ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467417.1| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for ... 141 3e-30
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
4dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
5ref|XM_467418.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.46
6gb|AE010141.1| Pyrococcus furiosus DSM 3638, section 16 of 173 o... 44 0.46
7dbj|AK109259.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.46
8gb|AC162037.2| Mus musculus chromosome 8, clone RP23-35K23, comp... 42 1.8
9gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, com... 42 1.8
10ref|XM_761577.1| Theileria parva strain Muguga chromosome 1 hypo... 42 1.8
11emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4... 42 1.8
12emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on ch... 42 1.8
13gb|BC102200.1| Bos taurus 26S proteasome p40.5 subunit, mRNA (cD... 42 1.8
14gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome... 42 1.8
15gb|BT021056.1| Bos taurus proteasome (prosome, macropain) 26S su... 42 1.8
16emb|AL049775.2|CNS00006 Human chromosome 14 DNA sequence BAC R-4... 42 1.8
17ref|NM_001024532.2| Bos taurus 26S proteasome p40.5 subunit (PSM... 42 1.8
18emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2... 42 1.8
19ref|NM_152818.2| Mus musculus oxysterol binding protein 2 (Osbp2... 40 7.1
20gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome... 40 7.1
21gb|BC058602.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 7.1
22gb|BC031794.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 7.1
23ref|XM_618841.3| PREDICTED: Mus musculus oxysterol binding prote... 40 7.1
24gb|AC122050.3| Mus musculus BAC clone RP24-457L7 from chromosome... 40 7.1
25gb|BC058356.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 7.1
26gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete seq... 40 7.1
27gb|AE017245.1| Mycoplasma synoviae 53, complete genome 40 7.1
28gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Ca... 40 7.1
29emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chro... 40 7.1
30gb|AC154303.2| Mus musculus BAC clone RP23-387F19 from chromosom... 40 7.1
31gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome... 40 7.1
32gb|AC010602.7| Homo sapiens chromosome 5 clone CTB-122H10, compl... 40 7.1
33gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome... 40 7.1
34dbj|AK044598.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 7.1
35gb|BC051185.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 7.1
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
37dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
38gb|AE016754.1| Mus musculus chromosome 10 high-growth region, se... 40 7.1
39gb|AY959245.1| Peperomia caperata clone 9 ty3/gypsy-like retrotr... 40 7.1
40gb|AY107338.1| Zea mays PCO113049 mRNA sequence 40 7.1
41gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, compl... 40 7.1 
>ref|XM_467417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3468

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgagccaactcctgtctatcaggcagcaaataattcttttgatgctgagggtctccctt 60
            |||||||||||||||||||||||| |||  |||| || ||||||||||||| |||||| |
Sbjct: 2456 atgagccaactcctgtctatcaggtagcctataactcatttgatgctgaggatctcccat 2515

                                                                        
Query: 61   ctgacagtggagcaagggggaatgtagaattcgaaaggcttgatatagctgatgatatcc 120
            |||| ||||| |||   | ||||| |||||  |||||||  |||||||| |||||  |||
Sbjct: 2516 ctgagagtggggcatttgagaatgaagaatctgaaaggcaagatatagcagatgacgtcc 2575

                                                                   
Query: 121  aaatcgagtcttctgttggagttgcagataattgtatagatgttcatggaactca 175
            | || ||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 2576 agatggagtcttctcttggagttgcagataattgtgtagatattcatggaactca 2630



 Score =  115 bits (58), Expect = 2e-22
 Identities = 151/178 (84%), Gaps = 8/178 (4%)
 Strand = Plus / Plus

                                                                        
Query: 343  ttgaagatgctaaagtagtacttggtgggaattttgatgaaaagaatgatgat---cagg 399
            ||||||||||||||| | ||||||||| |||||| || | ||| || ||||||   ||||
Sbjct: 2822 ttgaagatgctaaagaaatacttggtgagaatttagaagtaaaaaaggatgatggccagg 2881

                                                                        
Query: 400  aagattcagttactgttggtggtacacggaagaggcgctttgctgga-ccagagatcagt 458
             ||||||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 2882 gagattcagttactgtgggtggtacacggaagcggcgctttgctggagccaca-atcagt 2940

