| Clone Name | basd17e19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 119267 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 119210 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119150 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119090 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 119030 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118970 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118910 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 118850 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118849 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 118790 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118789 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 118730 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 118729 aaatgcatcggtaggggagcgttccg 118704 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 95889 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 95946 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95947 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 96006 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96007 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96066 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96067 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96126 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96127 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96186 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96246 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96247 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 96306 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96307 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 96366 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96367 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 96426 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 96427 aaatgcatcggtaggggagcgttccg 96452
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 119267 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 119210 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119150 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119090 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 119030 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118970 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118910 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 118850 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118849 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 118790 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118789 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 118730 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 118729 aaatgcatcggtaggggagcgttccg 118704 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 95889 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 95946 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95947 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 96006 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96007 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96066 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96067 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96126 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96127 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96186 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96246 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96247 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 96306 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96307 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 96366 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96367 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 96426 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 96427 aaatgcatcggtaggggagcgttccg 96452
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 119216 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 119159 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119158 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119099 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119098 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119039 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119038 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 118979 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118978 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118919 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118918 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118859 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118858 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 118799 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118798 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 118739 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118738 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 118679 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 118678 aaatgcatcggtaggggagcgttccg 118653 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 95834 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 95891 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95892 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95951 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95952 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96011 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96012 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96071 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96072 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96131 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96132 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96191 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96192 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 96251 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96252 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 96311 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96312 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 96371 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 96372 aaatgcatcggtaggggagcgttccg 96397
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 31508467 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 31508524 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508525 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 31508584 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508585 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 31508644 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508645 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 31508704 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508705 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 31508764 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508765 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 31508824 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508825 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 31508884 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508885 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 31508944 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508945 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 31509004 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 31509005 aaatgcatcggtaggggagcgttccg 31509030 Score = 488 bits (246), Expect = e-134 Identities = 246/246 (100%) Strand = Plus / Minus Query: 321 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 381 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 441 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 501 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 561 gttccg 566 |||||| Sbjct: 11513077 gttccg 11513072 Score = 285 bits (144), Expect = 8e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 543 atgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccg 27320520 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 337 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 396 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 397 taaaggaggtggggg 411 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatcaccagctaaggccc 377 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 239 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 293 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 84129 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 84072 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84071 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 84012 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84011 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 83952 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83951 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 83892 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83891 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 83832 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83831 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 83772 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83771 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 83712 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83711 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 83652 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83651 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 83592 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 83591 aaatgcatcggtaggggagcgttccg 83566
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 119236 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 119179 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119178 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119119 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119118 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119059 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119058 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 118999 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118998 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118939 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118938 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118879 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118878 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 118819 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118818 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 118759 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118758 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 118699 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 118698 aaatgcatcggtaggggagcgttccg 118673 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 95882 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 95939 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95940 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95999 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96000 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96059 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96060 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96119 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96120 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96179 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96180 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96239 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96240 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 96299 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96300 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 96359 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96360 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 96419 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 96420 aaatgcatcggtaggggagcgttccg 96445
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 14656 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 14713 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14714 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 14773 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14774 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 14833 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14834 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 14893 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14894 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 14953 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14954 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 15013 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15014 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 15073 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15074 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 15133 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15134 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 15193 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 15194 aaatgcatcggtaggggagcgttccg 15219 Score = 1049 bits (529), Expect = 0.0 Identities = 559/566 (98%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||| | ||||||||||||||| |||||| |||| Sbjct: 122931 ggcgattgtcactgcttatgg-acccgaac-taggtgatctatccatg-accaggatgaa 122987 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122988 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 123047 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123048 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 123107 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123108 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 123167 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123168 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 123227 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123228 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 123287 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123288 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 123347 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123348 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 123407 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123408 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 123467 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 123468 aaatgcatcggtaggggagcgttccg 123493
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 141464 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 141521 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141522 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 141581 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141582 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 141641 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141642 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 141701 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141702 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 141761 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141762 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 141821 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141822 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 141881 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141882 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 141941 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141942 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 142001 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 142002 aaatgcatcggtaggggagcgttccg 142027
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 20891 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 20948 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20949 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 21008 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21009 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 21068 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21069 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 21128 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21129 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 21188 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21189 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 21248 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21249 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 21308 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21309 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 21368 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21369 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 21428 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 21429 aaatgcatcggtaggggagcgttccg 21454 Score = 1051 bits (530), Expect = 0.0 Identities = 560/567 (98%), Gaps = 3/567 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 44227 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 44170 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44169 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 44110 Query: 121 tgtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcg 179 |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 44109 tgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcg 44050 Query: 180 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44049 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 43990 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43989 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 43930 Query: 300 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43929 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 43870 Query: 360 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43869 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 43810 Query: 420 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43809 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 43750 Query: 480 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43749 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 43690 Query: 540 aaaatgcatcggtaggggagcgttccg 566 ||||||||||||||||||||||||||| Sbjct: 43689 aaaatgcatcggtaggggagcgttccg 43663
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 856 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 799 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 739 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 679 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 619 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 559 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 499 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 439 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 379 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 319 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 318 aaatgcatcggtaggggagcgttccg 293
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 9268816 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 9268873 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268874 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9268933 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268934 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9268993 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268994 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9269053 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269054 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9269113 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269114 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9269173 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269174 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 9269233 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269234 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 9269293 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269294 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 9269353 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 9269354 aaatgcatcggtaggggagcgttccg 9269379 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 9056730 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 9056787 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056788 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9056847 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056848 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9056907 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056908 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9056967 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056968 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9057027 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057028 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9057087 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057088 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 9057147 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057148 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 9057207 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057208 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 9057267 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 9057268 aaatgcatcggtaggggagcgttccg 9057293 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||| ||||||||||||||| |||||| |||| Sbjct: 9228316 ggcgattgtcactgcttatgg-acccgaacctaggtgatctatccatg-accaggatgaa 9228373 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228374 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9228433 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228434 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9228493 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228494 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9228553 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228554 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9228613 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228614 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9228673 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228674 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 9228733 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228734 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 9228793 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228794 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 9228853 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 9228854 aaatgcatcggtaggggagcgttccg 9228879 Score = 1049 bits (529), Expect = 0.0 Identities = 559/566 (98%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||| | ||||||||||||||| |||||| |||| Sbjct: 9164905 ggcgattgtcactgcttatgg-acccgaac-taggtgatctatccatg-accaggatgaa 9164961 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164962 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 9165021 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165022 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9165081 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165082 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9165141 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165142 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9165201 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165202 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9165261 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165262 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 9165321 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165322 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 9165381 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165382 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 9165441 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 9165442 aaatgcatcggtaggggagcgttccg 9165467
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 19938801 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 19938858 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938859 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 19938918 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938919 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 19938978 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938979 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 19939038 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939039 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 19939098 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939099 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 19939158 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939159 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 19939218 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939219 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 19939278 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939279 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 19939338 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 19939339 aaatgcatcggtaggggagcgttccg 19939364 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 10387668 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 10387725 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387726 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10387785 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387786 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10387845 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387846 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10387905 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387906 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10387965 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387966 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10388025 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388026 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 10388085 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388086 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 10388145 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388146 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 10388205 Query: 541 aaatgcatcggtaggggagcgttccg 566 ||||||||||||||| |||||||||| Sbjct: 10388206 aaatgcatcggtaggagagcgttccg 10388231 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 10276630 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 10276573 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276572 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10276513 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276512 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10276453 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276452 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10276393 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276392 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10276333 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276332 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10276273 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276272 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 10276213 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276212 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 10276153 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10276152 gagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtca 10276093 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 10276092 aaatgcatcggtaggggagcgttccg 10276067 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 477 gatcgagcgcccttgcgctgaagatgaacggggctaagc 515 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 246 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 305 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagag 347 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 31598983 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 31599040 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599041 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 31599100 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599101 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 31599160 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599161 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 31599220 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599221 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 31599280 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599281 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 31599340 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599341 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 31599400 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599401 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 31599460 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599461 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 31599520 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 31599521 aaatgcatcggtaggggagcgttccg 31599546 Score = 488 bits (246), Expect = e-134 Identities = 246/246 (100%) Strand = Plus / Minus Query: 321 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 381 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 441 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 501 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 561 gttccg 566 |||||| Sbjct: 11509840 gttccg 11509835 Score = 285 bits (144), Expect = 8e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 543 atgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccg 27411843 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 337 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 396 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 397 taaaggaggtggggg 411 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatcaccagctaaggccc 377 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 239 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 293 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 33526299 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 33526356 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526357 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 33526416 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526417 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 33526476 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526477 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 33526536 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526537 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 33526596 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526597 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 33526656 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526657 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 33526716 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526717 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 33526776 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526777 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 33526836 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 33526837 aaatgcatcggtaggggagcgttccg 33526862 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 330 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 389 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 390 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 449 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 450 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 510 ctaagcgatctgccgaagctgtgggatgtcaaaat 544 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 477 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 518 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 47242 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 47185 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47184 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 47125 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47124 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 47065 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47064 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 47005 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47004 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 46945 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46944 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 46885 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46884 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 46825 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46824 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 46765 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46764 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 46705 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 46704 aaatgcatcggtaggggagcgttccg 46679
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 71496 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 71553 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71554 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 71613 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71614 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 71673 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71674 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 71733 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71734 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 71793 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71794 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 71853 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71854 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 71913 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71914 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 71973 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71974 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 72033 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 72034 aaatgcatcggtaggggagcgttccg 72059
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 123066 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 123009 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123008 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 122949 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122948 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 122889 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122888 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 122829 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122828 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 122769 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122768 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 122709 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122708 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 122649 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122648 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 122589 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122588 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 122529 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 122528 aaatgcatcggtaggggagcgttccg 122503 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 99771 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 99828 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99829 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 99888 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99889 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 99948 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99949 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 100008 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100009 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 100068 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100069 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 100128 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100129 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 100188 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100189 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 100248 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100249 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 100308 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 100309 aaatgcatcggtaggggagcgttccg 100334
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 268 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 325 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 385 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 445 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 505 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 565 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 625 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 685 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 745 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 805 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 806 aaatgcatcggtaggggagcgttccg 831
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 463 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 520 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 580 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 640 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 700 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 760 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 820 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 880 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 940 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 1000 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 1001 aaatgcatcggtaggggagcgttccg 1026
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 334 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 391 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 451 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 511 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 571 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 631 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 691 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 751 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 811 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 871 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 872 aaatgcatcggtaggggagcgttccg 897
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 465 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 522 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 582 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 642 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 702 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 762 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 822 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 882 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 942 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 1002 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 1003 aaatgcatcggtaggggagcgttccg 1028
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 84 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 141 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 201 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 261 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 321 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 381 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 441 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 501 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 561 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 621 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 622 aaatgcatcggtaggggagcgttccg 647
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 284 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 341 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 401 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 461 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 521 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 581 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 641 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 701 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 761 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 821 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 822 aaatgcatcggtaggggagcgttccg 847
