| Clone Name | basd17d16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1122 bits (566), Expect = 0.0 Identities = 576/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119414 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 119355 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119354 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 119296 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119295 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 119236 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119176 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119175 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 119116 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 119056 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118996 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118995 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118936 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118876 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118875 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 118838 Score = 1122 bits (566), Expect = 0.0 Identities = 576/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 95539 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95540 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 95598 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95599 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 95658 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95659 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 95718 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95719 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 95778 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95779 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 95838 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95839 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 95898 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95899 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 95958 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95959 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96018 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96019 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 96056
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119279 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 119220 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119219 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 119161 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119160 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 119101 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119100 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119041 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119040 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118981 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118980 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118921 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118920 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118861 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118860 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118801 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118800 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118741 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118740 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 118703 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95877 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 95936 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95937 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 95995 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95996 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 96055 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96056 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96115 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96116 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96175 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96235 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96236 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96295 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96296 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96355 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96356 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96415 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96416 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 96453
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119279 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 119220 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119219 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 119161 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119160 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 119101 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119100 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119041 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119040 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118981 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118980 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118921 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118920 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118861 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118860 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118801 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118800 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118741 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118740 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 118703 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95877 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 95936 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95937 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 95995 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95996 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 96055 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96056 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96115 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96116 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96175 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96235 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96236 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96295 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96296 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96355 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96356 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96415 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96416 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 96453
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119228 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 119169 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119168 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 119110 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119109 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 119050 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119049 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 118990 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118989 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118930 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118929 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118870 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118869 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118810 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118809 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118750 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118690 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118689 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 118652 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95822 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 95881 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95882 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 95940 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95941 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 96000 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96001 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96060 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96061 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96120 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96121 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96180 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96181 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96240 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96241 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96300 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96301 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96360 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96361 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 96398
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508455 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 31508514 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508515 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 31508573 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508574 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 31508633 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508634 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 31508693 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508694 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 31508753 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508754 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 31508813 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508814 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 31508873 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31508874 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 31508933 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508934 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 31508993 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 31508994 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 31509031 Score = 482 bits (243), Expect = e-133 Identities = 246/247 (99%) Strand = Plus / Minus Query: 332 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 392 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccaga 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 452 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 512 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 572 gttccgc 578 ||||||| Sbjct: 11513077 gttccgc 11513071 Score = 280 bits (141), Expect = 5e-72 Identities = 144/145 (99%) Strand = Plus / Minus Query: 434 ccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 493 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 494 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 554 atgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgc 27320519 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 348 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 407 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 408 taaaggaggtggggg 422 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatcaccagctaaggccc 388 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 304 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84141 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 84082 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84081 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 84023 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84022 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 83963 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83962 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 83903 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83902 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 83843 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83842 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 83783 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83782 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 83723 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 83722 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 83663 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83662 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 83603 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 83602 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 83565
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119248 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 119189 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119188 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 119130 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119129 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 119070 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119069 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119010 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119009 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118950 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118949 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118890 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118889 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118830 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118829 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118770 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118769 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118710 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118709 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 118672 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95870 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 95929 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95930 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 95988 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95989 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 96048 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96049 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96108 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96109 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96168 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96169 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96228 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96288 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96289 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96348 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96349 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96408 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96409 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 96446
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14644 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 14703 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14704 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 14762 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14763 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 14822 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14823 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 14882 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14883 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 14942 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14943 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 15002 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15003 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 15062 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 15063 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 15122 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15123 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 15182 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 15183 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 15220 Score = 1090 bits (550), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 122919 gagtcttcatagggcgattgtcactgcttatggacccgaac-taggtgatctatccatga 122977 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122978 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 123036 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123037 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 123096 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123097 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 123156 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123157 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 123216 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123217 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 123276 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123277 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 123336 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123337 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 123396 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123397 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 123456 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 123457 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 123494
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141452 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 141511 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141512 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 141570 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141571 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 141630 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141631 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141690 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141691 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 141750 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141751 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 141810 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141811 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 141870 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141871 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 141930 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141931 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 141990 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 141991 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 142028
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20879 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 20938 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20939 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 20997 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20998 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 21057 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21058 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 21117 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21118 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 21177 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21178 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 21237 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21238 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 21297 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 21298 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 21357 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21358 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 21417 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 21418 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 21455 Score = 1092 bits (551), Expect = 0.0 Identities = 574/579 (99%), Gaps = 2/579 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44239 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 44180 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44179 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 44121 Query: 121 agcggatgagttgtggttaggggtg-aaatgccactcgaacccagagctagctggttctc 179 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 44120 agcggatgagttgtggttaggggtgtaaatgccactcgaacccagagctagttggttctc 44061 Query: 180 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44060 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 44001 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44000 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 43941 Query: 300 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43940 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 43881 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43880 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 43821 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 43820 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 43761 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43760 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 43701 Query: 540 tgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||||||||||||||||| Sbjct: 43700 tgtgggatgtcaaaatgcatcggtaggggagcgttccgc 43662
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 809 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 750 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 690 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 630 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 570 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 510 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 450 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 449 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 390 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 330 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 329 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 292
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268804 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 9268863 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268864 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 9268922 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268923 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 9268982 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268983 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9269042 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269043 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9269102 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269103 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9269162 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269163 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9269222 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9269223 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9269282 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269283 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9269342 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9269343 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 9269380 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056718 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 9056777 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056778 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 9056836 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056837 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 9056896 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056897 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9056956 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056957 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9057016 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057017 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9057076 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057077 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9057136 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9057137 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9057196 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057197 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9057256 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9057257 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 9057294 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9228304 gagtcttcatagggcgattgtcactgcttatggacccgaacctaggtgatctatccatga 9228363 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228364 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 9228422 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228423 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 9228482 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9228542 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9228602 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228603 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9228662 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228663 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9228722 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9228723 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9228782 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228783 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9228842 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9228843 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 9228880 Score = 1090 bits (550), Expect = 0.0 Identities = 573/578 (99%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 9164893 gagtcttcatagggcgattgtcactgcttatggacccgaac-taggtgatctatccatga 9164951 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164952 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 9165010 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165011 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 9165070 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165071 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9165130 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165131 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9165190 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165191 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9165250 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165251 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9165310 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9165311 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9165370 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165371 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9165430 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9165431 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 9165468
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938789 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 19938848 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938849 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 19938907 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938908 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 19938967 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938968 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 19939027 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939028 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 19939087 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939088 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 19939147 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939148 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 19939207 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19939208 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 19939267 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939268 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 19939327 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 19939328 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 19939365 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387656 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 10387715 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387716 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 10387774 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387775 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 10387834 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10387894 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387895 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10387954 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387955 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10388014 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388015 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10388074 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10388075 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10388134 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388135 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 10388194 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||| ||||||||||| Sbjct: 10388195 gtgggatgtcaaaatgcatcggtaggagagcgttccgc 10388232 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276642 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 10276583 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276582 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 10276524 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276523 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 10276464 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276463 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10276404 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276403 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10276344 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276343 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10276284 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276283 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10276224 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10276223 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10276164 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10276163 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 10276104 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 10276103 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 10276066 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 488 gatcgagcgcccttgcgctgaagatgaacggggctaagc 526 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 257 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 316 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 317 tcggccagtgagacgatgggggataagcttcatcgtcgagag 358 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736106 gaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598971 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 31599030 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599031 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 31599089 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599090 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 31599149 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599150 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 31599209 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599210 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 31599269 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599270 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 31599329 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599330 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 31599389 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 31599390 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 31599449 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599450 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 31599509 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 31599510 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 31599547 Score = 482 bits (243), Expect = e-133 Identities = 246/247 (99%) Strand = Plus / Minus Query: 332 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 392 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccaga 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 452 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 512 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 572 gttccgc 578 ||||||| Sbjct: 11509840 gttccgc 11509834 Score = 280 bits (141), Expect = 5e-72 Identities = 144/145 (99%) Strand = Plus / Minus Query: 434 ccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 493 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 494 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 554 atgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgc 27411842 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 348 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 407 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 408 taaaggaggtggggg 422 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatcaccagctaaggccc 388 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 304 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526287 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 33526346 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526347 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 33526405 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526406 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 33526465 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526466 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 33526525 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526526 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 33526585 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526586 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 33526645 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526646 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 33526705 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 33526706 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 33526765 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526766 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 33526825 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 33526826 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 33526863 Score = 347 bits (175), Expect = 3e-92 Identities = 205/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 341 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 400 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 401 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccac 460 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 461 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 521 ctaagcgatctgccgaagctgtgggatgtcaaaat 555 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 488 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 529 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47254 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 47195 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47194 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 47136 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47135 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 47076 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47075 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 47016 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47015 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 46956 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46955 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 46896 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46895 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 46836 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 46835 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 46776 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46775 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 46716 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 46715 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 46678