                                                                      
Query: 459  gaggaagatgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 516
            ||| ||||||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 2941 gagcaagatgagga---cagtgaagctcattctgaaagtgtttcacttggagggcagc 2995
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>dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein,
            complete cds, contig of clone: OsNMCP1aSE2Nco-5 and
            12FPG031
          Length = 3708

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgagccaactcctgtctatcaggcagcaaataattcttttgatgctgagggtctccctt 60
            |||||||||||||||||||||||| |||  |||| || ||||||||||||| |||||| |
Sbjct: 2456 atgagccaactcctgtctatcaggtagcctataactcatttgatgctgaggatctcccat 2515

                                                                        
Query: 61   ctgacagtggagcaagggggaatgtagaattcgaaaggcttgatatagctgatgatatcc 120
            |||| ||||| |||   | ||||| |||||  |||||||  |||||||| |||||  |||
Sbjct: 2516 ctgagagtggggcatttgagaatgaagaatctgaaaggcaagatatagcagatgacgtcc 2575

                                                                   
Query: 121  aaatcgagtcttctgttggagttgcagataattgtatagatgttcatggaactca 175
            | || ||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 2576 agatggagtcttctcttggagttgcagataattgtgtagatattcatggaactca 2630



 Score =  115 bits (58), Expect = 2e-22
 Identities = 151/178 (84%), Gaps = 8/178 (4%)
 Strand = Plus / Plus

                                                                        
Query: 343  ttgaagatgctaaagtagtacttggtgggaattttgatgaaaagaatgatgat---cagg 399
            ||||||||||||||| | ||||||||| |||||| || | ||| || ||||||   ||||
Sbjct: 2822 ttgaagatgctaaagaaatacttggtgagaatttagaagtaaaaaaggatgatggccagg 2881

                                                                        
Query: 400  aagattcagttactgttggtggtacacggaagaggcgctttgctgga-ccagagatcagt 458
             ||||||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 2882 gagattcagttactgtgggtggtacacggaagcggcgctttgctggagccaca-atcagt 2940

                                                                      
Query: 459  gaggaagatgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 516
            ||| ||||||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 2941 gagcaagatgagga---cagtgaagctcattctgaaagtgtttcacttggagggcagc 2995
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgagccaactcctgtctatcaggcagcaaataattcttttgatgctgagggtctccctt 60
                |||||||||||||||||||||||| |||  |||| || ||||||||||||| |||||| |
Sbjct: 29402484 atgagccaactcctgtctatcaggtagcctataactcatttgatgctgaggatctcccat 29402425

                                                                            
Query: 61       ctgacagtggagcaagggggaatgtagaattcgaaaggcttgatatagctgatgatatcc 120
                |||| ||||| |||   | ||||| |||||  |||||||  |||||||| |||||  |||
Sbjct: 29402424 ctgagagtggggcatttgagaatgaagaatctgaaaggcaagatatagcagatgacgtcc 29402365

                                                                       
Query: 121      aaatcgagtcttctgttggagttgcagataattgtatagatgttcatggaactca 175
                | || ||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 29402364 agatggagtcttctcttggagttgcagataattgtgtagatattcatggaactca 29402310



 Score =  115 bits (58), Expect = 2e-22
 Identities = 151/178 (84%), Gaps = 8/178 (4%)
 Strand = Plus / Minus

                                                                            
Query: 343      ttgaagatgctaaagtagtacttggtgggaattttgatgaaaagaatgatgat---cagg 399
                ||||||||||||||| | ||||||||| |||||| || | ||| || ||||||   ||||
Sbjct: 29402118 ttgaagatgctaaagaaatacttggtgagaatttagaagtaaaaaaggatgatggccagg 29402059

                                                                            
Query: 400      aagattcagttactgttggtggtacacggaagaggcgctttgctgga-ccagagatcagt 458
                 ||||||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 29402058 gagattcagttactgtgggtggtacacggaagcggcgctttgctggagccaca-atcagt 29402000

