ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16p11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X13366.1|CHSCPSBD Secale cereale chloroplast psbD, psbC and trnS genes for D2 polypeptide, Chl a-binding protein and tRNA-Ser(uga) Length = 2992 Score = 650 bits (328), Expect = 0.0 Identities = 378/395 (95%), Gaps = 2/395 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| |||||||||| |||||||||||| Sbjct: 2440 aggttgaaaaaagacatacaaccttggcaag-aacgacgctcagcag-aatatatgaccc 2497 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2498 acgctcctttaggctctttaaattccgtgggtggcgtagctaccgagatcaatgcagtta 2557 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 2558 attatgtctctcctagaagttggttatctacttctcattttgttctaggattcttccctt 2617 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2618 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 2677 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2678 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 2737 Query: 301 tttatacctgttctacnnnnnnnctgttctggctcggttattctatctagccgagccatt 360 |||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 2738 tttatacctgttctactttttttctgttctggctcggttattccatctagccgagccatt 2797 Query: 361 cattcctttttatgaaagaaagataagggacagaa 395 ||||||||||||||||||||||||||||||||||| Sbjct: 2798 cattcctttttatgaaagaaagataagggacagaa 2832
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 618 bits (312), Expect = e-174 Identities = 374/395 (94%), Gaps = 2/395 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| |||||||||| |||||||||||| Sbjct: 11138 aggttgaaaaaagacatacaaccttggcaag-aacgacgctcagcag-aatatatgaccc 11195 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11196 acgctcctttaggctctttaaattccgtgggtggcgtagctaccgagatcaatgcagtta 11255 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||||| Sbjct: 11256 attatgtttctcctagaagttggttagcgtcttcccattttgttctaggattcttctttt 11315 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 11316 ttgtgggccatttttggcatgcaggaagagcccgggctgctgcagcaggttttgaaaagg 11375 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11376 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 11435 Query: 301 tttatacctgttctacnnnnnnnctgttctggctcggttattctatctagccgagccatt 360 |||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 11436 tttatacctgttctactttttttctgttctggctcggttattccatctagccgagccatt 11495 Query: 361 cattcctttttatgaaagaaagataagggacagaa 395 ||||||||||||||||||||||||||||||||||| Sbjct: 11496 cattcctttttatgaaagaaagataagggacagaa 11530
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 11045 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 11102 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11103 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 11162 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 11163 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 11222 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 11223 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 11282 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 11283 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 11342 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11343 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 11402 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 11403 ttcattcctttctatgaaagaaagataaggg 11433
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 11045 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 11102 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11103 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 11162 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 11163 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 11222 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 11223 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 11282 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 11283 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 11342 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11343 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 11402 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 11403 ttcattcctttctatgaaagaaagataaggg 11433
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 10982 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 11039 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11040 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 11099 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 11100 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 11159 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 11160 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 11219 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 11220 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 11279 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11280 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 11339 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 11340 ttcattcctttctatgaaagaaagataaggg 11370
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 11043 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 11100 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11101 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 11160 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 11161 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 11220 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 11221 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 11280 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 11281 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 11340 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11341 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 11400 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 11401 ttcattcctttctatgaaagaaagataaggg 11431
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 94392 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 94449 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 94450 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 94509 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 94510 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 94569 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 94570 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 94629 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 94630 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 94689 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 94690 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 94749 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 94750 ttcattcctttctatgaaagaaagataaggg 94780
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 9240271 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 9240328 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9240329 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 9240388 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 9240389 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 9240448 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 9240449 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 9240508 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 9240509 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 9240568 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9240569 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 9240628 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 9240629 ttcattcctttctatgaaagaaagataaggg 9240659 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 9136366 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 9136423 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9136424 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 9136483 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 9136484 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 9136543 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 9136544 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 9136603 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 9136604 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 9136663 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9136664 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 9136723 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 9136724 ttcattcctttctatgaaagaaagataaggg 9136754 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 327 ttctggctcggttattctatctagccgagccattcattcctttttatgaaagaaagataa 386 ||||| |||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||| Sbjct: 5174640 ttctgactcgcttattctatctagctgagccattcattcctttctataaaataaagataa 5174581 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 280 ctcttaactaagattttcttatttatacctgttctac 316 ||||||||||||||| ||||||||||| |||||||| Sbjct: 5174692 ctcttaactaagattctcttatttatatgtgttctac 5174656
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Minus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 14385275 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 14385218 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 14385217 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 14385158 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 14385157 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 14385098 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 14385097 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 14385038 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 14385037 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 14384978 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 14384977 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 14384918 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 14384917 ttcattcctttctatgaaagaaagataaggg 14384887 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 151 cttctcattttgttctaggattcttcttttt 181 |||| |||||||||||||||||||| ||||| Sbjct: 17793841 cttcccattttgttctaggattctttttttt 17793811
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 33563060 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 33563117 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 33563118 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 33563177 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 33563178 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 33563237 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 33563238 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 33563297 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 33563298 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 33563357 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 33563358 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 33563417 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 33563418 ttcattcctttctatgaaagaaagataaggg 33563448
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 108257 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 108314 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 108315 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 108374 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 108375 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 108434 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 108435 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 108494 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 108495 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 108554 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 108555 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 108614 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 108615 ttcattcctttctatgaaagaaagataaggg 108645
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Minus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 107197 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 107140 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 107139 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 107080 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 107079 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 107020 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 107019 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 106960 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 106959 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 106900 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106899 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 106840 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 106839 ttcattcctttctatgaaagaaagataaggg 106809
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 541 bits (273), Expect = e-151 Identities = 362/391 (92%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 10980 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 11037 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 11038 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 11097 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 11098 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 11157 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 11158 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 11217 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 11218 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 11277 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11278 tttatacctgttctactgtttttttctgttctggctcggttattctatctagccgagcca 11337 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 11338 ttcattcctttctatgaaagaaagataaggg 11368
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 529 bits (267), Expect = e-147 Identities = 361/392 (92%), Gaps = 5/392 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | ||||||| |||||||||||| Sbjct: 142073 aggttgaaaaaagacatacaaccttggcaag-aacgacattcagcag-aatatatgaccc 142130 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 142131 atgctcctttaggctctttaaattctgtgggtggcgtaggtaccgagatcaatgcagtta 142190 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 142191 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 142250 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 142251 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 142310 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142311 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 142370 Query: 301 tttatacctgttctac---nnnnnnnctgttctggctcggttattctatctagccgagcc 357 |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 142371 tttatacctgttctactgttttttttctgttctggctcggttattctatctagccgagcc 142430 Query: 358 attcattcctttttatgaaagaaagataaggg 389 |||||||||||| ||||||||||||||||||| Sbjct: 142431 attcattcctttctatgaaagaaagataaggg 142462
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 529 bits (267), Expect = e-147 Identities = 361/392 (92%), Gaps = 5/392 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | ||||||| |||||||||||| Sbjct: 5160 aggttgaaaaaagacatacaaccttggcaag-aacgacattcagcag-aatatatgaccc 5217 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 5218 atgctcctttaggctctttaaattctgtgggtggcgtaggtaccgagatcaatgcagtta 5277 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 5278 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 5337 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 5338 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 5397 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 5398 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 5457 Query: 301 tttatacctgttctac---nnnnnnnctgttctggctcggttattctatctagccgagcc 357 |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5458 tttatacctgttctactgttttttttctgttctggctcggttattctatctagccgagcc 5517 Query: 358 attcattcctttttatgaaagaaagataaggg 389 |||||||||||| ||||||||||||||||||| Sbjct: 5518 attcattcctttctatgaaagaaagataaggg 5549
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 529 bits (267), Expect = e-147 Identities = 361/392 (92%), Gaps = 5/392 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | ||||||| |||||||||||| Sbjct: 12844614 aggttgaaaaaagacatacaaccttggcaag-aacgacattcagcag-aatatatgaccc 12844671 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 12844672 atgctcctttaggctctttaaattctgtgggtggcgtaggtaccgagatcaatgcagtta 12844731 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 12844732 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 12844791 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 12844792 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 12844851 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 12844852 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaagattttctta 12844911 Query: 301 tttatacctgttctac---nnnnnnnctgttctggctcggttattctatctagccgagcc 357 |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12844912 tttatacctgttctactgttttttttctgttctggctcggttattctatctagccgagcc 12844971 Query: 358 attcattcctttttatgaaagaaagataaggg 389 |||||||||||| ||||||||||||||||||| Sbjct: 12844972 attcattcctttctatgaaagaaagataaggg 12845003
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 527 bits (266), Expect = e-147 Identities = 356/385 (92%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||| ||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 11568 aggttgaaaaaagacatccaaccttggcaag-aacgacgttcagcag-aatatatgaccc 11625 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11626 atgctcctttaggctctttaaattccgtgggtggcgtagctaccgagatcaatgcagtta 11685 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || || ||||||||||||||||||||||||| Sbjct: 11686 attatgtctctcctagaagttggttagcgacctcccattttgttctaggattcttctttt 11745 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11746 ttgtgggccatttgtggcatgcaggaagagcccgagctgctgcagcaggctttgaaaagg 11805 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 11806 gaatcgatcgtgatttggaacctgttctttacatgacccctcttaactaagatttt-tta 11864 Query: 301 tttatacctgttctacnnnnnnnctgttctggctcggttattctatctagccgagccatt 360 ||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 11865 tttatacctgttctagtttttttctgttctggctcggttattccatctagccgagccatt 11924 Query: 361 cattcctttttatgaaagaaagata 385 ||| | |||||||||||||| |||| Sbjct: 11925 catgcttttttatgaaagaatgata 11949