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71484 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 71543 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71544 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 71602 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71603 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 71662 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71663 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 71722 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71723 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 71782 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71783 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 71842 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71843 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 71902 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 71903 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 71962 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71963 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 72022 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 72023 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 72060
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123078 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 123019 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123018 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 122960 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122959 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 122900 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122899 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122840 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122839 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 122780 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122779 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 122720 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122719 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 122660 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122659 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 122600 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122599 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 122540 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 122539 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 122502 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99759 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 99818 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99819 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 99877 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99878 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 99937 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99938 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 99997 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99998 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 100057 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100058 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 100117 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100118 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 100177 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100178 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 100237 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100238 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 100297 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 100298 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 100335
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 315 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 374 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 434 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 494 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 554 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 614 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 674 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 675 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 734 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 794 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 795 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 832
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 510 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 569 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 629 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 689 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 749 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 809 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 869 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 870 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 929 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 989 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 990 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 1027
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 381 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 440 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 500 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 560 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 620 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 680 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 740 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 741 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 800 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 860 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 861 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 898
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 512 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 571 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 631 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 691 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 751 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 811 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 871 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 872 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 931 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 991 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 992 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 1029
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 131 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 190 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 250 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 310 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 370 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 430 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 490 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 491 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 550 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 610 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 611 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 648
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 331 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 332 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 390 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 450 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 510 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 570 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 630 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 690 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 691 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 750 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 810 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 811 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 848
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 510 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 569 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 629 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 689 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 749 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 809 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 869 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 870 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 929 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 989 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 990 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 1027
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 133 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 192 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 252 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 312 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 372 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 432 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 492 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 493 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 552 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 612 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 613 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 650
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950065 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 19950124 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950125 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 19950183 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950184 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 19950243 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950244 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 19950303 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950304 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 19950363 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950364 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 19950423 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950424 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 19950483 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19950484 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 19950543 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950544 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 19950603 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 19950604 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 19950641 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393695 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 10393754 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393755 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 10393813 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393814 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 10393873 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393874 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10393933 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393934 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10393993 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393994 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10394053 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394054 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10394113 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10394114 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10394173 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394174 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 10394233 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||| ||||||||||| Sbjct: 10394234 gtgggatgtcaaaatgcatcggtaggagagcgttccgc 10394271 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282681 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 10282622 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282621 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 10282563 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282562 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 10282503 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282502 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10282443 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282442 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10282383 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282382 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10282323 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282322 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10282263 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10282262 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10282203 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10282202 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 10282143 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 10282142 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 10282105 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 488 gatcgagcgcccttgcgctgaagatgaacggggctaagc 526 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 257 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 316 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 317 tcggccagtgagacgatgggggataagcttcatcgtcgagag 358 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736057 gaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123795 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 123736 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123735 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 123677 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123676 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 123617 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123616 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 123557 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123556 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 123497 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123496 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 123437 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123436 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 123377 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 123376 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 123317 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123316 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 123257 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 123256 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 123219 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100436 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 100495 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100496 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 100554 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100555 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 100614 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100615 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 100674 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100675 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 100734 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100735 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 100794 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100795 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 100854 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100855 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 100914 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100915 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 100974 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 100975 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 101012
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119222 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 119163 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119162 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 119104 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119103 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 119044 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119043 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 118984 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118983 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118924 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118923 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118864 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118863 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118804 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 118803 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118744 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118743 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118684 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118683 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 118646 Score = 1114 bits (562), Expect = 0.0 Identities = 575/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95817 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 95876 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95877 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 95935 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95936 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 95995 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95996 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96055 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96056 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96115 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96116 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96175 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96235 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96236 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96295 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96296 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96355 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96356 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 96393
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118195 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 118136 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118135 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 118077 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118076 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 118017 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118016 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 117957 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117956 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 117897 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117896 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 117837 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117836 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 117777 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 117776 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 117717 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117716 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 117657 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 117656 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 117619
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94048 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 94107 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94108 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 94166 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94167 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 94226 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94227 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 94286 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94287 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 94346 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94347 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 94406 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94407 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 94466 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 94467 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 94526 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94527 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 94586 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||| ||||||||||| Sbjct: 94587 gtgggatgtcaaaatgcatcggtaggagagcgttccgc 94624
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57967 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 57908 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57907 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 57849 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57848 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 57789 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57788 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 57729 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57728 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 57669 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57668 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 57609 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57608 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 57549 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 57548 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 57489 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 57488 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 57429 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 57428 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 57391
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28112 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 28171 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28172 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 28230 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28231 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 28290 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28291 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 28350 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28351 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 28410 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28411 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 28470 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28471 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 28530 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 28531 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 28590 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28591 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 28650 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||| ||||||||||| Sbjct: 28651 gtgggatgtcaaaatgcatcggtaggagagcgttccgc 28688
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241477 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 9241418 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9241417 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatc 9241359 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241358 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 9241299 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241298 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9241239 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241238 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9241179 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241178 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9241119 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241118 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9241059 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9241058 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9240999 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240998 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9240939 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9240938 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 9240901 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 222 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 281 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 282 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 341 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 342 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 387 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 101 bits (51), Expect = 2e-18 Identities = 89/102 (87%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 376 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 429 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 430 acagccaggaggtttgcccagaagcagccaccctttaaagag 471 ||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 537 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||| |||||| |||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgc 3580244 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 375 accagctaaggcccctaaatgaccgctcagtgataaagga 414 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1106 bits (558), Expect = 0.0 Identities = 574/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52690 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 52631 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 52630 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatc 52572 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52571 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 52512 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52511 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 52452 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52451 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 52392 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52391 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 52332 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52331 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 52272 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52271 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 52212 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52211 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 52152 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 52151 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 52114
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1098 bits (554), Expect = 0.0 Identities = 573/578 (99%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 509 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 510 ccagg-atgaagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatc 568 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 628 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 688 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 748 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 808 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 809 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtggg 868 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 869 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 928 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 988 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 989 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 1026
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123018 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 122959 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122958 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 122900 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122899 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 122840 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122839 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122780 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122779 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 122721 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122720 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 122661 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122660 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 122601 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122600 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 122541 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122540 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 122482 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 122481 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 122444 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99719 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 99778 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99779 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 99837 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99838 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 99897 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99898 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 99957 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99958 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 100016 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100017 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 100076 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100077 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 100136 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 100137 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 100196 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100197 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 100255 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 100256 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 100293
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6072 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 6131 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6132 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 6190 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6191 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 6250 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6251 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 6310 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6311 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 6369 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6370 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 6429 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6430 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 6489 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6490 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 6549 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6550 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 6608 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 6609 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 6646
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 719 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 778 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 838 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 898 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 957 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1017 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1018 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 1077 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1078 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 1137 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 1196 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1197 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 1234
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1003 bits (506), Expect = 0.0 Identities = 561/578 (97%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141459 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 141400 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 141399 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 141341 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141340 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 141281 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141280 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141221 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141220 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 141161 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141160 ataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 141101 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141100 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 141041 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 141040 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 140981 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 140980 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 140921 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 140920 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 140883 Score = 1003 bits (506), Expect = 0.0 Identities = 561/578 (97%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112198 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 112257 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 112258 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 112316 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112317 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 112376 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112377 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 112436 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112437 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 112496 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112497 ataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 112556 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112557 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 112616 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 112617 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 112676 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112677 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 112736 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 112737 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 112774