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 463 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 520 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 580 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 640 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 700 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 760 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 820 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 880 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 940 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 1000 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 1001 aaatgcatcggtaggggagcgttccg 1026
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 86 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 143 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 203 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 263 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 323 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 383 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 443 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 503 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 563 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 623 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 624 aaatgcatcggtaggggagcgttccg 649
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 19950077 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 19950134 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950135 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 19950194 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950195 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 19950254 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950255 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 19950314 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950315 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 19950374 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950375 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 19950434 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950435 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 19950494 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950495 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 19950554 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950555 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 19950614 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 19950615 aaatgcatcggtaggggagcgttccg 19950640 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 10393707 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 10393764 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393765 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10393824 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393825 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10393884 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393885 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10393944 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393945 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10394004 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394005 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10394064 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394065 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 10394124 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394125 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 10394184 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394185 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 10394244 Query: 541 aaatgcatcggtaggggagcgttccg 566 ||||||||||||||| |||||||||| Sbjct: 10394245 aaatgcatcggtaggagagcgttccg 10394270 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 10282669 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 10282612 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282611 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 10282552 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282551 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 10282492 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282491 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 10282432 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282431 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 10282372 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282371 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 10282312 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282311 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 10282252 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282251 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 10282192 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 10282191 gagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtca 10282132 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 10282131 aaatgcatcggtaggggagcgttccg 10282106 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 477 gatcgagcgcccttgcgctgaagatgaacggggctaagc 515 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 246 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 305 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagag 347 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 123783 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 123726 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123725 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 123666 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123665 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 123606 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123605 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 123546 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123545 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 123486 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123485 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 123426 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123425 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 123366 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123365 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 123306 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123305 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 123246 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 123245 aaatgcatcggtaggggagcgttccg 123220 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 100448 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 100505 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100506 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 100565 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100566 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 100625 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100626 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 100685 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100686 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 100745 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100746 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 100805 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100806 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 100865 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100866 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 100925 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100926 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 100985 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 100986 aaatgcatcggtaggggagcgttccg 101011
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 119210 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 119153 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119152 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119093 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119033 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 118973 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 118913 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 118853 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118852 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 118793 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118792 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 118733 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118732 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 118673 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 118672 aaatgcatcggtaggggagcgttccg 118647 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 95829 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 95886 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95887 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95946 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95947 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 96006 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96007 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 96066 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96067 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 96126 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96127 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 96186 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 96246 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96247 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 96306 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96307 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 96366 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 96367 aaatgcatcggtaggggagcgttccg 96392
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 119402 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 119345 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119344 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 119285 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119284 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 119225 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119224 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 119165 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119164 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 119105 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119104 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 119045 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119044 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 118985 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118984 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 118925 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118924 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 118865 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 118864 aaatgcatcggtaggggagcgttccg 118839 Score = 1072 bits (541), Expect = 0.0 Identities = 561/566 (99%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 95492 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 95549 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95550 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 95609 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95610 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 95669 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95670 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 95729 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95730 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 95789 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95790 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 95849 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95850 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 95909 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95910 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 95969 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95970 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 96029 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 96030 aaatgcatcggtaggggagcgttccg 96055
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 118183 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 118126 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118125 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 118066 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118065 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 118006 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118005 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 117946 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117945 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 117886 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117885 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 117826 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117825 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 117766 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117765 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 117706 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117705 gagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtca 117646 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 117645 aaatgcatcggtaggggagcgttccg 117620
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 94060 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 94117 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94118 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 94177 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94178 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 94237 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94238 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 94297 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94298 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 94357 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94358 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 94417 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94418 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 94477 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94478 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 94537 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94538 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 94597 Query: 541 aaatgcatcggtaggggagcgttccg 566 ||||||||||||||| |||||||||| Sbjct: 94598 aaatgcatcggtaggagagcgttccg 94623
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 57955 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 57898 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57897 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 57838 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57837 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 57778 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57777 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 57718 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57717 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 57658 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57657 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 57598 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57597 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 57538 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57537 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 57478 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 57477 gagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtca 57418 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 57417 aaatgcatcggtaggggagcgttccg 57392
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 28124 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 28181 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28182 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 28241 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28242 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 28301 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28302 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 28361 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28362 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 28421 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28422 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 28481 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28482 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 28541 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28542 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 28601 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28602 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 28661 Query: 541 aaatgcatcggtaggggagcgttccg 566 ||||||||||||||| |||||||||| Sbjct: 28662 aaatgcatcggtaggagagcgttccg 28687
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 9241465 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 9241408 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241407 gcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagt 9241348 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241347 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 9241288 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241287 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 9241228 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241227 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 9241168 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241167 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 9241108 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241107 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 9241048 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241047 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 9240988 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240987 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 9240928 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 9240927 aaatgcatcggtaggggagcgttccg 9240902 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 211 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 270 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 271 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 330 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 331 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 376 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 418 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 419 acagccaggaggtttgcctagaagcagccaccctttaaagag 460 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 526 agctgtgggatgtcaaaatgcatcggtaggggagcgttccg 566 |||| |||||| ||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccg 3580245 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagct 529 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 364 accagctaaggcccctaaatgaccgctcagtgataaagga 403 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1065 bits (537), Expect = 0.0 Identities = 560/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 52678 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 52621 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 52620 gcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagt 52561 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52560 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 52501 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52500 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 52441 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52440 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 52381 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52380 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 52321 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52320 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 52261 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52260 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 52201 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52200 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 52141 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 52140 aaatgcatcggtaggggagcgttccg 52115
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1057 bits (533), Expect = 0.0 Identities = 559/566 (98%), Gaps = 2/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 462 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 519 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 579 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 639 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 699 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 759 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 819 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 820 atcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagac 879 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 939 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 999 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 1000 aaatgcatcggtaggggagcgttccg 1025
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1009 bits (509), Expect = 0.0 Identities = 555/566 (98%), Gaps = 4/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 123006 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 122949 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122948 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 122889 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122888 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 122829 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122828 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgc 122770 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122769 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 122710 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122709 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 122650 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122649 atcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagac 122590 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122589 agccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-c 122531 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122530 tggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 122471 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 122470 aaatgcatcggtaggggagcgttccg 122445 Score = 1009 bits (509), Expect = 0.0 Identities = 555/566 (98%), Gaps = 4/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 99731 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 99788 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99789 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 99848 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99849 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 99908 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 99909 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgc 99967 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99968 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 100027 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100028 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 100087 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 100088 atcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagac 100147 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 100148 agccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-c 100206 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100207 tggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 100266 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 100267 aaatgcatcggtaggggagcgttccg 100292
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1009 bits (509), Expect = 0.0 Identities = 555/566 (98%), Gaps = 4/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 6084 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 6141 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6142 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 6201 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6202 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 6261 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 6262 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgc 6320 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6321 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 6380 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6381 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 6440 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6441 atcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagac 6500 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6501 agccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-c 6559 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6560 tggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 6619 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 6620 aaatgcatcggtaggggagcgttccg 6645
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1009 bits (509), Expect = 0.0 Identities = 555/566 (98%), Gaps = 4/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 672 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 729 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 789 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 849 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 850 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgc 908 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 968 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 1028 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 atcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagac 1088 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1089 agccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-c 1147 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1148 tggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 1207 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 1208 aaatgcatcggtaggggagcgttccg 1233
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 969 bits (489), Expect = 0.0 Identities = 545/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 141443 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 141386 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141385 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 141326 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141325 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 141266 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 141265 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 141206 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 141205 ggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaag 141146 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141145 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 141086 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 141085 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 141026 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141025 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 140966 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 140965 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 140906 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 140905 gcatcggtaggggagcgttccg 140884 Score = 969 bits (489), Expect = 0.0 Identities = 545/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 112214 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 112271 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112272 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 112331 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112332 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 112391 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 112392 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 112451 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 112452 ggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaag 112511 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112512 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 112571 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 112572 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 112631 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112632 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 112691 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 112692 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 112751 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 112752 gcatcggtaggggagcgttccg 112773
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 138840 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 138783 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138782 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 138723 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138722 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 138663 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138662 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 138603 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 138602 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgag 138543 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138542 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 138483 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 138482 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 138423 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138422 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 138363 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 138303 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 138302 gcatcggtaggggagcgttccg 138281 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 110257 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 110314 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110315 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 110374 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110375 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 110434 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 110435 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 110494 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 110495 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcgag 110554 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110555 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 110614 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 110615 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 110674 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110675 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 110734 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110735 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 110794 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 110795 gcatcggtaggggagcgttccg 110816
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 131003 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 130946 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130945 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 130886 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130885 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 130826 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 130825 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 130766 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 130765 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 130706 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130705 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 130646 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 130645 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 130586 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130585 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 130526 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 130525 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 130466 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 130465 acatcggtaggggagcgttccg 130444 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 103632 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 103689 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103690 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 103749 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103750 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 103809 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 103810 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 103869 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 103870 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 103929 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103930 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 103989 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 103990 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 104049 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104050 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 104109 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104110 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 104169 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 104170 acatcggtaggggagcgttccg 104191
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135237 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 135180 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135179 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 135120 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135119 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 135060 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 135059 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 135000 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 134999 ggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaag 134940 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134939 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 134880 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134879 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 134820 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134819 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134760 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 134759 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 134700 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 134699 gcatcggtaggggagcgttccg 134678 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106669 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106726 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106727 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106786 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106787 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106846 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106847 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106906 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 106907 ggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaag 106966 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106967 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107026 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 107027 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 107086 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107087 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 107146 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107147 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107206 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 107207 gcatcggtaggggagcgttccg 107228
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 661 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 718 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 778 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 838 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 839 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 898 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 899 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaag 958 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 959 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 1018 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1019 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagcc 1078 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1079 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1138 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1139 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 1198 Query: 545 gcatcggtaggggagcgttccg 566 ||||| |||||||||||||||| Sbjct: 1199 gcatccgtaggggagcgttccg 1220
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 684 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 741 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 801 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 861 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 862 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 921 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 922 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaag 981 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 1041 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1042 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1101 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1102 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1161 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1162 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 1221 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 1222 gcatcggtaggggagcgttccg 1243
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135516 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 135459 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135458 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 135399 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135398 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 135339 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 135338 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 135279 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 135278 ggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaag 135219 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135218 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 135159 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135158 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 135099 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135098 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 135039 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135038 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 134979 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 134978 gcatcggtaggggagcgttccg 134957 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106891 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106948 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106949 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 107008 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107009 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 107068 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 107069 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 107128 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 107129 ggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataacaggggtcaag 107188 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107189 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107248 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 107249 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 107308 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107309 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 107368 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107369 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107428 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 107429 gcatcggtaggggagcgttccg 107450