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 519 bits (262), Expect = e-144 Identities = 355/385 (92%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||| ||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 73195 aggttgaaaaaagacatccaaccttggcaag-aacgacgttcagcag-aatatatgaccc 73252 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 73253 atgctcctttaggctctttaaattccgtgggtggcgtagctaccgagatcaatgcagtta 73312 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || || ||||||||||||||||||||||||| Sbjct: 73313 attatgtctctcctagaagttggttagcgacctcccattttgttctaggattcttctttt 73372 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 73373 ttgtgggccatttgtggcatgcaggaagagcccgagctgctgcagcaggctttgaaaagg 73432 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 73433 gaattgatcgtgatttggaacctgttctttacatgacccctcttaactaagatttt-tta 73491 Query: 301 tttatacctgttctacnnnnnnnctgttctggctcggttattctatctagccgagccatt 360 ||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 73492 tttatacctgttctagtttttttctgttctggctcggttattccatctagccgagccatt 73551 Query: 361 cattcctttttatgaaagaaagata 385 ||| | |||||||||||||| |||| Sbjct: 73552 catgcttttttatgaaagaatgata 73576
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 517 bits (261), Expect = e-144 Identities = 359/391 (91%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | || |||| |||||||||||| Sbjct: 9267 aggttgaaaaaagacatacaaccttggcaag-aacgacattcggcag-aatatatgaccc 9324 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 9325 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 9384 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 9385 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 9444 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 9445 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 9504 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| Sbjct: 9505 gaatcgatcgtgatttggagcctgttctttacatgaccccacttaactaagattttctta 9564 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 9565 tttatacctgttctactgtttttttctgttatggctcggttattctatctagccgagcca 9624 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 9625 ttcattcctttctatgaaagaaagataaggg 9655
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 517 bits (261), Expect = e-144 Identities = 359/391 (91%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | || |||| |||||||||||| Sbjct: 84200 aggttgaaaaaagacatacaaccttggcaag-aacgacattcggcag-aatatatgaccc 84257 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 84258 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 84317 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 84318 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 84377 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 84378 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 84437 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| Sbjct: 84438 gaatcgatcgtgatttggagcctgttctttacatgaccccacttaactaagattttctta 84497 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 84498 tttatacctgttctactgtttttttctgttatggctcggttattctatctagccgagcca 84557 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 84558 ttcattcctttctatgaaagaaagataaggg 84588
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 517 bits (261), Expect = e-144 Identities = 359/391 (91%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | || |||| |||||||||||| Sbjct: 10302875 aggttgaaaaaagacatacaaccttggcaag-aacgacattcggcag-aatatatgaccc 10302932 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 10302933 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 10302992 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 10302993 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 10303052 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 10303053 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 10303112 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| Sbjct: 10303113 gaatcgatcgtgatttggagcctgttctttacatgaccccacttaactaagattttctta 10303172 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 10303173 tttatacctgttctactgtttttttctgttatggctcggttattctatctagccgagcca 10303232 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 10303233 ttcattcctttctatgaaagaaagataaggg 10303263 Score = 137 bits (69), Expect = 3e-29 Identities = 115/127 (90%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||| ||||| |||| || || |||| |||||||||||| Sbjct: 21925498 aggttgaaaaaagacatacaaccttagcaag-aacgacgttcggcag-aatatatgaccc 21925441 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 21925440 atgctcctt-aggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 21925382 Query: 121 attatgt 127 ||||||| Sbjct: 21925381 attatgt 21925375
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 517 bits (261), Expect = e-144 Identities = 359/391 (91%), Gaps = 4/391 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | || |||| |||||||||||| Sbjct: 10308914 aggttgaaaaaagacatacaaccttggcaag-aacgacattcggcag-aatatatgaccc 10308971 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 10308972 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 10309031 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 10309032 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 10309091 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 10309092 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 10309151 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| Sbjct: 10309152 gaatcgatcgtgatttggagcctgttctttacatgaccccacttaactaagattttctta 10309211 Query: 301 tttatacctgttctac--nnnnnnnctgttctggctcggttattctatctagccgagcca 358 |||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 10309212 tttatacctgttctactgtttttttctgttatggctcggttattctatctagccgagcca 10309271 Query: 359 ttcattcctttttatgaaagaaagataaggg 389 ||||||||||| ||||||||||||||||||| Sbjct: 10309272 ttcattcctttctatgaaagaaagataaggg 10309302 Score = 137 bits (69), Expect = 3e-29 Identities = 115/127 (90%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||| ||||| |||| || || |||| |||||||||||| Sbjct: 21937161 aggttgaaaaaagacatacaaccttagcaag-aacgacgttcggcag-aatatatgaccc 21937104 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 21937103 atgctcctt-aggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 21937045 Query: 121 attatgt 127 ||||||| Sbjct: 21937044 attatgt 21937038
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 496 bits (250), Expect = e-137 Identities = 352/385 (91%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||| ||||||||||||| |||| || ||||||| |||||||||||| Sbjct: 11220 aggttgaaaaaagacatccaaccttggcaag-aacgacgttcagcag-aatatatgaccc 11277 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 11278 atgctcctttaggctctttaaattccgtgggtggcgtagctaccgagatcaatgctgtta 11337 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||| ||||||||||||||| | || || ||||||||||||||||||||||||| Sbjct: 11338 attatgtctcccctagaagttggttagcgacctcccattttgttctaggattcttctttt 11397 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11398 ttgtgggccatttgtggcatgcaggaagagcccgagctgctgcagcaggctttgaaaagg 11457 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagattttctta 300 |||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 11458 gaattgatcgcgatttggaacctgttctttacatgacccctcttaactaagatttt-tta 11516 Query: 301 tttatacctgttctacnnnnnnnctgttctggctcggttattctatctagccgagccatt 360 ||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 11517 tttatacctgttctagtttttttctgttctggctcggttattccatctagccgagccatt 11576 Query: 361 cattcctttttatgaaagaaagata 385 ||| | |||||||||||||| |||| Sbjct: 11577 catgcttttttatgaaagaatgata 11601
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 464 bits (234), Expect = e-127 Identities = 335/367 (91%), Gaps = 3/367 (0%) Strand = Plus / Plus Query: 19 caaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcctttaggctctt 78 ||||||||||||| |||| || |||| || ||||||||||||| |||||||||||||||| Sbjct: 11244 caaccttggcaag-aacgacgttcaggag-aatatatgacccatgctcctttaggctctt 11301 Query: 79 taaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgtctctcctagaa 138 |||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 11302 taaattccgtgggtggcgtagctaccgagatcaatgctgttaattatgtctcccctagaa 11361 Query: 139 gttggttatcaacttctcattttgttctaggattcttcttttttgtgggccatttatggc 198 |||||||| | || || |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 11362 gttggttagcgacctcccattttgttctaggattcttcttttttgtgggccatttgtggc 11421 Query: 199 atgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcgatcgtgatttgg 258 ||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| Sbjct: 11422 atgcaggaagagcccgagctgctgcagcaggctttgaaaagggaattgatcgcgatttgg 11481 Query: 259 aacctgttctttacatgaaccctcttaactaagattttcttatttatacctgttctacnn 318 |||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 11482 aacctgttgtttacatgacccctcttaactaagatttt-ttatttatacctgttctagtt 11540 Query: 319 nnnnnctgttctggctcggttattctatctagccgagccattcattcctttttatgaaag 378 |||||||||||||||||||| ||||||||||||||||||| | |||||||||||| Sbjct: 11541 tttttctgttctggctcggttattccatctagccgagccattcatgcttttttatgaaag 11600 Query: 379 aaagata 385 || |||| Sbjct: 11601 aatgata 11607
>ref|XM_465411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 412 bits (208), Expect = e-112 Identities = 271/290 (93%), Gaps = 2/290 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||||| Sbjct: 1135 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgaccc 1192 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 1193 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 1252 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 1253 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 1312 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1313 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 1372 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaa 290 ||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 1373 gaatcgatcgtgatttggagcctgttctttacatgacccctcttaactaa 1422
>ref|NM_195972.1| Oryza sativa (japonica cultivar-group) putative PSII 43kDa protein from chromosome 10 chloroplast insertion (OSJNBb0075K12.22), mRNA Length = 1422 Score = 396 bits (200), Expect = e-107 Identities = 269/290 (92%), Gaps = 2/290 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| | || |||| |||||||||||| Sbjct: 1135 aggttgaaaaaagacatacaaccttggcaag-aacgacattcggcag-aatatatgaccc 1192 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 1193 atgctcctttaggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 1252 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||| Sbjct: 1253 attatgtttctcctagaagttggttagcgacttcccattttgttctaggattcttctttt 1312 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1313 ttgtgggccatttgtggcatgcaggaagagcccgggctgctgcagcaggatttgaaaagg 1372 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaa 290 ||||||||||||||||||| |||||||||||||||| ||| ||||||||| Sbjct: 1373 gaatcgatcgtgatttggagcctgttctttacatgaccccacttaactaa 1422
>gb|DQ069647.1| Typha latifolia photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 327 bits (165), Expect = 2e-86 Identities = 253/280 (90%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 1142 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 1199 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1200 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagttaattatgt 1259 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | || |||||||||||||||||||||||| | |||||||| Sbjct: 1260 ctctcctagaagttggttagcgacctctcattttgttctaggattcttcctatttgtggg 1319 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| |||||||| ||||| ||||| || |||||||| || |||||||| |||||||| Sbjct: 1320 tcatttgtggcatgcgggaagggcccgtgcagctgcagcggggtttgaaaaaggaatcga 1379 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaac 287 ||| ||||||||||||||||||| ||||| |||||||||| Sbjct: 1380 tcgcgatttggaacctgttctttccatgacccctcttaac 1419
>gb|DQ069643.1| Acorus americanus photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1383 Score = 327 bits (165), Expect = 2e-86 Identities = 252/279 (90%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 1106 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 1163 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1164 tttagggtctttaaattccgtgggtggtgtagctaccgagatcaatgcagtcaattatgt 1223 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1224 ctctcctagaagttggttagctacttctcattttgttctaggattcttcttttttgtggg 1283 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| |||||||||||||| || || |||||||| |||||||| |||||||| Sbjct: 1284 tcatttgtggcacgcaggaagagcccgcgcagcggcagcaggatttgaaaaaggaatcga 1343 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 1344 tcgtgatttagaacctgttctttccatgactcctcttaa 1382
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 327 bits (165), Expect = 2e-86 Identities = 252/279 (90%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 35469 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 35526 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 35527 tttagggtctttaaattccgtgggtggtgtagctaccgagatcaatgcagtcaattatgt 35586 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 35587 ctctcctagaagttggttagctacttctcattttgttctaggattcttcttttttgtggg 35646 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| |||||||||||||| || || |||||||| |||||||| |||||||| Sbjct: 35647 tcatttgtggcacgcaggaagagcccgcgcagcggcagcaggatttgaaaaaggaatcga 35706 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 35707 tcgtgatttagaacctgttctttccatgactcctcttaa 35745
>gb|AY363057.1|AY363056S2 Spiranthes romanzoffiana PsbC (psbC) gene, partial cds; and psbC-trnS intergenic spacer, partial sequence; chloroplast Length = 642 Score = 325 bits (164), Expect = 6e-86 Identities = 267/299 (89%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| ||||| |||| ||||||||||||| ||||| Sbjct: 231 aaaaagacatacaaccttggcaag-aacgacgctcggcag-aatatatgacccatgctcc 288 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 289 tttaggctctttaaattctgtggggggcgtagctaccgagatcaatgcagttaattatgt 348 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | || |||||||||||| ||||||| ||||| |||||||| Sbjct: 349 ctctcctagaagttggttagctacctctcattttgttttaggatttttcttatttgtggg 408 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| |||||||| ||||| || || || |||||||| || |||||||| ||||| || Sbjct: 409 acatttgtggcatgcgggaagggcacgcgcagctgcagcgggatttgaaaaaggaattga 468 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaactaagattttcttatttata 306 ||||||||||||||||||||||| ||||| |||||||| || ||||||| || |||||| Sbjct: 469 tcgtgatttggaacctgttctttccatgacccctcttagctgagattttattctttata 527
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 325 bits (164), Expect = 6e-86 Identities = 252/279 (90%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| ||||||||||||| ||||| Sbjct: 34607 aaaaagacatacaaccttggcaag-aacgtcgttccgcag-aatatatgacccatgctcc 34664 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 34665 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 34724 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||||| || || || Sbjct: 34725 ctctcctagaagttggttagctacttctcattttgttctaggattcttcttcttcgtagg 34784 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||| || Sbjct: 34785 gcatttgtggcacgcaggaagagctcgtgcagctgcagcaggatttgaaaaaggaattga 34844 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 34845 tcgtgattttgaacctgttctttccatgacccctcttaa 34883
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 325 bits (164), Expect = 6e-86 Identities = 252/279 (90%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| ||||||||||||| ||||| Sbjct: 34606 aaaaagacatacaaccttggcaag-aacgtcgttccgcag-aatatatgacccatgctcc 34663 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 34664 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 34723 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||||| || || || Sbjct: 34724 ctctcctagaagttggttagctacttctcattttgttctaggattcttcttcttcgtagg 34783 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||| || Sbjct: 34784 gcatttgtggcacgcaggaagagctcgtgcagctgcagcaggatttgaaaaaggaattga 34843 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 34844 tcgtgattttgaacctgttctttccatgacccctcttaa 34882
>gb|DQ069648.1| Yucca schidigera photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 315 bits (159), Expect = 6e-83 Identities = 250/278 (89%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 1142 aaaaagatatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 1199 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||||||| Sbjct: 1200 tttaggttctttaaattcggtaggtggcgtagctaccgagatcaatgcagtcaattatgt 1259 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||| | |||||||| Sbjct: 1260 ctctcctagaagttggttagccacttctcattttgttctaggattcttcctatttgtggg 1319 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| |||||||||||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 1320 tcatttgtggcatgcaggaagagcccgtgcagctgctgcaggatttgaaaaaggaatcga 1379 Query: 248 tcgtgatttggaacctgttctttacatgaaccctctta 285 ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 1380 tcgtgatttggaacccgttctttccatgacccctctta 1417