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 995 bits (502), Expect = 0.0 Identities = 560/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138856 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 138797 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 138796 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 138738 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138737 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 138678 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138677 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138618 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138617 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 138558 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138557 ataacaggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 138498 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138497 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 138438 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 138437 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 138378 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138377 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 138318 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 138317 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 138280 Score = 995 bits (502), Expect = 0.0 Identities = 560/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110241 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 110300 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 110301 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 110359 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110360 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 110419 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110420 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 110479 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110480 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 110539 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110540 ataacaggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 110599 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110600 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 110659 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 110660 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 110719 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110720 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 110779 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 110780 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 110817
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 995 bits (502), Expect = 0.0 Identities = 560/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131019 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 130960 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 130959 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 130901 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130900 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 130841 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130840 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 130781 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130780 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 130721 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130720 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 130661 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130660 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 130601 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 130600 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 130541 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130540 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 130481 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 130480 gtgggatgtaaaaatacatcggtaggggagcgttccgc 130443 Score = 995 bits (502), Expect = 0.0 Identities = 560/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103616 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 103675 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 103676 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 103734 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103735 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 103794 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103795 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 103854 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103855 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 103914 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103915 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 103974 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 103975 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104034 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 104035 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 104094 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104095 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104154 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 104155 gtgggatgtaaaaatacatcggtaggggagcgttccgc 104192
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 995 bits (502), Expect = 0.0 Identities = 560/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 704 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 705 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 763 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 823 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 883 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 884 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 943 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 ataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1003 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1004 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1063 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1064 ggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1123 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1124 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1183 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||| ||||||||||||||||| Sbjct: 1184 gtgggatgtaaaaatgcatccgtaggggagcgttccgc 1221
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 995 bits (502), Expect = 0.0 Identities = 560/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 708 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 709 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 767 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 827 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 887 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 888 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 947 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 948 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1007 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1008 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1067 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1068 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1127 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1128 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1187 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||| ||||||||||||||||||||||| Sbjct: 1188 gtgggatgtaaaaaggcatcggtaggggagcgttccgc 1225
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 993 bits (501), Expect = 0.0 Identities = 560/578 (96%), Gaps = 5/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127215 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 127156 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 127155 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 127097 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127096 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 127037 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127036 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 126977 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 126976 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 126917 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126916 ----caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 126861 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 126860 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 126801 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 126800 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 126741 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 126740 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 126681 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 126680 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 126643 Score = 993 bits (501), Expect = 0.0 Identities = 560/578 (96%), Gaps = 5/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107707 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 107766 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 107767 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 107825 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107826 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 107885 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107886 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107945 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107946 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 108005 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108006 ----caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 108061 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 108062 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 108121 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 108122 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 108181 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 108182 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 108241 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 108242 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 108279
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132127 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 132068 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 132067 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 132009 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132008 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 131949 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131948 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 131889 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131888 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 131829 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131828 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 131769 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 131768 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 131709 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 131708 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 131649 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131648 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 131589 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 131588 gtgggatgtaaaaatacatcggtaggggagcgttccgc 131551 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104751 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 104810 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 104811 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 104869 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104870 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104929 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104930 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104989 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104990 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 105049 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105050 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 105109 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 105110 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 105169 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 105170 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 105229 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105230 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 105289 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 105290 gtgggatgtaaaaatacatcggtaggggagcgttccgc 105327
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135253 gagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 135194 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135193 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135135 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135134 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135075 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135074 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135015 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 135014 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 134955 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134954 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 134895 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134894 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134835 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134834 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134775 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134774 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 134715 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 134714 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 134677 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106653 gagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106712 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106713 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106771 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106772 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106831 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106832 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106891 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 106892 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 106951 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106952 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 107011 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107012 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 107071 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 107072 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107131 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107132 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107191 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 107192 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 107229
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136290 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 136231 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 136230 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 136172 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136171 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 136112 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136111 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 136052 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136051 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135992 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135991 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135932 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135931 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 135872 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 135871 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135812 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135811 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135752 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 135751 gtgggatgtaaaaatacatcggtaggggagcgttccgc 135714 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107267 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 107326 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 107327 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 107385 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107386 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 107445 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107446 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107505 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107506 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107565 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107566 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107625 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107626 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 107685 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 107686 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107745 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107746 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107805 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 107806 gtgggatgtaaaaatacatcggtaggggagcgttccgc 107843
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142231 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 142172 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142171 ccagg-atgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatc 142113 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142112 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctcc 142053 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142052 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141993 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141992 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 141933 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 141932 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagaggg 141873 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 141872 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 141813 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 141812 ggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 141753 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141752 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 141693 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 141692 gtgggatgtaaaaatacatcggtaggggagcgttccgc 141655 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111097 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 111156 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111157 ccagg-atgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatc 111215 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111216 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctcc 111275 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111276 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 111335 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111336 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 111395 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 111396 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagaggg 111455 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 111456 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 111515 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 111516 ggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 111575 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111576 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 111635 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 111636 gtgggatgtaaaaatacatcggtaggggagcgttccgc 111673
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 727 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 728 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 786 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 846 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 906 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 907 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 966 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 ataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1026 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1027 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1086 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1087 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1146 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1147 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1206 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 1207 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 1244
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135944 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 135885 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135884 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135826 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135825 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135766 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135765 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135706 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135705 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135646 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135645 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135586 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135585 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 135526 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 135525 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135466 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135465 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135406 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 135405 gtgggatgtaaaaatacatcggtaggggagcgttccgc 135368 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106481 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106540 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106541 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106599 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106600 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106659 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106660 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106719 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106720 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106779 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106780 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106839 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106840 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106899 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106900 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106959 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106960 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107019 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 107020 gtgggatgtaaaaatacatcggtaggggagcgttccgc 107057
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135532 gagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 135473 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135472 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135414 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135413 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135354 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135353 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135294 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 135293 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 135234 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 135174 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135173 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 135114 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 135113 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135054 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135053 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 134994 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 134993 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 134956 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106875 gagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106934 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106935 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106993 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106994 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 107053 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107054 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107113 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 107114 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 107173 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107174 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 107233 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107234 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 107293 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 107294 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107353 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107354 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107413 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 107414 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 107451
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 987 bits (498), Expect = 0.0 Identities = 560/578 (96%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133574 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 133515 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 133514 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 133456 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133455 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 133396 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133395 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 133336 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133335 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 133276 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133275 atcacaggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 133217 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133216 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 133157 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||| Sbjct: 133156 ggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaata 133097 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133096 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 133037 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 133036 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 132999 Score = 987 bits (498), Expect = 0.0 Identities = 560/578 (96%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104397 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 104456 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 104457 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 104515 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104516 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104575 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104576 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 104635 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104636 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 104695 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104696 atcacaggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 104754 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104755 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104814 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||| Sbjct: 104815 ggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaata 104874 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104875 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104934 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 104935 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 104972
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132120 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 132061 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 132060 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 132002 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132001 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 131942 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131941 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 131882 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131881 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 131822 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131821 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 131762 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 131761 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 131702 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 131701 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 131642 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131641 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 131582 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 131581 gtgggatgtaaaaatacatcggtaggggagcgttccgc 131544 Score = 987 bits (498), Expect = 0.0 Identities = 559/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104749 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 104808 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 104809 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 104867 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104868 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104927 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104928 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104987 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104988 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 105047 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105048 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 105107 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 105108 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 105167 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 105168 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 105227 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105228 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 105287 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 105288 gtgggatgtaaaaatacatcggtaggggagcgttccgc 105325
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 981 bits (495), Expect = 0.0 Identities = 562/583 (96%), Gaps = 6/583 (1%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138937 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 138878 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 138877 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 138819 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138818 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 138759 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138758 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138699 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc---- 296 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138698 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 138639 Query: 297 -aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138638 acaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 138579 Query: 356 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138578 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 138519 Query: 416 gtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcg 475 || |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 138518 gtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 138459 Query: 476 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 535 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 138458 taatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccg 138399 Query: 536 aagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138398 aagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 138356 Score = 981 bits (495), Expect = 0.0 Identities = 562/583 (96%), Gaps = 6/583 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111008 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 111067 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 111068 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 111126 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111127 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 111186 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111187 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 111246 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc---- 296 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111247 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 111306 Query: 297 -aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111307 acaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 111366 Query: 356 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111367 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 111426 Query: 416 gtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcg 475 || |||||||| |||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 111427 gtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 111486 Query: 476 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 535 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 111487 taatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccg 111546 Query: 536 aagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111547 aagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 111589
