428 ||||| |||||||| ||||| ||||||||||||| Sbjct: 42262 aagcttatgtctggctatgtgaatcagaagaaat 42295 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 167 tgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattcaagcacacggca 226 ||||||||||| || ||||||| |||||||||||||||||| |||||||| || || ||| Sbjct: 41860 tgggtgaaatctgactggaaaaagagcgaagggaaagccgggacattcaaacatacagca 41919 Query: 227 gggaaatattctggggatcctga 249 |||| |||||||| |||||||| Sbjct: 41920 gggagctattctggagatcctga 41942 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 115 ctccggggaggtcatcttcgaggagcggttcga 147 |||||| || ||||||||||||||||| ||||| Sbjct: 41421 ctccggcgaagtcatcttcgaggagcgattcga 41453
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 119 bits (60), Expect = 1e-23 Identities = 144/172 (83%) Strand = Plus / Plus Query: 448 cagcttgatgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatact 507 |||||| ||||||||||| |||||||| || ||| |||||||| || ||||| ||||| Sbjct: 24855889 cagcttcatgtttgggcctgatatatgtggtgatcagacaaagaaactccatctgatact 24855948 Query: 508 ctcttaccaggggcagaactatcctatcaaaaaagatctacaatgcgaaaccgacaggct 567 |||||||| ||||| ||||| ||||| || |||||||| |||| ||||| |||| | | Sbjct: 24855949 gtcttaccaagggcaaaactaccctataaagaaagatctgaaatgtgaaactgacaagtt 24856008 Query: 568 cacgcatgtttacacattcattcttaggcccgatgcatcttatagtttactt 619 || ||| |||||||||||||||||||||| ||||| ||||||||| ||||| Sbjct: 24856009 gacacatttttacacattcattcttaggccagatgcctcttatagtctactt 24856060 Score = 115 bits (58), Expect = 2e-22 Identities = 130/154 (84%) Strand = Plus / Plus Query: 275 gatgctaggcattttgccatctcagccaagataccggagttcagtaacaagggccgaaca 334 ||||||| ||||||||| || || |||||| | || || |||||||||||| ||| ||| Sbjct: 24855257 gatgctaagcattttgctatatcggccaagttcccagaattcagtaacaagaaccggaca 24855316 Query: 335 ttggtggtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatatt 394 |||||||| ||||| || |||||| |||||||||| ||||||||||| || | ||||| Sbjct: 24855317 ttggtggttcagtattcgataaagattgagcaggatattgaatgtggtggtgcttatatc 24855376 Query: 395 aagctaatgtctggttatgtcaatcagaagaaat 428 ||||| |||||||| ||||| ||||||||||||| Sbjct: 24855377 aagcttatgtctggctatgtgaatcagaagaaat 24855410 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 167 tgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattcaagcacacggca 226 ||||||||||| || ||||||| |||||||||||||||||| |||||||| || || ||| Sbjct: 24854975 tgggtgaaatctgactggaaaaagagcgaagggaaagccgggacattcaaacatacagca 24855034 Query: 227 gggaaatattctggggatcctga 249 |||| |||||||| |||||||| Sbjct: 24855035 gggagctattctggagatcctga 24855057 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 115 ctccggggaggtcatcttcgaggagcggttcga 147 |||||| || ||||||||||||||||| ||||| Sbjct: 24854536 ctccggcgaagtcatcttcgaggagcgattcga 24854568
>ref|NM_100718.2| Arabidopsis thaliana CRT3 (CALRETICULIN 3); calcium ion binding AT1G08450 (CRT3) transcript variant AT1G08450.1 mRNA, complete cds Length = 1469 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||||||| | ||| |||| || || ||||||||||| || | || |||||||| Sbjct: 329 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 388 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 460 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 389 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 448 Query: 461 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 520 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 449 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 508 Query: 521 cagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 509 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 551
>gb|AY056320.1| Arabidopsis thaliana putative calreticulin protein (At1g08450) mRNA, complete cds Length = 1462 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||||||| | ||| |||| || || ||||||||||| || | || |||||||| Sbjct: 329 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 388 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 460 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 389 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 448 Query: 461 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 520 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 449 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 508 Query: 521 cagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 509 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 551