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 311 bits (157), Expect = 1e-81 Identities = 255/286 (89%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || || | |||||||||| | Sbjct: 38502 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactc 38559 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| | Sbjct: 38560 atgctcctttaggttctttaaattccgtgggtggtgtagctacagagatcaatgcagtca 38619 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct: 38620 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttctttt 38679 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 ||||||| ||||| |||||||| ||||| ||||| || |||||||||||||||||||| | Sbjct: 38680 ttgtgggtcatttgtggcatgcgggaagggcccgtgcagctgcagcaggttttgaaaaag 38739 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 | |||||||| ||||| ||||||||||||| ||||| |||||||| Sbjct: 38740 ggatcgatcgcgattttgaacctgttcttttcatgactcctcttaa 38785
>gb|AY450953.1| Panax ginseng photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, complete cds; chloroplast Length = 2431 Score = 309 bits (156), Expect = 4e-81 Identities = 250/279 (89%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 2151 aaaaagacatacaaccttggcaag-aacggcgttctgcag-aatatatgacccatgctcc 2208 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 2209 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 2268 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||||| || || || Sbjct: 2269 ctctcctagaagttggttagctacttctcattttgttctaggattcttcttgttcgtagg 2328 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 2329 tcatttgtggcacgcgggaagggctcgtgcagctgcagcagggtttgaaaaaggaattga 2388 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 2389 tcgtgattttgaacctgttctttccatgacccctcttaa 2427
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 309 bits (156), Expect = 4e-81 Identities = 250/279 (89%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 37025 aaaaagacatacaaccttggcaag-aacggcgttctgcag-aatatatgacccatgctcc 37082 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct: 37083 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 37142 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||||| || || || Sbjct: 37143 ctctcctagaagttggttagctacttctcattttgttctaggattcttcttgttcgtagg 37202 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 37203 tcatttgtggcacgcgggaagggctcgtgcagctgcagcagggtttgaaaaaggaattga 37262 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 37263 tcgtgattttgaacctgttctttccatgacccctcttaa 37301
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 307 bits (155), Expect = 1e-80 Identities = 256/288 (88%), Gaps = 2/288 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || || | |||||||||| | Sbjct: 36162 aggttgaaaaaagacatacaaccttggcaag-aacgacgttccgc-ggaatatatgactc 36219 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 36220 atgctcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcggtca 36279 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||| | | Sbjct: 36280 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcctat 36339 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | ||||||||||| |||||||| ||||| || || || |||||||| || |||||||| | Sbjct: 36340 tcgtgggccatttgtggcatgcgggaagggctcgtgcggctgcagccggatttgaaaaag 36399 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 |||||||||||||||| ||||||||||||| ||||| ||||||||||| Sbjct: 36400 gaatcgatcgtgattttgaacctgttctttccatgacccctcttaact 36447
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 301 bits (152), Expect = 9e-79 Identities = 249/279 (89%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 34646 aaaaagacatacaaccttggcaag-aacgtcgttccgcag-aatatatgactcatgctcc 34703 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct: 34704 tttaggttctttaaattccgtgggtggagtagctaccgagatcaatgcagtcaattatgt 34763 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||||||||||||||| | ||||||||||||||||||||||||||||| || || || Sbjct: 34764 gtctcctagaagttggttagctacttctcattttgttctaggattcttcttcttcgtagg 34823 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| ||||||||||| || || ||||||||||| |||||||| ||||| || Sbjct: 34824 acatttgtggcacgcaggaagagctcgtgcagctgcagcaggatttgaaaaaggaattga 34883 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| ||||||||| Sbjct: 34884 tcgtgattttgaacctgttctttccatgacccctcttaa 34922
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 299 bits (151), Expect = 4e-78 Identities = 250/281 (88%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || || | |||||||||| |||||||| Sbjct: 38254 aaaaagacatacaaccttggcaag-aacggcgttccgc-ggaatatatgactcacgctcc 38311 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 38312 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 38371 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||| | || || || Sbjct: 38372 ctctcctagaagttggttagctacttctcattttgttctaggattcttcctattcgtagg 38431 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 38432 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 38491 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaact 288 ||||||||| ||||||||||||| |||| ||||||||||| Sbjct: 38492 tcgtgattttgaacctgttctttctatgacccctcttaact 38532
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 299 bits (151), Expect = 4e-78 Identities = 168/176 (95%) Strand = Plus / Plus Query: 220 ctgcagcaggttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaacc 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgcagcaggttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaacc 60 Query: 280 ctcttaactaagattttcttatttatacctgttctacnnnnnnnctgttctggctcggtt 339 ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 61 ctcttaactaagattttcttatttatacctgttctactttttttctgttctggctcggtt 120 Query: 340 attctatctagccgagccattcattcctttttatgaaagaaagataagggacagaa 395 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 attccatctagccgagccattcattcctttttatgaaagaaagataagggacagaa 176
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 299 bits (151), Expect = 4e-78 Identities = 248/278 (89%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 36577 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 36634 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 ||| || |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 36635 tttgggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 36694 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | || |||||||||||||||||||| ||| | |||||||| Sbjct: 36695 ctctcctagaagttggttagctacctctcattttgttctaggatttttcctatttgtggg 36754 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| |||||||| ||||| || || || |||||||| || |||||||| |||||||| Sbjct: 36755 acatttgtggcatgcgggaagggcacgtgcagctgcagcggggtttgaaaaaggaatcga 36814 Query: 248 tcgtgatttggaacctgttctttacatgaaccctctta 285 ||||||||||||||||||||||| ||||| |||||||| Sbjct: 36815 tcgtgatttggaacctgttctttccatgacccctctta 36852
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 297 bits (150), Expect = 1e-77 Identities = 253/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || || | |||||||||| | Sbjct: 35870 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgc-ggaatatatgactc 35927 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 35928 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 35987 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 35988 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 36047 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 |||| || ||||| ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 36048 ttgtaggtcatttgtggcacgcaggaagggctcgtgcagctgcagcaggatttgaaaaag 36107 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 36108 gaattgatcgtgactttgaacctgttcttttcatgacccctcttaa 36153
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 297 bits (150), Expect = 1e-77 Identities = 253/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || || | |||||||||| | Sbjct: 35753 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgc-ggaatatatgactc 35810 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 35811 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 35870 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 35871 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 35930 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 |||| || ||||| ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 35931 ttgtaggtcatttgtggcacgcaggaagggctcgtgcagctgcagcaggatttgaaaaag 35990 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 35991 gaattgatcgtgactttgaacctgttctttccatgacccctcttaa 36036
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 297 bits (150), Expect = 1e-77 Identities = 253/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || || | |||||||||| | Sbjct: 35874 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgc-ggaatatatgactc 35931 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 35932 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 35991 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 35992 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 36051 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 |||| || ||||| ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 36052 ttgtaggtcatttgtggcacgcaggaagggctcgtgcagctgcagcaggatttgaaaaag 36111 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 36112 gaattgatcgtgactttgaacctgttcttttcatgacccctcttaa 36157
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 289 bits (146), Expect = 4e-75 Identities = 252/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || || | |||||||||| | Sbjct: 35728 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgc-ggaatatatgactc 35785 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 35786 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 35845 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 35846 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 35905 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 |||| || ||||| ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 35906 ttgtaggtcatttgtggcacgcaggaagggctcgtgcagctgcagcaggatttgaaaaag 35965 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||| || || ||||||||||||| ||||| ||||||||| Sbjct: 35966 gaattgatcgcgactttgaacctgttctttccatgacccctcttaa 36011
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 289 bits (146), Expect = 4e-75 Identities = 252/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || || | |||||||||| | Sbjct: 35725 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgc-ggaatatatgactc 35782 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 35783 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 35842 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 35843 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 35902 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 |||| || ||||| ||||| |||||||| || || || ||||||||||| |||||||| | Sbjct: 35903 ttgtaggtcatttgtggcacgcaggaagggctcgtgcagctgcagcaggatttgaaaaag 35962 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||| || || ||||||||||||| ||||| ||||||||| Sbjct: 35963 gaattgatcgcgactttgaacctgttctttccatgacccctcttaa 36008
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 287 bits (145), Expect = 1e-74 Identities = 252/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || |||| |||||||||| | Sbjct: 36618 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgcag-aatatatgactc 36675 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 36676 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 36735 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 36736 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 36795 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 36796 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 36855 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 36856 gaattgatcgtgactttgaacctgttctttccatgacccctcttaa 36901
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 287 bits (145), Expect = 1e-74 Identities = 252/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || |||| |||||||||| | Sbjct: 36615 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgcag-aatatatgactc 36672 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 36673 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 36732 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 36733 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 36792 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 36793 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 36852 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 36853 gaattgatcgtgactttgaacctgttctttccatgacccctcttaa 36898
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 287 bits (145), Expect = 1e-74 Identities = 252/286 (88%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || |||| |||||||||| | Sbjct: 36552 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgcag-aatatatgactc 36609 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 36610 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 36669 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||||||||||||| | Sbjct: 36670 attatgtctctcctagaagttggttagctacctctcattttgttctaggattcttcttct 36729 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 36730 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 36789 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 36790 gaattgatcgtgactttgaacctgttctttccatgacccctcttaa 36835
>gb|AY741479.1| Camellia sinensis cultivar Taiwan Sun Cha photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741478.1| Camellia sinensis var. assamica cultivar Shan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741477.1| Camellia sinensis var. assamica cultivar TTES No. 18 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741476.1| Camellia sinensis var. assamica cultivar Burma photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741475.1| Camellia sinensis cultivar Shiang Yuan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741474.1| Camellia sinensis var. sinensis cultivar Shy Jin Chuen photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741473.1| Camellia sinensis cultivar Gau Lu photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741472.1| Camellia sinensis var. sinensis cultivar TTES No. 13 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741471.1| Camellia sinensis var. sinensis cultivar Chin Shin Dah Pan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741470.1| Camellia sinensis var. sinensis cultivar Chin Shin Oolong photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741469.1| Camellia sinensis var. sinensis cultivar Bair Mau Hour photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741468.1| Camellia sinensis var. sinensis cultivar Tiee Guan In photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741467.1| Camellia sinensis var. sinensis cultivar TTES No. 12 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741466.1| Camellia tenuifolia cultivar Don San photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>gb|AY741465.1| Camellia furfuracea cultivar Chyh Ya Sun Cha photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 285 bits (144), Expect = 5e-74 Identities = 247/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 1021 aaaaagatatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 1078 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct: 1079 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaattatgt 1138 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| || |||||||||||||||| ||||||||| || || || Sbjct: 1139 ctctcctagaagttggttatctacctctcattttgttctagcattcttcttattcgtagg 1198 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 1199 tcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 1258 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||| |||| Sbjct: 1259 tcgtgattttgaacctgttctttccatgaccccttttaa 1297
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 278 bits (140), Expect = 1e-71 Identities = 246/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 33657 aaaaagatatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 33714 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct: 33715 tttaggttctttaaattctgtgggtggggtggctaccgagatcaatgcagtcaattatgt 33774 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| ||||||||||||||||||||||||||| | || || || Sbjct: 33775 ctctcctagaagttggttatctacttctcattttgttctaggattcttcctattcgtagg 33834 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 33835 gcatttgtggcatgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 33894 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| |||| ||||||||| Sbjct: 33895 tcgtgattttgaacctgttctttcgatgacccctcttaa 33933
>gb|AY701779.1| Ipomopsis aggregata PsbC gene, partial cds; and psbC-trnS intergenic spacer, partial sequence; chloroplast Length = 485 Score = 278 bits (140), Expect = 1e-71 Identities = 251/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| ||||||| || |||| |||||||||||| Sbjct: 147 aggttgaaaaaagacatacaaccttggcaag-aacggcgttctgcag-aatatatgaccc 204 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 205 atgctcctttaggttctttaaattccgtaggtggtgtagctaccgagatcaatgcagtta 264 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| || ||||| | Sbjct: 265 attatgtctctcctagaagttggttagctacctctcattttgttctagcctttttcttat 324 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 325 tcgtaggacatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 384 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 385 gaattgatcgtgattttgaacctgttctttccatgactcctcttaa 430