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135652 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 135593 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135592 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135534 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135533 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135474 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135414 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135413 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135354 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135353 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135294 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 135293 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 135234 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 135233 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135174 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135173 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135114 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 135113 gtgggatgtaaaaatacatcggtaggggagcgttccgc 135076 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106978 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 107037 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 107038 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 107096 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107097 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 107156 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107157 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107216 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107217 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107276 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107277 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107336 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 107337 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 107396 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 107397 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107456 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107457 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107516 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 107517 gtgggatgtaaaaatacatcggtaggggagcgttccgc 107554
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2172 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 2231 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2232 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 2290 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2291 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 2350 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2351 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 2410 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2411 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 2470 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2471 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 2530 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 2531 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 2590 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 2591 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 2650 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2651 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 2710 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 2711 gtgggatgtaaaaatacatcggtaggggagcgttccgc 2748
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 647 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatga 706 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 707 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 765 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 825 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 885 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 886 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 945 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 946 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 1005 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1006 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1065 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1066 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1125 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1126 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1185 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1186 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 1223
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134898 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 134839 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134838 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134780 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134779 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134720 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134719 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134660 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134659 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134600 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134599 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134540 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134539 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134480 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134479 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134420 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134419 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134360 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 134359 gtgggatgtaaaaatacatcggtaggggagcgttccgc 134322 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106138 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106197 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106198 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106256 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106257 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106316 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106376 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106377 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106436 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106437 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106496 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106497 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106556 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106557 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106616 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106617 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106676 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 106677 gtgggatgtaaaaatacatcggtaggggagcgttccgc 106714
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132350 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatga 132291 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 132290 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 132232 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132231 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 132172 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132171 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 132112 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132111 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 132052 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132051 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 131992 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131991 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 131932 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 131931 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 131872 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131871 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 131812 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 131811 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 131774 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104414 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatga 104473 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 104474 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 104532 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104533 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104592 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104593 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104652 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104653 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 104712 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104713 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 104772 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104773 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104832 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 104833 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 104892 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104893 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104952 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 104953 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 104990
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135033 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 134974 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134973 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134915 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134914 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134855 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134854 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134795 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134794 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134735 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134734 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134675 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134674 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134615 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134614 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134555 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134554 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134495 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 134494 gtgggatgtaaaaatacatcggtaggggagcgttccgc 134457 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106310 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106369 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106370 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106428 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106429 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106488 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106548 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106549 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106608 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106609 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106668 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106669 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106728 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106729 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106788 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106789 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106848 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 106849 gtgggatgtaaaaatacatcggtaggggagcgttccgc 106886
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135031 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 134972 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134971 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134913 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134912 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134853 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134852 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134793 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134792 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134733 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134732 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134673 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134672 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134613 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134612 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134553 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134552 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134493 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 134492 gtgggatgtaaaaatacatcggtaggggagcgttccgc 134455 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106307 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106366 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106367 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106425 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106426 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106485 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106486 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106545 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106546 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106605 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106606 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106665 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106666 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106725 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106726 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106785 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106786 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106845 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 106846 gtgggatgtaaaaatacatcggtaggggagcgttccgc 106883
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 134884 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134883 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134825 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134824 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134765 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134764 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134705 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134704 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134645 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134644 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134585 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134584 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134525 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134524 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134465 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134464 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134405 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 134404 gtgggatgtaaaaatacatcggtaggggagcgttccgc 134367 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106185 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106244 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106245 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106303 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106304 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106363 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106364 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106423 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106424 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106483 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106484 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106543 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106544 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106603 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106604 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106663 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106664 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106723 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 106724 gtgggatgtaaaaatacatcggtaggggagcgttccgc 106761
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133311 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatga 133252 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 133251 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 133193 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133192 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 133133 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133132 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 133073 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133072 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 133013 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133012 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 132953 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132952 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 132893 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 132892 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 132833 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132832 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 132773 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 132772 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 132735 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105338 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatga 105397 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 105398 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 105456 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105457 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 105516 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105517 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 105576 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105577 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 105636 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105637 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 105696 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105697 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 105756 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 105757 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 105816 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105817 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 105876 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 105877 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 105914
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135650 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 135591 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135590 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135532 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135531 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135472 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135412 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135411 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135352 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135351 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135292 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 135291 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 135232 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 135231 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135172 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135171 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135112 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 135111 gtgggatgtaaaaatacatcggtaggggagcgttccgc 135074 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106976 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 107035 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 107036 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 107094 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107095 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 107154 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107155 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107214 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107215 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107274 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107275 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107334 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 107335 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 107394 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 107395 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107454 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107455 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107514 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 107515 gtgggatgtaaaaatacatcggtaggggagcgttccgc 107552
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135381 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 135322 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135321 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135263 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135262 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135203 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135202 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135143 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135142 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135083 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135082 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135023 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 135022 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 134963 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134962 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134903 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134902 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 134843 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 134842 gtgggatgtaaaaatacatcggtaggggagcgttccgc 134805 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106757 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106816 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106817 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106875 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106876 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106935 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106936 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106995 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106996 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107055 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107056 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107115 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 107116 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 107175 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 107176 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107235 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107236 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107295 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 107296 gtgggatgtaaaaatacatcggtaggggagcgttccgc 107333
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139061 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 139002 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 139001 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 138943 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138942 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 138883 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138882 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138823 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138822 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 138763 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138762 ataataggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 138703 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138702 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 138643 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 138642 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 138583 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138582 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 138523 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 138522 gtgggatgtaaaaatacatcggtaggggagcgttccgc 138485 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110238 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 110297 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 110298 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 110356 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110357 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 110416 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110417 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 110476 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110477 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 110536 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110537 ataataggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 110596 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110597 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 110656 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 110657 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 110716 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110717 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 110776 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 110777 gtgggatgtaaaaatacatcggtaggggagcgttccgc 110814
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 979 bits (494), Expect = 0.0 Identities = 558/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 804 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 805 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 863 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 864 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 923 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 983 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 984 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 1043 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1044 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 1103 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1104 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 1163 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1164 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1223 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1224 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1283 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 1284 gtgggatgtaaaaatacatcggtaggggagcgttccgc 1321
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 971 bits (490), Expect = 0.0 Identities = 557/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134910 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 134851 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134850 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134792 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134791 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134732 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134731 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134672 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 134671 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaa 134612 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134611 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134552 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134551 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134492 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 134491 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134432 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134431 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134372 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 134371 gtgggatgtaaaaatacatcggtaggggagcgttccgc 134334 Score = 971 bits (490), Expect = 0.0 Identities = 557/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106152 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106211 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106212 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106270 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106271 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106330 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106331 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106390 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 106391 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaa 106450 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106451 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106510 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106511 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106570 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106571 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106630 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106631 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106690 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| ||||| |||||||||||||||||||||| Sbjct: 106691 gtgggatgtaaaaatacatcggtaggggagcgttccgc 106728
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 969 bits (489), Expect = 0.0 Identities = 556/577 (96%), Gaps = 1/577 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131143 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 131084 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 131083 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 131025 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131024 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 130965 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130964 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 130905 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130904 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 130845 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130844 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 130785 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130784 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 130725 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 130724 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 130665 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 130664 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 130605 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccg 577 ||||||||| |||| ||||||||||||||||||||| Sbjct: 130604 gtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 969 bits (489), Expect = 0.0 Identities = 556/577 (96%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102302 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 102361 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 102362 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 102420 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102421 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 102480 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102481 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 102540 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102541 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 102600 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102601 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 102660 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102661 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 102720 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 102721 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 102780 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 102781 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 102840 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccg 577 ||||||||| |||| ||||||||||||||||||||| Sbjct: 102841 gtgggatgtaaaaaaacatcggtaggggagcgttccg 102877
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 955 bits (482), Expect = 0.0 Identities = 495/498 (99%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 512 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 571 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 631 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 691 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 751 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 811 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 871 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 872 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 931 Query: 481 gctcactgatcgagcgcc 498 |||||||||||||||||| Sbjct: 932 gctcactgatcgagcgcc 949
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 955 bits (482), Expect = 0.0 Identities = 555/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131219 gagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 131160 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 131159 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 131101 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131100 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 131041 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131040 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 130981 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130980 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 130921 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130920 ataacaagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 130861 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130860 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 130801 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 130800 ggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 130741 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130740 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 130681 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||| | ||||||||||||||||||||| Sbjct: 130680 gtgggatgtaaaaaagaatcggtaggggagcgttccgc 130643 Score = 955 bits (482), Expect = 0.0 Identities = 555/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104175 gagtcttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 104234 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 104235 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 104293 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104294 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104353 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104354 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 104413 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104414 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 104473 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104474 ataacaagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 104533 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104534 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104593 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 104594 ggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 104653 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104654 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104713 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||| | ||||||||||||||||||||| Sbjct: 104714 gtgggatgtaaaaaagaatcggtaggggagcgttccgc 104751