>emb|BX815527.1|CNS0AATS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||||||| | ||| |||| || || ||||||||||| || | || |||||||| Sbjct: 316 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 375 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 460 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 376 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 435 Query: 461 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 520 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 436 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 495 Query: 521 cagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 496 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 538
>gb|BT002494.1| Arabidopsis thaliana calreticulin, putative (At1g08450) mRNA, complete cds Length = 1426 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||||||| | ||| |||| || || ||||||||||| || | || |||||||| Sbjct: 329 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 388 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 460 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 389 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 448 Query: 461 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 520 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 449 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 508 Query: 521 cagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 509 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 551
>gb|U66345.1|ATU66345 Arabidopsis thaliana calreticulin (Crt3) mRNA, complete cds Length = 1424 Score = 85.7 bits (43), Expect = 2e-13 Identities = 178/223 (79%) Strand = Plus / Plus Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||||||| | ||| |||| || || ||||||||||| || | || |||||||| Sbjct: 326 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaagctc 385 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 460 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 386 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 445 Query: 461 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 520 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 446 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 505 Query: 521 cagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 506 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 548
>emb|BX815781.1|CNS0ACTU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1391 Score = 77.8 bits (39), Expect = 4e-11 Identities = 177/223 (79%) Strand = Plus / Plus Query: 341 gtccagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagcta 400 ||||||||||| | ||| |||| || || ||||||||||| || | || ||||| || Sbjct: 314 gtccagtactcagtcaagattgaacaagacattgaatgtggtggtgcttacattaatctc 373 Query: 401 atgtctggttatgtcaatcagaagaaatatagtggagacactccatacagcttgatgttt 460 ||||||| ||||| || |||||| | | | |||| || ||||||||||| | |||||| Sbjct: 374 ctgtctggctatgttaaccagaagcagtttggtggtgatactccatacagtctaatgttt 433 Query: 461 gggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttaccagggg 520 || |||||||||||||| || || || |||||||| ||| ||||| | || || ||||| Sbjct: 434 ggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatatcaggga 493 Query: 521 cagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 494 cagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 536
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence Length = 113361 Score = 69.9 bits (35), Expect = 9e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 164 cgttgggtgaaatccgattggaaaaggagcgaagggaaagccggtacattcaagcacacg 223 |||||||| | ||| || |||||||| |||||||| ||||||||| | |||||||||||| Sbjct: 104357 cgttgggtaagatcagactggaaaagtagcgaaggcaaagccggttcgttcaagcacacg 104416 Query: 224 gcagggaaatattctggggatcctgatgacaaagg 258 || ||||||| |||| ||||| ||||| ||||| Sbjct: 104417 gctgggaaatgggctggagatccagatgataaagg 104451 Score = 58.0 bits (29), Expect = 4e-05 Identities = 116/145 (80%) Strand = Plus / Plus Query: 284 cattttgccatctcagccaagataccggagttcagtaacaagggccgaacattggtggtc 343 |||||||||||||| || |||||||| || |||||||||||| | ||||| | || || Sbjct: 105003 cattttgccatctctgcaaagataccagaattcagtaacaagaacagaacactagtcttc 105062 Query: 344 cagtactccataaagtttgagcaggaaattgaatgtggcggcggctatattaagctaatg 403 ||||| || ||||| ||||| || || ||||| ||||| || || ||||| ||||| | Sbjct: 105063 cagtattctataaaatttgaacaagagattgagtgtggtggaggttatatgaagctcctc 105122 Query: 404 tctggttatgtcaatcagaagaaat 428 ||||| | ||| |||||||| |||| Sbjct: 105123 tctggatttgttaatcagaaaaaat 105147