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 961 bits (485), Expect = 0.0 Identities = 544/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 665 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 722 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 782 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 842 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 843 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 902 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 903 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 962 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 1022 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1023 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1082 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1083 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1142 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1143 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaag 1202 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 1203 gcatcggtaggggagcgttccg 1224
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 959 bits (484), Expect = 0.0 Identities = 547/566 (96%), Gaps = 6/566 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 127203 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 127146 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127145 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 127086 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127085 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 127026 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127025 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 126966 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 126965 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa----caggggt 126910 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126909 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 126850 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 126849 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagac 126790 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 126789 agccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatc 126730 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126729 gagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 126670 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 126669 aaatgcatcggtaggggagcgttccg 126644 Score = 959 bits (484), Expect = 0.0 Identities = 547/566 (96%), Gaps = 6/566 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 107719 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 107776 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107777 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 107836 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107837 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 107896 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107897 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcga 107956 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 107957 gagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa----caggggt 108012 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108013 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 108072 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 108073 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagac 108132 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 108133 agccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatc 108192 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108193 gagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 108252 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 108253 aaatgcatcggtaggggagcgttccg 108278
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 132111 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 132054 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132053 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 131994 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131993 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 131934 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 131933 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 131874 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131873 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 131814 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131813 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 131754 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 131753 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 131694 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131693 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 131634 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131633 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 131574 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 131573 acatcggtaggggagcgttccg 131552 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 104767 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 104824 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104825 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 104884 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104885 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 104944 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 104945 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 105004 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105005 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 105064 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105065 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 105124 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 105125 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 105184 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105185 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 105244 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105245 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 105304 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 105305 acatcggtaggggagcgttccg 105326
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 136274 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 136217 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136216 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 136157 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136156 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 136097 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 136096 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 136037 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 136036 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 135977 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135976 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 135917 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135916 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 135857 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135856 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 135797 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135796 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 135737 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 135736 acatcggtaggggagcgttccg 135715 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 107283 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 107340 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107341 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 107400 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107401 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 107460 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 107461 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 107520 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107521 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 107580 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107581 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107640 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 107641 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 107700 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107701 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 107760 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107761 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107820 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 107821 acatcggtaggggagcgttccg 107842
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135928 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 135871 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135870 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 135811 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135810 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 135751 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 135750 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 135691 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135690 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 135631 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135630 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 135571 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135570 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 135511 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135510 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 135451 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135450 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 135391 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 135390 acatcggtaggggagcgttccg 135369 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106497 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106554 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106555 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106614 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106615 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106674 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106675 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106734 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106735 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 106794 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106795 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106854 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106855 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106914 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106915 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106974 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106975 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107034 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 107035 acatcggtaggggagcgttccg 107056
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 954 bits (481), Expect = 0.0 Identities = 547/566 (96%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 133562 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 133505 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133504 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 133445 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133444 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 133385 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 133384 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 133325 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 133324 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcacaggg-t 133266 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133265 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 133206 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 133205 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagac 133146 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 133145 agccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatc 133086 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133085 gagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaa 133026 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 133025 aaatgcatcggtaggggagcgttccg 133000 Score = 954 bits (481), Expect = 0.0 Identities = 547/566 (96%), Gaps = 3/566 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 104409 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 104466 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104467 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagt 104526 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104527 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 104586 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 104587 tgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcga 104646 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 104647 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcacaggg-t 104705 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104706 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 104765 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 104766 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagac 104825 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 104826 agccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatc 104885 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104886 gagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaa 104945 Query: 541 aaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||| Sbjct: 104946 aaatgcatcggtaggggagcgttccg 104971
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 132104 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 132047 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132046 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 131987 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131986 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 131927 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 131926 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 131867 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131866 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 131807 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131806 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 131747 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 131746 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 131687 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131686 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 131627 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131626 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 131567 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 131566 acatcggtaggggagcgttccg 131545 Score = 954 bits (481), Expect = 0.0 Identities = 543/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 104765 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 104822 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104823 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 104882 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104883 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 104942 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 104943 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 105002 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105003 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 105062 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105063 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 105122 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 105123 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 105182 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105183 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 105242 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 105243 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 105302 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 105303 acatcggtaggggagcgttccg 105324
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 948 bits (478), Expect = 0.0 Identities = 546/567 (96%), Gaps = 7/567 (1%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 138921 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 138864 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138863 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 138804 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138803 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 138744 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138743 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 138684 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacagggg 299 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138683 ggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacagggg 138624 Query: 300 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138623 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 138564 Query: 360 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 419 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 138563 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagaga 138504 Query: 420 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 479 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138503 cagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgat 138444 Query: 480 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138443 cgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgta 138384 Query: 540 aaaatgcatcggtaggggagcgttccg 566 ||||||||||||||||||||||||||| Sbjct: 138383 aaaatgcatcggtaggggagcgttccg 138357 Score = 948 bits (478), Expect = 0.0 Identities = 546/567 (96%), Gaps = 7/567 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 111024 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 111081 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111082 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 111141 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111142 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 111201 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 111202 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 111261 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaataacagggg 299 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111262 ggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaataacagggg 111321 Query: 300 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111322 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 111381 Query: 360 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 419 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 111382 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagaga 111441 Query: 420 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 479 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 111442 cagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgat 111501 Query: 480 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111502 cgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgta 111561 Query: 540 aaaatgcatcggtaggggagcgttccg 566 ||||||||||||||||||||||||||| Sbjct: 111562 aaaatgcatcggtaggggagcgttccg 111588
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135636 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 135579 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135578 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 135519 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135518 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 135459 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 135458 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 135399 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135398 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 135339 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135338 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 135279 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 135278 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 135219 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135218 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 135159 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135158 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 135099 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 135098 acatcggtaggggagcgttccg 135077 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106994 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 107051 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107052 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 107111 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107112 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 107171 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 107172 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 107231 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107232 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 107291 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107292 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107351 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 107352 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 107411 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107412 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 107471 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107472 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107531 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 107532 acatcggtaggggagcgttccg 107553
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 142215 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 142158 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142157 ggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 142098 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142097 gttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgttgag 142038 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 142037 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 141978 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141977 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 141918 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141917 gtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatca 141858 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 141857 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagcc 141798 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141797 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 141738 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141737 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 141678 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 141677 acatcggtaggggagcgttccg 141656 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 111113 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 111170 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111171 ggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 111230 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111231 gttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaatgcgttgag 111290 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 111291 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 111350 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111351 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 111410 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111411 gtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatca 111470 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 111471 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagcc 111530 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111531 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 111590 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111591 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 111650 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 111651 acatcggtaggggagcgttccg 111672
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 2188 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 2245 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 2305 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2306 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 2365 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 2366 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 2425 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2426 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 2485 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2486 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 2545 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 2546 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 2605 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2606 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 2665 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2666 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 2725 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 2726 acatcggtaggggagcgttccg 2747
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 663 attgtcactgcttatgg-acccgaacctgggtgatctatctatg-accaggatgaagctt 720 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 721 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 780 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 840 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 841 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 900 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 901 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaag 960 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 gtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatca 1020 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1021 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1080 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1081 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1140 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 1200 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 1201 gcatcggtaggggagcgttccg 1222
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 134882 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 134825 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134824 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 134765 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134764 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 134705 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134704 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 134645 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134644 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 134585 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134584 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 134525 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134524 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 134465 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134464 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134405 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134404 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 134345 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 134344 acatcggtaggggagcgttccg 134323 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106154 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106211 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106212 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106271 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106272 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106331 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106332 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106391 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106392 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 106451 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106452 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106511 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106512 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106571 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106572 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106631 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106632 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 106691 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 106692 acatcggtaggggagcgttccg 106713
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 132334 attgtcactgcttatgg-acccgaacctgggtgatctatctatg-accaggatgaagctt 132277 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 132276 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 132217 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132216 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 132157 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 132156 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 132097 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 132096 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaag 132037 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132036 gtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatca 131977 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 131976 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 131917 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131916 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 131857 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131856 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 131797 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 131796 gcatcggtaggggagcgttccg 131775 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 104430 attgtcactgcttatgg-acccgaacctgggtgatctatctatg-accaggatgaagctt 104487 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 104488 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 104547 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104548 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 104607 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 104608 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 104667 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 104668 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaag 104727 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104728 gtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatca 104787 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 104788 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 104847 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104848 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 104907 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104908 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 104967 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 104968 gcatcggtaggggagcgttccg 104989
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135017 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 134960 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134959 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 134900 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134899 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 134840 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134839 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 134780 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134779 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 134720 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134719 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 134660 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134659 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 134600 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134599 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134540 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134539 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 134480 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 134479 acatcggtaggggagcgttccg 134458 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106326 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106383 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106384 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106443 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106444 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106503 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106504 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106563 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106564 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 106623 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106624 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106683 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106684 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106743 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106744 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106803 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106804 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 106863 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 106864 acatcggtaggggagcgttccg 106885
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135015 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 134958 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134957 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 134898 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134897 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 134838 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134837 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 134778 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134777 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 134718 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134717 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 134658 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134657 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 134598 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134597 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134538 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134537 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 134478 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 134477 acatcggtaggggagcgttccg 134456 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106323 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106380 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106440 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106441 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106500 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106501 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106560 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106561 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 106620 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106621 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106680 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106681 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106740 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106741 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106800 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106801 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 106860 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 106861 acatcggtaggggagcgttccg 106882
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 134927 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 134870 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134869 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 134810 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134809 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 134750 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134749 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 134690 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134689 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 134630 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134629 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 134570 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134569 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 134510 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134509 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134450 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134449 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 134390 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 134389 acatcggtaggggagcgttccg 134368 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106201 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106258 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106259 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106318 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106319 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106378 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106379 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106438 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 106439 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 106498 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106499 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106558 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106559 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106618 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106619 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106678 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106679 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 106738 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 106739 acatcggtaggggagcgttccg 106760
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 133295 attgtcactgcttatgg-acccgaacctgggtgatctatctatg-accaggatgaagctt 133238 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 133237 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 133178 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133177 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 133118 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 133117 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 133058 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 133057 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaag 132998 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132997 gtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatca 132938 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 132937 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 132878 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132877 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 132818 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132817 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 132758 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 132757 gcatcggtaggggagcgttccg 132736 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 105354 attgtcactgcttatgg-acccgaacctgggtgatctatctatg-accaggatgaagctt 105411 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105412 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 105471 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105472 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 105531 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 105532 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 105591 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 105592 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataactggggtcaag 105651 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105652 gtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatca 105711 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 105712 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 105771 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105772 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 105831 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105832 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 105891 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 105892 gcatcggtaggggagcgttccg 105913