>gb|M36833.1|SPICPCHLA Spinach chloroplast 44 kD chlorophyII alpha apoprotein and 32 kD-like polypeptide associated with the photosystem II reaction with the photosystem II reaction center genes, complete cds Length = 2914 Score = 278 bits (140), Expect = 1e-71 Identities = 246/279 (88%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2368 aaaaagatatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2425 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct: 2426 tttaggttctttaaattctgtgggtggggtggctaccgagatcaatgcagtcaattatgt 2485 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||||| ||||||||||||||||||||||||||| | || || || Sbjct: 2486 ctctcctagaagttggttatctacttctcattttgttctaggattcttcctattcgtagg 2545 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| |||||||| ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 2546 gcatttgtggcatgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 2605 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| |||| ||||||||| Sbjct: 2606 tcgtgattttgaacctgttctttcgatgacccctcttaa 2644
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 274 bits (138), Expect = 2e-70 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||| | ||||||| || || | |||||||||| | Sbjct: 36368 aggttgaaaaaagacatacaaccttggca-ggaacggcgttccgc-ggaatatatgactc 36425 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 36426 atgctcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 36485 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||| ||||||||||||| | Sbjct: 36486 attatgtctctcctagaagttggttagctacctctcattttgttttaggattcttcttct 36545 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 36546 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 36605 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| |||||||| || ||||||||||||| ||||| ||||||||| Sbjct: 36606 gaattgatcgtgactttgaacctgttctttccatgacccctcttaa 36651
>dbj|AB112635.1| Humulus japonicus chloroplast DNA, downstream region of trnS, Japanese wild, Length = 577 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 470 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 413 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 412 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 353 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 352 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 293 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 292 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 233 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 232 tcgtgatttagaacctgttcttttcatgactcctcttaa 194
>dbj|AB112634.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA3 Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112633.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA1 Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112632.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA2 Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112631.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA4 Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112630.1| Humulus lupulus chloroplast DNA, downstream region of trnS, Japanese wild Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112629.1| Humulus lupulus chloroplast DNA, downstream region of trnS, Chinese wild, haplotype:SC Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112628.1| Humulus lupulus chloroplast DNA, downstream region of trnS, Chinese wild, haplotype:NC Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagctacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112627.1| Humulus lupulus chloroplast DNA, downstream region of trnS, European wild, haplotype:EP Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagcgacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>dbj|AB112626.1| Humulus lupulus chloroplast DNA, downstream region of trnS, European wild, haplotype:E Length = 578 Score = 272 bits (137), Expect = 8e-70 Identities = 245/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 471 aaaaagacatacagccttggcaag-aacggcgttctgc-ggaatatatgactcatgctcc 414 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 413 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 354 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| |||||||||||| | |||||||||||||||||||| |||||| | || || || Sbjct: 353 ctctccgagaagttggttagcgacttctcattttgttctagggttcttcctattcgtagg 294 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || |||||||| || |||||||||||||| || Sbjct: 293 tcatttatggcacgcgggaagggctcgtgcagctgcagcgggatttgaaaagggaattga 234 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 233 tcgtgatttagaacctgttctttccatgactcctcttaa 195
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 270 bits (136), Expect = 3e-69 Identities = 255/293 (87%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| ||||||| || || | |||||||||| | Sbjct: 36740 aggttgaaaaaagacatacaaccttggcaag-aacggcgttctgc-ggaatatatgacgc 36797 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct: 36798 atgctcctttagggtctttaaattctgtaggtggcgtagctaccgagatcaatgcagtta 36857 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||||||||| |||||||||||| | || |||||||||||||||||||||||| | | Sbjct: 36858 attatgtctctccgagaagttggttagctacctctcattttgttctaggattcttcctat 36917 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | ||||| ||||||||||| || |||||||| || || || ||||| || |||||||| | Sbjct: 36918 tcgtgggtcatttatggcacgcgggaagagctcgcgcagccgcagcgggatttgaaaaag 36977 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagat 293 |||| ||||||||||| || |||||||| | ||||| |||||||||| |||| Sbjct: 36978 gaattgatcgtgattttgagcctgttctctccatgactcctcttaactgagat 37030
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 270 bits (136), Expect = 3e-69 Identities = 214/240 (89%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| ||||||||||||||||| |||||||| || |||| Sbjct: 40017 aatatatgactcatgctcctttaggttctttaaattccgtgggcggcgtagctacagaga 40076 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 |||||||||| |||||||||||||| |||||||||||| | || |||||||||||||||| Sbjct: 40077 tcaatgcagtcaattatgtctctcccagaagttggttagctacctctcattttgttctag 40136 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||| ||| | || ||||| ||||| |||||||||||||| ||||| || |||||||||| Sbjct: 40137 gatttttcctattcgtgggtcatttgtggcatgcaggaagggcccgtgcagctgcagcag 40196 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 | |||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 40197 gatttgaaaaaggaatcgatcgtgattttgaacctgttctttccatgactcctcttaact 40256
>dbj|AB206619.1| Pieris floribunda chloroplast DNA, psbC-trnS intergenic spacer Length = 736 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206618.1| Pieris phillyreifolia chloroplast DNA, psbC-trnS intergenic spacer Length = 736 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206617.1| Pieris formosa chloroplast DNA, psbC-trnS intergenic spacer Length = 736 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtga 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206615.1| Pieris taiwanensis chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206614.1| Pieris koidzumiana chloroplast DNA, psbC-trnS intergenic spacer, country:Japan:Okinawa, Okinawa Island Length = 731 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206613.1| Pieris koidzumiana chloroplast DNA, psbC-trnS intergenic spacer, country:Japan:Kagoshima, Amamioshima Island Length = 731 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206612.1| Pieris japonica var. yakushimensis chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206611.1| Pieris japonica chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>gb|AY701780.1| Ipomopsis tenuituba PsbC gene, partial cds; and psbC-trnS intergenic spacer, partial sequence; chloroplast Length = 485 Score = 270 bits (136), Expect = 3e-69 Identities = 250/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| ||||||| || |||| |||||||||||| Sbjct: 147 aggttgaaaaaagacatacaaccttggcaag-aacggcgttctgcag-aatatatgaccc 204 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 205 atgctcctttaggttctttaaattccgtaggtggtgtagctaccgagatcaatgcagtta 264 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||| |||||||||||||||||| | || |||||||||||||||| || ||||| | Sbjct: 265 attatgtttctcctagaagttggttagctacctctcattttgttctagcctttttcttat 324 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 325 tcgtaggacatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 384 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| ||||||||||||| ||||| |||||||| Sbjct: 385 gaattgatcgtgattttgaacctgttctttccatgactcctcttaa 430
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 268 bits (135), Expect = 1e-68 Identities = 246/281 (87%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||| ||||||||||||| |||| || || || | ||||||||||||| ||||| Sbjct: 36951 aaaaagacatccaaccttggcaag-aacgacgttccgc-ggaatatatgacccatgctcc 37008 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||||||||| |||||||| ||||| || |||||||| |||||||| Sbjct: 37009 tttaggttctttaaattccgtggggggcgtagctaccgaaattaatgcagtcaattatgt 37068 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | || |||||||||||||||||||||||||| || || || Sbjct: 37069 ctctcctagaagttggttagctacctctcattttgttctaggattcttcttattcgtagg 37128 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 |||||||||||||||||||| || || || ||||| ||||| |||||||| ||||| || Sbjct: 37129 tcatttatggcatgcaggaagggctcgtgcagctgccgcaggatttgaaaaaggaattga 37188 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaact 288 ||||||||| ||||||||||| | ||||| |||||||||| Sbjct: 37189 tcgtgattttgaacctgttctgttcatgactcctcttaact 37229
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 266 bits (134), Expect = 5e-68 Identities = 246/281 (87%), Gaps = 2/281 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 30290 aaaaagacatacagccttggcaag-aacggcgttccgcag-aatatatgactcatgctcc 30233 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| || |||||||| || ||||||||||||||||| |||||||| Sbjct: 30232 tttaggttctttaaattcggttggtggcgttgctaccgagatcaatgcagtcaattatgt 30173 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | || |||||||||||||||||||||||| | || || || Sbjct: 30172 ctctcctagaagttggttagctacctctcattttgttctaggattcttcctattcgtagg 30113 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || ||||||||||| |||||||| ||||| || Sbjct: 30112 gcatttatggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaaggaattga 30053 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaact 288 ||||||||| ||||||| ||||| ||||| ||||||||||| Sbjct: 30052 tcgtgattttgaacctgctctttccatgacccctcttaact 30012
>dbj|AB206620.1| Arcterica nana chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 262 bits (132), Expect = 8e-67 Identities = 249/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||| | Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaaag 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>dbj|AB206616.1| Pieris formosa var. forrestii chloroplast DNA, psbC-trnS intergenic spacer Length = 754 Score = 262 bits (132), Expect = 8e-67 Identities = 249/286 (87%), Gaps = 2/286 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||| | ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 203 aggttgaaaaacgacatacaaccttggcaag-aacgacgttccgcag-aatatatgactc 260 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 261 atgcgcctttaggttctttaaattccgtgggtggtgtagctaccgagatcaatgcagtca 320 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||||||||||||||||||||||||| | || |||||||||||||||| ||||||||| | Sbjct: 321 attatgtctctcctagaagttggttagctacctctcattttgttctagcattcttcttat 380 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || || ||||| ||||| || ||||| || || || ||||||||||| |||||||||| Sbjct: 381 tcgtaggtcatttgtggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagg 440 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 |||| ||||||||||| || || ||||||| ||||| ||||||||| Sbjct: 441 gaattgatcgtgattttgagcccgttctttccatgacccctcttaa 486
>gb|AF134324.1|AF134324 Populus deltoides Qa-binding protein PsbD (psbD) and chlorophyll a-binding protein PsbC (psbC) genes, chloroplast genes encoding chloroplast proteins, complete cds Length = 2545 Score = 262 bits (132), Expect = 8e-67 Identities = 254/293 (86%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || || | |||||||||||| Sbjct: 2215 aggttgaaaaaagacatacaaccttggcaag-aacgacgttctgc-ggaatatatgaccc 2272 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || |||||||| || ||||||||||| ||||||||||| ||||| ||||||||||| | Sbjct: 2273 atgcgcctttaggttcattaaattccgtaggtggcgtagctaccgaaatcaatgcagtca 2332 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 | |||||||||||||||||||||||| | || |||||||||||||| ||||||||| | | Sbjct: 2333 actatgtctctcctagaagttggttagctacctctcattttgttctcggattcttcctat 2392 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | || |||||||||||||| || ||||| || || || |||||||| || |||||||| | Sbjct: 2393 tcgtaggccatttatggcacgcgggaagggctcgtgcagctgcagctggatttgaaaaag 2452 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaagat 293 |||||||||| || |||||||||||||||||||||| |||||||||| |||| Sbjct: 2453 gaatcgatcgagacttggaacctgttctttacatgactcctcttaactgagat 2505
>gb|DQ069646.1| Ranunculus macranthus photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 258 bits (130), Expect = 1e-65 Identities = 244/280 (87%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 1142 aaaaagatatacaaccttggcaag-aacgtcgttccgc-ggaatatatgactcatgctcc 1199 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1200 tttaggttctttaaattccgtcggtggtgtagctaccgagatcaatgcagtcaattatgt 1259 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 || ||||||||||||||||| || |||||||||||||||||||||||| | || ||||| Sbjct: 1260 ttcgcctagaagttggttatccacctctcattttgttctaggattcttcctattcgtggg 1319 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 || || |||||||| ||||| ||||| || ||||| ||||| |||||||| ||||| || Sbjct: 1320 tcacttgtggcatgcgggaagggcccgtgcagctgccgcaggatttgaaaaaggaattga 1379 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaac 287 ||| ||||||||||||||||||| ||||| |||||||||| Sbjct: 1380 tcgggatttggaacctgttcttttcatgacccctcttaac 1419
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 254 bits (128), Expect = 2e-64 Identities = 251/290 (86%), Gaps = 2/290 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 34033 aggttgaaaaaagacatacaaccttggcaag-aacgacgttctgcag-aatatatgactc 34090 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| || |||||||| || || |||||||| || |||||||||||||| | Sbjct: 34091 atgctcctttaggttccttaaattctgtagggggcgtagctactgagatcaatgcagtca 34150 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 |||| |||||||| |||||||||||||| || |||||||||||||||||||||||| | | Sbjct: 34151 attacgtctctccgagaagttggttatctacctctcattttgttctaggattcttcctat 34210 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | ||||| ||||||||||| || |||||||| || || || |||||||| |||||||| | Sbjct: 34211 tcgtgggtcatttatggcacgcgggaagagctcgggcagcggcagcaggatttgaaaaag 34270 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaa 290 |||| ||||||||||| ||||||||||||| |||| |||||||||||| Sbjct: 34271 gaattgatcgtgattttgaacctgttctttctatgactcctcttaactaa 34320
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 254 bits (128), Expect = 2e-64 Identities = 243/279 (87%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||| |||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 38142 aaaaagatatacagccttggcaag-aacgtcgttccgcag-aatatatgactcatgctcc 38199 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct: 38200 tttaggttctttaaattctgtgggtggtgtcgctaccgagatcaatgcagtcaattatgt 38259 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | |||||||||||||||||||||||||| | || || || Sbjct: 38260 ctctcctagaagttggttagctacttctcattttgttctaggattctttctattcgtagg 38319 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || ||||| || || || ||||||||||| |||||||||||||| || Sbjct: 38320 tcatttatggcacgcgggaagggctcgtgcagctgcagcaggatttgaaaagggaattga 38379 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||||||||| ||||||||||||| ||||| ||| ||||| Sbjct: 38380 tcgtgattttgaacctgttctttccatgaccccccttaa 38418
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 248 bits (125), Expect = 1e-62 Identities = 242/279 (86%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 98225 aaaaagacatacagccttggcaag-aacgtcgttctgc-ggaatatatgactcatgctcc 98282 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| || ||||| |||||||| |||||||| Sbjct: 98283 tttaggttctttaaattccgtgggtggcgtagctacagagattaatgcagtcaattatgt 98342 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||| | || || || Sbjct: 98343 ctctcctagaagttggttagctacttctcattttgttctaggattcttcctattcgtagg 98402 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || |||||||| || || ||||| ||||| |||||||| ||||| || Sbjct: 98403 tcatttatggcacgcgggaagagctcgtgcagctgccgcaggatttgaaaaaggaattga 98462 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||| |||| ||| |||||||||| ||||| |||||||| Sbjct: 98463 tcgagattcggagcctgttcttttcatgactcctcttaa 98501
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 246 bits (124), Expect = 5e-62 Identities = 212/240 (88%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||| | Sbjct: 37008 aatatatgaccct-gctcctttaggttctttaaattccgtggggggcgtagctaccgaaa 37066 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | |||||||| ||||||||||||||||||||||||||| | || |||||||||||||||| Sbjct: 37067 ttaatgcagtcaattatgtctctcctagaagttggttagctacctctcattttgttctag 37126 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||||| || || || |||||||||||||||||||| || || || ||||| |||| Sbjct: 37127 gattcttcttattcgtaggtcatttatggcatgcaggaagggctcgtgcagctgccgcag 37186 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 | |||||||| ||||| ||||||||||| ||||||||||| | ||||| |||||||||| Sbjct: 37187 gatttgaaaaaggaattgatcgtgattttgaacctgttctgttcatgactcctcttaact 37246