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Minus Query: 455 atgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttac 514 |||||||| |||||||||||||| || || || |||||||| ||| ||||| | || || Sbjct: 51247 atgtttggaccagatatatgcggaacacagacgaagaagcttcatgttatagtttcatat 51188 Query: 515 caggggcagaactatcctatcaaaaaagatctacaatgcgaaaccgaca 563 ||||| ||||| ||||| |||||||| ||| | ||||| ||||| |||| Sbjct: 51187 cagggacagaattatccaatcaaaaaggatttgcaatgtgaaacagaca 51139
>ref|NM_001036122.1| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.2 mRNA, complete cds Length = 1444 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 406 ggagacactccttacagcattatgtttgggccagatat 443
>ref|NM_104513.2| Arabidopsis thaliana CRT1 (CALRETICULIN 1); calcium ion binding AT1G56340 (CRT1) transcript variant AT1G56340.1 mRNA, complete cds Length = 1492 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 406 ggagacactccttacagcattatgtttgggccagatat 443
>gb|DQ455584.1| Phaseolus vulgaris calreticulin mRNA, partial cds Length = 339 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 123 aggtcatcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgatt 182 ||||| ||||||||||||| |||||||| || ||||| | || ||||| ||||| |||| Sbjct: 80 aggtcttcttcgaggagcgcttcgaagacggatgggaaaatcggtgggttaaatcagatt 139 Query: 183 ggaaaa 188 |||||| Sbjct: 140 ggaaaa 145
>gb|AF083783.1| Arabidopsis thaliana clone sps818 unknown mRNA Length = 1251 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 382 ggagacactccttacagcattatgtttgggccagatat 419
>emb|AJ002057.1|BVMRNAC Beta vulgaris mRNA for calreticulin Length = 1564 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 129 tcttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgattggaa 186 |||||||||| || ||||||||||| ||||||| |||||||| ||||| || ||||| Sbjct: 102 tcttcgaggaacgtttcgaagatggatgggagaagcgttgggtcaaatctgaatggaa 159
>gb|BT008511.1| Arabidopsis thaliana At1g56340 gene, complete cds Length = 1278 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 379 ggagacactccttacagcattatgtttgggccagatat 416
>gb|AY062628.1| Arabidopsis thaliana calreticulin (Crt1) (At1g56340; F13N6.20) mRNA, complete cds Length = 1440 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 406 ggagacactccttacagcattatgtttgggccagatat 443
>gb|U66343.1|ATU66343 Arabidopsis thaliana calreticulin (Crt1) mRNA, complete cds Length = 1463 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 ||||||||||| |||||| | ||||||||||||||||| Sbjct: 382 ggagacactccttacagcattatgtttgggccagatat 419
>dbj|AB026251.1| Lithospermum erythrorhizon mRNA for calreticulin, partial cds Length = 222 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 417 atcagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcg 476 |||||||||||| | |||| || ||||||||||| | |||||||| |||||||| |||| Sbjct: 107 atcagaagaaatttggtggtgatactccatacagtattatgtttggaccagatatttgcg 166 Query: 477 gg 478 || Sbjct: 167 gg 168
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 57 accgccagctccagctcctgcacc 80 |||||||||||||||||||||||| Sbjct: 2127344 accgccagctccagctcctgcacc 2127367
>gb|U74630.1|RCU74630 Ricinus communis calreticulin mRNA, complete cds Length = 1514 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Plus Query: 419 cagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatg 474 |||||||||| | |||| |||||||||||||| | |||||||| || |||||||| Sbjct: 364 cagaagaaatttggtggtgacactccatacagtatcatgtttggacccgatatatg 419 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 tcttcgaggagcggttcgaagatggttggga 159 ||||||||||||| ||||||||||| ||||| Sbjct: 74 tcttcgaggagcgtttcgaagatggatggga 104
>gb|M20565.1|ONGRAL1A Onchocerca volvulus calreticulin (RAL-1) mRNA, complete cds Length = 1256 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 365 caggaaattgaatgtggcggcggctatattaagctaatg 403 ||||| ||||| |||||||| |||||| ||||||||||| Sbjct: 319 caggacattgattgtggcggtggctatgttaagctaatg 357
>gb|AY336743.1| Brassica rapa subsp. pekinensis calreticulin 3 mRNA, partial cds Length = 1142 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Plus Query: 455 atgtttgggccagatatatgcgggactcaaacaaagaagctgcatcttatactctcttac 514 |||||||| ||||| ||||| || || || || |||||||| ||| | || || || ||| Sbjct: 415 atgtttggaccagacatatgtggaacgcagacgaagaagcttcatgtgattctttcatac 474 Query: 515 caggggcagaactatcctatcaaaaa 540 ||||| ||||||||||| || ||||| Sbjct: 475 cagggacagaactatccgattaaaaa 500