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135634 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 135577 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135576 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 135517 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135516 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 135457 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 135456 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 135397 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135396 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 135337 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135336 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 135277 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 135276 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 135217 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 135216 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 135157 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135156 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 135097 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 135096 acatcggtaggggagcgttccg 135075 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106992 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 107049 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107050 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 107109 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107110 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 107169 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 107170 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 107229 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107230 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 107289 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107290 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107349 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 107350 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 107409 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107410 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 107469 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107470 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107529 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 107530 acatcggtaggggagcgttccg 107551
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 135365 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 135308 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135307 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 135248 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135247 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 135188 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 135187 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 135128 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135127 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 135068 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135067 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 135008 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 135007 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 134948 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134947 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134888 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 134887 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 134828 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 134827 acatcggtaggggagcgttccg 134806 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106773 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106830 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106831 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106890 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106950 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106951 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 107010 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107011 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 107070 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107071 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 107130 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 107131 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 107190 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 107191 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 107250 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 107251 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 107310 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 107311 acatcggtaggggagcgttccg 107332
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 139045 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 138988 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138987 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 138928 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138927 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 138868 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138867 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 138808 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 138807 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaag 138748 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138747 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 138688 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 138687 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 138628 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138627 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 138568 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138567 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 138508 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 138507 acatcggtaggggagcgttccg 138486 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 110254 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 110311 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110312 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 110371 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110372 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 110431 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 110432 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 110491 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 110492 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataataggggtcaag 110551 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110552 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 110611 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 110612 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 110671 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110672 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 110731 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110732 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 110791 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 110792 acatcggtaggggagcgttccg 110813
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 946 bits (477), Expect = 0.0 Identities = 542/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 761 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 818 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 878 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 879 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 938 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 939 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 998 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 999 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 1058 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 1118 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 1119 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagcc 1178 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1179 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1238 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1239 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 1298 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 1299 acatcggtaggggagcgttccg 1320
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 938 bits (473), Expect = 0.0 Identities = 541/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 131127 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 131070 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131069 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 131010 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131009 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 130950 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 130949 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 130890 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130889 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaag 130830 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130829 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 130770 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 130769 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 130710 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130709 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 130650 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 130649 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaa 130590 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 130589 acatcggtaggggagcgttccg 130568 Score = 938 bits (473), Expect = 0.0 Identities = 541/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 102318 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 102375 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102376 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 102435 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102436 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 102495 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 102496 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 102555 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 102556 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaag 102615 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102616 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 102675 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 102676 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 102735 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102736 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 102795 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 102796 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaa 102855 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 102856 acatcggtaggggagcgttccg 102877
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 938 bits (473), Expect = 0.0 Identities = 541/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 134894 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 134837 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134836 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 134777 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134776 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 134717 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134716 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 134657 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 134656 ggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaag 134597 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134596 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 134537 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 134536 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 134477 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 134476 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 134417 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 134416 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 134357 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 134356 acatcggtaggggagcgttccg 134335 Score = 938 bits (473), Expect = 0.0 Identities = 541/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 106168 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106225 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106285 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106345 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106346 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106405 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 106406 ggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataacaggggtcaag 106465 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 gtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106525 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106526 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106585 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106586 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106645 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 106646 gctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaat 106705 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 106706 acatcggtaggggagcgttccg 106727
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 930 bits (469), Expect = 0.0 Identities = 540/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 131203 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 131146 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131145 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 131086 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131085 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 131026 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 131025 gcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 130966 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 130965 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaag 130906 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130905 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 130846 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 130845 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaacc 130786 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 130785 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 130726 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 130725 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaa 130666 Query: 545 gcatcggtaggggagcgttccg 566 | |||||||||||||||||||| Sbjct: 130665 gaatcggtaggggagcgttccg 130644 Score = 930 bits (469), Expect = 0.0 Identities = 540/562 (96%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 104191 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 104248 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104249 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 104308 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 104368 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 104369 gcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 104428 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 104429 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaagggtcaag 104488 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104489 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 104548 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || Sbjct: 104549 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaacc 104608 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104609 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 104668 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104669 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaa 104728 Query: 545 gcatcggtaggggagcgttccg 566 | |||||||||||||||||||| Sbjct: 104729 gaatcggtaggggagcgttccg 104750
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 922 bits (465), Expect = 0.0 Identities = 539/562 (95%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 670 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 727 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 787 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 847 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 848 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 907 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 908 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaag 967 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 968 gtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatca 1027 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1028 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1087 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1088 aggaggtttgcctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1147 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 1148 gctcttgcgccgaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaa 1207 Query: 545 gcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 1208 acatcggtaggggagcgttccg 1229
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 922 bits (465), Expect = 0.0 Identities = 539/562 (95%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 129866 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 129809 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129808 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 129749 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129748 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 129689 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 129688 gcgcagcagttgaccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 129629 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| Sbjct: 129628 ggtaccaaatcgaggcaaactctgaatactagatatgacctgaaaataataagggtcaag 129569 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 129568 gtcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatca 129509 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 129508 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 129449 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 129448 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 129389 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 129388 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 129329 Query: 545 gcatcggtaggggagcgttccg 566 | |||||||||||||||||||| Sbjct: 129328 gaatcggtaggggagcgttccg 129307 Score = 922 bits (465), Expect = 0.0 Identities = 539/562 (95%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 102590 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 102647 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102648 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 102707 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102708 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 102767 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 102768 gcgcagcagttgaccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 102827 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| Sbjct: 102828 ggtaccaaatcgaggcaaactctgaatactagatatgacctgaaaataataagggtcaag 102887 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 102888 gtcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatca 102947 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 102948 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 103007 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103008 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 103067 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 103068 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 103127 Query: 545 gcatcggtaggggagcgttccg 566 | |||||||||||||||||||| Sbjct: 103128 gaatcggtaggggagcgttccg 103149
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 918 bits (463), Expect = 0.0 Identities = 538/562 (95%), Gaps = 9/562 (1%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 134320 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 134263 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134262 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 134203 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134202 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 134143 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 134142 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 134083 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 134082 ggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaag 134030 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134029 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 133970 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 133969 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 133910 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 133909 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 133850 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 133849 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 133790 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 133789 gcatcggtaggggagcgttccg 133768 Score = 918 bits (463), Expect = 0.0 Identities = 538/562 (95%), Gaps = 9/562 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 105962 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 106019 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106020 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 106079 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106080 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 106139 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 106140 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 106199 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct: 106200 ggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------gggtcaag 106252 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106253 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 106312 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106313 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 106372 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 106373 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 106432 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106433 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 106492 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 106493 gcatcggtaggggagcgttccg 106514
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 916 bits (462), Expect = 0.0 Identities = 540/563 (95%), Gaps = 3/563 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 1159 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 1216 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1217 gggtgaaactaagtgagggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 1276 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1277 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 1336 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 1337 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 1396 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1397 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaag 1456 Query: 305 gtcggccagtgagacgat-gggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1457 gtcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccggatc 1516 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1517 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1576 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1577 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1636 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1637 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1696 Query: 544 tgcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 1697 aacatcggtaggggagcgttccg 1719
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 916 bits (462), Expect = 0.0 Identities = 482/487 (98%), Gaps = 2/487 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 465 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 522 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 582 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 642 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 702 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 762 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 822 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 882 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 942 Query: 481 gagcgcc 487 ||||||| Sbjct: 943 gagcgcc 949
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 908 bits (458), Expect = 0.0 Identities = 520/539 (96%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 645 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 702 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 762 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 822 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 823 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 882 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 883 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaag 942 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 1002 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| Sbjct: 1003 ccagctaaggcccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagcc 1062 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1063 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1122 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1123 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1181
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 904 bits (456), Expect = 0.0 Identities = 503/517 (97%), Gaps = 2/517 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 122546 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 122489 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 122488 gcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagt 122429 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122428 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 122369 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122368 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 122309 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 122308 gagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggatt 122249 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 122248 caaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctgg 122189 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122188 atcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagac 122129 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122128 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatc 122069 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcga 517 ||||||||||||||||||||||||||||||||||||| Sbjct: 122068 gagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 904 bits (456), Expect = 0.0 Identities = 503/517 (97%), Gaps = 2/517 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 12825087 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 12825030 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 12825029 gcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagt 12824970 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824969 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 12824910 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824909 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 12824850 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 12824849 gagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataataggatt 12824790 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 12824789 caaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctgg 12824730 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12824729 atcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagac 12824670 Query: 421 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12824669 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatc 12824610 Query: 481 gagcgcccttgcgctgaagatgaacggggctaagcga 517 ||||||||||||||||||||||||||||||||||||| Sbjct: 12824609 gagcgcccttgcgctgaagatgaacggggctaagcga 12824573
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 904 bits (456), Expect = 0.0 Identities = 536/561 (95%), Gaps = 2/561 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| || ||||| Sbjct: 672 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatggagctt 729 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 789 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 849 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 850 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 909 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 910 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaag 969 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 gtcggccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatca 1029 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||| Sbjct: 1030 ccagctaaggcccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagcc 1089 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 | |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1090 acgaggtttgcctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1149 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 1150 gctcttgcgcccaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaat 1209 Query: 545 gcatcggtaggggagcgttcc 565 ||||||||||||||||||||| Sbjct: 1210 gcatcggtaggggagcgttcc 1230
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 904 bits (456), Expect = 0.0 Identities = 536/561 (95%), Gaps = 2/561 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 683 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 740 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 800 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 860 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 861 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 920 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 921 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggttaag 980 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 981 gtcggccagtgagaccatgggggataagcttcatcgtccagagggaaacagcccggatca 1040 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1041 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 1100 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 1101 aagaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatccagc 1160 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1161 gctcttgcgcccaaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 1220 Query: 545 gcatcggtaggggagcgttcc 565 ||||| ||||||||||||||| Sbjct: 1221 gcatccgtaggggagcgttcc 1241
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 904 bits (456), Expect = 0.0 Identities = 536/561 (95%), Gaps = 2/561 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 684 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 741 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 801 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 861 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| Sbjct: 862 gcgcagcagttgactggacatctaagggtaaagcactgtttcggtgcgggccgcgagagc 921 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 922 ggtaccaaatcgaggcaaactctgaatactaaatatgacctcaaaataacaggggttaag 981 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 982 gtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatca 1041 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1042 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagcc 1101 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 | |||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1102 aagaggtttgcctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgagc 1161 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1162 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaat 1221 Query: 545 gcatcggtaggggagcgttcc 565 ||||| ||||||||||||||| Sbjct: 1222 gcatccgtaggggagcgttcc 1242
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 902 bits (455), Expect = 0.0 Identities = 541/564 (95%), Gaps = 5/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 2432 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 2489 Query: 65 ggntgaaactaagcagagg-tccgaaccgactgatgttgaagaatcagcggatgagttgt 123 || |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2490 gggtgaaactaagtggagggtccgaaccgactgatgttgaagaatcagcggatgagttgt 2549 Query: 124 ggttaggggtgaaatg-ccactcgaacccagagctagctggttctccccgaaatgcgttg 182 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2550 ggttaggggtgaaatggccactcgaacccagagctagctggttctccccgaaatgcgttg 2609 Query: 183 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcga 242 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 2610 aggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgaga 2669 Query: 243 gcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtca 302 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2670 gcggtaccaaatcgaggcaaactctgaatactagatatgactcaaaa-taacaggggtca 2728 Query: 303 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 362 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2729 aggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacagtccggat 2788 Query: 363 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 422 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 2789 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 2848 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 2849 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcga 2908 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2909 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaa 2968 Query: 543 atgcatcggtaggggagcgttccg 566 || ||||||||||||||||||||| Sbjct: 2969 atacatcggtaggggagcgttccg 2992
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 868 bits (438), Expect = 0.0 Identities = 532/562 (94%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 684 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 741 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 801 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 861 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 862 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 921 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 ||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 922 agtaccaaatcgaggcaaactctgaatactagatatgacc------tcacaggggttaag 975 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 976 gtcggccaatgagacgatgggggataagcttcatcttccagagggaaacagcccggatca 1035 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1036 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagcc 1095 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1096 acgaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 1155 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| || |||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 1156 gctcttgcgcccaaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaat 1215 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||||| Sbjct: 1216 gcatcggtaggggagcgttccg 1237
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 858 bits (433), Expect = 0.0 Identities = 536/565 (94%), Gaps = 6/565 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacct--gggtgatctatccatgnaccaggntgaagc 62 ||||||||||||| ||| ||||||||| |||||||||||||||| |||||| |||||| Sbjct: 678 attgtcactgcttatgg-acccgaaccctggggtgatctatccatg-accaggatgaagc 735 Query: 63 ttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttg 122 |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 ttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttg 795 Query: 123 tggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaaatgcgtt 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 796 tggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaaatgcgtt 855 Query: 182 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 856 gaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgag 915 Query: 242 agcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtc 301 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 916 agcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataacaagggtc 975 Query: 302 aaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgga 361 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 976 aaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaacagccctga 1035 Query: 362 tcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 421 ||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 1036 tcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagaca 1095 Query: 422 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 481 ||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1096 gccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctcactgatcg 1154 Query: 482 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 541 ||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 1155 agcgctcttgcgccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaa 1214 Query: 542 aatgcatcggtaggggagcgttccg 566 || |||||||||||||||||||||| Sbjct: 1215 aaggcatcggtaggggagcgttccg 1239
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 856 bits (432), Expect = 0.0 Identities = 535/569 (94%), Gaps = 16/569 (2%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 139696 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 139639 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139638 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 139579 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139578 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 139519 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 139518 gcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 139459 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||| || || |||| ||||||| Sbjct: 139458 ggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaag 139406 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139405 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 139346 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 139345 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 139286 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 139285 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 139226 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------g 537 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139225 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaag 139166 Query: 538 tcaaaatgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||||||||| Sbjct: 139165 taaaaatgcatcggtaggggagcgttccg 139137 Score = 856 bits (432), Expect = 0.0 Identities = 535/569 (94%), Gaps = 16/569 (2%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 110364 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 110421 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110422 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 110481 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110482 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 110541 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 110542 gcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 110601 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||| || || |||| ||||||| Sbjct: 110602 ggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaag 110654 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110655 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 110714 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 110715 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 110774 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110775 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 110834 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat-------g 537 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110835 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaag 110894 Query: 538 tcaaaatgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||||||||| Sbjct: 110895 taaaaatgcatcggtaggggagcgttccg 110923
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 846 bits (427), Expect = 0.0 Identities = 533/564 (94%), Gaps = 4/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||| ||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 666 attgtcactacttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 723 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 724 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 783 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 843 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 844 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 903 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tca 302 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| | | Sbjct: 904 cggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataacaggggataa 963 Query: 303 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 362 ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 964 aggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagat 1023 Query: 363 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 422 ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 1024 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacag 1083 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1084 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 1143 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 1144 gcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaa 1203 Query: 543 atgcatcggtaggggagcgttccg 566 || ||||||||||||||||||||| Sbjct: 1204 atacatcggtaggggagcgttccg 1227