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 246 bits (124), Expect = 5e-62 Identities = 250/290 (86%), Gaps = 2/290 (0%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 34854 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactc 34911 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| || |||||||| || || |||||||| || |||||||||||||| | Sbjct: 34912 atgctcctttaggttcgttaaattctgtagggggcgtagctactgagatcaatgcagtca 34971 Query: 121 attatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttt 180 ||||||||||||| |||||||||||||| || |||||||||||||||||||| ||| | | Sbjct: 34972 attatgtctctccgagaagttggttatctacctctcattttgttctaggatttttcctat 35031 Query: 181 ttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagg 240 | ||||| ||||||||||| || ||||| || || || || ||||| || |||||||| | Sbjct: 35032 tcgtgggtcatttatggcacgcgggaagggctcgggcagcggcagcgggatttgaaaaag 35091 Query: 241 gaatcgatcgtgatttggaacctgttctttacatgaaccctcttaactaa 290 |||| ||||||||||| ||||||||||||| ||||| |||||||||||| Sbjct: 35092 gaattgatcgtgattttgaacctgttctttccatgactcctcttaactaa 35141 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 327 ttctggctcggttattctatctagccgagcca 358 ||||||||||| ||| ||||| |||||||||| Sbjct: 35211 ttctggctcggctatactatccagccgagcca 35242
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 242 bits (122), Expect = 7e-61 Identities = 209/238 (87%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| || ||||||||||||||||||||||| || |||| Sbjct: 25912 aatatatgactcatgctcctttaggttccttaaattccgtgggtggcgtagctacagaga 25853 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 25852 ttaatgcagtcaattatgtttctcctagaagttggttagctacttctcattttgttctag 25793 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||| | ||||| |||||||||||||| || |||||||| || || ||||| |||| Sbjct: 25792 gattcttcctatttgtaggccatttatggcacgcgggaagagctcgcgcagctgccgcag 25733 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 | |||||||| ||||| ||||| ||||| ||||| ||||||| ||||| |||||||| Sbjct: 25732 gatttgaaaaaggaattgatcgagattttgaaccagttctttccatgactcctcttaa 25675
>gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9, complete sequence Length = 23359 Score = 240 bits (121), Expect = 3e-60 Identities = 241/279 (86%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 18928 aaaaagacatacagccttggcaag-aacgtcgttccgc-ggaatatatgactcatgctcc 18985 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||| ||||||||||| || ||||| |||||||| |||||||| Sbjct: 18986 tttaggttctttaaattccgttggtggcgtagctacagagattaatgcagtcaattatgt 19045 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 ||||||||||||||||||| | ||||||||||||||||||||||||||| | || || || Sbjct: 19046 ctctcctagaagttggttagctacttctcattttgttctaggattcttcctattcgtagg 19105 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || |||||||| || || ||||| ||||| |||||||| ||||| || Sbjct: 19106 tcatttatggcacgcgggaagagctcgcgcagctgctgcaggatttgaaaaaggaattga 19165 Query: 248 tcgtgatttggaacctgttctttacatgaaccctcttaa 286 ||| ||||| || |||||||||| ||||| |||||||| Sbjct: 19166 tcgagattttgagcctgttctttccatgactcctcttaa 19204
>gb|M27309.1|PEACPD2 Pisum sativum D2 photosystem II protein and 44 kd photosystem II protein genes, complete cds; tRNA-Ser gene, complete sequence; and unknown gene; chloroplast genes for chloroplast products Length = 4078 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 2670 aatatatgactcatgctcctttaggttctttaaattccgtgggtggcgtagctacagaga 2729 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 2730 ttaatgcagtcaattatgtctctcctagaagttggttagctacttctcattttgttctag 2789 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||| | || || || ||||||||||| || |||||||| || || ||||| |||| Sbjct: 2790 gattcttcctattcgtaggtcatttatggcacgcgggaagagctcgcgcagctgccgcag 2849 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 | |||||||| ||||| ||| | ||||| || |||||||||| ||||| |||||||| Sbjct: 2850 gatttgaaaaaggaattgatagagattttgagcctgttctttccatgactcctcttaa 2907
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 230 bits (116), Expect = 3e-57 Identities = 159/171 (92%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| ||||||||||||| ||||| Sbjct: 28543 aaaaagacatacaaccttggcaag-aacgtcgttccgcag-aatatatgacccatgctcc 28600 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 28601 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 28660 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttctt 178 ||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 28661 ctctcctagaagttggttagctacttctcattttgttctaggattcttctt 28711
>gb|AC140103.7| Medicago truncatula clone mth2-9i16, complete sequence Length = 96937 Score = 226 bits (114), Expect = 4e-56 Identities = 207/238 (86%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 59597 aatatatgactcatgctcctttaggttctttaaattccgtgggtggcgtagctacagaga 59656 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | |||||||| |||||||||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 59657 ttaatgcagtcaattatgtctctcctagaagctggttagctacttctcattttgttctag 59716 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||| | || || || |||||||| || || |||||||| || || ||||| |||| Sbjct: 59717 gattcttcctattcgtaggtcatttatgacacgcgggaagagctcgtgcagctgccgcag 59776 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaa 286 | |||||||| ||||| ||||| |||| ||| |||||||||| ||||| |||||||| Sbjct: 59777 gatttgaaaaaggaattgatcgagattcggagcctgttcttttcatgactcctcttaa 59834
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 216 bits (109), Expect = 4e-53 Identities = 243/286 (84%), Gaps = 2/286 (0%) Strand = Plus / Minus Query: 3 gttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccac 62 |||| |||||| |||||| |||||||| | |||| || ||||||| |||||||||| || Sbjct: 78462 gttgaaaaaagacatacagccttggca-ggaacgacgttcagcag-aatatatgactcat 78405 Query: 63 gctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaat 122 ||||||||||| ||||||||||| |||||||| ||||| ||||| |||||||| || ||| Sbjct: 78404 gctcctttaggttctttaaattctgtgggtggtgtagctaccgaaatcaatgcggtgaat 78345 Query: 123 tatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttttt 182 ||||||||||| ||||||||||||| || || ||||| ||||||||||| ||||| || Sbjct: 78344 tatgtctctccccgaagttggttatccacctcccatttcgttctaggatttttcttcttc 78285 Query: 183 gtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaaggga 242 || |||||||| |||||||| ||||| || || || ||||||||||| ||||| || || Sbjct: 78284 gtaggccatttgtggcatgcgggaagggctcgtgcagctgcagcaggatttgagaaaggg 78225 Query: 243 atcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 || ||||||||||| |||||||| |||| ||||| |||||||||| Sbjct: 78224 attgatcgtgatttcgaacctgtcctttccatgactcctcttaact 78179
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 212 bits (107), Expect = 7e-52 Identities = 230/269 (85%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| |||| || || || | |||||||||| |||||||| Sbjct: 26299 aaaaagacatacagccttggcaag-aacgtcgttccgc-ggaatatatgactcacgctcc 26242 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| || |||||||||||||| || ||||| || |||||||||||||| ||||| || Sbjct: 26241 tttaggttccttaaattccgtggggggtgtagctacggagatcaatgcagtcaattacgt 26182 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||||||||||||||| | |||||||| ||||||||||||||||| | || ||||| Sbjct: 26181 ttctcctagaagttggttagctacttctcactttgttctaggattctttctattcgtggg 26122 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||||||||| || |||||||| || || ||||| || || |||||||| ||||| || Sbjct: 26121 tcatttatggcacgctggaagagctcgcgcagctgccgcgggatttgaaaaaggaattga 26062 Query: 248 tcgtgatttggaacctgttctttacatga 276 ||| ||||| ||||||||||||| ||||| Sbjct: 26061 tcgagattttgaacctgttctttccatga 26033
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 202 bits (102), Expect = 6e-49 Identities = 237/280 (84%), Gaps = 2/280 (0%) Strand = Plus / Minus Query: 9 aaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcct 68 ||||| |||||| |||||||| | |||| || ||||||| |||||||||| || |||||| Sbjct: 80421 aaaagacatacagccttggca-ggaacgacgttcagcag-aatatatgactcatgctcct 80364 Query: 69 ttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgtc 128 ||||| ||||||||||| |||||||| ||||| ||||| |||||||| || ||||||||| Sbjct: 80363 ttaggttctttaaattctgtgggtggtgtagctaccgaaatcaatgcggtgaattatgtc 80304 Query: 129 tctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtgggc 188 ||||| ||||||||||||| || || ||||| ||||||||||| ||||| || || || Sbjct: 80303 tctccccgaagttggttatccacctcccatttcgttctaggatttttcttcttcgtaggt 80244 Query: 189 catttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcgat 248 ||||| |||||||| ||||| || || || ||||||||||| ||||| || || || ||| Sbjct: 80243 catttgtggcatgcgggaagggctcgtgcagctgcagcaggatttgagaaagggattgat 80184 Query: 249 cgtgatttggaacctgttctttacatgaaccctcttaact 288 |||||||| |||||||| |||| ||||| |||||||||| Sbjct: 80183 cgtgatttcgaacctgtcctttccatgactcctcttaact 80144
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 190 bits (96), Expect = 2e-45 Identities = 223/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||| ||||| || ||||| Sbjct: 41005 aaaaagatatacaaccttggcaag-aacgtcgatctgcag-aatacatgactcatgctcc 41062 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 ||||| || |||||||| || ||||| ||||| || || || |||||||| |||||||| Sbjct: 41063 attaggatcattaaattctgtaggtggagtagcaacagaaattaatgcagtaaattatgt 41122 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||||||||||||||| |||| |||||||| ||| |||| ||||| || ||||| || Sbjct: 41123 ttctcctagaagttggttagcaacatctcatttcgttttaggtttctttttctttgtagg 41182 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 || ||||||||||| |||||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 41183 gcacttatggcatgctggaagagcacgtgctgctgcagctggttttgaaaaaggaattga 41242 Query: 248 tcgtgatttggaacctgttcttt 270 ||||||||| ||||| ||||||| Sbjct: 41243 tcgtgattttgaaccagttcttt 41265
>emb|X01647.1|CHMPTRN Marchantia polymorpha chloroplast DNA for tRNA-Ser(UGA), tRNA-Gly(GCC), tRNA-Met(CAU), ORF701, ORF702 and ORF703 Length = 3381 Score = 190 bits (96), Expect = 2e-45 Identities = 223/263 (84%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||| ||||| || ||||| Sbjct: 1227 aaaaagatatacaaccttggcaag-aacgtcgatctgcag-aatacatgactcatgctcc 1284 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 ||||| || |||||||| || ||||| ||||| || || || |||||||| |||||||| Sbjct: 1285 attaggatcattaaattctgtaggtggagtagcaacagaaattaatgcagtaaattatgt 1344 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||||||||||||||| |||| |||||||| ||| |||| ||||| || ||||| || Sbjct: 1345 ttctcctagaagttggttagcaacatctcatttcgttttaggtttctttttctttgtagg 1404 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 || ||||||||||| |||||||| || ||||||||||| ||||||||||| ||||| || Sbjct: 1405 gcacttatggcatgctggaagagcacgtgctgctgcagctggttttgaaaaaggaattga 1464 Query: 248 tcgtgatttggaacctgttcttt 270 ||||||||| ||||| ||||||| Sbjct: 1465 tcgtgattttgaaccagttcttt 1487
>gb|AY147792.1| Abies alba photosystem II 44 kDa protein (psbC) gene, psbC-B allele, complete cds; chloroplast gene for chloroplast product Length = 1571 Score = 182 bits (92), Expect = 6e-43 Identities = 203/240 (84%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| |||| |||||| |||||||| ||||| ||||| | Sbjct: 374 aatatatgactcatgctcctttaggttcttcaaattctgtgggtggtgtagctaccgaaa 315 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 ||||||| || |||||||||||||| ||||||||||||| || || ||||| ||| ||| Sbjct: 314 tcaatgcggtgaattatgtctctccccgaagttggttatccacctcccatttcgttttag 255 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||| ||||| || | || ||||| |||||||| ||||| || || || |||||||||| Sbjct: 254 gatttttcttgttcataggtcatttgtggcatgcgggaagggctcgtgcagctgcagcag 195 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 | |||||||| ||||| ||||||||||| |||||||| |||| ||||| |||||||||| Sbjct: 194 gatttgaaaaaggaattgatcgtgatttcgaacctgtcctttccatgactcctcttaact 135
>gb|AY147791.1| Abies alba photosystem II 44 kDa protein (psbC) gene, psbC-A allele, complete cds; chloroplast gene for chloroplast product Length = 1571 Score = 182 bits (92), Expect = 6e-43 Identities = 203/240 (84%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| |||| |||||| |||||||| ||||| ||||| | Sbjct: 374 aatatatgactcatgctcctttaggttcttcaaattctgtgggtggtgtagctaccgaaa 315 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 ||||||| || |||||||||||||| ||||||||||||| || || ||||| ||| ||| Sbjct: 314 tcaatgcggtgaattatgtctctccccgaagttggttatccacctcccatttcgttttag 255 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||| ||||| || | || ||||| |||||||| ||||| || || || |||||||||| Sbjct: 254 gatttttcttgttcataggtcatttgtggcatgcgggaagggctcgtgcagctgcagcag 195 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 | |||||||| ||||| ||||||||||| |||||||| |||| ||||| |||||||||| Sbjct: 194 gatttgaaaaaggaattgatcgtgatttcgaacctgtcctttccatgactcctcttaact 135
>emb|X05295.1|CHZPTRNS Zea perennis cpDNA EcoRI-PstI fragment containing length mutation LM-3 from large unique sequence region Length = 831 Score = 176 bits (89), Expect = 4e-41 Identities = 147/166 (88%), Gaps = 2/166 (1%) Strand = Plus / Plus Query: 220 ctgcagcaggttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaacc 279 ||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| || Sbjct: 1 ctgcagcagcgtttgaaaagggaattgatcgcgatttggaacctgttctttacatgaccc 60 Query: 280 ctcttaactaagattttcttatttatacctgttctacnnnnnnnctgttctggctcggtt 339 ||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 61 ctcttaactaagatttt-ttatttatacctgttctagtttttttctgttctggctcggtt 119 Query: 340 attctatctagccgagccattcattcctttttatgaaagaaagata 385 |||| ||||||||||| ||||||| | |||||||||||||| |||| Sbjct: 120 attccatctagccgag-cattcatgcttttttatgaaagaatgata 164
>gb|AF239778.1| Chloranthus japonicus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 174 bits (88), Expect = 1e-40 Identities = 139/154 (90%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaattatgt 2188 Query: 128 ctctcctagaagttggttatcaacttctcatttt 161 ||||||||||||||||||| | || ||||||||| Sbjct: 2189 ctctcctagaagttggttagctacctctcatttt 2222
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 172 bits (87), Expect = 6e-40 Identities = 224/268 (83%), Gaps = 2/268 (0%) Strand = Plus / Minus Query: 3 gttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccac 62 |||| |||||| || ||||||||||||| || | || || |||| |||||||||| || Sbjct: 42364 gttgaaaaaagatattcaaccttggcaagaaa-gacgttctgcag-aatatatgactcat 42307 Query: 63 gctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaat 122 ||||| ||||| ||||||||||| || ||||| ||||| || || || |||||||| ||| Sbjct: 42306 gctccgttaggttctttaaattctgtaggtggtgtagctactgaaattaatgcagtaaat 42247 Query: 123 tatgtctctcctagaagttggttatcaacttctcattttgttctaggattcttctttttt 182 ||||| ||||| | ||||||||| | |||||||| ||||| ||||||| ||||| ||| Sbjct: 42246 tatgtgtctccacgtagttggttagctacttctcactttgtattaggatttttcttcttt 42187 Query: 183 gtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaaggga 242 || || ||||||||||||||||||||||| || || |||||||| || |||||||| ||| Sbjct: 42186 gtaggtcatttatggcatgcaggaagagcacgtgcagctgcagctggatttgaaaaagga 42127 Query: 243 atcgatcgtgatttggaacctgttcttt 270 || ||||||||||| || |||||||||| Sbjct: 42126 attgatcgtgattttgagcctgttcttt 42099
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 159 bits (80), Expect = 9e-36 Identities = 213/255 (83%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 16 atacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcctttaggct 75 |||||||||||||| | |||| || || |||| |||||||||| || |||||||| || | Sbjct: 35513 atacaaccttggca-ggaacgacgttcggcag-aatatatgactcatgctcctttgggtt 35456 Query: 76 ctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgtctctccta 135 |||| ||||| |||||||| ||||| || ||||| ||||| || || ||||| |||||| Sbjct: 35455 ctttgaattctgtgggtggagtagctactgagataaatgctgtgaactatgtatctcctc 35396 Query: 136 gaagttggttatcaacttctcattttgttctaggattcttcttttttgtgggccatttat 195 ||||||||||| | ||||| ||||| |||||||| |||||||||||||| || ||||||| Sbjct: 35395 gaagttggttagccacttcccatttcgttctaggtttcttcttttttgtaggtcatttat 35336 Query: 196 ggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcgatcgtgatt 255 |||| || |||||||| || || |||||||| || || || || ||||| ||||||||| Sbjct: 35335 ggcacgcgggaagagctcgggccgctgcagctggattcgagaaaggaattgatcgtgata 35276 Query: 256 tggaacctgttcttt 270 ||||||||||||| Sbjct: 35275 ctgaacctgttcttt 35261
>gb|AY116657.1| Trimenia moorei photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 153 bits (77), Expect = 5e-34 Identities = 136/154 (88%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| ||||| || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgctcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 ||||| |||||||||||||||||||| ||| | ||||||||||||||||| |||||||| Sbjct: 2129 cttaggttctttaaattccgtgggtggtgtanctaccgagatcaatgcagtcaattatgt 2188 Query: 128 ctctcctagaagttggttatcaacttctcatttt 161 |||||| |||||||||||| | || ||||||||| Sbjct: 2189 ctctcccagaagttggttagctacctctcatttt 2222
>ref|XM_475050.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 143 bits (72), Expect = 5e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 203 aggaagagcccgagctgctgcagcaggttttgaaaagggaatcgatcgtgatttggaacc 262 |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 867 aggaagagcccgggctgctgcagcaggatttgaaaagggaatcgatcgtgatttggagcc 926 Query: 263 tgttctttacatgaaccctcttaactaa 290 |||||||||||||| ||||||||||||| Sbjct: 927 tgttctttacatgacccctcttaactaa 954
>gb|AF528937.1| Ribes aureum photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 139 bits (70), Expect = 8e-30 Identities = 111/123 (90%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| ||||||| || || | |||||||||| | Sbjct: 2064 aggttgaaaaaagacatacaaccttggcaag-aacggcgttccgc-ggaatatatgactc 2121 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 2122 atgctcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtca 2181 Query: 121 att 123 ||| Sbjct: 2182 att 2184