                                                                          
Query: 459      gaggaagatgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 516
                ||| ||||||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 29401999 gagcaagatgagga---cagtgaagctcattctgaaagtgtttcacttggagggcagc 29401945
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>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_H06
          Length = 139868

 Score =  141 bits (71), Expect = 3e-30
 Identities = 149/175 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1     atgagccaactcctgtctatcaggcagcaaataattcttttgatgctgagggtctccctt 60
             |||||||||||||||||||||||| |||  |||| || ||||||||||||| |||||| |
Sbjct: 53356 atgagccaactcctgtctatcaggtagcctataactcatttgatgctgaggatctcccat 53297

                                                                         
Query: 61    ctgacagtggagcaagggggaatgtagaattcgaaaggcttgatatagctgatgatatcc 120
             |||| ||||| |||   | ||||| |||||  |||||||  |||||||| |||||  |||
Sbjct: 53296 ctgagagtggggcatttgagaatgaagaatctgaaaggcaagatatagcagatgacgtcc 53237

                                                                    
Query: 121   aaatcgagtcttctgttggagttgcagataattgtatagatgttcatggaactca 175
             | || ||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct: 53236 agatggagtcttctcttggagttgcagataattgtgtagatattcatggaactca 53182



 Score =  115 bits (58), Expect = 2e-22
 Identities = 151/178 (84%), Gaps = 8/178 (4%)
 Strand = Plus / Minus

                                                                         
Query: 343   ttgaagatgctaaagtagtacttggtgggaattttgatgaaaagaatgatgat---cagg 399
             ||||||||||||||| | ||||||||| |||||| || | ||| || ||||||   ||||
Sbjct: 52990 ttgaagatgctaaagaaatacttggtgagaatttagaagtaaaaaaggatgatggccagg 52931

                                                                         
Query: 400   aagattcagttactgttggtggtacacggaagaggcgctttgctgga-ccagagatcagt 458
              ||||||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||
Sbjct: 52930 gagattcagttactgtgggtggtacacggaagcggcgctttgctggagccaca-atcagt 52872

                                                                       
Query: 459   gaggaagatgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 516
             ||| ||||||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 52871 gagcaagatgagga---cagtgaagctcattctgaaagtgtttcacttggagggcagc 52817
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>ref|XM_467418.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 567

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 343 ttgaagatgctaaagtagtacttggtgggaattt 376
           ||||||||||||||| | ||||||||| ||||||
Sbjct: 528 ttgaagatgctaaagaaatacttggtgagaattt 561
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>gb|AE010141.1| Pyrococcus furiosus DSM 3638, section 16 of 173 of the complete
            genome
          Length = 12352

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 455  cagtgaggaagatgaagaagtt 476
            ||||||||||||||||||||||
Sbjct: 1866 cagtgaggaagatgaagaagtt 1887
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>dbj|AK109259.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-A11, full
           insert sequence
          Length = 567

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 343 ttgaagatgctaaagtagtacttggtgggaattt 376
           ||||||||||||||| | ||||||||| ||||||
Sbjct: 528 ttgaagatgctaaagaaatacttggtgagaattt 561
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>gb|AC162037.2| Mus musculus chromosome 8, clone RP23-35K23, complete sequence
          Length = 241548

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 339    gtgcttgaagatgctaaagta 359
              |||||||||||||||||||||
Sbjct: 238577 gtgcttgaagatgctaaagta 238557
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>gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, complete sequence
          Length = 202850

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 339    gtgcttgaagatgctaaagta 359
              |||||||||||||||||||||
Sbjct: 162653 gtgcttgaagatgctaaagta 162673
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>ref|XM_761577.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_1149) partial mRNA
          Length = 3339

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 455  cagtgaggaagatgaagaagttagt 479
            |||||| ||||||||||||||||||
Sbjct: 2211 cagtgaagaagatgaagaagttagt 2235
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>emb|CR932961.2| Medicago truncatula chromosome 5 clone mth2-62c4, COMPLETE SEQUENCE
          Length = 119142