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 955 bits (482), Expect = 0.0 Identities = 555/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129882 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 129823 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 129822 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 129764 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129763 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 129704 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 129703 ccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcggt 129644 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 129643 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctgaaa 129584 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 129583 ataataagggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagaggg 129524 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 129523 aaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 129464 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 129463 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 129404 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 129403 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 129344 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||| ||||||||||||||||||||| Sbjct: 129343 gtgggatgtaaaaatgaatcggtaggggagcgttccgc 129306 Score = 955 bits (482), Expect = 0.0 Identities = 555/578 (96%), Gaps = 1/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102574 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 102633 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 102634 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 102692 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102693 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 102752 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102753 ccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcggt 102812 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 102813 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctgaaa 102872 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102873 ataataagggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagaggg 102932 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102933 aaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 102992 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 102993 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 103052 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103053 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 103112 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||| ||||||||||||||||||||| Sbjct: 103113 gtgggatgtaaaaatgaatcggtaggggagcgttccgc 103150
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 954 bits (481), Expect = 0.0 Identities = 554/577 (96%), Gaps = 1/577 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 713 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 714 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 772 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 832 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 892 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 893 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 952 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 953 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtccagaggg 1012 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1013 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1072 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||||| Sbjct: 1073 ggtgcagagacagccaggaggtttgcctaaaagcagccacccttgaaagagtgcgtaata 1132 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1133 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaaacgatctgccgaagct 1192 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccg 577 ||||||||| |||| ||||||||||||||||||||| Sbjct: 1193 gtgggatgtaaaaaaacatcggtaggggagcgttccg 1229
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 952 bits (480), Expect = 0.0 Identities = 554/578 (95%), Gaps = 8/578 (1%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134336 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 134277 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134276 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134218 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134217 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134158 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134157 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134098 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 134097 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa 134038 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134037 -------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 133985 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133984 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 133925 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 133924 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 133865 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133864 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 133805 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 133804 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 133767 Score = 952 bits (480), Expect = 0.0 Identities = 554/578 (95%), Gaps = 8/578 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105946 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 106005 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106006 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106064 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106065 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106124 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106125 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106184 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 106185 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa 106244 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106245 -------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 106297 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106298 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106357 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 106358 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106417 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106418 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 106477 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 106478 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 106515
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 948 bits (478), Expect = 0.0 Identities = 555/578 (96%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 1202 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 1203 ccagg-atgaagcttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaatc 1261 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 1321 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 1381 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1382 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 1441 Query: 301 ataacaggggtcaaggtcggccagtgagacgat-gggggataagcttcatcgtcgagagg 359 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1442 ataacaggggtcaaggtcggccagtgagacgatggggggataagcttcatcgtcgagagg 1501 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1502 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtag 1561 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 1562 gggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaat 1621 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1622 agctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagc 1681 Query: 540 tgtgggatgtcaaaatgcatcggtaggggagcgttccg 577 |||||||||| |||| ||||||||||||||||||||| Sbjct: 1682 tgtgggatgtaaaaaaacatcggtaggggagcgttccg 1719
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 944 bits (476), Expect = 0.0 Identities = 516/528 (97%), Gaps = 1/528 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122558 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 122499 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 122498 ccagg-atgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatc 122440 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122439 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 122380 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122379 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122320 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122319 gcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaa 122260 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122259 ataataggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 122200 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122199 aaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtggg 122140 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 122139 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 122080 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 528 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122079 gctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 944 bits (476), Expect = 0.0 Identities = 516/528 (97%), Gaps = 1/528 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825099 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 12825040 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12825039 ccagg-atgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatc 12824981 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824980 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 12824921 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824920 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 12824861 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12824860 gcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaa 12824801 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824800 ataataggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 12824741 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12824740 aaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtggg 12824681 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 12824680 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 12824621 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 528 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824620 gctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 12824573
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 940 bits (474), Expect = 0.0 Identities = 535/554 (96%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 688 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 689 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 747 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 807 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 867 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 868 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 927 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 987 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 988 aaacagcccggatcaccagctaaggcccctaaatgaccgcccagtgataaaggaggtagg 1047 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1048 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1107 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1108 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1167 Query: 541 gtgggatgtcaaaa 554 ||||||||| |||| Sbjct: 1168 gtgggatgtaaaaa 1181
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 936 bits (472), Expect = 0.0 Identities = 557/580 (96%), Gaps = 4/580 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2416 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 2475 Query: 61 ccaggnatgaagcttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaat 119 ||||| ||||||||||| |||||||||| |||| ||||||||||||||||||||||||| Sbjct: 2476 ccagg-atgaagcttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaat 2534 Query: 120 cagcggatgagttgtggttaggggtgaaatg-ccactcgaacccagagctagctggttct 178 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2535 cagcggatgagttgtggttaggggtgaaatggccactcgaacccagagctagctggttct 2594 Query: 179 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2595 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 2654 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 298 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2655 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgactcaa 2714 Query: 299 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 358 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2715 aa-taacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagag 2773 Query: 359 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 418 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2774 ggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggta 2833 Query: 419 ggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaa 478 |||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 2834 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 2893 Query: 479 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 538 |||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2894 tagcscactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaag 2953 Query: 539 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||| ||||| |||||||||||||||||||||| Sbjct: 2954 ctgtgggatgtaaaaatacatcggtaggggagcgttccgc 2993
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 928 bits (468), Expect = 0.0 Identities = 550/576 (95%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 715 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 716 ccagg-atggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 774 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 834 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 894 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 895 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 954 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 955 ataacaggggttaaggtcggccagtgagacaatgggggataagcttcatcgtcgagaggg 1014 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 1015 aaacagcccggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtagg 1074 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| ||||||||| |||||||||| | |||||||||||||| ||||||||||||||| Sbjct: 1075 ggtgcacagacagccacgaggtttgcctataagcagccacccttgaaagagtgcgtaata 1134 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1135 gctcactgatcgagcgctcttgcgcccaagatgaacggggctaaacgatctgccgaagct 1194 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttcc 576 ||||||||| |||||||||||||||||||||||||| Sbjct: 1195 gtgggatgtaaaaatgcatcggtaggggagcgttcc 1230
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 928 bits (468), Expect = 0.0 Identities = 550/576 (95%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 726 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 727 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 785 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 845 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 905 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 906 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 965 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 966 ataacaggggttaaggtcggccagtgagaccatgggggataagcttcatcgtccagaggg 1025 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1026 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1085 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| ||||||||| |||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1086 ggtgcagagacagccaagaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1145 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||| ||||| ||||||| || |||||||||||||||||||||||||||||| Sbjct: 1146 gctcactgatccagcgctcttgcgcccaaaatgaacggggctaagcgatctgccgaagct 1205 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttcc 576 ||||||||| |||||||||| ||||||||||||||| Sbjct: 1206 gtgggatgtaaaaatgcatccgtaggggagcgttcc 1241
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 928 bits (468), Expect = 0.0 Identities = 550/576 (95%), Gaps = 1/576 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 727 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 728 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 786 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 846 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaaagcactgtttcggt 906 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 907 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaaatatgacctcaaa 966 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 967 ataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtccagaggg 1026 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1027 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1086 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| ||||||||| |||||||||| | |||||||||||||| ||||||||||||||| Sbjct: 1087 ggtgcacagacagccaagaggtttgcctaaaagcagccacccttgaaagagtgcgtaata 1146 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1147 actcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1206 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttcc 576 ||||||||| |||||||||| ||||||||||||||| Sbjct: 1207 gtgggatgtaaaaatgcatccgtaggggagcgttcc 1242
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 894 bits (451), Expect = 0.0 Identities = 547/578 (94%), Gaps = 7/578 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 gagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 727 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 728 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 786 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 846 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 906 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gcgggccgcgagagcagtaccaaatcgaggcaaactctgaatactagatatgacc----- 961 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 | |||||||| ||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 962 -tcacaggggttaaggtcggccaatgagacgatgggggataagcttcatcttccagaggg 1020 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1021 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1080 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1081 ggtgcaaagacagccacgaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1140 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||| Sbjct: 1141 gctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaacgatctgccgaagct 1200 Query: 541 gtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||| |||||||||||||||||||||||||||| Sbjct: 1201 gtgggatgtaaaaatgcatcggtaggggagcgttccgc 1238
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 890 bits (449), Expect = 0.0 Identities = 551/585 (94%), Gaps = 15/585 (2%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139712 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 139653 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 139652 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 139594 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139593 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 139534 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139533 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 139474 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 139473 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 139414 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139413 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 139361 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139360 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 139301 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 139300 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 139241 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 139240 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 139181 Query: 541 gtgggat-------gtcaaaatgcatcggtaggggagcgttccgc 578 ||||||| || |||||||||||||||||||||||||||| Sbjct: 139180 gtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgc 139136 Score = 890 bits (449), Expect = 0.0 Identities = 551/585 (94%), Gaps = 15/585 (2%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110348 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 110407 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 110408 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 110466 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110467 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 110526 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110527 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 110586 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 110587 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 110646 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110647 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 110699 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110700 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 110759 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 110760 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 110819 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110820 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 110879 Query: 541 gtgggat-------gtcaaaatgcatcggtaggggagcgttccgc 578 ||||||| || |||||||||||||||||||||||||||| Sbjct: 110880 gtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgc 110924
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 890 bits (449), Expect = 0.0 Identities = 551/580 (95%), Gaps = 5/580 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccat 58 ||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 662 gagtcttcatagggcaattgtcactgcttatggacccgaaccctggggtgatctatccat 721 Query: 59 gaccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 118 ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 722 gaccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 780 Query: 119 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 840 Query: 179 cccc-gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 237 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 cccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 900 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 297 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 901 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccta 960 Query: 298 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 357 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 aaaataacaagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgaga 1020 Query: 358 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 417 |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 1021 gggaaacagccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggt 1080 Query: 418 gggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgta 477 |||||||| |||||||||||||||||| | | |||||||||||||| |||||||||||| Sbjct: 1081 aggggtgcagagacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgta 1139 Query: 478 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 537 |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 1140 atagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagtgatctgccgaa 1199 Query: 538 gctgtgggatgtcaaaatgcatcggtaggggagcgttccg 577 |||||||||||| |||| |||||||||||||||||||||| Sbjct: 1200 gctgtgggatgtaaaaaggcatcggtaggggagcgttccg 1239
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 876 bits (442), Expect = 0.0 Identities = 522/548 (95%), Gaps = 8/548 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 192 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 193 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 251 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 311 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 312 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 371 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 372 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 431 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 484 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 485 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 544 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 545 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 604 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 605 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 664 Query: 541 gtgggatg 548 |||||||| Sbjct: 665 gtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 874 bits (441), Expect = 0.0 Identities = 541/569 (95%), Gaps = 4/569 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177492 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 177551 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 177552 ccagg-atgaagcttgggtgaaactaagtggaggtccga-ccgactgatgttgaagaatc 177609 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 177610 agcgggtgagttgtggttaggggtgaaatgccactcgcacccagagctagctggttctcc 177669 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177670 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcacggtttcggt 177729 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 177730 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 177789 Query: 301 ataacaggggt-caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177790 ataagaggggggcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 177849 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 177850 gaaagagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtag 177909 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 177910 gggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaat 177969 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgat-ctgccgaag 538 |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 177970 agctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatcctgccgaag 178029 Query: 539 ctgtgggatgtcaaaatgcatcggtaggg 567 ||||||||||||||||| |||||| |||| Sbjct: 178030 ctgtgggatgtcaaaatacatcggcaggg 178058 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419055 gaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68305 gaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 383 aggcccctaaatgaccgctcag 404 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 872 bits (440), Expect = 0.0 Identities = 548/580 (94%), Gaps = 3/580 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 650 gagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctatccatga 709 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 710 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 768 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 828 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 888 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 889 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccca 948 Query: 300 aataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 358 ||||||||||| | |||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 949 aataacaggggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaagag 1008 Query: 359 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 418 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1009 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggta 1068 Query: 419 ggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaa 478 || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 1069 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1128 Query: 479 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 538 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 1129 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 1188 Query: 539 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1189 ctgtgggatgtcaaaatacatcggtaggggagcgttccgc 1228
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 864 bits (436), Expect = 0.0 Identities = 541/572 (94%), Gaps = 3/572 (0%) Strand = Plus / Minus Query: 9 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnat 68 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 52030 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-at 51972 Query: 69 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 128 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51971 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 51912 Query: 129 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51911 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 51852 Query: 189 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 248 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 51851 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 51792 Query: 249 cgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacag 307 | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| || Sbjct: 51791 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataatag 51732 Query: 308 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 367 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51731 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 51672 Query: 368 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgca 426 ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 51671 ccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgca 51612 Query: 427 aagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcac 486 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || Sbjct: 51611 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttac 51552 Query: 487 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 546 ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 51551 tgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggga 51492 Query: 547 tgtcaaaatgcatcggtaggggagcgttccgc 578 ||| |||| |||||||||||||||||||||| Sbjct: 51491 tgtaaaaagacatcggtaggggagcgttccgc 51460 Score = 864 bits (436), Expect = 0.0 Identities = 541/572 (94%), Gaps = 3/572 (0%) Strand = Plus / Plus Query: 9 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnat 68 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 37798 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-at 37856 Query: 69 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 128 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 37857 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 37916 Query: 129 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37917 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 37976 Query: 189 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 248 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 37977 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 38036 Query: 249 cgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacag 307 | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| || Sbjct: 38037 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataatag 38096 Query: 308 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 367 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38097 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 38156 Query: 368 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgca 426 ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 38157 ccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgca 38216 Query: 427 aagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcac 486 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || Sbjct: 38217 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttac 38276 Query: 487 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 546 ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 38277 tgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggga 38336 Query: 547 tgtcaaaatgcatcggtaggggagcgttccgc 578 ||| |||| |||||||||||||||||||||| Sbjct: 38337 tgtaaaaagacatcggtaggggagcgttccgc 38368
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 864 bits (436), Expect = 0.0 Identities = 541/572 (94%), Gaps = 3/572 (0%) Strand = Plus / Plus Query: 9 atagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnat 68 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4726 atagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-at 4784 Query: 69 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 128 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4785 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 4844 Query: 129 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4845 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 4904 Query: 189 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 248 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 4905 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccg 4964 Query: 249 cgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataacag 307 | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| || Sbjct: 4965 tgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataatag 5024 Query: 308 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 367 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5025 gggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 5084 Query: 368 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtgca 426 ||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 5085 ccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgca 5144 Query: 427 aagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcac 486 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || Sbjct: 5145 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttac 5204 Query: 487 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 546 ||||||||||| ||||||| ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 5205 tgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggga 5264 Query: 547 tgtcaaaatgcatcggtaggggagcgttccgc 578 ||| |||| |||||||||||||||||||||| Sbjct: 5265 tgtaaaaagacatcggtaggggagcgttccgc 5296