>gb|AF083699.1| Arabidopsis thaliana clone sps206 unknown mRNA Length = 438 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 434 ggagacactccatacagcttgatgtttgggccagatat 471 |||||| |||| |||||| | ||||||||||||||||| Sbjct: 396 ggagaccctccttacagcattatgtttgggccagatat 433
>gb|AF283816.1|AF283816 Pinus taeda calreticulin mRNA, complete cds Length = 1593 Score = 44.1 bits (22), Expect = 0.54 Identities = 49/58 (84%) Strand = Plus / Plus Query: 131 ttcgaggagcggttcgaagatggttgggagacacgttgggtgaaatccgattggaaaa 188 ||||||||||| ||||| ||| | ||||| | ||||||||| |||| |||||||||| Sbjct: 99 ttcgaggagcgtttcgatgatagctgggaaagtcgttgggtgcaatctgattggaaaa 156
>emb|AL645625.15| Mouse DNA sequence from clone RP23-183L1 on chromosome 4, complete sequence Length = 226754 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 430 tagtggagacactccatacagcttga 455 |||||||||||||||||| ||||||| Sbjct: 116168 tagtggagacactccataaagcttga 116143
>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence Length = 182677 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 gctccagctcctgcaccgcct 84 ||||||||||||||||||||| Sbjct: 61462 gctccagctcctgcaccgcct 61482
>ref|XM_539204.2| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 1 (LOC482083), mRNA Length = 15160 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 5314 gctccagctcctgctccgcctcctc 5290
>ref|XM_852242.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 8 (LOC482083), mRNA Length = 14734 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 4888 gctccagctcctgctccgcctcctc 4864
>ref|XM_852201.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 7 (LOC482083), mRNA Length = 14734 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 4888 gctccagctcctgctccgcctcctc 4864
>ref|XM_852160.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 6 (LOC482083), mRNA Length = 15175 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 5329 gctccagctcctgctccgcctcctc 5305
>ref|XM_852120.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 5 (LOC482083), mRNA Length = 14749 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 4903 gctccagctcctgctccgcctcctc 4879
>ref|XM_852074.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 4 (LOC482083), mRNA Length = 14863 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 5017 gctccagctcctgctccgcctcctc 4993
>ref|XM_843706.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1, transcript variant 2 (LOC482083), mRNA Length = 14812 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcctcctc 88 |||||||||||||| |||||||||| Sbjct: 4966 gctccagctcctgctccgcctcctc 4942
>emb|AL161450.14| Human DNA sequence from clone RP11-39K24 on chromosome 9 Contains the 3' end of the JAK2 gene for Janus kinase 2 (a protein tyrosine kinase), a casein kinase pseudogene, a trans-prenyltransferase (TPT) pseudogene, a NADH dehydrogenase 6 (MTND6) pseuodgene, a NADH dehydrogenase 1 (MTND1) pseudogene, a cytochrome c oxidase I (MTCO1) pseudogene, a cytochrome c oxidase II (MTCO2) pseudogene, an ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, a NADH dehydrogenase 4 (MTND4)pseudogene, a pseudogene similar to part of NADH dehydrogenase 5 (MTND5), a transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3) pseudogene, an immunoglobulin heavy constant epsilon pseudogene 2 (IGHEP2), a novel gene, the INSL6 gene for insulin-like 6 (RIF1) and 4 CpG islands, complete sequence Length = 171146 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 gctccagctcctgcaccgcct 84 ||||||||||||||||||||| Sbjct: 22107 gctccagctcctgcaccgcct 22087
>emb|AL138962.16| Human DNA sequence from clone RP11-279N8 on chromosome 13 Contains two novel genes, complete sequence Length = 124518 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 tttgagcaggaaattgaatgt 379 ||||||||||||||||||||| Sbjct: 13918 tttgagcaggaaattgaatgt 13938
>emb|AL138727.10| Human DNA sequence from clone RP1-144O21 on chromosome 6 Contains the 5' end of the MAP3K7IP2 gene for mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (TAK1-binding protein 2)(TAB2, FLJ21885, KIAA0733) and a CpG island, complete sequence Length = 64096 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 gcagccgccggcggggcgacc 59 ||||||||||||||||||||| Sbjct: 57348 gcagccgccggcggggcgacc 57328