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 308    taaaccaagaaggacaaagtc 328
              |||||||||||||||||||||
Sbjct: 104987 taaaccaagaaggacaaagtc 104967
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>emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on chromosome 13 Contains a
              peptidylprolyl isomerase D (cyclophilin D) (Ppid)
              pseudogene and a sperm specific lactate dehydrogenase 3C
              (Ldh3) pseudogene, complete sequence
          Length = 190594

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 306    ggtaaaccaagaaggacaaag 326
              |||||||||||||||||||||
Sbjct: 108059 ggtaaaccaagaaggacaaag 108039
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>gb|BC102200.1| Bos taurus 26S proteasome p40.5 subunit, mRNA (cDNA clone
           MGC:127122 IMAGE:7944308), complete cds
          Length = 1676

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 395 tcaggaagattcagttactgt 415
           |||||||||||||||||||||
Sbjct: 893 tcaggaagattcagttactgt 913
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>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    ggtaaaccaagaaggacaaag 326
              |||||||||||||||||||||
Sbjct: 146793 ggtaaaccaagaaggacaaag 146813
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>gb|BT021056.1| Bos taurus proteasome (prosome, macropain) 26S subunit, non-ATPase,
           13 (PSMD13), mRNA, complete cds
          Length = 1569

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 395 tcaggaagattcagttactgt 415
           |||||||||||||||||||||
Sbjct: 850 tcaggaagattcagttactgt 870
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>emb|AL049775.2|CNS00006 Human chromosome 14 DNA sequence BAC R-497E19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181433

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 146   agataattgtatagatgttca 166
             |||||||||||||||||||||
Sbjct: 16750 agataattgtatagatgttca 16770
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>ref|NM_001024532.2| Bos taurus 26S proteasome p40.5 subunit (PSMD13), mRNA
          Length = 1676

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 395 tcaggaagattcagttactgt 415
           |||||||||||||||||||||
Sbjct: 893 tcaggaagattcagttactgt 913
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>emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2128A3 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 103601

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   agataattgtatagatgttca 166
             |||||||||||||||||||||
Sbjct: 10698 agataattgtatagatgttca 10678
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>ref|NM_152818.2| Mus musculus oxysterol binding protein 2 (Osbp2), mRNA
          Length = 4138

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 449  agagatcagtgaggaagatgaaga 472
            ||||| ||||||||||||||||||
Sbjct: 1353 agagaacagtgaggaagatgaaga 1376
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>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence
          Length = 193784

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 52     gtctcccttctgacagtggagcaa 75
              |||||||||||||||||| |||||
Sbjct: 134184 gtctcccttctgacagtgtagcaa 134207
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>gb|BC058602.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           MGC:65555 IMAGE:6467653), complete cds
          Length = 1822

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 agagatcagtgaggaagatgaaga 472
           ||||| ||||||||||||||||||
Sbjct: 316 agagaacagtgaggaagatgaaga 339
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>gb|BC031794.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           MGC:25110 IMAGE:4501119), complete cds
          Length = 3123

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 agagatcagtgaggaagatgaaga 472
           ||||| ||||||||||||||||||
Sbjct: 316 agagaacagtgaggaagatgaaga 339
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>ref|XM_618841.3| PREDICTED: Mus musculus oxysterol binding protein 2, transcript
            variant 2 (Osbp2), mRNA
          Length = 3646

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 449  agagatcagtgaggaagatgaaga 472
            ||||| ||||||||||||||||||
Sbjct: 1347 agagaacagtgaggaagatgaaga 1370
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>gb|AC122050.3| Mus musculus BAC clone RP24-457L7 from chromosome 6, complete sequence
          Length = 179078

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tggagttgcagataattgta 156
              ||||||||||||||||||||
Sbjct: 141745 tggagttgcagataattgta 141764
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>gb|BC058356.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           MGC:66677 IMAGE:5696357), complete cds
          Length = 3281

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 agagatcagtgaggaagatgaaga 472
           ||||| ||||||||||||||||||
Sbjct: 496 agagaacagtgaggaagatgaaga 519
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>gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete sequence
          Length = 116833