>gb|AY147656.1| Typha angustifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 137 bits (69), Expect = 3e-29 Identities = 106/116 (91%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagttaatt 2184
>gb|AF528940.1| Stewartia pseudocamellia photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 137 bits (69), Expect = 3e-29 Identities = 106/116 (91%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || |||| ||||||||||||| ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacggcgttccgcag-aatatatgacccatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtggggggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF528930.1| Hydrangea macrophylla photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 137 bits (69), Expect = 3e-29 Identities = 106/116 (91%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacggcgttccgcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 137 bits (69), Expect = 3e-29 Identities = 115/127 (90%), Gaps = 3/127 (2%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||| ||||| |||| || || |||| |||||||||||| Sbjct: 82823 aggttgaaaaaagacatacaaccttagcaag-aacgacgttcggcag-aatatatgaccc 82880 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 82881 atgctcctt-aggctctttaaattctgtgggtggcgtagctaccgagatcaatgcagtta 82939 Query: 121 attatgt 127 ||||||| Sbjct: 82940 attatgt 82946
>gb|AY705177.1| Erythrorchis cassythoides PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 135 bits (68), Expect = 1e-28 Identities = 102/111 (91%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| |||||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcacgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1440
>gb|AY147644.1| Stemona tuberosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 131 bits (66), Expect = 2e-27 Identities = 105/116 (90%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| ||||| |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgctcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 2129 tttaggttctttaaattccgtgggtggagtagctaccganatcaatgcagttaatt 2184
>gb|AF123825.1|AF123825 Liriodendron tulipifera photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 131 bits (66), Expect = 2e-27 Identities = 105/116 (90%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2066 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2123 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2124 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagttaatt 2179
>gb|AY147674.1| Xeronema callistemon photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 129 bits (65), Expect = 8e-27 Identities = 105/116 (90%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147661.1| Blandfordia punicea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 129 bits (65), Expect = 8e-27 Identities = 105/116 (90%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147649.1| Ensete ventricosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 129 bits (65), Expect = 8e-27 Identities = 105/116 (90%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF525949.1| Taxodium distichum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2220 Score = 129 bits (65), Expect = 8e-27 Identities = 120/136 (88%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2087 aaaaagacatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2144 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| |||||||| ||| | |||||||| ||||| || |||||||| Sbjct: 2145 tttaggttctttaaattctgtgggtggtgtacctaccgagattaatgcggtcaattatgt 2204 Query: 128 ctctcctagaagttgg 143 ||| |||||||||||| Sbjct: 2205 ctcccctagaagttgg 2220
>gb|AF123827.1|AF123827 Trochodendron aralioides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2177 Score = 129 bits (65), Expect = 8e-27 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || || | |||||||||| || ||||| Sbjct: 2066 aaaaagacatacaaccttggcaag-aacggcgttccgc-ggaatatatgactcatgctcc 2123 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2124 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 2174
>gb|AF528927.1| Euptelea polyandra photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 127 bits (64), Expect = 3e-26 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || || | ||||||| || || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacggcgttccgc-ggaatatatsactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY705200.1| Cleistes sp. Jardim 2579 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagccaccgagatcaatgcagt 1440
>gb|AY705199.1| Cleistes cipoana PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagccaccgagatcaatgcagt 1440
>gb|AY705198.1| Cleistes divaricata PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1440
>gb|AY705191.1| Epistephium sp. Chase O-432 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 127 bits (64), Expect = 3e-26 Identities = 106/118 (89%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| |||||| |||||||||| ||||||| || |||| |||||||||| | Sbjct: 1325 aggttgaaaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactc 1382 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 | ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1383 atgctcctttaggctctttaaattctgtgggtggcgtggctaccgagatcaatgcagt 1440
>gb|AY705184.1| Vanilla roscheri PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1311 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1368 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1369 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1419
>gb|AY705182.1| Vanilla cf. planifolia Chase O-170 PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1311 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1368 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1369 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1419
>gb|AY705181.1| Vanilla africana PsbC (psbC) gene, partial cds; chloroplast Length = 1428 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1318 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1375 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1376 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1426
>gb|AY705180.1| Vanilla aphylla PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1311 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1368 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1369 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1419
>gb|AY705178.1| Erythrorchis altissima PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1442 Score = 127 bits (64), Expect = 3e-26 Identities = 101/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1440
>gb|AY705188.1| Pseudovanilla ponapensis PsbC (psbC) gene, partial cds; chloroplast Length = 1439 Score = 125 bits (63), Expect = 1e-25 Identities = 100/110 (90%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcag 117 |||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcag 1439
>gb|AY147660.1| Astelia alpina photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 123 bits (62), Expect = 5e-25 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccganatcaatgcagtcaatt 2184
>gb|AF528931.1| Nelumbo lutea photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 123 bits (62), Expect = 5e-25 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgtcgttccgc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF528929.1| Hernandia peltata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 123 bits (62), Expect = 5e-25 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttagggtctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF462401.1| Cedrus deodara photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 123 bits (62), Expect = 5e-25 Identities = 131/152 (86%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 9 aaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcct 68 ||||| |||||| |||||||| | |||| || || |||| |||||||||| || |||||| Sbjct: 2072 aaaagacatacagccttggca-ggaacgacgttcggcag-aatatatgactcatgctcct 2129 Query: 69 ttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgtc 128 ||||| ||||||||||| |||||||| ||||| ||||| |||||||| || ||||||||| Sbjct: 2130 ttaggttctttaaattctgtgggtggtgtagctaccgaaatcaatgcggtgaattatgtc 2189 Query: 129 tctcctagaagttggttatcaacttctcattt 160 ||||| ||||||||||||| || |||||||| Sbjct: 2190 tctccccgaagttggttatccacctctcattt 2221
>gb|AF123816.1|AF123816 Calycanthus floridus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 123 bits (62), Expect = 5e-25 Identities = 103/115 (89%), Gaps = 2/115 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || || | |||||||||| | Sbjct: 2064 aggttgaaaaaagacatacaaccttggcaag-aacgacgttccgc-ggaatatatgactc 2121 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgc 115 | ||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 2122 atgctcctttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgc 2176
>gb|AF239785.1| Magnolia stellata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 123 bits (62), Expect = 5e-25 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagttaatt 2184
>gb|AY147663.1| Curculigo capitulata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 121 bits (61), Expect = 2e-24 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || || || Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147655.1| Talbotia elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 121 bits (61), Expect = 2e-24 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| | ||||| ||||||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-agcggcgttcagcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| ||||||||||| || ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtggctaccgagatcaatgcagtcaatt 2184
>gb|AY147653.1| Philydrum lanuginosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 121 bits (61), Expect = 2e-24 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||| ||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatacatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtaaatt 2184
>gb|AY147650.1| Hydrothrix gardneri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 121 bits (61), Expect = 2e-24 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggggtagctaccgagatcaatgcagtcaatt 2184
>gb|AF528934.1| Phytolacca americana photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 121 bits (61), Expect = 2e-24 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtacctaccgagatcaatgcagtcaatt 2184
>gb|AF528924.1| Cornus mas photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 121 bits (61), Expect = 2e-24 Identities = 104/116 (89%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| ||||||||||||| ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttccgcag-aatatatgacccatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtacctaccgagatcaatgcagtcaatt 2184
>gb|AY936348.1| Cuscuta sandwichiana PsaB (psaB) and Rps14 (rps14) genes, complete cds; tRNA-Met and tRNA-Gly genes, complete sequence; Ycf9 (ycf9) gene, complete cds; tRNA-Ser gene, complete sequence; PsbC (psbC) and PsbD (psbD) genes, complete cds; tRNA-Thr, tRNA-Glu, tRNA-Tyr, and tRNA-Asp genes, complete sequence; and PsbM (psbM) gene, complete cds; chloroplast Length = 7350 Score = 121 bits (61), Expect = 2e-24 Identities = 214/263 (81%), Gaps = 2/263 (0%) Strand = Plus / Minus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||| | ||||||| || |||| |||||||||| || || || Sbjct: 3959 aaaaagatatacaaccttggca-ggaacggcgttccgcag-aatatatgactcatgcccc 3902 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaattatgt 127 |||||| ||||||||||| || || || || || || || || |||||||| |||||||| Sbjct: 3901 tttaggttctttaaattctgtcggaggtgtggctactgaaataaatgcagtcaattatgt 3842 Query: 128 ctctcctagaagttggttatcaacttctcattttgttctaggattcttcttttttgtggg 187 |||||| ||||||||||| |||| || |||||| ||||||||| ||||||||||| || Sbjct: 3841 ctctccaagaagttggttggcaacctcacatttttgtctaggatttttcttttttgttgg 3782 Query: 188 ccatttatggcatgcaggaagagcccgagctgctgcagcaggttttgaaaagggaatcga 247 ||||| ||||| || || | || || || || ||||| || ||||| || ||||| || Sbjct: 3781 tcatttgtggcacgcgggccgggctcgggcggcggcagctgggtttgagaaaggaattga 3722 Query: 248 tcgtgatttggaacctgttcttt 270 ||| ||||| ||||| ||||||| Sbjct: 3721 tcgggatttcgaaccggttcttt 3699
>gb|AY705206.1| Pogonia ophioglossoides PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1331 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1388 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1389 gttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1439
>gb|AY705205.1| Pogonia japonica PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1331 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1388 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1389 gttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1439
>gb|AY705204.1| Pogonia minor PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1331 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1388 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1389 gttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1439
>gb|AY705203.1| Cleistes rosea PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagccaccgagattaatgcagt 1440
>gb|AY705201.1| Cleistes sp. Chase O-430 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| || |||||||||||||| Sbjct: 1390 tttaggttctttaaattccgtgggtggcgtagctactgagatcaatgcagt 1440
>gb|AY705197.1| Isotria verticillata PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1436 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1326 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1383 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1384 cttaggttctttaaattccgtgggtggcgtagccaccgagatcaatgcagt 1434
>gb|AY705196.1| Isotria medeoloides PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1332 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1389 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1390 cttaggttctttaaattccgtgggtggcgtagccaccgagatcaatgcagt 1440
>gb|AY705195.1| Epistephium subrepens PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| |||||| |||||||||| ||||||| || |||| |||||||||| | Sbjct: 1325 aggttgaaaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactc 1382 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 | ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1383 atgctcctttaggttctttaaattctgtgggtggcgtggctaccgagatcaatgcagt 1440
>gb|AY705194.1| Epistephium parviflorum PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| |||||| |||||||||| ||||||| || |||| |||||||||| | Sbjct: 1325 aggttgaaaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactc 1382 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 | ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1383 atgctcctttaggttctttaaattctgtgggtggcgtggctaccgagatcaatgcagt 1440
>gb|AY705193.1| Epistephium lucidum PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| |||||| |||||||||| ||||||| || |||| |||||||||| | Sbjct: 1325 aggttgaaaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactc 1382 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 | ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1383 atgctcctttaggttctttaaattctgtgggtggcgtggctaccgagatcaatgcagt 1440
>gb|AY705192.1| Epistephium sp. Chase O-433 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 119 bits (60), Expect = 7e-24 Identities = 105/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| |||||| |||||||||| ||||||| || |||| |||||||||| | Sbjct: 1325 aggttgaaaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactc 1382 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 | ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 1383 atgctcctttaggttctttaaattctgtgggtggcgtggctaccgagatcaatgcagt 1440
>gb|AY705179.1| Vanilla imperialis PsbC (psbC) gene, partial cds; chloroplast Length = 1419 Score = 119 bits (60), Expect = 7e-24 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||| ||||| || ||||| Sbjct: 1311 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatacatgactcatgctcc 1368 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1369 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagt 1419
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 119 bits (60), Expect = 7e-24 Identities = 162/196 (82%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||| ||||| |||||||| | || ||||||||||| || ||||| ||||| || || | Sbjct: 60828 aatacatgactcacgctccacttggatctttaaattctgttggtggtgtagctactgaaa 60769 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | ||||| ||||| || || |||||| | ||||||||||||||||||||||||||||| | Sbjct: 60768 ttaatgctgttaactacgtttctcctcgtagttggttatcaacttctcattttgttcttg 60709 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 ||||||| || || || | || || |||||||| |||||||| || ||||| ||||| | Sbjct: 60708 gattctttttcttcgttgctcacttgtggcatgctggaagagctcgtgctgcagcagctg 60649 Query: 229 gttttgaaaagggaat 244 |||||||||| ||||| Sbjct: 60648 gttttgaaaaaggaat 60633
>gb|AF239776.1| Ascarina lucida photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 117 bits (59), Expect = 3e-23 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctaccgagatcaatgcagtcaatt 2184
>gb|AY147672.1| Sisyrinchium montanum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | || |||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctactgagatcaatgcagtcaatt 2184
>gb|AY147669.1| Lanaria lanata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctaccgaaatcaatgcagtcaatt 2184