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 844 bits (426), Expect = 0.0 Identities = 535/569 (94%), Gaps = 8/569 (1%) Strand = Plus / Plus Query: 17 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 76 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 663 attgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaagcttt 721 Query: 77 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 136 | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 ggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 781 Query: 137 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 841 Query: 197 cgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 256 ||||||||||||||||||||||||||||||||||||||||| |||||||| | | ||||| Sbjct: 842 cgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcg 901 Query: 257 gtaccaaatcgaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaag 315 |||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| ||| Sbjct: 902 gtaccaaatcgaagcaaactctgaatactagaatatgacctaaaaataacaggggtaaag 961 Query: 316 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 962 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 1021 Query: 376 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 435 ||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 1022 ccagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagcc 1081 Query: 436 aggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 495 |||||||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||| Sbjct: 1082 aggaggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagc 1141 Query: 496 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg------t 549 || ||||||| |||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1142 gctcttgcgccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaat 1201 Query: 550 caaaatgcatcggtaggggagcgttccgc 578 ||||| |||||||||||||||||||||| Sbjct: 1202 aaaaatacatcggtaggggagcgttccgc 1230
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 841 bits (424), Expect = 0.0 Identities = 507/534 (94%), Gaps = 8/534 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 208 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 267 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 268 agcggatgagttgtggttaggggtgaaatgccgctcgaacccagagctagctggttctcc 327 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 328 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 387 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 388 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 447 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 500 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 501 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 560 Query: 421 ggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaata 480 |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 561 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 620 Query: 481 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 534 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 621 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 841 bits (424), Expect = 0.0 Identities = 544/580 (93%), Gaps = 3/580 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 117499 gagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccatga 117440 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 117439 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 117381 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117380 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 117321 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 117320 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 117261 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 117260 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccca 117201 Query: 300 aataacaggggtcaa-ggtcggccagtgagacgatgggggataagcttcatcgtcgagag 358 ||||| ||||| || |||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 117200 aataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagag 117141 Query: 359 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 418 ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 117140 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggta 117081 Query: 419 ggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaa 478 || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 117080 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 117021 Query: 479 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 538 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 117020 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 116961 Query: 539 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||| |||||||||||||||||||||| Sbjct: 116960 ctgtgggatgtcaaaatacatcggtaggggagcgttccgc 116921 Score = 841 bits (424), Expect = 0.0 Identities = 544/580 (93%), Gaps = 3/580 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 90603 gagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccatga 90662 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 90663 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 90721 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90722 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 90781 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 90782 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 90841 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 90842 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccca 90901 Query: 300 aataacaggggtcaa-ggtcggccagtgagacgatgggggataagcttcatcgtcgagag 358 ||||| ||||| || |||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 90902 aataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagag 90961 Query: 359 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 418 ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 90962 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggta 91021 Query: 419 ggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaa 478 || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 91022 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 91081 Query: 479 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 538 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 91082 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 91141 Query: 539 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||| |||||||||||||||||||||| Sbjct: 91142 ctgtgggatgtcaaaatacatcggtaggggagcgttccgc 91181
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 835 bits (421), Expect = 0.0 Identities = 543/579 (93%), Gaps = 6/579 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86913 gagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 86972 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 86973 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 87031 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87032 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 87091 Query: 181 ccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcgg 239 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 87092 ccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcgg 87151 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 | ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 87152 tacgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc--- 87207 Query: 300 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 ||||| |||||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 87208 aataaaaggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagagg 87267 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 87268 ggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtac 87327 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 | |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| Sbjct: 87328 gagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgtaat 87387 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 87388 agctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcgatctgccgaagc 87447 Query: 540 tgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||| |||||||||||||||||||||| Sbjct: 87448 tgtgggatgtcaaaatacatcggtaggggagcgttccgc 87486
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 827 bits (417), Expect = 0.0 Identities = 534/569 (93%), Gaps = 3/569 (0%) Strand = Plus / Plus Query: 12 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaa 71 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 661 gggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccagg-atgaa 719 Query: 72 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 131 ||| || |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 132 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 839 Query: 192 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 250 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 251 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 310 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||| Sbjct: 900 agagcggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacggggg 959 Query: 311 -tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 369 | | |||| ||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 960 ataagggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacagccc 1019 Query: 370 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 429 |||||||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct: 1020 agatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaag 1079 Query: 430 acagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactga 489 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 1080 acagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactga 1139 Query: 490 tcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1140 tcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgt 1199 Query: 550 caaaatgcatcggtaggggagcgttccgc 578 ||||| |||||||||||||||||||||| Sbjct: 1200 caaaaaacatcggtaggggagcgttccgc 1228
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 807 bits (407), Expect = 0.0 Identities = 420/423 (99%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 622 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 681 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 741 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 801 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 861 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 921 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 922 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 981 Query: 421 ggt 423 ||| Sbjct: 982 ggt 984
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 801 bits (404), Expect = 0.0 Identities = 544/585 (92%), Gaps = 8/585 (1%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145909 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 145850 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 145849 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 145791 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 145790 agcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctcc 145731 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 145730 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 145671 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccca 297 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 145670 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 145611 Query: 298 a---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 353 | ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 145610 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 145551 Query: 354 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 413 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 145550 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaagg 145491 Query: 414 aggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtg 473 |||| || ||||| |||||||||||| ||||||| |||||||||||||||| |||||||| Sbjct: 145490 aggtaggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtg 145431 Query: 474 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 533 |||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||||| Sbjct: 145430 cgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgc 145371 Query: 534 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145370 cgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 145326 Score = 801 bits (404), Expect = 0.0 Identities = 544/585 (92%), Gaps = 8/585 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112553 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 112612 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 112613 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 112671 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112672 agcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctcc 112731 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 112732 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 112791 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccca 297 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 112792 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 112851 Query: 298 a---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 353 | ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 112852 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 112911 Query: 354 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 413 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 112912 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaagg 112971 Query: 414 aggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtg 473 |||| || ||||| |||||||||||| ||||||| |||||||||||||||| |||||||| Sbjct: 112972 aggtaggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtg 113031 Query: 474 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 533 |||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||||| Sbjct: 113032 cgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgc 113091 Query: 534 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 113092 cgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 113136
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 793 bits (400), Expect = 0.0 Identities = 538/579 (92%), Gaps = 5/579 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88999 gagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 89058 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 89059 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 89117 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89118 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 89177 Query: 181 ccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcgg 239 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 89178 ccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcgg 89237 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 | ||||| || |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 89238 tacgggccacgagagcggtaccaaatcgaggcaaactctgaatactagat-taccccaat 89296 Query: 300 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 | || ||||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 89297 a--aaagggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagagg 89354 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 89355 ggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtac 89414 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 | |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||| Sbjct: 89415 gagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgtaat 89474 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||| Sbjct: 89475 agctcactgatcgagcgctcgtgcgccgaagatgaacgggactaagcgatctgccgaagc 89534 Query: 540 tgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||| ||||| |||||||||||||||||||||| Sbjct: 89535 tgtgggatgtaaaaatacatcggtaggggagcgttccgc 89573
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 773 bits (390), Expect = 0.0 Identities = 400/402 (99%), Gaps = 1/402 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 507 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 566 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 626 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 686 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 746 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 806 Query: 361 aaacagcccggatcaccagctaaggcccctaaatgaccgctc 402 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 aaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 771 bits (389), Expect = 0.0 Identities = 527/569 (92%), Gaps = 3/569 (0%) Strand = Plus / Plus Query: 12 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaa 71 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 665 gggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atgaa 723 Query: 72 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 131 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 724 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 783 Query: 132 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 843 Query: 192 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 250 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 tgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggctgcg 903 Query: 251 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag-gg 309 |||||||||||||||||||||||||||||||||| |||| ||| | ||||| || | Sbjct: 904 agagcggtaccaaatcgaggcaaactctgaatactggataggactccctaataatagaga 963 Query: 310 gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 369 || | |||| |||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct: 964 gtaagggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacagccc 1023 Query: 370 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 429 ||||||| ||||||||||||||||||||||| |||| |||||||||| || |||||||| Sbjct: 1024 agatcaccggctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaag 1083 Query: 430 acagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactga 489 |||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||| Sbjct: 1084 acagccaggaggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactga 1143 Query: 490 tcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||||| ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 1144 tcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgt 1203 Query: 550 caaaatgcatcggtaggggagcgttccgc 578 |||||| |||||||||||||||||||||| Sbjct: 1204 caaaatacatcggtaggggagcgttccgc 1232
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 749 bits (378), Expect = 0.0 Identities = 530/578 (91%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 127791 gagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatga 127732 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| |||| Sbjct: 127731 ccagg-atgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatc 127673 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127672 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 127613 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| Sbjct: 127612 ccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcgg 127553 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127552 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccg 127493 Query: 300 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 || ||| ||| | |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 127492 aagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagagg 127433 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 | |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 127432 ggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtag 127373 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 | |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 127372 gagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgtaat 127313 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||||| Sbjct: 127312 agctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaagc 127253 Query: 540 tgtgggatgtcaaaatgcatcggtaggggagcgttccg 577 |||| ||||||||| ||||||||||||||||||||| Sbjct: 127252 tgtgagatgtcaaaggacatcggtaggggagcgttccg 127215 Score = 749 bits (378), Expect = 0.0 Identities = 530/578 (91%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95656 gagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatga 95715 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| |||| Sbjct: 95716 ccagg-atgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatc 95774 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95775 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 95834 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| Sbjct: 95835 ccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcgg 95894 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 299 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95895 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccg 95954 Query: 300 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 || ||| ||| | |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 95955 aagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagagg 96014 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 | |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 96015 ggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtag 96074 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 | |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 96075 gagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgtaat 96134 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||||| Sbjct: 96135 agctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaagc 96194 Query: 540 tgtgggatgtcaaaatgcatcggtaggggagcgttccg 577 |||| ||||||||| ||||||||||||||||||||| Sbjct: 96195 tgtgagatgtcaaaggacatcggtaggggagcgttccg 96232
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 745 bits (376), Expect = 0.0 Identities = 386/388 (99%), Gaps = 1/388 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 715 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 774 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 834 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 894 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 954 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1014 Query: 361 aaacagcccggatcaccagctaaggccc 388 |||||||||||||||||||||||||||| Sbjct: 1015 aaacagcccggatcaccagctaaggccc 1042
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 642 bits (324), Expect = 0.0 Identities = 463/508 (91%), Gaps = 1/508 (0%) Strand = Plus / Minus Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 3103 agcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcagcggatgag 3044 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 |||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 3043 ttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccctgaaatgca 2985 Query: 191 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 250 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 2984 ttgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgcgggcaatg 2925 Query: 251 cgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagggg 310 |||| ||||||||| ||||||||||||||||| |||||| || | ||||| ||| ||| Sbjct: 2924 agagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaatcacaaggg 2865 Query: 311 tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccg 370 ||||||||||| |||||||||| | |||||||||||||||||||||||||||||| || | Sbjct: 2864 tcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaaacaacctg 2805 Query: 371 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 430 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2804 gatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaaga 2745 Query: 431 cagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgat 490 ||||||||||||||||| ||||||| |||||||| ||| |||||||||||||||||| || Sbjct: 2744 cagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaat 2685 Query: 491 cgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 550 ||||||| ||||| | |||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 2684 cgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctatgggatgtc 2625 Query: 551 aaaatgcatcggtaggggagcgttccgc 578 ||||||||||| |||||||||||||||| Sbjct: 2624 aaaatgcatcgataggggagcgttccgc 2597 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 12 gggcgattgtcactgcttatggacccgaacct 43 |||| ||| ||||||||||||||||||||||| Sbjct: 3151 gggcaattctcactgcttatggacccgaacct 3120
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 640 bits (323), Expect = e-180 Identities = 496/550 (90%), Gaps = 4/550 (0%) Strand = Plus / Plus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 |||||| ||||||| | ||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct: 654 agtcttcatagggcaaatgtcattgcttatggacccgaacttgggtgatctaaccatgac 713 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 || | ||||| |||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 714 caag-atgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaatca 772 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 |||||||||||||||||||||||||||||||| || |||||| |||||| |||||||||| Sbjct: 773 gcggatgagttgtggttaggggtgaaatgccaatcaaacccaaagctagttggttctccc 832 Query: 182 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 241 ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||| Sbjct: 833 cgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaaagcactgtttcggtt 891 Query: 242 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--caaa 299 |||| ||| |||| ||||||||| |||||||||| |||||||||||||||||| |||| Sbjct: 892 cgggtcgcgagagccgtaccaaattgaggcaaactatgaatactagatatgacctccaaa 951 Query: 300 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 |||||||||| | ||||| | |||||||||| |||||||||||||||||||||||||||| Sbjct: 952 aataacagggataaaggtggaccagtgagaccatgggggataagcttcatcgtcgagagg 1011 Query: 360 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 419 | |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| | Sbjct: 1012 ggaacagcccagatcaccagctaaggcccctaaatgaccgctaagttataaaggaggtag 1071 Query: 420 gggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaat 479 ||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 1072 gggtgcatagacaaccaggaggtttgcctagaagaagccaccctttaaagagtgcgtaat 1131 Query: 480 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 539 |||| ||||||||||||| ||||||| ||| ||||| ||| ||||||| | |||||||| Sbjct: 1132 agctaactgatcgagcgctcttgcgccgaatatgaatgggaataagcgacccgccgaagc 1191 Query: 540 tgtgggatgt 549 |||||||||| Sbjct: 1192 tgtgggatgt 1201
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 640 bits (323), Expect = e-180 Identities = 508/565 (89%), Gaps = 6/565 (1%) Strand = Plus / Minus Query: 19 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 78 |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 138600 tgtcgctgcttatggacccgaacccgggtgatctatccatgaccagg-atgaagcttgga 138542 Query: 79 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 138 | ||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 138541 tagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggtt 138482 Query: 139 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 198 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138481 aggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcg 138422 Query: 199 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 257 |||| ||||||| | | | || | |||||||||||||| |||||||||||||| |||| | Sbjct: 138421 cagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcag 138362 Query: 258 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaag 315 ||||||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| ||| Sbjct: 138361 taccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaag 138302 Query: 316 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 375 |||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 138301 gtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatca 138242 Query: 376 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 435 ||||||||||||||| ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 138241 ccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 138182 Query: 436 aggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 495 |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 138181 gggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagc 138122 Query: 496 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaa 553 || | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | | Sbjct: 138121 gctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaaca 138062 Query: 554 atgcatcggtaggggagcgttccgc 578 || |||||||||||||||||||||| Sbjct: 138061 atacatcggtaggggagcgttccgc 138037 Score = 640 bits (323), Expect = e-180 Identities = 508/565 (89%), Gaps = 6/565 (1%) Strand = Plus / Plus Query: 19 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 78 |||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 83277 tgtcgctgcttatggacccgaacccgggtgatctatccatgaccagg-atgaagcttgga 83335 Query: 79 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 138 | ||| | | ||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 83336 tagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggtt 83395 Query: 139 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 198 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83396 aggggtgaaatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcg 83455 Query: 199 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 257 |||| ||||||| | | | || | |||||||||||||| |||||||||||||| |||| | Sbjct: 83456 cagcggttgactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcag 83515 Query: 258 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaag 315 ||||||| |||||||||||||||||||| | |||| ||| | | | ||| | ||| ||| Sbjct: 83516 taccaaaccgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaag 83575 Query: 316 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 375 |||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 83576 gtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatca 83635 Query: 376 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 435 ||||||||||||||| ||||||||||||||| | |||||||| || |||||||||||||| Sbjct: 83636 ccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagcc 83695 Query: 436 aggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 495 |||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| Sbjct: 83696 gggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagc 83755 Query: 496 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaa 553 || | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | | Sbjct: 83756 gctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaaca 83815 Query: 554 atgcatcggtaggggagcgttccgc 578 || |||||||||||||||||||||| Sbjct: 83816 atacatcggtaggggagcgttccgc 83840
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 626 bits (316), Expect = e-176 Identities = 319/320 (99%) Strand = Plus / Minus Query: 259 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 319 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 379 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 439 aggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 498 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 499 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 559 tcggtaggggagcgttccgc 578 |||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgc 200
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 622 bits (314), Expect = e-175 Identities = 324/326 (99%), Gaps = 1/326 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 266 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 207 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 147 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 87 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 27 Query: 301 ataacaggggtcaaggtcggccagtg 326 |||||||||||||||||||||||||| Sbjct: 26 ataacaggggtcaaggtcggccagtg 1
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 605 bits (305), Expect = e-170 Identities = 354/369 (95%), Gaps = 1/369 (0%) Strand = Plus / Plus Query: 210 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 269 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 270 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 329 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 330 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 390 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccca 449 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| | Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 509 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 510 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 569 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 570 gcgttccgc 578 ||||||||| Sbjct: 676 gcgttccgc 684 Score = 325 bits (164), Expect = 9e-86 Identities = 186/192 (96%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 167 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 168 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 226 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 286 Query: 181 ccgaaatgcgtt 192 |||||||||||| Sbjct: 287 ccgaaatgcgtt 298
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 601 bits (303), Expect = e-168 Identities = 346/359 (96%), Gaps = 1/359 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 364831 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatga 364890 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 364891 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 364949 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364950 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 365009 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365010 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 365069 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 365070 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 365129 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 359 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 365130 ataacaggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 190 bits (96), Expect = 3e-45 Identities = 127/136 (93%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 354 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 413 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 414 aggtgggggtgcaaagacagcc-aggaggtttgcccagaagcagccaccctttaaagagt 472 |||| |||||||| |||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 473 gcgtaatagctcactg 488 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10885 gaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 591 bits (298), Expect = e-165 Identities = 335/346 (96%), Gaps = 1/346 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46905 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 46964 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 46965 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 47023 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47024 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 47083 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47084 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 47143 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 300 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 47144 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 47203 Query: 301 ataacaggggtcaaggtcggccagtgagacgatgggggataagctt 346 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47204 ataacaggggtcaaggtcggccagtgagacgatgggggataagctt 47249
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 591 bits (298), Expect = e-165 Identities = 301/302 (99%) Strand = Plus / Plus Query: 277 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 337 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 397 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcag 456 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 457 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 517 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 577 gc 578 || Sbjct: 301 gc 302