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 844 bits (426), Expect = 0.0 Identities = 507/533 (95%), Gaps = 9/533 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 149 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 206 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 266 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 326 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 327 gcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 386 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||| || || |||| ||||||| Sbjct: 387 ggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaag 439 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 499 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 500 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 559 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 560 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 619 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 537 || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 842 bits (425), Expect = 0.0 Identities = 526/554 (94%), Gaps = 5/554 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 177508 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 177565 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 177566 gggtgaaactaagtggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtg 177624 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177625 gttaggggtgaaatgccactcgcacccagagctagctggttctccccgaaatgcgttgag 177684 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct: 177685 gcgcagcagttgactggacatctaggggtaaagcacggtttcggtgcgggccgcgagagc 177744 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt-caa 303 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| Sbjct: 177745 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataagaggggggcaa 177804 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177805 ggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaagagcccggatc 177864 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 177865 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 177924 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 177925 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 177984 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaa 542 ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177985 cgctcttgcgccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaa 178044 Query: 543 atgcatcggtaggg 556 || |||||| |||| Sbjct: 178045 atacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 372 aggcccctaaatgaccgctcag 393 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 839 bits (423), Expect = 0.0 Identities = 532/564 (94%), Gaps = 4/564 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 52022 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 51965 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51964 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 51905 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51904 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 51845 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||| Sbjct: 51844 gcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagc 51785 Query: 245 ggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaa 303 ||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| || Sbjct: 51784 ggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaa 51725 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51724 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 51665 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacag 422 |||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||| Sbjct: 51664 accagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacag 51605 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 51604 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 51545 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 51544 gcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaa 51485 Query: 543 atgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 51484 agacatcggtaggggagcgttccg 51461 Score = 839 bits (423), Expect = 0.0 Identities = 532/564 (94%), Gaps = 4/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 37806 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 37863 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37864 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 37923 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37924 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 37983 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||| Sbjct: 37984 gcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagc 38043 Query: 245 ggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaa 303 ||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| || Sbjct: 38044 ggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaa 38103 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38104 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 38163 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacag 422 |||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||| Sbjct: 38164 accagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacag 38223 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 38224 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 38283 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 38284 gcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaa 38343 Query: 543 atgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 38344 agacatcggtaggggagcgttccg 38367
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 839 bits (423), Expect = 0.0 Identities = 532/564 (94%), Gaps = 4/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 4734 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 4791 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4792 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 4851 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4852 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 4911 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||| Sbjct: 4912 gcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagc 4971 Query: 245 ggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaa 303 ||||||||||||| |||||||||||||||||| |||||||| | |||||| |||||| || Sbjct: 4972 ggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataataggggtaaa 5031 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5032 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 5091 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacag 422 |||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||| Sbjct: 5092 accagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacag 5151 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 5152 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 5211 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 5212 gcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaa 5271 Query: 543 atgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 5272 agacatcggtaggggagcgttccg 5295
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 827 bits (417), Expect = 0.0 Identities = 533/569 (93%), Gaps = 9/569 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 663 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 720 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 tggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 780 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 840 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||| Sbjct: 841 gcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagc 900 Query: 245 ggtaccaaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaa 303 ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| || Sbjct: 901 ggtaccaaatcgaagcaaactctgaatactagaatatgacctaaaaataacaggggtaaa 960 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 961 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatc 1020 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1021 accagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagc 1080 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 1081 caggaggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgag 1140 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg------ 537 ||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1141 cgctcttgcgccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaa 1200 Query: 538 tcaaaatgcatcggtaggggagcgttccg 566 | ||||| ||||||||||||||||||||| Sbjct: 1201 taaaaatacatcggtaggggagcgttccg 1229
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 815 bits (411), Expect = 0.0 Identities = 529/564 (93%), Gaps = 4/564 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||| ||| ||| |||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 117483 attgtcactacttatgg-acccgaacctgggtgatctaaccatg-accaggatgaagctt 117426 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117425 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 117366 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117365 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 117306 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 117305 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 117246 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 303 ||||||||||||||||||||||||||||||||||||||| || |||||| ||||| || Sbjct: 117245 cggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaa 117186 Query: 304 -ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 362 |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 117185 tggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagat 117126 Query: 363 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 422 |||||||||||||||||||||||||||| |||| |||||||||| || |||||||||||| Sbjct: 117125 caccagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacag 117066 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 117065 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 117006 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 117005 gcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaa 116946 Query: 543 atgcatcggtaggggagcgttccg 566 || ||||||||||||||||||||| Sbjct: 116945 atacatcggtaggggagcgttccg 116922 Score = 815 bits (411), Expect = 0.0 Identities = 529/564 (93%), Gaps = 4/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||| ||| ||| |||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 90619 attgtcactacttatgg-acccgaacctgggtgatctaaccatg-accaggatgaagctt 90676 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90677 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 90736 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90737 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 90796 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 90797 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 90856 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 303 ||||||||||||||||||||||||||||||||||||||| || |||||| ||||| || Sbjct: 90857 cggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatagggggtaa 90916 Query: 304 -ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 362 |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 90917 tggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagat 90976 Query: 363 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 422 |||||||||||||||||||||||||||| |||| |||||||||| || |||||||||||| Sbjct: 90977 caccagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacag 91036 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 91037 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 91096 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 91097 gcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaa 91156 Query: 543 atgcatcggtaggggagcgttccg 566 || ||||||||||||||||||||| Sbjct: 91157 atacatcggtaggggagcgttccg 91180
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 809 bits (408), Expect = 0.0 Identities = 492/519 (94%), Gaps = 9/519 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 165 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 222 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 223 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 282 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gttaggggtgaaatgccgctcgaacccagagctagctggttctccccgaaatgcgttgag 342 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 343 gcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 402 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||| || || |||| ||||||| Sbjct: 403 ggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa-------ggtcaag 455 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 515 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 516 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagcc 575 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 576 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 635 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgcc 523 || ||||||| |||||||||||||||||||||||||||| Sbjct: 636 gctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 809 bits (408), Expect = 0.0 Identities = 528/563 (93%), Gaps = 7/563 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 86929 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 86986 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86987 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 87046 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87047 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 87106 Query: 185 gcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 |||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 87107 gcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccgcgagag 87166 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 303 ||||||||||||||||||||||||||||||||||| || ||| ||||| |||||| | Sbjct: 87167 cggtaccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaag 87222 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 87223 ggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatc 87282 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 87283 accagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagc 87342 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 87343 caggaggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgag 87402 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 87403 cgctcttgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaa 87462 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 87463 tacatcggtaggggagcgttccg 87485
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 807 bits (407), Expect = 0.0 Identities = 528/564 (93%), Gaps = 4/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||| ||| ||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 666 attgtcactacttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctc 723 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 724 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 783 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 843 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 844 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 903 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg-tca 302 ||||||||||||||||||||||||||||||||||||||| | |||||| |||| | | Sbjct: 904 cggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacgggggataa 963 Query: 303 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 362 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 964 gggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagat 1023 Query: 363 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 422 ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 1024 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacag 1083 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1084 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 1143 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 1144 gcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaa 1203 Query: 543 atgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 1204 aaacatcggtaggggagcgttccg 1227
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 775 bits (391), Expect = 0.0 Identities = 529/569 (92%), Gaps = 9/569 (1%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 145893 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 145836 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 145835 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 145776 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 145775 gttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgag 145716 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 145715 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 145656 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaataacagg- 297 ||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||| Sbjct: 145655 cggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacagga 145596 Query: 298 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 357 ||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 145595 ggtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcc 145536 Query: 358 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 417 | |||||||||||||||||||||||||||||||||||| | |||||||| || ||||| | Sbjct: 145535 cagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcaga 145476 Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 145475 gacagccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 145416 Query: 478 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 537 ||| ||||| ||||||| ||| ||||||||| ||||||| |||||||||||||||||||| Sbjct: 145415 atcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatg 145356 Query: 538 tcaaaatgcatcggtaggggagcgttccg 566 |||||| ||||||||||||||||||||| Sbjct: 145355 tcaaaaaacatcggtaggggagcgttccg 145327 Score = 775 bits (391), Expect = 0.0 Identities = 529/569 (92%), Gaps = 9/569 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 112569 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 112626 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112627 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 112686 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112687 gttaggggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgag 112746 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 112747 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 112806 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatga--cccaa---aaataacagg- 297 ||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||| Sbjct: 112807 cggtaccaaatcgaggcaaactctgaatactaggtatgatctccaaatgaaagaacagga 112866 Query: 298 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 357 ||| |||||| |||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 112867 ggtaaaggtcagccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcc 112926 Query: 358 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 417 | |||||||||||||||||||||||||||||||||||| | |||||||| || ||||| | Sbjct: 112927 cagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcaga 112986 Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112987 gacagccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactg 113046 Query: 478 atcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 537 ||| ||||| ||||||| ||| ||||||||| ||||||| |||||||||||||||||||| Sbjct: 113047 atcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatg 113106 Query: 538 tcaaaatgcatcggtaggggagcgttccg 566 |||||| ||||||||||||||||||||| Sbjct: 113107 tcaaaaaacatcggtaggggagcgttccg 113135
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 767 bits (387), Expect = 0.0 Identities = 523/563 (92%), Gaps = 6/563 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 89015 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 89072 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 89073 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 89132 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89133 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 89192 Query: 185 gcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 |||||||||||||||||| ||||||||||||||||||||||||||| ||||| || ||| Sbjct: 89193 gcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggccacgagag 89252 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 303 ||||||||||||||||||||||||||||||||||| | ||||| | || ||||| | Sbjct: 89253 cggtaccaaatcgaggcaaactctgaatactagat-taccccaata--aaagggggtaag 89309 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 89310 ggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatc 89369 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 89370 accagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagc 89429 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 89430 caggaggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgag 89489 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 89490 cgctcgtgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaa 89549 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 89550 tacatcggtaggggagcgttccg 89572
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 759 bits (383), Expect = 0.0 Identities = 406/412 (98%), Gaps = 2/412 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 575 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 632 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 692 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 752 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 812 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 872 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 932 Query: 361 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 412 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 933 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 751 bits (379), Expect = 0.0 Identities = 521/564 (92%), Gaps = 4/564 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 670 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 727 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 728 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 787 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 847 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 848 gcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctgcgagag 907 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag-gggtca 302 ||||||||||||||||||||||||||||||| |||| ||| | ||||| || | || | Sbjct: 908 cggtaccaaatcgaggcaaactctgaatactggataggactccctaataatagagagtaa 967 Query: 303 aggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggat 362 |||| |||||||||| ||||||||||||||||| |||||||||| |||||||| ||| Sbjct: 968 gggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagat 1027 Query: 363 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 422 |||| ||||||||||||||||||||||| |||| |||||||||| || |||||||||||| Sbjct: 1028 caccggctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacag 1087 Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| | Sbjct: 1088 ccaggaggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaa 1147 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||| ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||| Sbjct: 1148 gcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaa 1207 Query: 543 atgcatcggtaggggagcgttccg 566 || ||||||||||||||||||||| Sbjct: 1208 atacatcggtaggggagcgttccg 1231
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 726 bits (366), Expect = 0.0 Identities = 386/391 (98%), Gaps = 2/391 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 460 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 517 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 577 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 637 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 697 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 757 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 817 Query: 361 atcaccagctaaggcccctaaatgaccgctc 391 ||||||||||||||||||||||||||||||| Sbjct: 818 atcaccagctaaggcccctaaatgaccgctc 848
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 726 bits (366), Expect = 0.0 Identities = 516/563 (91%), Gaps = 3/563 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 |||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 127775 attgtcactgctcatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 127718 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 127717 gggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 127658 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127657 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 127598 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 |||||||||||||| |||| | |||||||||||||||||||||||||||||||||| || Sbjct: 127597 gcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaag 127538 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 303 ||||||||||||||||||||||||||||||||| |||||||| || ||| ||| | Sbjct: 127537 cggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaag 127478 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 127477 ggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatc 127418 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 ||||||||||||||||||||||| |||||||| |||||||||| || ||||||||||||| Sbjct: 127417 accagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagc 127358 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 127357 caggaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaag 127298 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| Sbjct: 127297 cgctcttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaag 127238 Query: 544 tgcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 127237 gacatcggtaggggagcgttccg 127215 Score = 726 bits (366), Expect = 0.0 Identities = 516/563 (91%), Gaps = 3/563 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 |||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 95672 attgtcactgctcatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 95729 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || | |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95730 gggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 95789 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95790 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 95849 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 |||||||||||||| |||| | |||||||||||||||||||||||||||||||||| || Sbjct: 95850 gcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaag 95909 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa 303 ||||||||||||||||||||||||||||||||| |||||||| || ||| ||| | Sbjct: 95910 cggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaag 95969 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 95970 ggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatc 96029 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 ||||||||||||||||||||||| |||||||| |||||||||| || ||||||||||||| Sbjct: 96030 accagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagc 96089 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 96090 caggaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaag 96149 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||| ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| Sbjct: 96150 cgctcttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaag 96209 Query: 544 tgcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 96210 gacatcggtaggggagcgttccg 96232
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 698 bits (352), Expect = 0.0 Identities = 372/377 (98%), Gaps = 2/377 (0%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 668 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 725 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 785 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 845 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 905 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 965 Query: 301 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccgg 1025 Query: 361 atcaccagctaaggccc 377 ||||||||||||||||| Sbjct: 1026 atcaccagctaaggccc 1042
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 652 bits (329), Expect = 0.0 Identities = 469/515 (91%), Gaps = 1/515 (0%) Strand = Plus / Minus Query: 52 caggntgaagcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 111 |||| || ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 112 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 171 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 172 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 231 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 232 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 291 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 292 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 351 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 352 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 411 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 412 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 471 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 2752 tgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagc 2693 Query: 472 tcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 531 ||||| ||||||||| ||||| | |||||||| ||||||||||||||| |||||| | Sbjct: 2692 tcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctat 2633 Query: 532 gggatgtcaaaatgcatcggtaggggagcgttccg 566 ||||||||||||||||||| ||||||||||||||| Sbjct: 2632 gggatgtcaaaatgcatcgataggggagcgttccg 2598
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 632 bits (319), Expect = e-178 Identities = 319/319 (100%) Strand = Plus / Minus Query: 248 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 308 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 368 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 428 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 488 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 548 tcggtaggggagcgttccg 566 ||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccg 201
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 615 bits (310), Expect = e-173 Identities = 481/534 (90%), Gaps = 5/534 (0%) Strand = Plus / Plus Query: 7 tgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagcttgg 66 ||||| ||||| ||| |||||||| ||||||||||| ||||| |||| | |||| |||| Sbjct: 671 tgtcattgcttatgg-acccgaacttgggtgatctaaccatg-accaagatgaaatttgg 728 Query: 67 ntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 126 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 ttgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 788 Query: 127 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 |||||||||||||||| || |||||| |||||| ||||||||||||||||||||| |||| Sbjct: 789 taggggtgaaatgccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggc 848 Query: 187 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 246 |||| |||| || ||||||||||||||||||||||||||||| |||| ||| |||| | Sbjct: 849 gcagaagtt-accagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccg 907 Query: 247 taccaaatcgaggcaaactctgaatactagatatgacc--caaaaataacaggggtcaag 304 |||||||| |||||||||| |||||||||||||||||| |||||||||||||| | ||| Sbjct: 908 taccaaattgaggcaaactatgaatactagatatgacctccaaaaataacagggataaag 967 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 || | |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 968 gtggaccagtgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatca 1027 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 |||||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||| || Sbjct: 1028 ccagctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaacc 1087 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1088 aggaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagc 1147 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 || ||||||| ||| ||||| ||| ||||||| | |||||||||||||||||| Sbjct: 1148 gctcttgcgccgaatatgaatgggaataagcgacccgccgaagctgtgggatgt 1201
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 611 bits (308), Expect = e-171 Identities = 354/368 (96%), Gaps = 1/368 (0%) Strand = Plus / Plus Query: 199 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 258 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 259 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 318 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 319 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 379 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 438 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 439 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 498 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 499 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 558 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 559 gcgttccg 566 |||||||| Sbjct: 676 gcgttccg 683 Score = 285 bits (144), Expect = 8e-74 Identities = 170/177 (96%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 124 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 181 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 241 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 298
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 599 bits (302), Expect = e-168 Identities = 503/565 (89%), Gaps = 7/565 (1%) Strand = Plus / Minus Query: 7 tgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagcttgg 66 |||| |||||| ||| ||||||||| |||||||||||||||| |||||| |||||||||| Sbjct: 138600 tgtcgctgcttatgg-acccgaacccgggtgatctatccatg-accaggatgaagcttgg 138543 Query: 67 ntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 126 | ||| | | ||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 138542 atagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggt 138483 Query: 127 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138482 taggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggc 138423 Query: 187 gcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 245 ||||| ||||||| | | | || | |||||||||||||| |||||||||||||| |||| Sbjct: 138422 gcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagca 138363 Query: 246 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaa 303 |||||||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| || Sbjct: 138362 gtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaa 138303 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 138302 ggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatc 138243 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||| ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 138242 accagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagc 138183 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 | ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| || Sbjct: 138182 cgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaag 138123 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 541 ||| | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 138122 cgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaac 138063 Query: 542 aatgcatcggtaggggagcgttccg 566 ||| ||||||||||||||||||||| Sbjct: 138062 aatacatcggtaggggagcgttccg 138038 Score = 599 bits (302), Expect = e-168 Identities = 503/565 (89%), Gaps = 7/565 (1%) Strand = Plus / Plus Query: 7 tgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagcttgg 66 |||| |||||| ||| ||||||||| |||||||||||||||| |||||| |||||||||| Sbjct: 83277 tgtcgctgcttatgg-acccgaacccgggtgatctatccatg-accaggatgaagcttgg 83334 Query: 67 ntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 126 | ||| | | ||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 83335 atagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggt 83394 Query: 127 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 83395 taggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggc 83454 Query: 187 gcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 245 ||||| ||||||| | | | || | |||||||||||||| |||||||||||||| |||| Sbjct: 83455 gcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagca 83514 Query: 246 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaa 303 |||||||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| || Sbjct: 83515 gtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaa 83574 Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 ||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 83575 ggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatc 83634 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||| ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 83635 accagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagc 83694 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 | ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| || Sbjct: 83695 cgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaag 83754 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 541 ||| | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 83755 cgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaac 83814 Query: 542 aatgcatcggtaggggagcgttccg 566 ||| ||||||||||||||||||||| Sbjct: 83815 aatacatcggtaggggagcgttccg 83839
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 597 bits (301), Expect = e-167 Identities = 301/301 (100%) Strand = Plus / Plus Query: 266 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 326 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 386 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 446 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 506 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 566 g 566 | Sbjct: 301 g 301
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 575 bits (290), Expect = e-161 Identities = 310/315 (98%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 313 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 256 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 196 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 136 Query: 181 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 tgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgc 76 Query: 241 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75 gagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggt 16 Query: 301 caaggtcggccagtg 315 ||||||||||||||| Sbjct: 15 caaggtcggccagtg 1
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 561 bits (283), Expect = e-157 Identities = 330/344 (95%), Gaps = 2/344 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 364847 attgtcactgcttatgg-acccgaacctgggtgatctatctatg-accaggatgaagctt 364904 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 364905 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 364964 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364965 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 365024 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 365025 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 365084 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 365085 ggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataacaggggtcaag 365144 Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagg 348 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 365145 gtcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 343 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 402 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 403 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 461 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 462 gcgtaatagctcactg 477 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 551 bits (278), Expect = e-154 Identities = 319/331 (96%), Gaps = 2/331 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 46921 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 46978 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46979 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 47038 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47039 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 47098 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 47099 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 47158 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaag 304 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47159 ggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacaggggtcaag 47218 Query: 305 gtcggccagtgagacgatgggggataagctt 335 ||||||||||||||||||||||||||||||| Sbjct: 47219 gtcggccagtgagacgatgggggataagctt 47249