>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor Length = 1614 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 ggggaggtcatcttcgaggagcggttcgaagatggttggga 159 ||||||||| ||||| ||||| |||||||||||| ||||| Sbjct: 148 ggggaggtcttcttccaggagaagttcgaagatggctggga 188
>emb|X81697.1|ATCYTACS1 A.thaliana cytACS1 mRNA for cysteine synthase Length = 1278 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 439 cactccatacagcttgatgtttggg 463 ||||||||||||||||| ||||||| Sbjct: 713 cactccatacagcttgaagtttggg 689
>gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, complete sequence Length = 135689 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttatactctcttaccagggg 520 ||||||||||||||||||||| Sbjct: 49899 cttatactctcttaccagggg 49879
>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence Length = 184194 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 cttatactctcttaccagggg 520 ||||||||||||||||||||| Sbjct: 104327 cttatactctcttaccagggg 104307
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 gctcctgctcgcctccgggga 123 ||||||||||||||||||||| Sbjct: 5967594 gctcctgctcgcctccgggga 5967614
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 42.1 bits (21), Expect = 2.1 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 233 tattctggggatcctgatgacaaaggcat 261 ||||||||||||||| ||||||||||||| Sbjct: 2172128 tattctggggatcct-atgacaaaggcat 2172101
>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds Length = 1545 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 ggggaggtcatcttcgaggagcggttcgaagatggttggga 159 ||||||||| ||||| ||||| |||||||||||| ||||| Sbjct: 150 ggggaggtcttcttccaggagaagttcgaagatggctggga 190
>gb|AY103855.1| Zea mays PCO074428 mRNA sequence Length = 1787 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 119 ggggaggtcatcttcgaggagcggttcgaagatggttggga 159 ||||||||| ||||| ||||| |||||||||||| ||||| Sbjct: 205 ggggaggtcttcttccaggagaagttcgaagatggctggga 245
>gb|AF134733.1|AF134733 Prunus armeniaca calcium-binding protein calreticulin mRNA, complete cds Length = 1524 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 417 atcagaagaaatatagtggagacactccatacagcttgatgtttgggccagatatatgcg 476 |||||||||||| | | || || || |||||||| | ||||||||||||||||| |||| Sbjct: 390 atcagaagaaatttggcggtgataccccatacagtatcatgtttgggccagatatctgcg 449 Query: 477 g 477 | Sbjct: 450 g 450
>gb|AF052978.1|AF052978 Dirofilaria immitis calreticulin precursor, mRNA, complete cds Length = 1538 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 377 tgtggcggcggctatattaagctaatgtc 405 |||||||| |||||| ||||||||||||| Sbjct: 331 tgtggcggtggctatgttaagctaatgtc 359
>gb|DQ314877.1| Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (MAP3K7IP2) gene, complete cds Length = 97056 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 gcagccgccggcggggcgacc 59 ||||||||||||||||||||| Sbjct: 1750 gcagccgccggcggggcgacc 1770
>gb|AE017044.1| Yersinia pestis biovar Mediaevails str. 91001 plasmid pCRY, complete sequence Length = 21742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcgaagggaaagccggta 209 |||||||||||||||||||| Sbjct: 4824 gagcgaagggaaagccggta 4843
>gb|AC132863.8| Mus musculus chromosome 15, clone RP24-388K7, complete sequence Length = 210979 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gccagctccagctcctgcac 79 |||||||||||||||||||| Sbjct: 119443 gccagctccagctcctgcac 119424
>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence Length = 253738 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gatagatgctaggcattttg 290 |||||||||||||||||||| Sbjct: 187289 gatagatgctaggcattttg 187308
>ref|NM_020893.1| Homo sapiens KIAA1529 (KIAA1529), mRNA Length = 6269 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 2982 ccagctccagctcctgcacc 2963
>gb|BC047097.1| Homo sapiens KIAA1529, mRNA (cDNA clone IMAGE:5268490), partial cds Length = 2796 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1701 ccagctccagctcctgcacc 1682
>gb|AY233333.1| Escherichia coli strain ECOR31 high pathogenicity island, complete sequence Length = 40365 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gagcgaagggaaagccggta 209 |||||||||||||||||||| Sbjct: 7586 gagcgaagggaaagccggta 7605
>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence Length = 181676 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcaccgcctcctc 88 ||||||||||||||||| || ||||||| Sbjct: 44824 ccagctccagctcctgctcctcctcctc 44851
