| Clone Name | basd16p05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CH... | 30 | 2.2 | 2 | WNT11_HUMAN (O96014) Protein Wnt-11 precursor | 28 | 4.9 | 3 | WNT11_COTJA (P51891) Protein Wnt-11 precursor | 28 | 4.9 | 4 | WNT11_CHICK (P49339) Protein Wnt-11 precursor | 28 | 4.9 | 5 | SYV_PYRKO (Q5JGN7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... | 28 | 4.9 | 6 | CLAT_PIG (P13222) Choline O-acetyltransferase (EC 2.3.1.6) (CHOA... | 28 | 8.3 |
|---|
>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)| (Choline acetylase) (ChAT) Length = 748 Score = 29.6 bits (65), Expect = 2.2 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = -1 Query: 232 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLG 86 ASL G L Y+ +L SHS + L + YY LF + L G Sbjct: 236 ASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPG 284
>WNT11_HUMAN (O96014) Protein Wnt-11 precursor| Length = 354 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 138 ALDQ*AITHSLKGGCF*ANLPGCLCTP 58 AL AI+H++ C +LPGC C P Sbjct: 116 ALSAAAISHAIARACTSGDLPGCSCGP 142
>WNT11_COTJA (P51891) Protein Wnt-11 precursor| Length = 354 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 138 ALDQ*AITHSLKGGCF*ANLPGCLCTP 58 AL AI+H++ C +LPGC C P Sbjct: 116 ALSAAAISHTIARACTTGDLPGCSCGP 142
>WNT11_CHICK (P49339) Protein Wnt-11 precursor| Length = 354 Score = 28.5 bits (62), Expect = 4.9 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 138 ALDQ*AITHSLKGGCF*ANLPGCLCTP 58 AL AI+H++ C +LPGC C P Sbjct: 116 ALSAAAISHTIARACTTGDLPGCSCGP 142
>SYV_PYRKO (Q5JGN7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 888 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Frame = -1 Query: 160 PVHLQRKGA---RSVSYYALFKGWLLLGKPPW 74 P L+ +G R+ ++Y +F+ W+L G+ PW Sbjct: 487 PTALRPQGTDIIRTWAFYTIFRTWVLTGEKPW 518
>CLAT_PIG (P13222) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)| (Choline acetylase) (ChAT) Length = 640 Score = 27.7 bits (60), Expect = 8.3 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = -1 Query: 232 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLG 86 A+L G L Y+ +L SHS + L + YY LF + L G Sbjct: 128 ANLISGVLSYKALLDSHSIPIDCAKGQLSGQPLCMKQYYGLFSSYRLPG 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,564,408 Number of Sequences: 219361 Number of extensions: 537964 Number of successful extensions: 1417 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1381 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1417 length of database: 80,573,946 effective HSP length: 54 effective length of database: 68,728,452 effective search space used: 1649482848 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)