>gb|AY147652.1| Palisota bogneri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 108/123 (87%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| |||||| |||||||||| |||| || || |||| |||||||||| | Sbjct: 2064 aggttgaaaaaagacatacagccttggcaag-aacgacgttcggcag-aatatatgactc 2121 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||| | Sbjct: 2122 atgctcctttaggttctttaaattctgtgggtggcgtanctaccgagatcaatgcagtca 2181 Query: 121 att 123 ||| Sbjct: 2182 att 2184
>gb|AF528932.1| Pachysandra terminalis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || || | |||||||||| || || || Sbjct: 2071 aaaaagacatacaaccttggcaag-aacggcgttccgc-ggaatatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctacagagatcaatgcagtcaatt 2184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 115 bits (58), Expect = 1e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 324 ctgttctggctcggttattctatctagccgagccattcattcctttttatgaaagaaaga 383 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 34185142 ctgttctggctcgggtattctatctagccgagccattcattcctttctatgaaagaaaga 34185201 Query: 384 taaggg 389 |||||| Sbjct: 34185202 taaggg 34185207 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 205 gaagagcccgagctgctgcagcaggttttgaaaaggga 242 |||||||||| |||||||| | ||| |||||||||||| Sbjct: 36034486 gaagagcccgggctgctgctgtaggatttgaaaaggga 36034449
>gb|AF239777.1| Austrobaileya scandens photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctactgagatcaatgcagtcaatt 2184
>gb|AF188854.1|AF188854 Nymphaea odorata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 108/123 (87%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || || | |||||||||| | Sbjct: 2064 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactc 2121 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| | Sbjct: 2122 atgctcctttaggttctttaaattccgtgggtggtgtagctacagagatcaatgcagtca 2181 Query: 121 att 123 ||| Sbjct: 2182 att 2184
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 115 bits (58), Expect = 1e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 324 ctgttctggctcggttattctatctagccgagccattcattcctttttatgaaagaaaga 383 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 34275614 ctgttctggctcgggtattctatctagccgagccattcattcctttctatgaaagaaaga 34275673 Query: 384 taaggg 389 |||||| Sbjct: 34275674 taaggg 34275679 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Minus Query: 205 gaagagcccgagctgctgcagcaggttttgaaaaggga 242 |||||||||| |||||||| | ||| |||||||||||| Sbjct: 36124560 gaagagcccgggctgctgctgtaggatttgaaaaggga 36124523
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 115 bits (58), Expect = 1e-22 Identities = 64/66 (96%) Strand = Plus / Plus Query: 324 ctgttctggctcggttattctatctagccgagccattcattcctttttatgaaagaaaga 383 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 148954 ctgttctggctcgggtattctatctagccgagccattcattcctttctatgaaagaaaga 149013 Query: 384 taaggg 389 |||||| Sbjct: 149014 taaggg 149019
>gb|AF123823.1|AF123823 Illicium parviflorum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2066 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2123 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 2124 tttaggttctttaaattccgtgggtggcgtagctactgagatcaatgcagtcaatt 2179
>gb|AF239794.1| Spathiphyllum wallisii photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| |||||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgccgttcggc-ggaatatatgactcacgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 | |||| |||||||||||||||||||||||||| || |||||||||||||| |||| Sbjct: 2129 tctaggttctttaaattccgtgggtggcgtagctactgagatcaatgcagtcaatt 2184
>gb|AF239791.1| Schisandra chinensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 115 bits (58), Expect = 1e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY021963.1| Oryza sativa microsatellite MRG4288 containing (TA)X49, genomic sequence Length = 298 Score = 113 bits (57), Expect = 5e-22 Identities = 73/77 (94%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 ||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 296 aatatatgacccatgctcctt-aggctctttaaattctgtgggtggcgtagctaccgaga 238 Query: 109 tcaatgcagttaattat 125 ||||||||||||||||| Sbjct: 237 tcaatgcagttaattat 221
>gb|AY147678.1| Chlorophytum comosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147676.1| Aphyllanthes monspeliensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| ||||| |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgctcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtagctaccgagatcaatgcagtgaatt 2184
>gb|AY147665.1| Cypripedium passerinum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacagccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggtgtagccaccgagatcaatgcagtcaatt 2184
>gb|AY147662.1| Coelogyne cristata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacagccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147645.1| Zigadenus elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| || || ||||| ||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctactgaaatcaacgcagtcaatt 2184
>gb|AY147639.1| Scheuchzeria palustris photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 97/108 (89%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgc 115 |||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgc 2176
>gb|AF528935.1| Piper betle photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 98/109 (89%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 15 catacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcctttaggc 74 ||||||||||||||||| |||| || || |||| | |||||||| || ||||||||||| Sbjct: 2078 catacaaccttggcaag-aacgacgttccgcag-agtatatgactcatgctcctttaggt 2135 Query: 75 tctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2136 tctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF528922.1| Canella winterana photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 113 bits (57), Expect = 5e-22 Identities = 99/111 (89%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagt 2179
>gb|DQ069645.1| Nuphar advena photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1275 Score = 113 bits (57), Expect = 5e-22 Identities = 104/118 (88%), Gaps = 2/118 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || || | |||||||||| | Sbjct: 1156 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactc 1213 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 | ||||||||||| |||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 1214 atgctcctttaggttctttaaattccgtgggtggtgtagctacagagatcaatgcagt 1271
>gb|AF123813.1|AF123813 Acorus calamus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2181 Score = 113 bits (57), Expect = 5e-22 Identities = 99/111 (89%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2069 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2126 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 2127 tttagggtctttaaattccgtgggtggtgtagctaccgagatcaatgcagt 2177
>gb|AF239789.1| Sagittaria latifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2185 Score = 113 bits (57), Expect = 5e-22 Identities = 103/116 (88%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| ||||| |||| |||||||||| || ||||| Sbjct: 2072 aaaaagacatacaaccttggcaag-aacgacgctcggcag-aatatatgactcatgctcc 2129 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| || |||||||| |||||||| ||||| ||||||||||||||||| |||| Sbjct: 2130 tttaggttccttaaattctgtgggtggtgtagctaccgagatcaatgcagtcaatt 2185
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 111 bits (56), Expect = 2e-21 Identities = 161/196 (82%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || || || |||||||| ||||| || || || || ||||| ||||||| Sbjct: 31606 aatatatgactcatgcacccttaggctccttaaactctgtaggcggggtagctaccgaga 31547 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | ||||| || || ||||| ||||| ||||||||||| |||||||||| |||||| | | Sbjct: 31546 ttaatgctgtaaactatgtatctccccgaagttggttagcaacttctcactttgttttgg 31487 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 ||||||| || |||||||||||| ||||||| ||||| || || || || || ||||| | Sbjct: 31486 gattctttttctttgtgggccatctatggcacgcaggtagggctcgtgcagccgcagccg 31427 Query: 229 gttttgaaaagggaat 244 | |||||||| ||||| Sbjct: 31426 gctttgaaaaaggaat 31411
>gb|AY147664.1| Cyanastrum cordifolium photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 111 bits (56), Expect = 2e-21 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | |||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctaccgnnatcaatgcagtcaatt 2184
>gb|AF528936.1| Platanus occidentalis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 111 bits (56), Expect = 2e-21 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || || | |||| ||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacggcgttccgc-ggaatanatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | || |||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctacagagatcaatgcagtcaatt 2184
>gb|AY705211.1| Apostasia stylidioides PsbC (psbC) gene, partial cds; chloroplast Length = 1406 Score = 111 bits (56), Expect = 2e-21 Identities = 89/98 (90%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || ||||||| |||||||||| | Sbjct: 1311 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcagcag-aatatatgactc 1368 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgta 98 | ||||||||||| |||||||||||||||||||||||| Sbjct: 1369 atgctcctttaggttctttaaattccgtgggtggcgta 1406
>gb|AY705202.1| Cleistes sp. Thomas 12975 PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 111 bits (56), Expect = 2e-21 Identities = 99/111 (89%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1331 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1388 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 1389 tttaggttctttaaattccgtgggtggcgtagctaccgaaattaatgcagt 1439
>gb|AY705190.1| Clematepistephium smilacifolium PsbC (psbC) gene, partial cds; chloroplast Length = 1429 Score = 111 bits (56), Expect = 2e-21 Identities = 99/111 (89%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1319 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1376 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| |||||||||||||||||||||||| | || |||||||||||||| Sbjct: 1377 tttaggttctttaaattccgtgggtggcgtaactactgagatcaatgcagt 1427
>gb|AY147667.1| Iris missouriensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 109 bits (55), Expect = 7e-21 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| || | ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctactgnnatcaatgcagtcaatt 2184
>emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome Length = 143171 Score = 109 bits (55), Expect = 7e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| ||||||||||| || || || || || || |||| Sbjct: 24325 aatatatgacgcatgctcctttagggtctttaaattctgttggaggtgttgctacagaga 24384 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | ||||| || |||| || ||||||||||||||| |||| |||||||||||| ||| Sbjct: 24385 ttaatgctgtaaatttcgttaatcctagaagttggttggcaacatctcattttgttttag 24444 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||||||||| || |||||||||||||| || ||||| || || ||||| | Sbjct: 24445 ctttcttcttttttgttggtcatttatggcatgccggtagagctcgtgcggctgctattg 24504 Query: 229 gttttgaaaagggaatcgatcgt 251 |||||||||| ||||| |||||| Sbjct: 24505 gttttgaaaaaggaattgatcgt 24527
>emb|X00929.1|CHEGPSB Euglena gracilis chloroplast DNA for photosystem II psbA gene and tRNA-Leu2 Length = 4904 Score = 109 bits (55), Expect = 7e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| ||||||||||| || || || || || || |||| Sbjct: 1188 aatatatgacgcatgctcctttagggtctttaaattctgttggaggtgttgctacagaga 1247 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | ||||| || |||| || ||||||||||||||| |||| |||||||||||| ||| Sbjct: 1248 ttaatgctgtaaatttcgttaatcctagaagttggttggcaacatctcattttgttttag 1307 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||||||||| || |||||||||||||| || ||||| || || ||||| | Sbjct: 1308 ctttcttcttttttgttggtcatttatggcatgccggtagagctcgtgcggctgctattg 1367 Query: 229 gttttgaaaagggaatcgatcgt 251 |||||||||| ||||| |||||| Sbjct: 1368 gttttgaaaaaggaattgatcgt 1390
>gb|AY147658.1| Alania endlicheri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 107 bits (54), Expect = 3e-20 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| |||| || || |||| |||||||||| || || || Sbjct: 2071 aaaaagacatacagccttggcaag-aacgacgttcggcag-aatatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctaccgagatcaatgcagtcaatt 2184
>gb|AY147646.1| Ananas comosus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2146 Score = 107 bits (54), Expect = 3e-20 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || |||||||||| || ||||| Sbjct: 2033 aaaaagacatacaaccttggcaag-aacgacgtncancan-aatatatgactcatgctcc 2090 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | ||||| ||||||||||| |||| Sbjct: 2091 tttaggttctttaaattccgtgggtggcgtanctaccganatcaatgcagtcaatt 2146
>gb|AF528941.1| Tasmannia lanceolata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 107 bits (54), Expect = 3e-20 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||||| || |||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtagctacagagatcaatgcagtcaatt 2184
>gb|AF528938.1| Saruma henryi photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 107 bits (54), Expect = 3e-20 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| ||||| || | | |||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgctctgc-ggagtatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggcgtacctaccgagatcaatgcagtcaatt 2184
>gb|AF528920.1| Aristolochia macrophylla photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 107 bits (54), Expect = 3e-20 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | | |||||||| || || || Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttctgc-ggagtatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147684.1| Yucca glauca photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 105 bits (53), Expect = 1e-19 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattcggtaggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147682.1| Muscari comosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 105 bits (53), Expect = 1e-19 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| | ||||| ||||||| |||||||||| || || || Sbjct: 2071 aaaaagatatacaaccttggcaag-agcggcgttcagcag-aatatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147679.1| Lomandra longifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 105 bits (53), Expect = 1e-19 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||||| ||||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtagctaccgaaatcaatgcagtcaatt 2184
>gb|AY147647.1| Cartonema philydroides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 105 bits (53), Expect = 1e-19 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| || ||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacagccgtggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtagctaccgaaatcaatgcagtcaatt 2184
>gb|AF528939.1| Spinacia oleracea photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 105 bits (53), Expect = 1e-19 Identities = 102/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||| || || ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggggtggctaccgagatcaatgcagtcaatt 2184
>gb|AF123826.1|AF123826 Saururus cernuus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2180 Score = 105 bits (53), Expect = 1e-19 Identities = 98/111 (88%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | | |||||||| || ||||| Sbjct: 2069 aaaaagacatacaaccttggcaag-aacgacgttccgc-ggagtatatgactcatgctcc 2126 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2127 tttaggttctttaaattctgtgggtggcgtagctaccgagatcaatgcagt 2177
>gb|AF123824.1|AF123824 Lactoris fernandeziana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2180 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 51 tatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatc 110 |||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 2108 tatatgactcatgctcctttaggttctttaaattccgtgggtggcgtagctaccgagatc 2167 Query: 111 aatgcagttaatt 123 |||||||| |||| Sbjct: 2168 aatgcagtcaatt 2180
>gb|AF123820.1|AF123820 Drimys winteri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2161 Score = 105 bits (53), Expect = 1e-19 Identities = 98/111 (88%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2049 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2106 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagt 118 |||||| ||||||||||| |||||||||||||| || |||||||||||||| Sbjct: 2107 tttaggttctttaaattctgtgggtggcgtagctacagagatcaatgcagt 2157
>gb|AF123815.1|AF123815 Cabomba caroliniana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 105 bits (53), Expect = 1e-19 Identities = 107/123 (86%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| |||| || || |||| |||||||||| | Sbjct: 2064 aggttgaaaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactc 2121 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | ||||| || || |||||||||||||||||||| ||||| || |||||||||||||| | Sbjct: 2122 atgctccgttgggttctttaaattccgtgggtggtgtagctacggagatcaatgcagtca 2181 Query: 121 att 123 ||| Sbjct: 2182 att 2184
>gb|AY147670.1| Orchis rotundifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 103 bits (52), Expect = 4e-19 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 ||||| |||||| |||||||||| ||||||| || ||| |||||||||| || ||||| Sbjct: 2071 aaaaanacatacagccttggcaag-aacggcgttcggca-aaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | |||||||| |||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtanctaccgagataaatgcagtcaatt 2184