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 710 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 770 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 771 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 830 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 831 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 889 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 890 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 949 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 950 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1009 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1069 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1070 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1129 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 492 bits (248), Expect = e-136 Identities = 460/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 484 bits (244), Expect = e-133 Identities = 459/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| |||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 484 bits (244), Expect = e-133 Identities = 459/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 710 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 711 taagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggt 770 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 771 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 830 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 831 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 889 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 890 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 949 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 950 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1009 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1069 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1070 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1129 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 484 bits (244), Expect = e-133 Identities = 459/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagc 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 484 bits (244), Expect = e-133 Identities = 460/527 (87%), Gaps = 5/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-g 830 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 831 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 889 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 890 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 949 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 950 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1009 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1069 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1070 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1129 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 484 bits (244), Expect = e-133 Identities = 459/527 (87%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 || || ||| ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tt-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 482 bits (243), Expect = e-133 Identities = 246/247 (99%) Strand = Plus / Minus Query: 332 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 392 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccaga 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 452 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 512 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 572 gttccgc 578 ||||||| Sbjct: 63649 gttccgc 63643
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 478 bits (241), Expect = e-131 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4539 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 4598 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 4599 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 4657 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4658 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 4717 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4718 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 4777 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4778 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 5098 tacatcggtaggggagcgttccgc 5121
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 478 bits (241), Expect = e-131 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 708 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 709 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 767 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 827 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 887 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 888 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccgc 1231
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 478 bits (241), Expect = e-131 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150596 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 150537 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 150536 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 150478 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150477 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 150418 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 150417 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 150358 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150357 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 478 bits (241), Expect = e-131 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118070 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 118129 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 118130 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 118188 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118189 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 118248 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118249 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 118308 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118309 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Minus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 150037 tacatcggtaggggagcgttccgc 150014 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 118629 tacatcggtaggggagcgttccgc 118652
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 478 bits (241), Expect = e-131 Identities = 282/293 (96%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 708 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 709 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 767 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 827 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 887 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 888 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccgc 1231
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 476 bits (240), Expect = e-131 Identities = 278/288 (96%), Gaps = 2/288 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115561 gagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 115502 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 115501 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 115443 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115442 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 115383 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 115382 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 115323 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115322 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 476 bits (240), Expect = e-131 Identities = 278/288 (96%), Gaps = 2/288 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86559 gagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 86618 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 86619 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 86677 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86678 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 86737 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86738 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 86797 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86798 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Minus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 115006 tacatcggtaggggagcgttccgc 114983 Score = 381 bits (192), Expect = e-102 Identities = 246/264 (93%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 555 tgcatcggtaggggagcgttccgc 578 | |||||||||||||||||||||| Sbjct: 87114 tacatcggtaggggagcgttccgc 87137
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 474 bits (239), Expect = e-130 Identities = 279/291 (95%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4878 gagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatga 4937 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||| | |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 4938 ccagg-atgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 4996 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4997 agcggatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttctcc 5056 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5057 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 5116 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 291 |||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5117 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 5167 Score = 426 bits (215), Expect = e-116 Identities = 251/263 (95%) Strand = Plus / Plus Query: 316 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 376 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 435 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 436 aggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 495 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 496 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 555 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 556 gcatcggtaggggagcgttccgc 578 | ||||||||||||||||||||| Sbjct: 5422 gaatcggtaggggagcgttccgc 5444
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 474 bits (239), Expect = e-130 Identities = 279/291 (95%), Gaps = 1/291 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23047 gagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatga 22988 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||| | |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 22987 ccagg-atgaagcttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 22929 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 22928 agcggatgagttgtggttagcggtgaaatgccactcgaacccagagctagctggttctcc 22869 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22868 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 22809 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 291 |||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 22808 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 22758 Score = 426 bits (215), Expect = e-116 Identities = 251/263 (95%) Strand = Plus / Minus Query: 316 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 376 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 435 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 436 aggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 495 |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 496 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 555 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 556 gcatcggtaggggagcgttccgc 578 | ||||||||||||||||||||| Sbjct: 22503 gaatcggtaggggagcgttccgc 22481
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 472 bits (238), Expect = e-130 Identities = 241/242 (99%) Strand = Plus / Plus Query: 337 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 397 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcag 456 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 457 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 517 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 577 gc 578 || Sbjct: 241 gc 242
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 468 bits (236), Expect = e-128 Identities = 457/527 (86%), Gaps = 4/527 (0%) Strand = Plus / Plus Query: 25 tgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaac 84 |||||||||||| ||| || |||||||| ||||||||| | ||||| || | |||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaag-atgaaatttagttgaaac 711 Query: 85 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 144 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 taagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggt 771 Query: 145 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 204 |||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | Sbjct: 772 gaaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg 831 Query: 205 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 | | | || ||||||||||||||||| ||||||||| || ||| ||||||||||||| Sbjct: 832 tatccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaa 890 Query: 265 tcgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcc 322 | |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | || Sbjct: 891 ttgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacc 950 Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 || ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 951 agcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagcta 1010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| || Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagt 1070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| Sbjct: 1071 ttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttg 1130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 || ||| ||||||||| || || ||| ||||||| ||||||||| Sbjct: 1131 tgccgaatatgaacgggaataggcaatccaccgaagccgtgggatgt 1177
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 468 bits (236), Expect = e-128 Identities = 282/296 (95%), Gaps = 1/296 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5146 gagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatga 5205 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||| || | |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 5206 ccagg-atgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 5264 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 5265 agcggatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctcc 5324 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5325 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 5384 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 296 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5385 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 428 bits (216), Expect = e-117 Identities = 259/272 (95%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 308 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 366 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 367 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 426 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 427 aagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcac 486 |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 487 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 546 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 547 tgtcaaaatgcatcggtaggggagcgttccgc 578 ||| |||||| ||||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgc 5716
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 468 bits (236), Expect = e-128 Identities = 282/296 (95%), Gaps = 1/296 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5146 gagtcttcatagggctattgtcactgcttatggacccgaacctgggtgatctatccatga 5205 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||| || | |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 5206 ccagg-atgaagtttaggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 5264 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 5265 agcggatgagttgtggttagcggtgaaatgccaatcgaacccagagctagctggttctcc 5324 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5325 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 5384 Query: 241 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 296 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5385 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440 Score = 428 bits (216), Expect = e-117 Identities = 259/272 (95%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 308 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 366 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 367 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 426 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 427 aagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcac 486 |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 487 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 546 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 547 tgtcaaaatgcatcggtaggggagcgttccgc 578 ||| |||||| ||||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgc 5716
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 454 bits (229), Expect = e-124 Identities = 270/281 (96%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 646 agggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg-atga 704 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 705 agcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 764 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 824 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 825 ttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggccgc 884 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagata 290 | |||||||||||||||||||||||||||||||||| |||| Sbjct: 885 gagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 369 bits (186), Expect = 7e-99 Identities = 240/258 (93%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 560 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 561 ggtaggggagcgttccgc 578 |||||||||||||||||| Sbjct: 1195 ggtaggggagcgttccgc 1212
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 442 bits (223), Expect = e-121 Identities = 274/291 (94%) Strand = Plus / Minus Query: 288 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 347 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 348 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 407 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 408 taaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaa 467 |||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 468 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 528 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 350
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 432 bits (218), Expect = e-118 Identities = 249/258 (96%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 236 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 237 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 295 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 355 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 356 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 415 Query: 241 gcgggctgcgcgagcggt 258 |||||| ||| ||||||| Sbjct: 416 gcgggccgcgagagcggt 433
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 426 bits (215), Expect = e-116 Identities = 265/279 (94%), Gaps = 2/279 (0%) Strand = Plus / Plus Query: 12 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaa 71 |||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 144583 gggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccagg-atgaa 144641 Query: 72 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 131 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 144642 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 144701 Query: 132 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144702 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 144761 Query: 192 tgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcg 250 ||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||||| Sbjct: 144762 tgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcg 144821 Query: 251 cgagcggtaccaaatcgaggcaaactctgaatactagat 289 |||||||||||||||||||||||||||||||||||||| Sbjct: 144822 agagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 426 bits (215), Expect = e-116 Identities = 265/279 (94%), Gaps = 2/279 (0%) Strand = Plus / Minus Query: 12 gggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaa 71 |||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 88268 gggcaattgtcaccgcttataaacccgaacctgggtgatctatccatgaccagg-atgaa 88210 Query: 72 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 131 |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 88209 gcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 88150 Query: 132 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88149 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 88090 Query: 192 tgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggctgcg 250 ||||||||||||||||||| || |||||||||||||||||| ||| |||||||||||||| Sbjct: 88089 tgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccggtgcgggctgcg 88030 Query: 251 cgagcggtaccaaatcgaggcaaactctgaatactagat 289 |||||||||||||||||||||||||||||||||||||| Sbjct: 88029 agagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 377 bits (190), Expect = e-101 Identities = 241/258 (93%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 560 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 561 ggtaggggagcgttccgc 578 |||||||||||||||||| Sbjct: 145139 ggtaggggagcgttccgc 145156 Score = 377 bits (190), Expect = e-101 Identities = 241/258 (93%) Strand = Plus / Minus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 560 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 561 ggtaggggagcgttccgc 578 |||||||||||||||||| Sbjct: 87712 ggtaggggagcgttccgc 87695
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 412 bits (208), Expect = e-112 Identities = 236/244 (96%), Gaps = 1/244 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 232 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 233 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 291 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 292 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctctcc 351 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 352 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 411 Query: 241 gcgg 244 |||| Sbjct: 412 gcgg 415
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 396 bits (200), Expect = e-107 Identities = 231/240 (96%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 339 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 399 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagcc 458 ||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 459 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 518 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 519 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 392 bits (198), Expect = e-106 Identities = 274/294 (93%), Gaps = 4/294 (1%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatg 59 ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5898 gagtcttcatagggcaattgtcactgctttatggacccgaacctgggtgatctatccatg 5839 Query: 60 accaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119 |||||| |||||||| ||||||||||||| |||||||||||||||||||||||| | ||| Sbjct: 5838 accagg-atgaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaat 5781 Query: 120 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5780 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 5721 Query: 180 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 238 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 5720 cccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcg 5661 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 || ||| | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5660 gtataggccgtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 339 bits (171), Expect = 6e-90 Identities = 240/263 (91%) Strand = Plus / Minus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 554 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 555 tgcatcggtaggggagcgttccg 577 ||||||||||||||||||||| Sbjct: 5362 aacatcggtaggggagcgttccg 5340
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 387 bits (195), Expect = e-104 Identities = 263/283 (92%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 660 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccagg-atga 718 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 719 agcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 778 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 779 ttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcg 838 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||||| Sbjct: 839 ttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgc 898 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 | |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 899 gaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 254 bits (128), Expect = 3e-64 Identities = 224/256 (87%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 ||||||| ||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 559 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 560 cggtaggggagcgttc 575 |||||||||||||||| Sbjct: 1191 cggtaggggagcgttc 1206
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 387 bits (195), Expect = e-104 Identities = 263/283 (92%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 3694 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccagg-atga 3752 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 3753 agcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 3812 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 3813 ttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcg 3872 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||||| Sbjct: 3873 ttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgc 3932 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 | |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3933 gaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975 Score = 262 bits (132), Expect = 1e-66 Identities = 225/256 (87%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 ||||||| ||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 559 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 560 cggtaggggagcgttc 575 |||||||||||||||| Sbjct: 4225 cggtaggggagcgttc 4240
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 379 bits (191), Expect = e-102 Identities = 262/283 (92%), Gaps = 2/283 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 660 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccagg-atga 718 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| | |||| ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 719 agcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 778 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 779 ttgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcg 838 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||||| ||| | ||| | || |||||||||||||||||||||||||||||||| Sbjct: 839 ttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgc 898 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 | |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 899 gaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 246 bits (124), Expect = 7e-62 Identities = 224/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 ||||||| ||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 559 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 560 cggtaggggagcgttc 575 |||||||||||||||| Sbjct: 1190 cggtaggggagcgttc 1205
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 375 bits (189), Expect = e-100 Identities = 265/288 (92%), Gaps = 2/288 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| Sbjct: 766 gagtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatgg 825 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||| |||| | ||| ||||||||||||||||||||||||| |||| Sbjct: 826 ccaggg-tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatc 884 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 885 agcggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctcc 944 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 945 ccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcgg 1004 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1005 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 355 bits (179), Expect = 1e-94 Identities = 245/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 552 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 553 aatgcatcggtaggggagcgttccgc 578 | ||||||||||||||||||||||| Sbjct: 1303 agggcatcggtaggggagcgttccgc 1328
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 375 bits (189), Expect = e-100 Identities = 265/288 (92%), Gaps = 2/288 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| Sbjct: 649 gagtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatgg 708 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||| |||| | ||| ||||||||||||||||||||||||| |||| Sbjct: 709 ccaggg-tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatc 767 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 768 agcggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctcc 827 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcgg 887 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 888 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 355 bits (179), Expect = 1e-94 Identities = 245/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 552 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 553 aatgcatcggtaggggagcgttccgc 578 | ||||||||||||||||||||||| Sbjct: 1186 agggcatcggtaggggagcgttccgc 1211
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 375 bits (189), Expect = e-100 Identities = 265/288 (92%), Gaps = 2/288 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| Sbjct: 662 gagtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatgg 721 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||| |||| | ||| ||||||||||||||||||||||||| |||| Sbjct: 722 ccaggg-tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatc 780 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 781 agcggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctcc 840 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 239 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 841 ccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcgg 900 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 901 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 355 bits (179), Expect = 1e-94 Identities = 245/266 (92%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 315 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 374 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 375 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 434 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 435 caggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 494 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 495 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 552 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 553 aatgcatcggtaggggagcgttccgc 578 | ||||||||||||||||||||||| Sbjct: 1199 agggcatcggtaggggagcgttccgc 1224
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 367 bits (185), Expect = 3e-98 Identities = 268/293 (91%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||||||| Sbjct: 667 agtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaaccatgac 726 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 |||| ||||| |||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 727 cagg-atgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaatca 785 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 786 gcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttctccc 845 Query: 182 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 241 ||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 846 cgaaatgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcggtg 904 Query: 242 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 294 |||| || |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 905 cgggtctcgagagcggtaccaaattgaggcaaactatgaatactagatatgac 957 Score = 327 bits (165), Expect = 2e-86 Identities = 234/257 (91%), Gaps = 5/257 (1%) Strand = Plus / Plus Query: 319 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 378 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 379 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 438 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 439 aggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 498 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 499 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 558 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 559 tcggtaggggagcgttc 575 ||||||||||||||||| Sbjct: 1235 tcggtaggggagcgttc 1251
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 353 bits (178), Expect = 4e-94 Identities = 255/278 (91%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 660 agggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccagg-atga 718 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 719 agcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 778 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||||| Sbjct: 779 ctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcg 838 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||||| Sbjct: 839 ttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgc 898 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactag 287 | ||||||||||||||||||||||||||||||||||| Sbjct: 899 gaaagcggtaccaaatcgaggcaaactctgaatactag 936 Score = 347 bits (175), Expect = 3e-92 Identities = 238/258 (92%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 557 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 558 atcggtaggggagcgttc 575 |||||||||||||||||| Sbjct: 1193 atcggtaggggagcgttc 1210