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 705 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 764 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 765 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 824 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 825 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 883 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 884 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 943 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 944 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1004 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1063 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1064 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1123 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1124 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 488 bits (246), Expect = e-134 Identities = 418/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 488 bits (246), Expect = e-134 Identities = 246/246 (100%) Strand = Plus / Minus Query: 321 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 381 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 441 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 501 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 561 gttccg 566 |||||| Sbjct: 63649 gttccg 63644
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| |||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 705 tgaaactaagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggtt 764 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 765 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 824 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 825 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 883 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 884 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 943 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 944 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1004 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1063 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1064 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1123 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1124 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| | ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagcttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 480 bits (242), Expect = e-132 Identities = 418/473 (88%), Gaps = 4/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagc-gtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 883 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 884 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 943 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 944 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1004 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1063 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1064 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1123 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1124 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 480 bits (242), Expect = e-132 Identities = 417/473 (88%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 || ||| || ||| ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagtcgtt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 478 bits (241), Expect = e-131 Identities = 241/241 (100%) Strand = Plus / Plus Query: 326 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 386 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 446 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 506 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 566 g 566 | Sbjct: 241 g 241
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 464 bits (234), Expect = e-127 Identities = 415/473 (87%), Gaps = 3/473 (0%) Strand = Plus / Plus Query: 68 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 127 |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 706 tgaaactaagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggtt 765 Query: 128 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 187 |||||||||||| || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 766 aggggtgaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcg 825 Query: 188 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 247 ||| || | | || ||||||||||||||||| ||||||||| || ||| ||||||| Sbjct: 826 gagccgtatccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggt 884 Query: 248 accaaatcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaagg 305 ||||||| |||||||||| |||||| |||||||||| ||||||||||||||| | |||| Sbjct: 885 accaaattgaggcaaactatgaatattagatatgacttccaaaaataacagggataaagg 944 Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 | | |||| ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 945 tggaccagcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||||||||||| || ||| ||||||||||| |||||||| | ||| ||| Sbjct: 1005 tagctaaggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaacca 1064 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 ||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| | Sbjct: 1065 ggaagtttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtg 1124 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 | |||| || ||| ||||||||| || || ||| ||||||| ||||||||| Sbjct: 1125 ctcttgtgccgaatatgaacgggaataggcaatccaccgaagccgtgggatgt 1177
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 448 bits (226), Expect = e-123 Identities = 274/290 (94%) Strand = Plus / Minus Query: 277 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 336 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 337 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 396 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 397 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 456 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 457 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 517 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 351
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 446 bits (225), Expect = e-122 Identities = 267/278 (96%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 4555 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 4612 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4613 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 4672 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4673 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 4732 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 4733 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 4792 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatg 281 ||||||||||||||||||||||||||||||||| |||| Sbjct: 4793 cggtaccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 5098 tacatcggtaggggagcgttccg 5120
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 446 bits (225), Expect = e-122 Identities = 267/278 (96%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 665 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 722 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 723 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 782 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 842 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 843 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 902 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatg 281 ||||||||||||||||||||||||||||||||| |||| Sbjct: 903 cggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccg 1230
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 446 bits (225), Expect = e-122 Identities = 267/278 (96%), Gaps = 3/278 (1%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 150580 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 150523 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150522 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 150463 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150462 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 150403 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 150402 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 150343 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatg 281 ||||||||||||||||||||||||||||||||| |||| Sbjct: 150342 cggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 446 bits (225), Expect = e-122 Identities = 267/278 (96%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 118086 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 118143 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 118144 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 118203 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118204 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 118263 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 118264 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 118323 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatg 281 ||||||||||||||||||||||||||||||||| |||| Sbjct: 118324 cggtaccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Minus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 150037 tacatcggtaggggagcgttccg 150015 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 118629 tacatcggtaggggagcgttccg 118651
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 446 bits (225), Expect = e-122 Identities = 267/278 (96%), Gaps = 3/278 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 665 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 722 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 723 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 782 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 842 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 843 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 902 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatg 281 ||||||||||||||||||||||||||||||||| |||| Sbjct: 903 cggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccg 1230
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 444 bits (224), Expect = e-121 Identities = 263/273 (96%), Gaps = 3/273 (1%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 115545 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 115488 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115487 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 115428 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115427 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 115368 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 115367 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 115308 Query: 244 cggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||||||||||||||||||| Sbjct: 115307 cggtaccaaatcgaggcaaactctgaatactag 115275 Score = 444 bits (224), Expect = e-121 Identities = 263/273 (96%), Gaps = 3/273 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 86575 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 86632 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86633 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 86692 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86693 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 86752 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 86753 gcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcgagag 86812 Query: 244 cggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||||||||||||||||||| Sbjct: 86813 cggtaccaaatcgaggcaaactctgaatactag 86845 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Minus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 115006 tacatcggtaggggagcgttccg 114984 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 544 tgcatcggtaggggagcgttccg 566 | ||||||||||||||||||||| Sbjct: 87114 tacatcggtaggggagcgttccg 87136
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 434 bits (219), Expect = e-118 Identities = 263/276 (95%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 4894 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 4951 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4952 aggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 5011 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5012 gttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 5071 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 5072 gcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagc 5131 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatat 280 |||||||||||||||||||||||||||||||||||| Sbjct: 5132 ggtaccaaatcgaggcaaactctgaatactagatat 5167 Score = 432 bits (218), Expect = e-118 Identities = 251/262 (95%) Strand = Plus / Plus Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 545 gcatcggtaggggagcgttccg 566 | |||||||||||||||||||| Sbjct: 5422 gaatcggtaggggagcgttccg 5443
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 434 bits (219), Expect = e-118 Identities = 263/276 (95%), Gaps = 2/276 (0%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 23031 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 22974 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22973 aggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 22914 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22913 gttagcggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 22854 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 22853 gcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagc 22794 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatat 280 |||||||||||||||||||||||||||||||||||| Sbjct: 22793 ggtaccaaatcgaggcaaactctgaatactagatat 22758 Score = 432 bits (218), Expect = e-118 Identities = 251/262 (95%) Strand = Plus / Minus Query: 305 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 365 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 424 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 425 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 484 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 485 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 544 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 545 gcatcggtaggggagcgttccg 566 | |||||||||||||||||||| Sbjct: 22503 gaatcggtaggggagcgttccg 22482
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 434 bits (219), Expect = e-118 Identities = 259/271 (95%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 297 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 355 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 356 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 415 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 416 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 475 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 476 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 535 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 536 tgtcaaaatgcatcggtaggggagcgttccg 566 ||| |||||| |||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccg 5715 Score = 428 bits (216), Expect = e-117 Identities = 266/281 (94%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||||| || Sbjct: 5162 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagttt 5219 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5220 aggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 5279 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5280 gttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgag 5339 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 5340 gcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagc 5399 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgaccc 285 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5400 ggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 434 bits (219), Expect = e-118 Identities = 259/271 (95%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 297 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 355 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 356 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 415 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 416 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 475 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 476 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 535 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 536 tgtcaaaatgcatcggtaggggagcgttccg 566 ||| |||||| |||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccg 5715 Score = 428 bits (216), Expect = e-117 Identities = 266/281 (94%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| ||||| || Sbjct: 5162 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagttt 5219 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5220 aggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 5279 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5280 gttagcggtgaaatgccaatcgaacccagagctagctggttctccccgaaatgcgttgag 5339 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 |||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 5340 gcgcagcagttgactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagc 5399 Query: 245 ggtaccaaatcgaggcaaactctgaatactagatatgaccc 285 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5400 ggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 426 bits (215), Expect = e-116 Identities = 263/276 (95%), Gaps = 3/276 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 652 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 709 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 710 gggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtg 769 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 829 Query: 185 gcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 ||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| Sbjct: 830 gcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccgcgagag 889 Query: 244 cggtaccaaatcgaggcaaactctgaatactagata 279 ||||||||||||||||||||||||||||||| |||| Sbjct: 890 cggtaccaaatcgaggcaaactctgaatactggata 925 Score = 375 bits (189), Expect = e-100 Identities = 240/257 (93%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 549 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 550 ggtaggggagcgttccg 566 ||||||||||||||||| Sbjct: 1195 ggtaggggagcgttccg 1211
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 410 bits (207), Expect = e-111 Identities = 246/257 (95%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||||||||| |||||| |||||||||| |||||||||| ||| Sbjct: 144605 acccgaacctgggtgatctatccatg-accaggatgaagcttgggtgaaactaagtggag 144663 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 144664 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 144723 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 144724 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactaga 144783 Query: 203 -catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 144784 ccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggca 144843 Query: 262 aactctgaatactagat 278 ||||||||||||||||| Sbjct: 144844 aactctgaatactagat 144860 Score = 410 bits (207), Expect = e-111 Identities = 246/257 (95%), Gaps = 2/257 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||||||||| |||||| |||||||||| |||||||||| ||| Sbjct: 88246 acccgaacctgggtgatctatccatg-accaggatgaagcttgggtgaaactaagtggag 88188 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 88187 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 88128 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 88127 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactaga 88068 Query: 203 -catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 88067 ccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggca 88008 Query: 262 aactctgaatactagat 278 ||||||||||||||||| Sbjct: 88007 aactctgaatactagat 87991 Score = 383 bits (193), Expect = e-103 Identities = 241/257 (93%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 549 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 550 ggtaggggagcgttccg 566 ||||||||||||||||| Sbjct: 145139 ggtaggggagcgttccg 145155 Score = 383 bits (193), Expect = e-103 Identities = 241/257 (93%) Strand = Plus / Minus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 549 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 550 ggtaggggagcgttccg 566 ||||||||||||||||| Sbjct: 87712 ggtaggggagcgttccg 87696
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 402 bits (203), Expect = e-109 Identities = 224/231 (96%) Strand = Plus / Plus Query: 328 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 388 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 447 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 448 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 507 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 508 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 558 |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga 487
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 392 bits (198), Expect = e-106 Identities = 233/243 (95%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 193 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 250 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 310 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 370 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 244 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 371 gcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 430 Query: 245 ggt 247 ||| Sbjct: 431 ggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 373 bits (188), Expect = e-100 Identities = 220/229 (96%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 189 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 246 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 306 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 307 gttaggggtgaaatgccactcgaacccagagctagctggctctccccgaaatgcgttgag 366 Query: 185 gcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 233 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 361 bits (182), Expect = 2e-96 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 542 aatgcatcggtaggggagcgttccg 566 | |||||||||||||||||||||| Sbjct: 1303 agggcatcggtaggggagcgttccg 1327 Score = 351 bits (177), Expect = 2e-93 Identities = 254/277 (91%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||| ||||||||||| ||| ||||||||| |||||||||| ||||| ||||| |||| Sbjct: 778 ggcgaatgtcactgcttatgg-acccgaacccgggtgatctaaccatgg-ccagggtgaa 835 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 836 gcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagc 895 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 896 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 955 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 956 tgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 1015 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||||||||||||||||||||| Sbjct: 1016 aaagcggtaccaaatcgaggcaaactctgaatactag 1052
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 361 bits (182), Expect = 2e-96 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 542 aatgcatcggtaggggagcgttccg 566 | |||||||||||||||||||||| Sbjct: 1186 agggcatcggtaggggagcgttccg 1210 Score = 351 bits (177), Expect = 2e-93 Identities = 254/277 (91%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||| ||||||||||| ||| ||||||||| |||||||||| ||||| ||||| |||| Sbjct: 661 ggcgaatgtcactgcttatgg-acccgaacccgggtgatctaaccatgg-ccagggtgaa 718 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 719 gcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagc 778 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 779 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 838 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 839 tgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 898 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||||||||||||||||||||| Sbjct: 899 aaagcggtaccaaatcgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 361 bits (182), Expect = 2e-96 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 541 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 542 aatgcatcggtaggggagcgttccg 566 | |||||||||||||||||||||| Sbjct: 1199 agggcatcggtaggggagcgttccg 1223 Score = 351 bits (177), Expect = 2e-93 Identities = 254/277 (91%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||| ||||||||||| ||| ||||||||| |||||||||| ||||| ||||| |||| Sbjct: 674 ggcgaatgtcactgcttatgg-acccgaacccgggtgatctaaccatgg-ccagggtgaa 731 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 732 gcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagc 791 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 792 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 851 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 852 tgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 911 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||||||||||||||||||||| Sbjct: 912 aaagcggtaccaaatcgaggcaaactctgaatactag 948
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 274 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 333 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 334 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 394 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 453 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 454 taaagagtgcgtaatagctca 474 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 359 bits (181), Expect = 6e-96 Identities = 259/282 (91%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 |||||||||||||| || ||| ||||||||| |||||||||||||||| |||||| |||| Sbjct: 662 ggcgattgtcactgtttatgg-acccgaacccgggtgatctatccatg-accaggatgaa 719 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 281 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 900 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 262 bits (132), Expect = 1e-66 Identities = 225/256 (87%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 548 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 549 cggtaggggagcgttc 564 |||||||||||||||| Sbjct: 1191 cggtaggggagcgttc 1206
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 359 bits (181), Expect = 6e-96 Identities = 259/282 (91%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 |||||||||||||| || ||| ||||||||| |||||||||||||||| |||||| |||| Sbjct: 3696 ggcgattgtcactgtttatgg-acccgaacccgggtgatctatccatg-accaggatgaa 3753 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3754 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 3813 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 3814 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 3873 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 3874 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 3933 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 281 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3934 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975 Score = 270 bits (136), Expect = 5e-69 Identities = 226/256 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 548 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 549 cggtaggggagcgttc 564 |||||||||||||||| Sbjct: 4225 cggtaggggagcgttc 4240
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 274 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 333 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 334 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 393 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 394 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 453 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 454 taaagagtgcgtaatagctca 474 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 355 bits (179), Expect = 1e-94 Identities = 239/258 (92%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 546 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 547 atcggtaggggagcgttc 564 |||||||||||||||||| Sbjct: 1193 atcggtaggggagcgttc 1210 Score = 327 bits (165), Expect = 2e-86 Identities = 251/277 (90%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| |||| Sbjct: 662 ggcgattgtcactgcttatgg-acccgaacccgggtgatctatccatgg-ccaggatgaa 719 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 720 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagc 779 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||||||||||||||||||||| Sbjct: 900 aaagcggtaccaaatcgaggcaaactctgaatactag 936
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 330 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 389 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 390 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 449 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 450 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 510 ctaagcgatctgccgaagctgtgggatgtcaaaat 544 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 330 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 389 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 390 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 449 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 450 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 510 ctaagcgatctgccgaagctgtgggatgtcaaaat 544 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 353 bits (178), Expect = 4e-94 Identities = 255/278 (91%), Gaps = 3/278 (1%) Strand = Plus / Minus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 5882 attgtcactgctttatggacccgaacctgggtgatctatccatg-accaggatgaagct- 5825 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 5824 ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtg 5765 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5764 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 5705 Query: 185 gcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgag 243 |||||||||||||||||| | ||||||||||||||||||||||||| ||| | | || Sbjct: 5704 gcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaag 5645 Query: 244 cggtaccaaatcgaggcaaactctgaatactagatatg 281 |||||| | ||||||||||||| ||||||||||||||| Sbjct: 5644 cggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 347 bits (175), Expect = 2e-92 Identities = 241/263 (91%) Strand = Plus / Minus Query: 304 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 363 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 364 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 423 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 424 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 483 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 484 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 543 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 544 tgcatcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 5362 aacatcggtaggggagcgttccg 5340
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 351 bits (177), Expect = 2e-93 Identities = 258/282 (91%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 |||||||||||||| || ||| ||||||||| |||||||||||||||| |||||| |||| Sbjct: 662 ggcgattgtcactgtttatgg-acccgaacccgggtgatctatccatg-accaggatgaa 719 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| | |||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 281 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 900 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 254 bits (128), Expect = 3e-64 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 548 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 549 cggtaggggagcgttc 564 |||||||||||||||| Sbjct: 1190 cggtaggggagcgttc 1205
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 343 bits (173), Expect = 4e-91 Identities = 215/229 (93%) Strand = Plus / Plus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtc 1140 Score = 323 bits (163), Expect = 4e-85 Identities = 237/260 (91%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||||||||| ||||| |||| ||||| |||| | ||| ||| Sbjct: 638 acccgaacccgggtgatctatccatgg-ccagggtgaaacttgggtgaagccaagtggag 696 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 697 gtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 756 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 757 ctcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattgattgga 816 Query: 203 c-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 817 ctacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggca 876 Query: 262 aactctgaatactagatatg 281 ||||||||||||||| |||| Sbjct: 877 aactctgaatactaggtatg 896
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 341 bits (172), Expect = 2e-90 Identities = 217/232 (93%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 124081 Score = 341 bits (172), Expect = 2e-90 Identities = 217/232 (93%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 540 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 95785 Score = 311 bits (157), Expect = 1e-81 Identities = 249/277 (89%), Gaps = 3/277 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| |||| Sbjct: 124603 ggcgattgtcactgcttatgg-acccgaacccgggtgatctatccatgg-ccaggatgaa 124546 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 124545 gcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagc 124486 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||||||||| Sbjct: 124485 tgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 124426 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 124425 tgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcg 124366 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||| ||||||||||||||||| Sbjct: 124365 aaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 311 bits (157), Expect = 1e-81 Identities = 249/277 (89%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| ||||||||| |||||||||||||||| ||||| |||| Sbjct: 95263 ggcgattgtcactgcttatgg-acccgaacccgggtgatctatccatgg-ccaggatgaa 95320 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 95321 gcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagc 95380 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||||||||| Sbjct: 95381 tgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgt 95440 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||| | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 95441 tgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgcg 95500 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactag 276 ||||||||||||||||| ||||||||||||||||| Sbjct: 95501 aaagcggtaccaaatcgagtcaaactctgaatactag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 339 bits (171), Expect = 6e-90 Identities = 240/261 (91%), Gaps = 2/261 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||| ||||||||||| ||||| |||||| |||| |||| |||||||||| ||| Sbjct: 699 acccgaacttgggtgatctaaccatg-accaggatgaaatttggttgaaactaagtggag 757 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 817 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || ||| Sbjct: 818 atcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-accgga 876 Query: 203 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 262 |||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct: 877 catctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaa 936 Query: 263 actctgaatactagatatgac 283 ||| ||||||||||||||||| Sbjct: 937 actatgaatactagatatgac 957 Score = 335 bits (169), Expect = 9e-89 Identities = 235/257 (91%), Gaps = 5/257 (1%) Strand = Plus / Plus Query: 308 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 367 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 368 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 427 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 428 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 487 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 488 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 547 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 548 tcggtaggggagcgttc 564 ||||||||||||||||| Sbjct: 1235 tcggtaggggagcgttc 1251
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 337 bits (170), Expect = 2e-89 Identities = 170/170 (100%) Strand = Plus / Plus Query: 397 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 457 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 517 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 170
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 4e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 337 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 396 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 397 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 456 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 457 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 516 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 517 atctgccgaagctgtgggat 536 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 331 bits (167), Expect = 1e-87 Identities = 238/261 (91%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 545 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 546 catcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 1155 catcggtaggggagcgttccg 1175 Score = 283 bits (143), Expect = 3e-73 Identities = 250/283 (88%), Gaps = 3/283 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||| |||||||| || ||| ||||||||| |||||||||||||||| ||||| |||| Sbjct: 624 ggcgaatgtcactgtttatgg-acccgaacccgggtgatctatccatgg-ccaggatgaa 681 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 | |||| |||||| || ||||||||||||||||| ||||||| || || |||||||| Sbjct: 682 gtttgggtgaaaccaaatggaggtccgaaccgactggtgttgaaaaaccaacggatgagc 741 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 742 tgtggataggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 801 Query: 181 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 239 ||||||||||| ||||||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 802 tgaggcgcagcggttgactagactatttaggggtaaagcactgtttcggtgcgggctgtg 861 Query: 240 cgagcggtaccaaatcgaggcaaactctgaatactagatatga 282 | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 862 aaaacggtaccaaattgatgcaaactctgaatactaaatatga 904
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 315 bits (159), Expect = 9e-83 Identities = 231/255 (90%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 552 taggggagcgttccg 566 ||||||||||||||| Sbjct: 1207 taggggagcgttccg 1221 Score = 311 bits (157), Expect = 1e-81 Identities = 234/258 (90%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| |||||||||| ||| Sbjct: 694 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtgaaactaagtggag 752 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||| Sbjct: 753 gtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgcca 812 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 813 ctcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgga 872 Query: 203 c-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 873 ctatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagaca 932 Query: 262 aactctgaatactagata 279 ||||||||||||| |||| Sbjct: 933 aactctgaatactggata 950
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 315 bits (159), Expect = 9e-83 Identities = 231/255 (90%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 552 taggggagcgttccg 566 ||||||||||||||| Sbjct: 5245 taggggagcgttccg 5259 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 4732 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaactaagtggag 4790 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||| Sbjct: 4791 gtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgcca 4850 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||| | Sbjct: 4851 ctcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgca 4910 Query: 203 c-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | ||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 4911 ctatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggca 4970 Query: 262 aactctgaatact 274 ||||||||||||| Sbjct: 4971 aactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 315 bits (159), Expect = 9e-83 Identities = 231/255 (90%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 552 taggggagcgttccg 566 ||||||||||||||| Sbjct: 1212 taggggagcgttccg 1226 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 699 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaactaagtggag 757 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||| Sbjct: 758 gtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgcca 817 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||| | Sbjct: 818 ctcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgca 877 Query: 203 c-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | ||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 878 ctatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggca 937 Query: 262 aactctgaatact 274 ||||||||||||| Sbjct: 938 aactctgaatact 950