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   gaagatgaagaagttagtga 481
             ||||||||||||||||||||
Sbjct: 72633 gaagatgaagaagttagtga 72614
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>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     agcaaataattcttttgatg 45
              ||||||||||||||||||||
Sbjct: 346253 agcaaataattcttttgatg 346272
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>gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 226172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 455   cagtgaggaagatgaagaag 474
             ||||||||||||||||||||
Sbjct: 90653 cagtgaggaagatgaagaag 90672
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>emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chromosome 11 Contains
            the 5' end of the Osbp2 gene for oxysterol binding
            protein 2, a novel pseudogene, two novel genes, the
            Dusp18 gene for dual specificity phosphatase 18 and five
            CpG islands, complete sequence
          Length = 205509

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 449  agagatcagtgaggaagatgaaga 472
            ||||| ||||||||||||||||||
Sbjct: 8199 agagaacagtgaggaagatgaaga 8176
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>gb|AC154303.2| Mus musculus BAC clone RP23-387F19 from chromosome 14, complete sequence
          Length = 199995

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    ttggagttgcagataattgt 155
              ||||||||||||||||||||
Sbjct: 112046 ttggagttgcagataattgt 112065
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>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence
          Length = 230502

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tggagttgcagataattgta 156
              ||||||||||||||||||||
Sbjct: 141914 tggagttgcagataattgta 141895
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>gb|AC010602.7| Homo sapiens chromosome 5 clone CTB-122H10, complete sequence
          Length = 145424

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 183   gctggtgctaatgacatggcagtt 206
             ||||||||| ||||||||||||||
Sbjct: 29509 gctggtgctcatgacatggcagtt 29486
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>gb|AC160131.2| Mus musculus BAC clone RP23-226D9 from chromosome 12, complete sequence
          Length = 202807

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     cttttgatgctgagggtctccctt 60
              |||||||||||| |||||||||||
Sbjct: 100125 cttttgatgctgtgggtctccctt 100102
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>dbj|AK044598.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930026E05 product:oxysterol binding protein 2,
           full insert sequence
          Length = 2701

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 agagatcagtgaggaagatgaaga 472
           ||||| ||||||||||||||||||
Sbjct: 141 agagaacagtgaggaagatgaaga 164
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>gb|BC051185.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           IMAGE:6467654), containing frame-shift errors
          Length = 1810

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 agagatcagtgaggaagatgaaga 472
           ||||| ||||||||||||||||||
Sbjct: 312 agagaacagtgaggaagatgaaga 335
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 479     tgaagcacaatctgaaagtg 498
               ||||||||||||||||||||
Sbjct: 4434455 tgaagcacaatctgaaagtg 4434436
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>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0489A01
          Length = 137174

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   tgaagcacaatctgaaagtg 498
             ||||||||||||||||||||
Sbjct: 94537 tgaagcacaatctgaaagtg 94518
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>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the
              complete sequence
          Length = 303688

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 455    cagtgaggaagatgaagaag 474
              ||||||||||||||||||||
Sbjct: 206065 cagtgaggaagatgaagaag 206046
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>gb|AY959245.1| Peperomia caperata clone 9 ty3/gypsy-like retrotransposon reverse
           transcriptase (RT) gene, partial cds
          Length = 349

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 107 agctgatgatatccaaatcg 126
           ||||||||||||||||||||
Sbjct: 157 agctgatgatatccaaatcg 138
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>gb|AY107338.1| Zea mays PCO113049 mRNA sequence
          Length = 866

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 492 gaaagtgtttcagttggcgggcagcctcgtaagagg 527
           |||||||||||| |||| |||||||  |||||||||
Sbjct: 15  gaaagtgtttcacttggagggcagcgccgtaagagg 50
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>gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, complete sequence
          Length = 183363

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   tggagttgcagataattgta 156
             ||||||||||||||||||||
Sbjct: 24511 tggagttgcagataattgta 24492


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,328,655
Number of Sequences: 3902068
Number of extensions: 5328655
Number of successful extensions: 104132
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103981
Number of HSP's gapped (non-prelim): 143
length of query: 528
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 505
effective length of database: 17,143,297,704
effective search space: 8657365340520
effective search space used: 8657365340520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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