>gb|AC005589.1| Homo sapiens BAC clone RP11-161H12 from 7, complete sequence Length = 132077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 accgccagctccagctcctg 76 |||||||||||||||||||| Sbjct: 114624 accgccagctccagctcctg 114605
>gb|AC145773.1| Pan troglodytes BAC clone RP43-32M11 from 7, complete sequence Length = 190630 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 accgccagctccagctcctg 76 |||||||||||||||||||| Sbjct: 173111 accgccagctccagctcctg 173092
>gb|BC112930.1| Homo sapiens KIAA1529, mRNA (cDNA clone IMAGE:6473441), complete cds Length = 5610 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 2116 ccagctccagctcctgcacc 2097
>emb|AL512590.2| Human DNA sequence from clone RP11-23J9 on chromosome 9 Contains the 3' end of the gene for KIAA1529 protein, the 5' end of a gene for tudor repeat associator with PCTAIRE 2 (PCTAIRE2BP), a pseudogene similar to part of ral guanine nucleotide dissociation stimulator (RALGDS) and two CpG islands, complete sequence Length = 165432 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 46404 ccagctccagctcctgcacc 46385
>gb|AF490265.1| Streptococcus pneumoniae strain SP95 PspA (pspA) gene, partial cds Length = 634 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 557 ccagctccagctcctgcacc 576
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gccgccggcggggcgaccgc 61 |||||||||||||||||||| Sbjct: 283885 gccgccggcggggcgaccgc 283866
>emb|AJ459419.1|TRU459419 Takifugu rubripes cacng5 gene, prkca gene and putative LINE-like retrotransposon, cosmids C012B17 and C123B01 Length = 64219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cgctctcctcgctgctcctg 109 |||||||||||||||||||| Sbjct: 10280 cgctctcctcgctgctcctg 10261
>emb|CR749320.1| Homo sapiens mRNA; cDNA DKFZp686B2031 (from clone DKFZp686B2031) Length = 5232 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1700 ccagctccagctcctgcacc 1681
>gb|AC027674.10| Homo sapiens chromosome 10 clone RP11-255M1, complete sequence Length = 153151 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gacaaaggcattcaaacaac 270 |||||||||||||||||||| Sbjct: 73899 gacaaaggcattcaaacaac 73918
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 cctcgctgctcctgctcgcc 115 |||||||||||||||||||| Sbjct: 2354066 cctcgctgctcctgctcgcc 2354047
>emb|BX511080.4| Zebrafish DNA sequence from clone DKEY-237N7 in linkage group 3, complete sequence Length = 115272 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 actcaaacaaagaagctgca 498 |||||||||||||||||||| Sbjct: 94477 actcaaacaaagaagctgca 94496
>emb|CR522944.1| Gallus gallus finished cDNA, clone ChEST740g16 Length = 1020 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gctctcctcgctgctcctgc 110 |||||||||||||||||||| Sbjct: 59 gctctcctcgctgctcctgc 40
>emb|BX950827.2| Gallus gallus finished cDNA, clone ChEST53m10 Length = 1865 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ctccagctcctgcaccgcctcctc 88 |||||||||||||||| ||||||| Sbjct: 1072 ctccagctcctgcaccccctcctc 1095
>emb|CR353428.1| Gallus gallus finished cDNA, clone ChEST145i17 Length = 1318 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcaccgcctcctc 88 ||||||||||||||||| || ||||||| Sbjct: 1110 ccagctccagctcctgctcctcctcctc 1083
>ref|XM_624880.1| PREDICTED: Apis mellifera similar to ENSANGP00000018326 (LOC552505), mRNA Length = 2796 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 96 cctcgctgctcctgctcgcctccg 119 ||||||||||||| |||||||||| Sbjct: 100 cctcgctgctcctcctcgcctccg 77
>gb|AF255908.1|AF255908 Streptococcus pneumoniae strain 69 PspA (pspA) gene, partial cds Length = 728 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 650 ccagctccagctcctgcacc 669 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 617 ccagctccagctcctgcacc 636 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 584 ccagctccagctcctgcacc 603 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 551 ccagctccagctcctgcacc 570
>gb|AF255549.1|AF255549 Streptococcus pneumoniae PspA (pspA) gene, partial cds Length = 740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 661 ccagctccagctcctgcacc 680
>gb|AF255546.1|AF255546 Streptococcus pneumoniae PspA (pspA) gene, partial cds Length = 768 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 564 ccagctccagctcctgcacc 583