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 532 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 303 bits (153), Expect = 3e-79 Identities = 248/277 (89%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 7 tgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagcttgg 66 |||||||| || ||| ||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 1071 tgtcactgtttatgg-acccgaacccgggtgatctatccatgg-ccagggtgaagcttgg 1128 Query: 67 ntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 126 |||| | ||| |||| |||||||||||| ||||||| || ||||||||||| |||||| Sbjct: 1129 gtgaagccaagtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggt 1188 Query: 127 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1189 taggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggc 1248 Query: 187 gcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 245 ||||| |||||| || | ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 gcagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcg 1308 Query: 246 gtaccaaatcgaggcaaactctgaatactagatatga 282 |||||||||||||||||||||||||||||||| |||| Sbjct: 1309 gtaccaaatcgaggcaaactctgaatactagacatga 1345 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 1601 atcggtaggggagcgttccg 1620
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 80 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 139 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 140 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 199 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 260 caaactctgaatactagatat 280 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 552 taggggagcgttccg 566 ||||||||||||||| Sbjct: 1212 taggggagcgttccg 1226 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 699 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaactaagtggag 757 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||| Sbjct: 758 gtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgcca 817 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||||| | |||||||||||||||||||||||||||||||||||||||| || |||| | Sbjct: 818 ctcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgca 877 Query: 203 c-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | ||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 878 ctatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggca 937 Query: 262 aactctgaatact 274 ||||||||||||| Sbjct: 938 aactctgaatact 950
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 301 bits (152), Expect = 1e-78 Identities = 172/177 (97%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 75034 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 74977 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74976 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 74917 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74916 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 301 bits (152), Expect = 1e-78 Identities = 172/177 (97%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 382504 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 382561 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382562 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 382621 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382622 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 301 bits (152), Expect = 1e-78 Identities = 172/177 (97%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 113125 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 113068 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113067 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 113008 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 177 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113007 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 301 bits (152), Expect = 1e-78 Identities = 175/181 (96%), Gaps = 2/181 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 367807 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 367750 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367749 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 367690 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 367689 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgt 367630 Query: 181 t 181 | Sbjct: 367629 t 367629 Score = 301 bits (152), Expect = 1e-78 Identities = 175/181 (96%), Gaps = 2/181 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 184412 ggcgattgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaa 184355 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184354 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 184295 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 184294 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgt 184235 Query: 181 t 181 | Sbjct: 184234 t 184234 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 418 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 gtcgagagggaaacagcccggatc 363 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 293 bits (148), Expect = 3e-76 Identities = 170/176 (96%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 391 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 450 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 451 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 510 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 511 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg 175
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 291 bits (147), Expect = 1e-75 Identities = 173/180 (96%), Gaps = 2/180 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 638 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 695 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 755 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 252 bits (127), Expect = 1e-63 Identities = 226/258 (87%), Gaps = 4/258 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| || Sbjct: 694 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaaccaagtggaa 752 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 753 gtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcca 812 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt---tgact 199 |||||| | ||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 813 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaatgatg 872 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 || ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 873 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 932 Query: 260 caaactctgaatactaga 277 |||||| |||||||||| Sbjct: 933 caaactaagaatactaga 950 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccg 1261
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 289 bits (146), Expect = 5e-75 Identities = 232/258 (89%), Gaps = 5/258 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| | |||| ||| ||| Sbjct: 686 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtaaaaccaagtggag 744 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 745 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 804 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---t 199 |||||| | ||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 805 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaat 864 Query: 200 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 258 || | |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 865 gggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgta 924 Query: 259 gcaaactctgaatactag 276 ||||||| ||||||||| Sbjct: 925 gcaaactaagaatactag 942 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 532 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccg 1234
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 287 bits (145), Expect = 2e-74 Identities = 230/257 (89%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | ||||||| || || Sbjct: 681 acccgaacccgggtgatctaaccatgg-ccaggatgaagctttggtgaaactcagtggaa 739 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 740 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 799 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--g 200 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 800 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 859 Query: 201 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 860 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 919 Query: 261 aaactctgaatactaga 277 ||||||||||||||||| Sbjct: 920 aaactctgaatactaga 936 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 1181
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 287 bits (145), Expect = 2e-74 Identities = 230/257 (89%), Gaps = 3/257 (1%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | ||||||| || || Sbjct: 114981 acccgaacccgggtgatctaaccatgg-ccaggatgaagctttggtgaaactcagtggaa 114923 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 114922 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 114863 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--g 200 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 114862 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 114803 Query: 201 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 114802 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 114743 Query: 261 aaactctgaatactaga 277 ||||||||||||||||| Sbjct: 114742 aaactctgaatactaga 114726 Score = 287 bits (145), Expect = 2e-74 Identities = 230/257 (89%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | ||||||| || || Sbjct: 87007 acccgaacccgggtgatctaaccatgg-ccaggatgaagctttggtgaaactcagtggaa 87065 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 87066 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 87125 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--g 200 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 87126 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 87185 Query: 201 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 87186 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 87245 Query: 261 aaactctgaatactaga 277 ||||||||||||||||| Sbjct: 87246 aaactctgaatactaga 87262 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Minus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 114481 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 539 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 87507
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 285 bits (144), Expect = 8e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 543 atgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccg 20727
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 280 bits (141), Expect = 5e-72 Identities = 235/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| ||| || ||| || Sbjct: 6376 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtgataccaagtgaag 6434 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 201 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 202 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 261 aaactctgaatactagatatgac 283 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 280 bits (141), Expect = 5e-72 Identities = 235/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| ||| || ||| || Sbjct: 3439 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtgataccaagtgaag 3497 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 201 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 202 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 261 aaactctgaatactagatatgac 283 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 280 bits (141), Expect = 5e-72 Identities = 235/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| ||| || ||| || Sbjct: 727 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtgataccaagtgaag 785 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 201 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 202 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 261 aaactctgaatactagatatgac 283 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 274 bits (138), Expect = 3e-70 Identities = 231/261 (88%), Gaps = 2/261 (0%) Strand = Plus / Plus Query: 306 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 365 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 366 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 425 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 426 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 485 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 486 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 545 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 546 catcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccg 1206 Score = 216 bits (109), Expect = 6e-53 Identities = 222/258 (86%), Gaps = 7/258 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| ||||||||| |||||| | || Sbjct: 677 acccgaacccgggtgatctaaccatgg-ccaggaggaagcttgggtgaaaccttgtggaa 735 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| || |||||||| || |||||||||||||||||||||||||||| ||| Sbjct: 736 gtccgaaccgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaatacca 795 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga----- 197 |||||| | ||||||||||||||||||||||||||||||||||||||| || || Sbjct: 796 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaag 855 Query: 198 ctggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 256 ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 atgggcagtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 257 aggcaaactctgaatact 274 ||||||| ||||||| Sbjct: 916 tagcaaactaagaatact 933
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 200 bits (101), Expect = 4e-48 Identities = 156/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 304 acccgaacccgggtgatctaaccatgt-ccaggatgaagcttgggtaaaaccaagtggag 362 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 363 gtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcca 422 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 196 |||||||| ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 423 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 269 aatac 273 ||||| Sbjct: 550 aatac 554
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 272 bits (137), Expect = 1e-69 Identities = 244/276 (88%), Gaps = 5/276 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||| ||| ||| ||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 800 attgtcacttcttatgg-acccgaacccgggtgatctaaccatgg-ccaggatgaagctt 857 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||| Sbjct: 858 gggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtg 917 Query: 125 gttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 184 |||||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 918 gttaggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgag 977 Query: 185 gcgcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcg 241 ||||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 978 gcgcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgag 1037 Query: 242 agcggtaccaaatcgaggcaaactctgaatactaga 277 ||||||||||||||| ||||||| |||||||||| Sbjct: 1038 agcggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 534 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 272 bits (137), Expect = 1e-69 Identities = 226/254 (88%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 114748 acccgaacccgggtgatctaaccatgg-ccagggtgaagcttgggtaaaactaagtggag 114690 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||| || | |||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 114689 gcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaatgcca 114630 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| | Sbjct: 114629 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgagatta 114570 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 114569 taacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggca 114510 Query: 262 aactctgaatacta 275 |||||||||||||| Sbjct: 114509 aactctgaatacta 114496 Score = 272 bits (137), Expect = 1e-69 Identities = 226/254 (88%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 2769 acccgaacccgggtgatctaaccatgg-ccagggtgaagcttgggtaaaactaagtggag 2827 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||| || | |||||||| ||| | ||||||||||||||||||||||||||||||| Sbjct: 2828 gcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaatgcca 2887 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| | Sbjct: 2888 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgagatta 2947 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2948 taacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggca 3007 Query: 262 aactctgaatacta 275 |||||||||||||| Sbjct: 3008 aactctgaatacta 3021 Score = 202 bits (102), Expect = 9e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 9e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 catcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 270 bits (136), Expect = 5e-69 Identities = 244/277 (88%), Gaps = 3/277 (1%) Strand = Plus / Plus Query: 7 tgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagcttgg 66 ||||| ||||| ||| |||||||| ||||||||||| ||||| |||||| || | |||| Sbjct: 659 tgtcattgcttgtgg-acccgaacttgggtgatctaaccatg-accaggatgcaatttgg 716 Query: 67 ntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 126 | |||||||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ttaaaactaagtgggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggt 776 Query: 127 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 |||||||||||||||| ||||||||| ||||||||||||| ||||||||||| || |||| Sbjct: 777 taggggtgaaatgccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggc 836 Query: 187 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 246 ||||||||| || || ||||||||||||||||| ||||| |||||||| || |||||| Sbjct: 837 gcagcagtt-accgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcgg 895 Query: 247 taccaaatcgaggcaaactctgaatactagatatgac 283 |||||||| |||||| ||| ||||||||||||||||| Sbjct: 896 taccaaattgaggcagactatgaatactagatatgac 932 Score = 196 bits (99), Expect = 6e-47 Identities = 235/279 (84%), Gaps = 6/279 (2%) Strand = Plus / Plus Query: 286 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 345 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 346 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 405 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 406 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 465 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 466 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 525 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 526 agctgtgggatgtcaaaatgcatcggtaggggagcgttc 564 ||||||||||||| |||||||||||||||||||| Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttc 1216
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 270 bits (136), Expect = 5e-69 Identities = 229/257 (89%), Gaps = 4/257 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| | |||| ||| || Sbjct: 750 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtaaaaccaagtggaa 808 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 809 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 868 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 200 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 869 atcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttg 928 Query: 201 -gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 929 agctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 988 Query: 260 caaactctgaatactag 276 |||||| ||||||||| Sbjct: 989 caaactaagaatactag 1005 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 534 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 262 bits (132), Expect = 1e-66 Identities = 229/258 (88%), Gaps = 3/258 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||| | | |||| || || Sbjct: 832 acccgaacccgggtgatctaaccatg-accaggatgaagcttcggtaaaacggagtggaa 890 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 891 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 950 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tgg 201 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || ||| Sbjct: 951 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgg 1010 Query: 202 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | ||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 1011 gcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagc 1070 Query: 261 aaactctgaatactagat 278 ||||| ||||||||||| Sbjct: 1071 aaactaagaatactagat 1088 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 1410 atcggtaggggagcgttccg 1429
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 268 bits (135), Expect = 2e-68 Identities = 224/252 (88%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 189606 acccgaacccggatgatctagccatgg-ccagggtgaagcttaggtaacactaagtggag 189664 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 189665 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaatgcca 189724 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 189725 atcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgctt 189784 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 189785 aatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggca 189844 Query: 262 aactctgaatac 273 |||||||||||| Sbjct: 189845 aactctgaatac 189856 Score = 268 bits (135), Expect = 2e-68 Identities = 224/252 (88%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 151033 acccgaacccggatgatctagccatgg-ccagggtgaagcttaggtaacactaagtggag 151091 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 151092 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaatgcca 151151 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 151152 atcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgctt 151211 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 ||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 151212 aatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggca 151271 Query: 262 aactctgaatac 273 |||||||||||| Sbjct: 151272 aactctgaatac 151283 Score = 222 bits (112), Expect = 1e-54 Identities = 220/255 (86%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 549 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 550 ggtaggggagcgttc 564 ||||||||||||||| Sbjct: 190110 ggtaggggagcgttc 190124 Score = 222 bits (112), Expect = 1e-54 Identities = 220/255 (86%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 549 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 550 ggtaggggagcgttc 564 ||||||||||||||| Sbjct: 151537 ggtaggggagcgttc 151551
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 262 bits (132), Expect = 1e-66 Identities = 228/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| ||| || ||| || Sbjct: 675 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtgacaccaagtgaag 733 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 201 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 202 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 262 aactctgaatactagata 279 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 532 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 182 bits (92), Expect = 8e-43 Identities = 163/185 (88%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 7 tgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagcttgg 66 |||| |||||| ||| ||||||||| |||||||||| ||||| |||||| |||||||| Sbjct: 660 tgtccctgcttatgg-acccgaacccgggtgatctaaccatg-accaggatgaagcttca 717 Query: 67 ntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 126 | ||| ||| ||||||||||||||| ||||||||| |||| || ||||||||||||| Sbjct: 718 gtaaaatgaagtggaggtccgaaccgaccgatgttgaaaaatcggctgatgagttgtggt 777 Query: 127 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 778 taggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggc 837 Query: 187 gcagc 191 ||||| Sbjct: 838 gcagc 842 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 204 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 263 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 264 ctctgaatactagata 279 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 262 bits (132), Expect = 1e-66 Identities = 228/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| ||| || ||| || Sbjct: 25484 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtgacaccaagtgaag 25542 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 201 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 202 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 262 aactctgaatactagata 279 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 260 bits (131), Expect = 4e-66 Identities = 226/255 (88%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 188683 acccgaacccggatgatctagccatgg-ccagggtgaagcttaggtaacactaagtggag 188741 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 188742 gtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcca 188801 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 200 ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 188802 atcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct- 188860 Query: 201 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 188861 taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggc 188920 Query: 261 aaactctgaatacta 275 ||||||||||||||| Sbjct: 188921 aaactctgaatacta 188935 Score = 252 bits (127), Expect = 1e-63 Identities = 225/255 (88%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 150240 acccgaacccggatgatctagccatgg-ccagggtgaagcttaggtaacactaagtggag 150298 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||| |||||| |||||||| ||| |||||||||||||||| |||||||||||||||| Sbjct: 150299 gtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcca 150358 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 200 ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150359 atcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct- 150417 Query: 201 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 150418 taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggc 150477 Query: 261 aaactctgaatacta 275 ||||||||||||||| Sbjct: 150478 aaactctgaatacta 150492 Score = 194 bits (98), Expect = 2e-46 Identities = 215/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 552 taggggagcgttc 564 ||||||||||||| Sbjct: 189189 taggggagcgttc 189201 Score = 194 bits (98), Expect = 2e-46 Identities = 215/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 552 taggggagcgttc 564 ||||||||||||| Sbjct: 150746 taggggagcgttc 150758
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 256 bits (129), Expect = 7e-65 Identities = 224/254 (88%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| ||| Sbjct: 2500 acccgaacccgggtgatctaaccatgg-ccagggtgaagcttaggtaaaactaaatggag 2558 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 2559 gcccgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgcca 2618 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 201 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 2619 atcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgtta 2678 Query: 202 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 || |||||||||||||||||||||||||||||| || ||| ||||||||||||||||| Sbjct: 2679 taatttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggca 2738 Query: 262 aactctgaatacta 275 |||||||||||||| Sbjct: 2739 aactctgaatacta 2752 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 322 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 381 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 382 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 441 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 442 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 501 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 502 gaacggggctaagcgatctgccgaagctgtgggatgt 538 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 3019 catcggtaggggagcgttccg 3039
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 252 bits (127), Expect = 1e-63 Identities = 222/252 (88%), Gaps = 2/252 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaacccgggtgatctaaccatgt-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||| ||||||||| || | Sbjct: 420 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgatta 479 Query: 203 catctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 |||||| |||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 480 aatctagggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagaca 539 Query: 262 aactctgaatac 273 ||||| |||||| Sbjct: 540 aactcagaatac 551 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 547 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 548 tcggtaggggagcgttccg 566 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 210 bits (106), Expect = 4e-51 Identities = 200/230 (86%), Gaps = 4/230 (1%) Strand = Plus / Plus Query: 52 caggntgaagcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 111 |||| |||| ||||| | | |||||| ||||||||||||||| ||||||||| |||| | Sbjct: 712 caggatgaaacttgggtaagactaagtggaggtccgaaccgaccgatgttgaaaaatcgg 771 Query: 112 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 171 ||||||| |||||||||||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 772 cggatgaactgtggttaggggtgaaatgccaatcgaactcggagctagctggttctcccc 831 Query: 172 gaaatgcgttgaggcgcagcagtt---gactggaca-tctaggggtaaagcactgtttcg 227 |||||||||||||||||||| ||| || | | | |||||||||| |||||||| ||| Sbjct: 832 gaaatgcgttgaggcgcagcggttgatgattaggctgtctaggggtagagcactgtctcg 891 Query: 228 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 277 |||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 892 gtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaatactaga 941
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 252 bits (127), Expect = 1e-63 Identities = 224/255 (87%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||| ||||| |||||| |||||||||| | |||| ||| || Sbjct: 663 acccgaacctgggtgatctaaccatg-accagggtgaagcttgggtaaaaccaagtggaa 721 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | ||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||||| Sbjct: 722 gcccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtgaaatgcca 781 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---agttgact 199 |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 782 atcgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggttgttgatg 841 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 || | || |||||||||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 842 ggtcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtgg 901 Query: 260 caaactctgaatact 274 |||||| ||||||| Sbjct: 902 caaactaagaatact 916 Score = 192 bits (97), Expect = 9e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 549 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 550 ggtaggggagcgttccg 566 ||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccg 1191
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 531 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 531 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 165 bits (83), Expect = 2e-37 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| | | || | || Sbjct: 170822 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtaacaccttgtggaa 170764 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 170763 gaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 170704 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 170703 atcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 165 bits (83), Expect = 2e-37 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| | | || | || Sbjct: 122104 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtaacaccttgtggaa 122162 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 122163 gaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 122222 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 122223 atcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 268 gaatact 274 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 268 gaatact 274 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 548 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 549 cggtaggggagcgttccg 566 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 198 bits (100), Expect = 1e-47 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 2384 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 2442 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2443 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 2502 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2503 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 269 aatac 273 ||||| Sbjct: 2630 aatac 2634
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 250 bits (126), Expect = 4e-63 Identities = 225/255 (88%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||||| |||||||| ||||| |||||| |||||||||| | |||| ||| ||| Sbjct: 693 acccgaacctgagtgatctaaccatg-accaggatgaagcttgggtaaaaccaagtggag 751 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 752 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 811 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tg 200 |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| | || Sbjct: 812 atcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgtcgatg 871 Query: 201 gacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | | | | |||||||||||||||||||| ||||||||| | ||||||||||||||| | Sbjct: 872 ggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttg 931 Query: 260 caaactctgaatact 274 |||||| ||||||| Sbjct: 932 caaactaagaatact 946 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 531 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 165 bits (83), Expect = 2e-37 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| | | || | || Sbjct: 695 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtaacaccttgtggaa 753 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 754 gaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 813 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 814 atcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 268 gaatact 274 ||||||| Sbjct: 960 gaatact 966
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 250 bits (126), Expect = 4e-63 Identities = 225/255 (88%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||||| |||||||| ||||| |||||| |||||||||| | |||| ||| ||| Sbjct: 2431 acccgaacctgagtgatctaaccatg-accaggatgaagcttgggtaaaaccaagtggag 2489 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2490 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 2549 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tg 200 |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| | || Sbjct: 2550 atcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgtcgatg 2609 Query: 201 gacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | | | | |||||||||||||||||||| ||||||||| | ||||||||||||||| | Sbjct: 2610 ggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttg 2669 Query: 260 caaactctgaatact 274 |||||| ||||||| Sbjct: 2670 caaactaagaatact 2684 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 80 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 139 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 140 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 199 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 200 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 256 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 257 aggcaaactctgaatactag 276 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 192 bits (97), Expect = 9e-46 Identities = 220/257 (85%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 368 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 489 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 547 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 548 tcggtaggggagcgttc 564 | ||||||||||||||| Sbjct: 1192 tgggtaggggagcgttc 1208
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 198 bits (100), Expect = 1e-47 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 302 acccgaacccgggtgatctaaccatgt-ccaggatgaagcttgggtaacaccaagtggag 360 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 361 gtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgcca 420 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 421 atcgaacccggagctagctggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 269 aatac 273 ||||| Sbjct: 548 aatac 552
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 360 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 269 aatac 273 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 5434683 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 5434625 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 5434624 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 5434565 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5434564 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5434516 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 3896755 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 3896813 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 3896814 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 3896873 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 3896874 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 3896922 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 2807404 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 2807346 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 2807345 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 2807286 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2807285 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2807237 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 1005598 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 1005656 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1005657 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 1005716 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1005717 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 1005765 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 269 aatac 273 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 269 aatac 273 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 269 aatac 273 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 269 aatac 273 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 7e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 5944723 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 5944665 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 5944664 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 5944605 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5944604 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5944556 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 4917079 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 4917021 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 4917020 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 4916961 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 4916960 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 4916912 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 2503217 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 2503275 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 2503276 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 2503335 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2503336 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2503384 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 2378426 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 2378484 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 2378485 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 2378544 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2378545 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2378593 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 269 aatac 273 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 269 aatac 273 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 269 aatac 273 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 269 aatac 273 ||||| Sbjct: 2378672 aatac 2378676