>gb|AY147640.1| Tofieldia glutinosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 103 bits (52), Expect = 4e-19 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||| ||||||||| | ||||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgttggtggcgtanctaccganatcaatgcagtcaatt 2184
>gb|AF525948.1| Taxus brevifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2207 Score = 103 bits (52), Expect = 4e-19 Identities = 105/121 (86%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 3 gttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccac 62 |||| |||| | ||||||||| ||||||| |||| || ||||| | |||||||||| || Sbjct: 2089 gttgaaaaaggacatacaaccctggcaag-aacgacgttcagc-ggaatatatgactcat 2146 Query: 63 gctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaat 122 ||||||||||| ||||||||||||||||| |||||||| || |||||||||||||| ||| Sbjct: 2147 gctcctttaggttctttaaattccgtgggcggcgtagctacagagatcaatgcagtcaat 2206 Query: 123 t 123 | Sbjct: 2207 t 2207
>gb|AF123818.1|AF123818 Cercidiphyllum japonicum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2157 Score = 103 bits (52), Expect = 4e-19 Identities = 83/91 (91%), Gaps = 2/91 (2%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 2069 aaaaagacatacaaccttggcaag-aacggcgttccgcag-aatatatgactcatgctcc 2126 Query: 68 tttaggctctttaaattccgtgggtggcgta 98 |||||| |||||||||||||||||||||||| Sbjct: 2127 tttaggttctttaaattccgtgggtggcgta 2157
>gb|AY147657.1| Xiphidium caeruleum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 101 bits (51), Expect = 2e-18 Identities = 96/109 (88%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 15 catacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcctttaggc 74 |||||| |||||||||| |||| || || |||| ||||||||||||| || |||||||| Sbjct: 2078 catacagccttggcaag-aacgacgttcggcag-aatatatgacccatgcccctttaggt 2135 Query: 75 tctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||||||||||| ||||||||| | ||||| |||||||||||||||| Sbjct: 2136 tctttaaattccgtaggtggcgtanctaccganatcaatgcagttaatt 2184
>gb|AF528942.1| Thuja plicata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 101 bits (51), Expect = 2e-18 Identities = 99/113 (87%), Gaps = 2/113 (1%) Strand = Plus / Plus Query: 3 gttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccac 62 |||| |||||| ||||||||||||||||| |||| || ||||||| |||||||||| || Sbjct: 2066 gttgaaaaaagacatacaaccttggcaag-aacgacgttcagcag-aatatatgactcat 2123 Query: 63 gctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgc 115 ||||||||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 2124 gctcctttaggttctttaaattctgtgggcggtgtagctaccgagattaatgc 2176
>gb|AY147681.1| Muilla maritima photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 99.6 bits (50), Expect = 7e-18 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||| | |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcagc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || || |||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtagggggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147680.1| Smilacina racemosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 99.6 bits (50), Expect = 7e-18 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtanctaccgagatcaatgcagtcaatt 2184
>gb|AY147651.1| Mayaca fluviatilis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 99.6 bits (50), Expect = 7e-18 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||||||||||||||||||||||||||||| || || || |||||||| |||| Sbjct: 2129 cttaggctctttaaattccgtgggtggcgtagctactganataaatgcagtcaatt 2184
>gb|AY147638.1| Butomus umbellatus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 99.6 bits (50), Expect = 7e-18 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggccg-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| |||||||| ||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtgggtggtgtanctaccgagatcaatgcagtcaatt 2184
>gb|AF528928.1| Houttuynia cordata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 99.6 bits (50), Expect = 7e-18 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | | |||||||| || || || Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttccgc-ggagtatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| |||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattccgtgggtggcgtacctaccgagatcaatgcagtcaatt 2184
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 99.6 bits (50), Expect = 7e-18 Identities = 155/190 (81%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || || || ||||||||| | ||||| ||||||||||| || || || | Sbjct: 38384 aatatatgacacatgcaccattaggctctctgaattcggtgggtggcgttgcaacagaaa 38443 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 ||||| | || |||||||| || |||||||| |||||| |||| |||||||| |||||| Sbjct: 38444 tcaattctgtaaattatgtatcacctagaagctggttaacaacatctcatttctttctag 38503 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 ||||||| || || | || ||| |||||||||||||| | || |||| || ||||||| Sbjct: 38504 gattctttttattcattggacatctatggcatgcaggacgggcaagagcagcagcagcag 38563 Query: 229 gttttgaaaa 238 | |||||||| Sbjct: 38564 gatttgaaaa 38573
>gb|AY705183.1| Vanilla cf. barbellata Chase O-591 PsbC (psbC) gene, partial cds; chloroplast Length = 1401 Score = 99.6 bits (50), Expect = 7e-18 Identities = 84/93 (90%), Gaps = 2/93 (2%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||| |||||||||| ||||||| || |||| |||||||||| || ||||| Sbjct: 1311 aaaaagacatacagccttggcaag-aacggcgttcggcag-aatatatgactcatgctcc 1368 Query: 68 tttaggctctttaaattccgtgggtggcgtagc 100 |||||| |||||||||||||||||||||||||| Sbjct: 1369 tttaggttctttaaattccgtgggtggcgtagc 1401
>gb|AY147683.1| Narcissus elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 97.6 bits (49), Expect = 3e-17 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||| |||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacagccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtagctaccgagatcaatgcagtcaatt 2184
>gb|AY147673.1| Xanthorrhoea resinosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 97.6 bits (49), Expect = 3e-17 Identities = 101/116 (87%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggtgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF528919.1| Agathis robusta photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2222 Score = 97.6 bits (49), Expect = 3e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| |||||||| ||||||||||| ||||| ||||||| Sbjct: 2110 aatatatgactcatgctcctttaggttctttaaactccgtgggtggtgtagctaccgaga 2169 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcatttt 161 | ||||| || |||||||| || || | ||||||||||| || ||||||||| Sbjct: 2170 ttaatgcggtgaattatgtatccccccgcagttggttatccacctctcatttt 2222
>gb|AF462407.1| Podocarpus chinensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2198 Score = 97.6 bits (49), Expect = 3e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| | Sbjct: 2110 aatatatgactcacgctcccttaggttctttgaattccgtgggtggcgtagctaccgaaa 2169 Query: 109 tcaatgcagttaattatgtctctcc 133 | ||||| || |||||||||||||| Sbjct: 2170 ttaatgcggtaaattatgtctctcc 2194
>dbj|AB087437.1| Anthoceros formosae chloroplast psbD, psbC mRNA for photosystem II D2 protein, photosystem II 44 kDa protein, complete cds Length = 2442 Score = 97.6 bits (49), Expect = 3e-17 Identities = 193/241 (80%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || |||||||| || ||||| ||||| || ||||| ||||| || || | Sbjct: 2198 aatatatgactcatgctcctttgggttctttgaattctgtaggtggagtagctactgaaa 2257 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | |||||||| || ||||| ||||| | ||||||||| | || ||||||||||| | | Sbjct: 2258 ttaatgcagtaaactatgtttctccccgtagttggttagccacctctcattttgtattgg 2317 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 ||||||| ||||| || || || || ||||| || || ||||| || || |||||||| | Sbjct: 2318 gattcttttttttcgtaggtcacttgtggcacgccgggagagcacgtgcagctgcagctg 2377 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttctttacatgaaccctcttaact 288 | || ||||| || || |||||||||| ||||||||||||| |||| |||||||||| Sbjct: 2378 gattcgaaaaagggattgatcgtgattccgaacctgttctttctatgacacctcttaact 2437 Query: 289 a 289 | Sbjct: 2438 a 2438
>gb|AY147659.1| Asphodelus albus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 95.6 bits (48), Expect = 1e-16 Identities = 95/108 (87%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 16 atacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcctttaggct 75 |||||||||||||||| |||| || || |||| |||||||||| || ||||||||||| | Sbjct: 2079 atacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcctttaggtt 2136 Query: 76 ctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||||||| || ||||| ||||| ||||||||||||||||| |||| Sbjct: 2137 ctttaaattctgtaggtggtgtagctaccgagatcaatgcagtcaatt 2184
>gb|AF462406.1| Metasequoia glyptostroboides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 95.6 bits (48), Expect = 1e-16 Identities = 98/113 (86%), Gaps = 2/113 (1%) Strand = Plus / Plus Query: 3 gttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccac 62 |||| |||||| ||||||||| ||||||| || | || ||||||| |||||||||| || Sbjct: 2066 gttgaaaaaagacatacaaccctggcaagaaa-gacgttcagcag-aatatatgactcat 2123 Query: 63 gctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgc 115 ||||||||||| ||||||||||| |||||||| ||||| |||||||| ||||| Sbjct: 2124 gctcctttaggttctttaaattctgtgggtggtgtagctaccgagattaatgc 2176
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 95.6 bits (48), Expect = 1e-16 Identities = 177/220 (80%) Strand = Plus / Minus Query: 51 tatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatc 110 |||||||| || |||||| |||| ||||| || || |||||||| ||||| ||||| || Sbjct: 53716 tatatgactcatgctcctctaggttctttgaactctgtgggtggggtagccaccgaaatt 53657 Query: 111 aatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctagga 170 |||||||| || ||||| ||||| ||||||||||| | || || ||||| ||| |||| Sbjct: 53656 aatgcagtaaactatgtttctccccgaagttggttagccacctcccatttcgtttcagga 53597 Query: 171 ttcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcaggt 230 || ||||| || || || || ||||||| || || |||||||| || |||||||| || Sbjct: 53596 tttttcttcttcgtaggtcacctatggcacgcggggagagcccgtgcagctgcagccgga 53537 Query: 231 tttgaaaagggaatcgatcgtgatttggaacctgttcttt 270 ||||| || ||||| || |||||||| |||||||| |||| Sbjct: 53536 tttgagaaaggaattgaccgtgattttgaacctgtccttt 53497
>gb|AF528925.1| Cunninghamia lanceolata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 93.7 bits (47), Expect = 4e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| ||||||||||||||||| |||||||| || |||| Sbjct: 2110 aatatatgactcatgctcctttaggttctttaaattccgtgggcggcgtagctacagaga 2169 Query: 109 tcaatgcagttaatt 123 |||||||||| |||| Sbjct: 2170 tcaatgcagtcaatt 2184
>gb|AF235043.1|AF235043 Amborella trichopoda photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 93.7 bits (47), Expect = 4e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || ||||||||||| ||||||||||||||||| |||||||| || |||| Sbjct: 2110 aatatatgactcatgctcctttaggttctttaaattccgtgggcggcgtagctacagaga 2169 Query: 109 tcaatgcagttaatt 123 |||||||||| |||| Sbjct: 2170 tcaatgcagtcaatt 2184
>gb|AY147677.1| Asparagus officinalis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/116 (86%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||| | ||||| ||||||||||| |||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtanctaccgaaatcaatgcagtcaatt 2184
>gb|AY147648.1| Dasypogon hookeri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/116 (86%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| | ||||| || |||| |||||||||| || || || Sbjct: 2071 aaaaagacatacaaccttggcaag-agcggcgttcggcag-aatatatgactcatgcccc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| || |||||||||||||| || ||| | ||||||||||||||||| |||| Sbjct: 2129 tttaggttcgttaaattccgtgggcggtgtanctaccgagatcaatgcagtcaatt 2184
>gb|AY147642.1| Narthecium ossifragum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/109 (86%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || |||| |||||||||| || ||||| Sbjct: 2071 aaaaagacatacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgca 116 |||||| |||||| ||||||||||||| || | ||||| ||||||||| Sbjct: 2129 tttaggttctttannttccgtgggtggcntanctaccgaaatcaatgca 2177
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 91.7 bits (46), Expect = 2e-15 Identities = 178/222 (80%) Strand = Plus / Plus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| || |||||||| || ||||| ||||| || ||||| ||||| || || | Sbjct: 52221 aatatatgactcatgctcctttgggttctttgaattctgtaggtggagtagctactgaaa 52280 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | |||||||| || ||||| ||||| | ||||||||| | || ||||||||||| | | Sbjct: 52281 ttaatgcagtaaactatgtttctccccgtagttggttagccacctctcattttgtattgg 52340 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 ||||||| ||||| || || || || ||||| || || ||||| || || |||||||| | Sbjct: 52341 gattcttttttttcgtaggtcacttgtggcacgccgggagagcacgtgcagctgcagctg 52400 Query: 229 gttttgaaaagggaatcgatcgtgatttggaacctgttcttt 270 | || ||||| || || |||||||||| ||||||||||||| Sbjct: 52401 gattcgaaaaagggattgatcgtgattccgaacctgttcttt 52442
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 91.7 bits (46), Expect = 2e-15 Identities = 154/190 (81%) Strand = Plus / Minus Query: 49 aatatatgacccacgctcctttaggctctttaaattccgtgggtggcgtagcgaccgaga 108 |||||||||| ||||| || |||| ||||| |||||||| ||||| ||||| || || | Sbjct: 145076 aatatatgactcacgcaccactaggttctttgaattccgttggtggtgtagctacagaaa 145017 Query: 109 tcaatgcagttaattatgtctctcctagaagttggttatcaacttctcattttgttctag 168 | ||| ||||||| ||||| ||||||||| ||||||| |||| ||||||| | |||| Sbjct: 145016 ttaattcagttaactatgtatctcctagatcttggttaacaacatctcattccttcctag 144957 Query: 169 gattcttcttttttgtgggccatttatggcatgcaggaagagcccgagctgctgcagcag 228 |||||||| | ||| | || ||| | ||||||||||| ||||| |||||||||| || | Sbjct: 144956 gattcttcctatttattggacatctttggcatgcaggcagagcaagagctgctgctgctg 144897 Query: 229 gttttgaaaa 238 | |||||||| Sbjct: 144896 gatttgaaaa 144887
>gb|AF528943.1| Widdringtonia cedarbergensis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 89.7 bits (45), Expect = 7e-15 Identities = 94/108 (87%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || ||||||| |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcagcag-aatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgc 115 |||||| ||||||||||| ||||| || ||||| |||||||| ||||| Sbjct: 2129 tttaggttctttaaattctgtgggcggtgtagctaccgagattaatgc 2176
>gb|AF528921.1| Mahonia aquifolium photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 89.7 bits (45), Expect = 7e-15 Identities = 104/123 (84%), Gaps = 2/123 (1%) Strand = Plus / Plus Query: 1 aggttgnaaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgaccc 60 |||||| |||||| ||||||||||||||||| ||||||| || ||| |||||||||| | Sbjct: 2064 aggttgaaaaaagacatacaaccttggcaag-aacggcgttctgcan-aatatatgactc 2121 Query: 61 acgctcctttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagtta 120 | || || ||||| ||||||||||| |||||||| ||| | || || ||||||||||| | Sbjct: 2122 atgcgcccttaggttctttaaattcngtgggtggtgtanctactganatcaatgcagtca 2181 Query: 121 att 123 ||| Sbjct: 2182 att 2184
>gb|AF123814.1|AF123814 Asarum canadense photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2164 Score = 89.7 bits (45), Expect = 7e-15 Identities = 92/106 (86%), Gaps = 2/106 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | | |||||||| || ||||| Sbjct: 2061 aaaaagacatacaaccttggcaag-aacgacgttctgc-ggagtatatgactcatgctcc 2118 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaat 113 |||||| ||||||||||| |||||||||||| | |||||||||||| Sbjct: 2119 tttaggttctttaaattctgtgggtggcgtanctaccgagatcaat 2164
>gb|AY147675.1| Allium textile photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 87.7 bits (44), Expect = 3e-14 Identities = 99/116 (85%), Gaps = 2/116 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| |||||||||||||||| |||| || || || | |||||||||| || ||||| Sbjct: 2071 aaaaagatatacaaccttggcaag-aacgacgttcggc-ggaatatatgactcatgctcc 2128 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||| ||||||||||| || ||||||||| | ||||| || ||||||||||||| Sbjct: 2129 tttaggttctttaaattctgtaggtggcgtanctaccganataaatgcagttaatt 2184
>gb|AY147666.1| Hemerocallis littorea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 87.7 bits (44), Expect = 3e-14 Identities = 94/108 (87%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 16 atacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcctttaggct 75 |||||||||||||||| |||| || || |||| |||||||||| || ||||||||||| | Sbjct: 2079 atacaaccttggcaag-aacgacgttcggcag-aatatatgactcatgctcctttaggtt 2136 Query: 76 ctttaaattccgtgggtggcgtagcgaccgagatcaatgcagttaatt 123 |||||||||| || ||||| ||||| || |||||||||||||| |||| Sbjct: 2137 ctttaaattctgtaggtggtgtagctactgagatcaatgcagtcaatt 2184
>gb|AF123819.1|AF123819 Dioscorea bulbifera photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2158 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/106 (86%), Gaps = 2/106 (1%) Strand = Plus / Plus Query: 8 aaaaagncatacaaccttggcaagnaacggcgctcagcagnaatatatgacccacgctcc 67 |||||| ||||||||||||||||| |||| || || || | ||||||||||||| ||||| Sbjct: 2055 aaaaagacatacaaccttggcaag-aacgacgttcggc-ggaatatatgacccatgctcc 2112 Query: 68 tttaggctctttaaattccgtgggtggcgtagcgaccgagatcaat 113 ||||| ||||||||||| ||||||||||| || || ||||||||| Sbjct: 2113 cttaggttctttaaattctgtgggtggcgttgctactgagatcaat 2158 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,906,260 Number of Sequences: 3902068 Number of extensions: 3906260 Number of successful extensions: 93118 Number of sequences better than 10.0: 375 Number of HSP's better than 10.0 without gapping: 380 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92028 Number of HSP's gapped (non-prelim): 897 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