>gb|AF255543.1|AF255543 Streptococcus pneumoniae PspA (pspA) gene, partial cds Length = 669 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 591 ccagctccagctcctgcacc 610 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 438 ccagctccagctcctgcacc 457
>gb|AF255542.1|AF255542 Streptococcus pneumoniae PspA (pspA) gene, partial cds Length = 748 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 670 ccagctccagctcctgcacc 689 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 544 ccagctccagctcctgcacc 563
>gb|AF253408.1|AF253408 Streptococcus pneumoniae strain SP198 PspA (pspA) gene, partial cds Length = 739 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 661 ccagctccagctcctgcacc 680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 508 ccagctccagctcctgcacc 527
>gb|AF253406.1|AF253406 Streptococcus pneumoniae strain SP200 PspA (pspA) gene, partial cds Length = 768 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 564 ccagctccagctcctgcacc 583
>gb|AF254259.1|AF254259 Streptococcus pneumoniae strain SP193 PspA (pspA) gene, partial cds Length = 771 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 693 ccagctccagctcctgcacc 712 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 540 ccagctccagctcctgcacc 559
>gb|AF254256.1|AF254256 Streptococcus pneumoniae strain 115 PspA (pspA) gene, partial cds Length = 628 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 550 ccagctccagctcctgcacc 569 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 397 ccagctccagctcctgcacc 416
>gb|AF254255.1|AF254255 Streptococcus pneumoniae strain SP222 PspA (pspA) gene, partial cds Length = 773 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 695 ccagctccagctcctgcacc 714
>gb|AF071826.1|AF071826 Streptococcus pneumoniae strain BG7817 PspA (pspA) gene, partial cds Length = 1511 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1459 ccagctccagctcctgcacc 1478
>gb|AF071824.1|AF071824 Streptococcus pneumoniae strain BG7561 PspA (pspA) gene, partial cds Length = 1512 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1462 ccagctccagctcctgcacc 1481 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1309 ccagctccagctcctgcacc 1328
>gb|AF071821.1|AF071821 Streptococcus pneumoniae strain BG11703 PspA (pspA) gene, partial cds Length = 1515 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1459 ccagctccagctcctgcacc 1478
>gb|AF071817.1|AF071817 Streptococcus pneumoniae strain BG8090 PspA (pspA) gene, partial cds Length = 1578 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1525 ccagctccagctcctgcacc 1544 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1492 ccagctccagctcctgcacc 1511 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1459 ccagctccagctcctgcacc 1478
>gb|AF071802.1|AF071802 Streptococcus pneumoniae strain AC94 PspA (pspA) gene, partial cds Length = 1252 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 1069 ccagctccagctcctgcacc 1088
>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete sequence Length = 116887 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcaccgcctcctc 88 ||||||||||||||||| || ||||||| Sbjct: 19029 ccagctccagctcctgctcctcctcctc 19002
>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence Length = 198851 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aaaaggagcgaagggaaagc 204 |||||||||||||||||||| Sbjct: 90205 aaaaggagcgaagggaaagc 90186
>gb|AC115692.6| Mus musculus chromosome 18, clone RP23-463G11, complete sequence Length = 227631 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aaaaggagcgaagggaaagc 204 |||||||||||||||||||| Sbjct: 206964 aaaaggagcgaagggaaagc 206983
>gb|U74631.1|RCU74631 Ricinus communis calreticulin gene, complete cds Length = 4975 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 419 cagaagaaatatagtggagacactccatacag 450 |||||||||| | |||| |||||||||||||| Sbjct: 2926 cagaagaaatttggtggtgacactccatacag 2957
>dbj|AB040962.1| Homo sapiens mRNA for KIAA1529 protein, partial cds Length = 6269 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccagctccagctcctgcacc 80 |||||||||||||||||||| Sbjct: 2982 ccagctccagctcctgcacc 2963 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,790,825 Number of Sequences: 3902068 Number of extensions: 4790825 Number of successful extensions: 96585 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 95889 Number of HSP's gapped (non-prelim): 698 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