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 532 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 174 bits (88), Expect = 2e-40 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| || Sbjct: 700 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaacgaagtggaa 758 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| Sbjct: 759 gaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatacca 818 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 819 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 867 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 205 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 264 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 265 tctgaatactaga 277 || |||||||||| Sbjct: 944 tcagaatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 532 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 174 bits (88), Expect = 2e-40 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| || Sbjct: 2469 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaacgaagtggaa 2527 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| Sbjct: 2528 gaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatacca 2587 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2588 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 205 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 264 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 265 tctgaatactaga 277 || |||||||||| Sbjct: 2713 tcagaatactaga 2725
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 244 bits (123), Expect = 3e-61 Identities = 177/195 (90%) Strand = Plus / Plus Query: 80 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 139 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 2296 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatg 2355 Query: 140 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 199 ||| ||||| || ||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 2356 ccaatcgaatccggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaat 2415 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | | ||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 2416 ttaagcttgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatg 2475 Query: 260 caaactctgaatact 274 ||||||||||||||| Sbjct: 2476 caaactctgaatact 2490 Score = 236 bits (119), Expect = 6e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||||| ||| ||||||||| |||||| || ||||||||||||||||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat 2731
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 242 bits (122), Expect = 1e-60 Identities = 224/257 (87%), Gaps = 4/257 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 660 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaaccaagtggag 718 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 719 gtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcca 778 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gact 199 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 779 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcgacg 838 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 || |||||||||||||||||||||||||||||||| || || |||||||||||| | Sbjct: 839 ggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtag 898 Query: 260 caaactctgaatactag 276 |||||| ||||||||| Sbjct: 899 caaactaagaatactag 915 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 242 bits (122), Expect = 1e-60 Identities = 226/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 490 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 548 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 549 cggtaggggagcgttccg 566 |||||||||||||||||| Sbjct: 1181 cggtaggggagcgttccg 1198 Score = 159 bits (80), Expect = 1e-35 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| || ||| Sbjct: 671 acccgaacccgagtgatctaaccatgg-ccagggtgaagctttggtgagactgagtggag 729 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 730 gcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatgcca 789 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 790 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 838 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 268 gaatact 274 ||||||| Sbjct: 917 gaatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 242 bits (122), Expect = 1e-60 Identities = 226/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 490 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 548 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 549 cggtaggggagcgttccg 566 |||||||||||||||||| Sbjct: 1194 cggtaggggagcgttccg 1211 Score = 159 bits (80), Expect = 1e-35 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| || ||| Sbjct: 684 acccgaacccgagtgatctaaccatgg-ccagggtgaagctttggtgagactgagtggag 742 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 743 gcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatgcca 802 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 803 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 851 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 268 gaatact 274 ||||||| Sbjct: 930 gaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 242 bits (122), Expect = 1e-60 Identities = 226/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 490 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 548 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 549 cggtaggggagcgttccg 566 |||||||||||||||||| Sbjct: 5768 cggtaggggagcgttccg 5785 Score = 159 bits (80), Expect = 1e-35 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| || ||| Sbjct: 5258 acccgaacccgagtgatctaaccatgg-ccagggtgaagctttggtgagactgagtggag 5316 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 5317 gcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatgcca 5376 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5377 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 5425 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 268 gaatact 274 ||||||| Sbjct: 5504 gaatact 5510
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 240 bits (121), Expect = 4e-60 Identities = 222/254 (87%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| ||| Sbjct: 2443 acccgaacccggatgatctagtcatgg-ccagggtgaagcttaggtaacactaagtggag 2501 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 2502 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgcca 2561 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 2562 atcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttgatgcta 2621 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | | ||||||||||||||||||||||| ||||||| | |||||||||||||||||||| Sbjct: 2622 tagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcgaggca 2681 Query: 262 aactctgaatacta 275 |||||||||||||| Sbjct: 2682 aactctgaatacta 2695 Score = 163 bits (82), Expect = 8e-37 Identities = 215/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 490 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 548 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 549 cggtaggggagcgttc 564 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 214 bits (108), Expect = 2e-52 Identities = 219/254 (86%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 2217 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaaccaagtggag 2275 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2276 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2335 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2336 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2393 Query: 203 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 2394 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 2453 Query: 260 caaactctgaatac 273 |||||||||||||| Sbjct: 2454 caaactctgaatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 360 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 208 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 267 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 268 gaatact 274 ||||||| Sbjct: 546 gaatact 552
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 236 bits (119), Expect = 6e-59 Identities = 223/254 (87%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 360 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactg 200 ||||||| ||||||||||||||||||||||||| ||| ||||||||| || ||| | Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt- 478 Query: 201 gacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | |||| | |||||||||||||||||||||||||||| | || ||||||||||||||| Sbjct: 479 -atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgaga 537 Query: 260 caaactctgaatac 273 |||||||||||||| Sbjct: 538 caaactctgaatac 551 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 3e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 489 ttgcgctgaagatgaacggggctaag 514 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 190 bits (96), Expect = 3e-45 Identities = 151/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccccggtgatctaaccatgt-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 420 atcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 269 aatactagat 278 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 1e-57 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 544 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 545 gcatcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 167 bits (84), Expect = 5e-38 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgt-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 269 aatac 273 ||||| Sbjct: 547 aatac 551
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 232 bits (117), Expect = 1e-57 Identities = 221/254 (87%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 1132 acccgaacccgggtgatctaaccatgg-ccagggtgaagcttgggtaaaactaagtggag 1190 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1191 gcccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgcca 1250 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1251 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagatta 1310 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1311 taacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgca 1370 Query: 262 aactctgaatacta 275 |||| |||||||| Sbjct: 1371 aactaagaatacta 1384 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 322 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 381 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 382 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 441 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 442 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 501 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 502 gaacggggctaagcgatctgccgaagctgtgggatgt 538 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcggtaggggagcgttccg 566 ||||||||||||||||||||| Sbjct: 1672 catcggtaggggagcgttccg 1692
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 214 bits (108), Expect = 2e-52 Identities = 219/254 (86%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 301 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 420 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 477 Query: 203 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 478 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 537 Query: 260 caaactctgaatac 273 |||||||||||||| Sbjct: 538 caaactctgaatac 551
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 182 bits (92), Expect = 8e-43 Identities = 150/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 360 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 269 aatac 273 ||||| Sbjct: 547 aatac 551
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 228 bits (115), Expect = 2e-56 Identities = 222/254 (87%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactg 200 ||||||| ||||||||||||||||||||||||| ||| ||||||||| || ||| | Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt- 478 Query: 201 gacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | |||| | |||||||||||||||||||||||||||| | || ||||||||||||||| Sbjct: 479 -atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgaga 537 Query: 260 caaactctgaatac 273 |||||||||||||| Sbjct: 538 caaactctgaatac 551 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 532 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 204 bits (103), Expect = 2e-49 Identities = 205/236 (86%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| ||| Sbjct: 2051169 acccgaacctgggtgatctaaccatgg-ccaggctgaagcttgggtaaagccaagtggag 2051111 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 2051110 ggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 2051051 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg- 201 |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 2051050 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggt 2050992 Query: 202 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 257 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050991 acctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 204 bits (103), Expect = 2e-49 Identities = 205/236 (86%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| ||| Sbjct: 1450332 acccgaacctgggtgatctaaccatgg-ccaggctgaagcttgggtaaagccaagtggag 1450390 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1450391 ggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 1450450 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg- 201 |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 1450451 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggt 1450509 Query: 202 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 257 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450510 acctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 198 bits (100), Expect = 1e-47 Identities = 236/279 (84%), Gaps = 5/279 (1%) Strand = Plus / Plus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 |||| |||||||| ||| ||| ||||||||| |||||||||| ||||| |||||| |||| Sbjct: 137149 ggcgtttgtcacttcttatgg-acccgaacccgggtgatctaaccatg-accaggatgaa 137206 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| | |||| ||| || | |||||||||| ||||||||| |||| |||||||||| Sbjct: 137207 gcttgggtaaaaccaagtggaagaccgaaccgaccgatgttgaaaaatcggcggatgagt 137266 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||| ||||| | | |||||| | |||||||||||||||| ||||||| || Sbjct: 137267 tgtggttaggggagaaattctaatcgaactcggagctagctggttctcttcgaaatgtgt 137326 Query: 181 tgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctg 237 ||||||||||| ||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 137327 tgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctg 137386 Query: 238 cgcgagcggtaccaaatcgaggcaaactctgaatactag 276 | | |||||||||||| |||||||| ||||||||| Sbjct: 137387 ggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 198 bits (100), Expect = 1e-47 Identities = 236/279 (84%), Gaps = 5/279 (1%) Strand = Plus / Minus Query: 1 ggcgattgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaa 60 |||| |||||||| ||| ||| ||||||||| |||||||||| ||||| |||||| |||| Sbjct: 48395 ggcgtttgtcacttcttatgg-acccgaacccgggtgatctaaccatg-accaggatgaa 48338 Query: 61 gcttggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 120 |||||| | |||| ||| || | |||||||||| ||||||||| |||| |||||||||| Sbjct: 48337 gcttgggtaaaaccaagtggaagaccgaaccgaccgatgttgaaaaatcggcggatgagt 48278 Query: 121 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 180 |||||||||||| ||||| | | |||||| | |||||||||||||||| ||||||| || Sbjct: 48277 tgtggttaggggagaaattctaatcgaactcggagctagctggttctcttcgaaatgtgt 48218 Query: 181 tgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggctg 237 ||||||||||| ||| ||| || ||||||||||||||||||||||||||||||||| Sbjct: 48217 tgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggctg 48158 Query: 238 cgcgagcggtaccaaatcgaggcaaactctgaatactag 276 | | |||||||||||| |||||||| ||||||||| Sbjct: 48157 ggaaactggtaccaaatcgtagcaaactcagaatactag 48119
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 228 bits (115), Expect = 2e-56 Identities = 223/258 (86%), Gaps = 4/258 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | | | ||| ||| Sbjct: 683 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaacaacaagtggag 741 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| Sbjct: 742 gtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatacca 801 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt---tgact 199 |||||| | ||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 802 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatg 861 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 || |||||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 862 ggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtgg 921 Query: 260 caaactctgaatactaga 277 |||||| |||||||||| Sbjct: 922 caaactaagaatactaga 939 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagct 529 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 228 bits (115), Expect = 2e-56 Identities = 223/258 (86%), Gaps = 4/258 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | | | ||| ||| Sbjct: 2565 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaacaacaagtggag 2623 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| Sbjct: 2624 gtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatacca 2683 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt---tgact 199 |||||| | ||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2684 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatg 2743 Query: 200 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 || |||||||||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct: 2744 ggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtgg 2803 Query: 260 caaactctgaatactaga 277 |||||| |||||||||| Sbjct: 2804 caaactaagaatactaga 2821 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagct 529 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 226 bits (114), Expect = 6e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 453 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 513 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 114
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 490 tgcgctgaagatgaacggggctaag 514 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 206 bits (104), Expect = 6e-50 Identities = 153/169 (90%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 302 acccgaacccgggtgatctaaccatgt-ccaggatgaagcttgggtaaaaccaagtggag 360 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 361 gtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcca 420 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 421 atcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 269 aatac 273 ||||| Sbjct: 548 aatac 552
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 224 bits (113), Expect = 2e-55 Identities = 220/254 (86%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| |||| |||||||| | | | |||||| ||| Sbjct: 39746 acccgaacccggatgatctaaccatgg-ccagcgtgaagcttaggtaacactaagtggag 39688 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 39687 gtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 39628 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 39627 atcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctc 39568 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 || | |||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 39567 caacttaggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgca 39508 Query: 262 aactctgaatacta 275 |||||||||||||| Sbjct: 39507 aactctgaatacta 39494 Score = 224 bits (113), Expect = 2e-55 Identities = 220/254 (86%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| |||| |||||||| | | | |||||| ||| Sbjct: 19654 acccgaacccggatgatctaaccatgg-ccagcgtgaagcttaggtaacactaagtggag 19712 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 19713 gtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 19772 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 19773 atcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctc 19832 Query: 203 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 261 || | |||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 19833 caacttaggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgca 19892 Query: 262 aactctgaatacta 275 |||||||||||||| Sbjct: 19893 aactctgaatacta 19906 Score = 172 bits (87), Expect = 8e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 322 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 381 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 382 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 441 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 442 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 501 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 39289 Query: 502 gaacggggctaagcgatctgccgaagctgtgggat 536 || ||| ||||| || ||||||||||||||||| Sbjct: 39288 gactgggactaagtaatttgccgaagctgtgggat 39254 Score = 172 bits (87), Expect = 8e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 322 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 381 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 382 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 441 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 442 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 501 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 20111 Query: 502 gaacggggctaagcgatctgccgaagctgtgggat 536 || ||| ||||| || ||||||||||||||||| Sbjct: 20112 gactgggactaagtaatttgccgaagctgtgggat 20146
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 206 bits (104), Expect = 6e-50 Identities = 218/254 (85%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 2216 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaaccaagtggag 2274 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2275 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2334 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2335 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2392 Query: 203 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | || ||||||||||||||||||| |||||||| | || |||||||| ||||| Sbjct: 2393 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgagg 2452 Query: 260 caaactctgaatac 273 |||||||||||||| Sbjct: 2453 caaactctgaatac 2466
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 222 bits (112), Expect = 1e-54 Identities = 222/256 (86%), Gaps = 4/256 (1%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 27135 acccgaacccggatgatctagccatgg-ccagggtgaagcttaggtaacactaagtggag 27077 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| Sbjct: 27076 gtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatgcca 27017 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 200 ||||| || ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 27016 atcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatgcta 26957 Query: 201 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | | ||||||||||||||||||||||||||||||| || || ||||||||||||| || Sbjct: 26956 ta-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgatgc 26898 Query: 261 aaactctgaatactag 276 |||||||||||||||| Sbjct: 26897 aaactctgaatactag 26882 Score = 159 bits (80), Expect = 1e-35 Identities = 191/228 (83%) Strand = Plus / Minus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 ||||||||||||| | || |||||||||||| || | ||| | ||| |||||||| Sbjct: 26808 aaggcccctaaataattactaagtgataaaggaagtaagaatgcgtaaacaaccaggagg 26749 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 || || |||||||||| | |||||||||||||||||||||||||||| | || | ||| Sbjct: 26748 ttcgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtttagtgatctt 26689 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 538 |||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 26688 gcgccgaaaatgaacggggctaagtaatttgccgaagctgtgggatgt 26641
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 1e-54 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 220 bits (111), Expect = 4e-54 Identities = 221/254 (87%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactg 200 ||||||| ||||||||||||||||||||||||| ||| ||||||||| || ||| | Sbjct: 420 atcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt- 478 Query: 201 gacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | |||| | |||||||||||||||||||||||||||| | || ||||||||||||||| Sbjct: 479 -aaatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgaga 537 Query: 260 caaactctgaatac 273 ||||||| |||||| Sbjct: 538 caaactcagaatac 551
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Minus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 208 bits (105), Expect = 1e-50 Identities = 217/253 (85%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 3327699 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttaggtaacactaagtggag 3327757 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 3327758 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 3327817 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 3327818 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 3327877 Query: 203 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 3327878 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 3327937 Query: 261 aaactctgaatac 273 |||||| |||||| Sbjct: 3327938 aaactcagaatac 3327950 Score = 208 bits (105), Expect = 1e-50 Identities = 217/253 (85%), Gaps = 3/253 (1%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 2451029 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttaggtaacactaagtggag 2450971 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2450970 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2450911 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 2450910 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 2450851 Query: 203 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 2450850 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 2450791 Query: 261 aaactctgaatac 273 |||||| |||||| Sbjct: 2450790 aaactcagaatac 2450778
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 198 bits (100), Expect = 1e-47 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| ||| Sbjct: 2312983 acccgaacctgggtgatctaaccatgg-ccaggctgaagcttgggtaaagccaagtggag 2313041 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 2313042 ggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 2313101 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2313102 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 2313150 Score = 198 bits (100), Expect = 1e-47 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 |||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| ||| Sbjct: 1108864 acccgaacctgggtgatctaaccatgg-ccaggctgaagcttgggtaaagccaagtggag 1108806 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1108805 ggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 1108746 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108745 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 1108697
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 220 bits (111), Expect = 4e-54 Identities = 227/261 (86%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||||| |||||||||| | | || | | || Sbjct: 2720 acccgaacccgggtgatctaaccatg-accaggatgaagcttgggtaataccacgtgaag 2778 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 203 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 261 aaactctgaatactagatatg 281 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/170 (84%), Gaps = 5/170 (2%) Strand = Plus / Plus Query: 308 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 367 |||||||||||| ||||||||||||||||| || ||||||||||| ||| ||| || Sbjct: 2988 ggccagtgagacagtgggggataagcttcattgta-agagggaaaca-cccagat-ac-- 3042 Query: 368 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 427 |||||||||||||||||| | | |||| |||||||||| | ||| ||||| |||| Sbjct: 3043 gctaaggcccctaaatgattgttaagtggcaaaggaggtgagaatgctcagacaaccaga 3102 Query: 428 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 477 |||||||| |||||||||| | |||||||||||||||||| ||||||||| Sbjct: 3103 aggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcactg 3152
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 2e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 489 ttgcgctgaagatgaacggggctaag 514 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 190 bits (96), Expect = 3e-45 Identities = 151/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 301 acccgaaccccggtgatctaaccatgt-ccaggatgaagcttgggtaacaccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 420 atcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 269 aatactagat 278 ||||| |||| Sbjct: 547 aataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 149 bits (75), Expect = 1e-32 Identities = 142/164 (86%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| |||| |||||||||| | | || ||| ||| Sbjct: 2334136 acccgaacccgggtgatctaaccatgg-ccagaatgaagcttgggtaacaccaagtggag 2334078 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 || || |||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 2334077 gttcgcaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcca 2334018 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggc 186 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 2334017 atcgaacccggagctagctggttctccccgaaatatgttgaggc 2333974 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 269 aatac 273 ||||| Sbjct: 2333890 aatac 2333886
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 322 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 381 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 382 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 441 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 442 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 501 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 502 gaacggggctaagcgatctgccgaagctgtgggat 536 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 174 bits (88), Expect = 2e-40 Identities = 216/256 (84%), Gaps = 4/256 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||||| |||||||| ||||| ||||| |||| ||||| | | || || || Sbjct: 715 acccgaacctgagtgatctaaccatgg-ccaggatgaatcttgggtaacaccaaatggaa 773 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| ||| Sbjct: 774 gaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcca 833 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 200 |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| || Sbjct: 834 gtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatg 893 Query: 201 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 259 | | | ||||||||||||||||||||||||||||||||| |||||||| |||||| | Sbjct: 894 ggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcg 953 Query: 260 caaactctgaatacta 275 |||||| |||||||| Sbjct: 954 caaactaagaatacta 969
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 212 bits (107), Expect = 9e-52 Identities = 231/265 (87%), Gaps = 10/265 (3%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||| ||| ||| Sbjct: 801 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtaaaaccaagtggag 859 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 860 gtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcca 919 Query: 143 ctcgaacccagagctagctggttctccccg-aaatgcgttgaggcgcagcagt---tgac 198 |||||| | ||||||||| |||||||||| ||||||||||| ||||||| || |||| Sbjct: 920 atcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcgcagcggttgatgac 976 Query: 199 t--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 256 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 977 ttgggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 1036 Query: 257 aggcaaactctgaatactagatatg 281 ||||||| ||||||||| |||| Sbjct: 1037 tagcaaactaagaatactaggtatg 1061 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 423 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 482 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | || Sbjct: 1184 ccaggaggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtgga 1243 Query: 483 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 536 ||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1244 gcgttcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1297 Score = 129 bits (65), Expect = 1e-26 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggt 406 ||||||||||||||| ||||| |||| ||||||||| Sbjct: 1132 taaggcccctaaatggccgctaagtggcaaaggaggt 1168 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcggtaggggagcgttccg 566 |||||||||||||||||||| Sbjct: 1547 atcggtaggggagcgttccg 1566
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 210 bits (106), Expect = 4e-51 Identities = 217/253 (85%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 552 taggggagcgttc 564 ||||||||||||| Sbjct: 17854 taggggagcgttc 17842 Score = 210 bits (106), Expect = 4e-51 Identities = 217/253 (85%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 312 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 371 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 372 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 431 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 432 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 491 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 492 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 551 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 552 taggggagcgttc 564 ||||||||||||| Sbjct: 3012 taggggagcgttc 3024 Score = 159 bits (80), Expect = 1e-35 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| |||| |||||||| | | | |||||| ||| Sbjct: 18362 acccgaacccggatgatctaaccatgg-ccagtgtgaagcttaggtaacactaagtggag 18304 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 || ||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 18303 gtacgaaccgactgttgttgaaaaaacagcggatgagttgtggttaggggtgaaattcca 18244 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 18243 atcgaatccggagctagctggatctccccgaaatgcgttgaggcgcagc 18195 Score = 159 bits (80), Expect = 1e-35 Identities = 147/169 (86%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| |||| |||||||| | | | |||||| ||| Sbjct: 2504 acccgaacccggatgatctaaccatgg-ccagtgtgaagcttaggtaacactaagtggag 2562 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 || ||||||||||| ||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 2563 gtacgaaccgactgttgttgaaaaaacagcggatgagttgtggttaggggtgaaattcca 2622 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 2623 atcgaatccggagctagctggatctccccgaaatgcgttgaggcgcagc 2671 Score = 99.6 bits (50), Expect = 1e-17 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 207 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 265 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 266 ctgaatacta 275 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 1e-17 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 207 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 265 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 266 ctgaatacta 275 |||||||||| Sbjct: 2748 ctgaatacta 2757
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 210 bits (106), Expect = 4e-51 Identities = 216/253 (85%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| || ||||||| ||||| ||||| |||| ||| | | | |||||| ||| Sbjct: 2374 acccgaacccggatgatctagccatgg-ccaggatgaaacttaggtaacactaagtggag 2432 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| Sbjct: 2433 gtccgaaccgactgatgttgaaaaatcaacggatgagctgtggctagcggtgaaatacca 2492 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 ||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 2493 atcgaattcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgaaatta 2552 Query: 203 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 262 | ||||||||||||||||||||||||||||||||| || ||||||||||||| |||| Sbjct: 2553 aacttaggggtaaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaa 2612 Query: 263 actctgaatacta 275 ||| |||||||| Sbjct: 2613 actaagaatacta 2625 Score = 149 bits (75), Expect = 1e-32 Identities = 210/254 (82%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 491 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 550 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 551 gtaggggagcgttc 564 |||||||||||||| Sbjct: 2878 gtaggggagcgttc 2891
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 309 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 368 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 369 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 428 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 429 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 488 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 489 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 167 bits (84), Expect = 5e-38 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||||| ||| || ||| ||| Sbjct: 301 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttgggtgataccaagtggag 359 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgcca 419 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 |||||||| ||||||||||||||||| ||||||| |||||||| |||| Sbjct: 420 atcgaacccggagctagctggttctcctcgaaatgtgttgaggcacagc 468 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 269 aatac 273 ||||| Sbjct: 547 aatac 551
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 311 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 370 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 371 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 430 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 431 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 490 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 491 gcgctgaagatgaacggggctaagc 515 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 174 bits (88), Expect = 2e-40 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| ||||||||| ||||| ||||| |||||||||| | | || ||| ||| Sbjct: 299 acccgaaccctggtgatctaaccatgg-ccaggatgaagcttgggtaacaccaagtggag 357 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 358 gtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 417 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 191 ||||||| ||||||||||||||||||||||||| ||| |||| |||| Sbjct: 418 atcgaaccaggagctagctggttctccccgaaatgtgtttaggcacagc 466 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 209 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 268 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 269 aatac 273 ||||| Sbjct: 545 aatac 549
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 208 bits (105), Expect = 1e-50 Identities = 217/253 (85%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 23 acccgaacctgggtgatctatccatgnaccaggntgaagcttggntgaaactaagcagag 82 ||||||||| |||||||||| ||||| ||||| |||||||| | | | |||||| ||| Sbjct: 302 acccgaacccgggtgatctaaccatgg-ccaggatgaagcttaggtaacactaagtggag 360 Query: 83 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 142 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 361 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 420 Query: 143 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 202 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 421 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 480 Query: 203 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 260 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 481 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 540 Query: 261 aaactctgaatac 273 |||||| |||||| Sbjct: 541 aaactcagaatac 553 Score = 206 bits (104), Expect = 6e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 310 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 369 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 370 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 429 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 430 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 489 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 490 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 533 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 208 bits (105), Expect = 1e-50 Identities = 131/138 (94%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 5 attgtcactgcttntggnacccgaacctgggtgatctatccatgnaccaggntgaagctt 64 ||||||||||||| ||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 48 attgtcactgcttatgg-acccgaacctgggtgatctatccatg-accaggatgaagctt 105 Query: 65 ggntgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 124 || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 gggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtg 165 Query: 125 gttaggggtgaaatgcca 142 |||||||||||||||||| Sbjct: 166 gttaggggtgaaatgcca 183
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 208 bits (105), Expect = 1e-50 Identities = 105/105 (100%) Strand = Plus / Plus Query: 462 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 522 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 566 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 105 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,336,480 Number of Sequences: 3902068 Number of extensions: 3336480 Number of successful extensions: 63341 Number of sequences better than 10.0: 2655 Number of HSP's better than 10.0 without gapping: 2681 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 47276 Number of HSP's gapped (non-prelim): 14859 length of query: 566 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 543 effective length of database: 17,143,297,704 effective search space: 9308810653272 effective search space used: 9308810653272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)