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 351 bits (177), Expect = 2e-93 Identities = 195/201 (97%) Strand = Plus / Plus Query: 285 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 344 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 345 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 404 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 405 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctt 464 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 465 taaagagtgcgtaatagctca 485 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 351 bits (177), Expect = 2e-93 Identities = 195/201 (97%) Strand = Plus / Plus Query: 285 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 344 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 345 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 404 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 405 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctt 464 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 465 taaagagtgcgtaatagctca 485 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75046 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 74987 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74986 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 74928 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74927 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 74868 Query: 181 ccgaaatg 188 |||||||| Sbjct: 74867 ccgaaatg 74860 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401458 gaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382492 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 382551 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382552 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 382610 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382611 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 382670 Query: 181 ccgaaatg 188 |||||||| Sbjct: 382671 ccgaaatg 382678 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282961 gaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154269 gaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 349 bits (176), Expect = 6e-93 Identities = 186/188 (98%), Gaps = 1/188 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113137 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 113078 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113077 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 113019 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113018 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 112959 Query: 181 ccgaaatg 188 |||||||| Sbjct: 112958 ccgaaatg 112951 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294092 gaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 349 bits (176), Expect = 6e-93 Identities = 189/192 (98%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367819 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 367760 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367759 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 367701 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367700 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 367641 Query: 181 ccgaaatgcgtt 192 ||||||| |||| Sbjct: 367640 ccgaaattcgtt 367629 Score = 349 bits (176), Expect = 6e-93 Identities = 189/192 (98%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184424 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 184365 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184364 ccagg-atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 184306 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184305 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 184246 Query: 181 ccgaaatgcgtt 192 ||||||| |||| Sbjct: 184245 ccgaaattcgtt 184234 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 450 gaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266927 gaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 gtcgagagggaaacagcccggatc 374 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 347 bits (175), Expect = 3e-92 Identities = 205/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 341 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 400 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 401 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccac 460 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 461 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 521 ctaagcgatctgccgaagctgtgggatgtcaaaat 555 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 347 bits (175), Expect = 3e-92 Identities = 205/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 341 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 400 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 401 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccac 460 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 461 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 521 ctaagcgatctgccgaagctgtgggatgtcaaaat 555 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 337 bits (170), Expect = 2e-89 Identities = 253/278 (91%), Gaps = 2/278 (0%) Strand = Plus / Minus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 124605 agggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccagg-atga 124547 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 124546 agcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 124487 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||||| Sbjct: 124486 ctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcg 124427 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||||| Sbjct: 124426 ttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgc 124367 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactag 287 | ||||||||||||||||| ||||||||||||||||| Sbjct: 124366 gaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 337 bits (170), Expect = 2e-89 Identities = 253/278 (91%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 95261 agggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccagg-atga 95319 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 95320 agcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 95379 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||||| Sbjct: 95380 ctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcg 95439 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 |||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||||| Sbjct: 95440 ttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggctgc 95499 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactag 287 | ||||||||||||||||| ||||||||||||||||| Sbjct: 95500 gaaagcggtaccaaatcgagtcaaactctgaatactag 95537 Score = 333 bits (168), Expect = 4e-88 Identities = 216/232 (93%) Strand = Plus / Minus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 551 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 124081 Score = 333 bits (168), Expect = 4e-88 Identities = 216/232 (93%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 551 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 95785
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 335 bits (169), Expect = 1e-88 Identities = 214/229 (93%) Strand = Plus / Plus Query: 322 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 381 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 382 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 441 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 442 tttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 501 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 502 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 550 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtc 1140 Score = 333 bits (168), Expect = 4e-88 Identities = 250/275 (90%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 19 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 78 |||||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| Sbjct: 623 tgtcactgtttatagacccgaacccgggtgatctatccatggccaggg-tgaaacttggg 681 Query: 79 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 138 |||| | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 682 tgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 741 Query: 139 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 198 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 742 aggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcg 801 Query: 199 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 257 |||| |||| ||||| | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 802 cagcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcgg 861 Query: 258 taccaaatcgaggcaaactctgaatactagatatg 292 |||||||||||||||||||||||||||||| |||| Sbjct: 862 taccaaatcgaggcaaactctgaatactaggtatg 896
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 335 bits (169), Expect = 1e-88 Identities = 255/281 (90%), Gaps = 2/281 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 ||||| |||||||||| |||||||||||||| |||||||||| ||||| ||||| |||| Sbjct: 671 agggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atga 729 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||||| |||||||||| ||||||| ||||||| ||||||||| |||| ||||||||| Sbjct: 730 agcttgggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcggatgag 789 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 790 ctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcg 849 Query: 191 ttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgc 249 ||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 850 ttgaggcgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgc 909 Query: 250 gcgagcggtaccaaatcgaggcaaactctgaatactagata 290 | ||||||||||||||||| ||||||||||||||| |||| Sbjct: 910 gaaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 309 bits (156), Expect = 5e-81 Identities = 231/256 (90%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 562 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 563 taggggagcgttccgc 578 |||||||||||||||| Sbjct: 1207 taggggagcgttccgc 1222
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 331 bits (167), Expect = 1e-87 Identities = 189/195 (96%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 681 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 682 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 740 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 800 Query: 181 ccgaaatgcgttgag 195 ||||||||||||||| Sbjct: 801 ccgaaatgcgttgag 815
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 331 bits (167), Expect = 1e-87 Identities = 170/171 (99%) Strand = Plus / Plus Query: 408 taaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaa 467 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 468 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 528 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 171
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 325 bits (164), Expect = 9e-86 Identities = 191/200 (95%) Strand = Plus / Minus Query: 348 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 407 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 408 taaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaa 467 |||||||||| || ||||| |||||||||||||||||||| |||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 468 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 527 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 528 atctgccgaagctgtgggat 547 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 325 bits (164), Expect = 9e-86 Identities = 238/262 (90%), Gaps = 3/262 (1%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 556 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 557 catcggtaggggagcgttccgc 578 |||||||||||||||||||||| Sbjct: 1155 catcggtaggggagcgttccgc 1176 Score = 305 bits (154), Expect = 9e-80 Identities = 252/282 (89%), Gaps = 2/282 (0%) Strand = Plus / Plus Query: 13 ggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaag 72 ||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 624 ggcgaatgtcactgtttatggacccgaacccgggtgatctatccatggccagg-atgaag 682 Query: 73 cttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagtt 132 |||| |||||| || ||||||||||||||||| ||||||| || || |||||||| | Sbjct: 683 tttgggtgaaaccaaatggaggtccgaaccgactggtgttgaaaaaccaacggatgagct 742 Query: 133 gtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 192 |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 743 gtggataggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgtt 802 Query: 193 gaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgc 251 |||||||||| ||||||| ||| || ||||||||||||||||||||||||||||||| | Sbjct: 803 gaggcgcagcggttgactagactatttaggggtaaagcactgtttcggtgcgggctgtga 862 Query: 252 gagcggtaccaaatcgaggcaaactctgaatactagatatga 293 | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 863 aaacggtaccaaattgatgcaaactctgaatactaaatatga 904
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 319 bits (161), Expect = 6e-84 Identities = 249/276 (90%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 19 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 78 |||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| Sbjct: 1071 tgtcactgtttatggacccgaacccgggtgatctatccatggccaggg-tgaagcttggg 1129 Query: 79 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 138 |||| | ||| |||| |||||||||||| ||||||| || ||||||||||| ||||||| Sbjct: 1130 tgaagccaagtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggtt 1189 Query: 139 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 198 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 1190 aggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcg 1249 Query: 199 cagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 257 |||| |||||| || | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 1250 cagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcgg 1309 Query: 258 taccaaatcgaggcaaactctgaatactagatatga 293 ||||||||||||||||||||||||||||||| |||| Sbjct: 1310 taccaaatcgaggcaaactctgaatactagacatga 1345 Score = 305 bits (154), Expect = 9e-80 Identities = 205/222 (92%) Strand = Plus / Plus Query: 322 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 381 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 382 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 441 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 442 tttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 501 |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 502 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccgc 578 ||||||||||||||||||||| Sbjct: 1601 atcggtaggggagcgttccgc 1621
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 315 bits (159), Expect = 9e-83 Identities = 260/290 (89%), Gaps = 4/290 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||||||||||||||| ||||||| ||| |||||||||| |||||||||| ||||| Sbjct: 649 gagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgatctaaccatgg 707 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||| | ||||||| || || |||||||||||| ||||||||| |||| Sbjct: 708 ccagg-atgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatc 766 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 767 ggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctcc 826 Query: 181 ccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcg 238 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||| Sbjct: 827 ccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcg 886 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 288 |||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 887 gtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936 Score = 266 bits (134), Expect = 7e-68 Identities = 206/230 (89%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 550 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 1181
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 315 bits (159), Expect = 9e-83 Identities = 260/290 (89%), Gaps = 4/290 (1%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||||||||||||||| ||||||| ||| |||||||||| |||||||||| ||||| Sbjct: 115013 gagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgatctaaccatgg 114955 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||| | ||||||| || || |||||||||||| ||||||||| |||| Sbjct: 114954 ccagg-atgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatc 114896 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 114895 ggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctcc 114836 Query: 181 ccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcg 238 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||| Sbjct: 114835 ccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcg 114776 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 288 |||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114775 gtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 315 bits (159), Expect = 9e-83 Identities = 260/290 (89%), Gaps = 4/290 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||||||||||||||| ||||||| ||| |||||||||| |||||||||| ||||| Sbjct: 86975 gagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgatctaaccatgg 87033 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||| | ||||||| || || |||||||||||| ||||||||| |||| Sbjct: 87034 ccagg-atgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatc 87092 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 87093 ggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctcc 87152 Query: 181 ccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcg 238 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||| Sbjct: 87153 ccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcg 87212 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 288 |||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87213 gtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262 Score = 266 bits (134), Expect = 7e-68 Identities = 206/230 (89%) Strand = Plus / Minus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 550 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 114481 Score = 266 bits (134), Expect = 7e-68 Identities = 206/230 (89%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 550 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 87507
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 91 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 150 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 151 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 210 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 211 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 270 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 271 caaactctgaatactagatat 291 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 311 bits (157), Expect = 1e-81 Identities = 249/277 (89%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 10 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatg 69 |||||| |||||||||| |||||||||||||| |||||||||| ||||| ||||| ||| Sbjct: 4708 tagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atg 4766 Query: 70 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 129 |||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||||||| Sbjct: 4767 aagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatga 4826 Query: 130 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 189 | ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 4827 gctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 4886 Query: 190 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 248 |||||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 4887 gttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggcta 4946 Query: 249 cgcgagcggtaccaaatcgaggcaaactctgaatact 285 || || |||||||||||||||||||||||||||||| Sbjct: 4947 cgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 309 bits (156), Expect = 5e-81 Identities = 231/256 (90%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 562 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 563 taggggagcgttccgc 578 |||||||||||||||| Sbjct: 5245 taggggagcgttccgc 5260
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 311 bits (157), Expect = 1e-81 Identities = 249/277 (89%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 10 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatg 69 |||||| |||||||||| |||||||||||||| |||||||||| ||||| ||||| ||| Sbjct: 675 tagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atg 733 Query: 70 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 129 |||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||||||| Sbjct: 734 aagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatga 793 Query: 130 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 189 | ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 794 gctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 853 Query: 190 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 248 |||||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 854 gttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggcta 913 Query: 249 cgcgagcggtaccaaatcgaggcaaactctgaatact 285 || || |||||||||||||||||||||||||||||| Sbjct: 914 cgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 309 bits (156), Expect = 5e-81 Identities = 231/256 (90%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 562 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 563 taggggagcgttccgc 578 |||||||||||||||| Sbjct: 1212 taggggagcgttccgc 1227
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 311 bits (157), Expect = 1e-81 Identities = 249/277 (89%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 10 tagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatg 69 |||||| |||||||||| |||||||||||||| |||||||||| ||||| ||||| ||| Sbjct: 675 tagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccagg-atg 733 Query: 70 aagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatga 129 |||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||||||| Sbjct: 734 aagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcggatga 793 Query: 130 gttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgc 189 | ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 794 gctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgc 853 Query: 190 gttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctg 248 |||||||||||||| || |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 854 gttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgggcta 913 Query: 249 cgcgagcggtaccaaatcgaggcaaactctgaatact 285 || || |||||||||||||||||||||||||||||| Sbjct: 914 cgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 301 bits (152), Expect = 1e-78 Identities = 230/256 (89%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 ||||| ||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 562 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 563 taggggagcgttccgc 578 |||||||||||||||| Sbjct: 1212 taggggagcgttccgc 1227
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 309 bits (156), Expect = 5e-81 Identities = 247/274 (90%), Gaps = 5/274 (1%) Strand = Plus / Plus Query: 18 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 77 |||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||| Sbjct: 670 ttgtcactttttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgg 728 Query: 78 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 137 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 729 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 788 Query: 138 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 197 |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct: 789 taggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggc 848 Query: 198 gcagcagttgac---tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcga 253 ||||| |||||| ||| | |||||||||||||||||||||||||||||||||||| || Sbjct: 849 gcagcggttgacgaatgggctatctaggggtaaagcactgtttcggtgcgggctgcgaga 908 Query: 254 gcggtaccaaatcgaggcaaactctgaatactag 287 |||||||||||||| ||||||| ||||||||| Sbjct: 909 gcggtaccaaatcgtagcaaactaagaatactag 942 Score = 260 bits (131), Expect = 5e-66 Identities = 200/223 (89%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccgc 578 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 303 bits (153), Expect = 3e-79 Identities = 260/291 (89%), Gaps = 6/291 (2%) Strand = Plus / Plus Query: 2 agtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgatctatccatg 59 |||||||||||||||||| |||||| ||||||||||||||| |||||||||| ||||| Sbjct: 716 agtcttaatagggcgattttgtcactttttatggacccgaacccgggtgatctaaccatg 775 Query: 60 accaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 119 |||||| ||||||||||| | |||| ||| || |||||||||||| ||||||||| ||| Sbjct: 776 accagg-atgaagcttgggtaaaaccaagtggaagtccgaaccgaccgatgttgaaaaat 834 Query: 120 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 179 | |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 835 cggcggatgagttgtggttaggggtgaaatgccaatcgaacccggagctagctggttctc 894 Query: 180 cccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggggtaaagcactgttt 236 ||||||||||||||||||||||| ||||| || | ||||||||||||||||||||| Sbjct: 895 cccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggggtaaagcactgttt 954 Query: 237 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 |||||||||||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 955 cggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactag 1005 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 545 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 293 bits (148), Expect = 3e-76 Identities = 246/275 (89%), Gaps = 4/275 (1%) Strand = Plus / Plus Query: 17 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttg 76 ||||||||| |||||||||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccagg-atgaagcttg 858 Query: 77 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 136 | | |||| ||| ||||||||||||||| ||||||||| |||| ||||||||||||||| Sbjct: 859 ggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgg 918 Query: 137 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 196 ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 919 ttaggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgagg 978 Query: 197 cgcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcga 253 |||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| || Sbjct: 979 cgcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgaga 1038 Query: 254 gcggtaccaaatcgaggcaaactctgaatactaga 288 |||||||||||||| ||||||| |||||||||| Sbjct: 1039 gcggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 240 bits (121), Expect = 4e-60 Identities = 199/225 (88%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 545 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 287 bits (145), Expect = 2e-74 Identities = 170/177 (96%), Gaps = 1/177 (0%) Strand = Plus / Plus Query: 402 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaagcagccacc 461 |||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 462 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 521 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 522 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc 176
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 287 bits (145), Expect = 2e-74 Identities = 258/293 (88%), Gaps = 2/293 (0%) Strand = Plus / Plus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 |||||| |||||| | ||||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 642 agtcttcatagggaaaatgtcattgcttgtggacccgaacttgggtgatctaaccatgac 701 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 |||| ||| | |||| | |||||||| | |||| |||||||||||||||||||||||| Sbjct: 702 cagg-atgcaatttggttaaaactaagtgggggtctgaaccgactgatgttgaagaatca 760 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| Sbjct: 761 gcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttcgccc 820 Query: 182 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 241 |||||||| || ||||||||||||| || || ||||||||||||||||| ||||| |||| Sbjct: 821 cgaaatgcatttaggcgcagcagtt-accgggcatctaggggtaaagcattgttttggtg 879 Query: 242 cgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 294 |||| || |||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 880 cgggtcacgagagcggtaccaaattgaggcagactatgaatactagatatgac 932 Score = 188 bits (95), Expect = 1e-44 Identities = 234/279 (83%), Gaps = 6/279 (2%) Strand = Plus / Plus Query: 297 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 356 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 357 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 416 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 417 tgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgcgt 476 | ||||||| ||||| |||||||||||||| ||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 477 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 536 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 537 agctgtgggatgtcaaaatgcatcggtaggggagcgttc 575 ||||||||||||| |||||||||||||||||||| Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttc 1216
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 285 bits (144), Expect = 8e-74 Identities = 237/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgataccaagtgaa 6433 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 6434 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 6493 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 211 | |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 6494 agtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatcta 6553 Query: 212 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 270 | | |||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 6554 gtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtgg 6613 Query: 271 caaactctgaatactagatatgac 294 |||||||||||||||||| ||||| Sbjct: 6614 caaactctgaatactagaaatgac 6637 Score = 123 bits (62), Expect = 7e-25 Identities = 140/166 (84%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactg 488 | || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 285 bits (144), Expect = 8e-74 Identities = 237/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgataccaagtgaa 3496 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 3497 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 3556 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 211 | |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 3557 agtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatcta 3616 Query: 212 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 270 | | |||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 3617 gtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtgg 3676 Query: 271 caaactctgaatactagatatgac 294 |||||||||||||||||| ||||| Sbjct: 3677 caaactctgaatactagaaatgac 3700 Score = 123 bits (62), Expect = 7e-25 Identities = 140/166 (84%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactg 488 | || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 285 bits (144), Expect = 8e-74 Identities = 237/264 (89%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 726 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgataccaagtgaa 784 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 785 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 844 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 211 | |||||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 845 agtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatcta 904 Query: 212 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 270 | | |||||||||||||||||||||||||||||||||| | || ||||||||||||| || Sbjct: 905 gtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtgg 964 Query: 271 caaactctgaatactagatatgac 294 |||||||||||||||||| ||||| Sbjct: 965 caaactctgaatactagaaatgac 988 Score = 123 bits (62), Expect = 7e-25 Identities = 140/166 (84%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactg 488 | || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 283 bits (143), Expect = 3e-73 Identities = 206/227 (90%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 274 bits (138), Expect = 3e-70 Identities = 240/272 (88%), Gaps = 4/272 (1%) Strand = Plus / Plus Query: 20 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 79 |||||| |||||||||||||||| |||||||||| ||||| ||||| ||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggt 738 Query: 80 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 139 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| |||||||| Sbjct: 739 aaaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtta 798 Query: 140 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 199 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 799 ggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgc 858 Query: 200 agcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcg 256 ||| || ||| || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 859 agcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcg 918 Query: 257 gtaccaaatcgaggcaaactctgaatactaga 288 ||||||||||| ||||||| |||||||||| Sbjct: 919 gtaccaaatcgtagcaaactaagaatactaga 950 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccgc 578 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 281 bits (142), Expect = 1e-72 Identities = 256/290 (88%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 |||||||||||||| |||||| ||||||||||||||| |||||||||| ||||||| Sbjct: 800 agtcttaatagggctcaggtcactctttatggacccgaacccgggtgatctaaccatgac 859 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 |||| ||||||||| | | |||| || || |||||||||||| ||||||||| |||| Sbjct: 860 cagg-atgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgttgaaaaatcg 918 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 |||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 919 gcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccc 978 Query: 182 cgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagcactgtttcgg 239 ||||||||||||||||||||| ||| || ||| | |||||||||||||||||||||||| Sbjct: 979 cgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagcactgtttcgg 1038 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 289 ||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1039 tgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 260 bits (131), Expect = 5e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccgc 578 ||||||||||||||||||||| Sbjct: 1410 atcggtaggggagcgttccgc 1430
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 280 bits (141), Expect = 5e-72 Identities = 144/145 (99%) Strand = Plus / Minus Query: 434 ccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 493 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 494 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 554 atgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgc 20726
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 276 bits (139), Expect = 8e-71 Identities = 239/270 (88%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 18 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 77 |||||||| |||| |||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 114764 ttgtcactatttatagacccgaacccgggtgatctaaccatggccaggg-tgaagcttgg 114706 Query: 78 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 137 | |||||||| |||| |||||| || | |||||||| ||| | ||||||||||||||| Sbjct: 114705 gtaaaactaagtggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggt 114646 Query: 138 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 197 |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 114645 taggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggc 114586 Query: 198 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 256 ||||| ||||| | | | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 114585 gcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcg 114526 Query: 257 gtaccaaatcgaggcaaactctgaatacta 286 |||||||||||||||||||||||||||||| Sbjct: 114525 gtaccaaatcgaggcaaactctgaatacta 114496 Score = 276 bits (139), Expect = 8e-71 Identities = 239/270 (88%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 18 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 77 |||||||| |||| |||||||||| |||||||||| ||||| ||||| |||||||||| Sbjct: 2753 ttgtcactatttatagacccgaacccgggtgatctaaccatggccaggg-tgaagcttgg 2811 Query: 78 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 137 | |||||||| |||| |||||| || | |||||||| ||| | ||||||||||||||| Sbjct: 2812 gtaaaactaagtggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggt 2871 Query: 138 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 197 |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 2872 taggggtgaaatgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggc 2931 Query: 198 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 256 ||||| ||||| | | | ||||||||||||||||||||||||||||||||| ||||| Sbjct: 2932 gcagcggttgagattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcg 2991 Query: 257 gtaccaaatcgaggcaaactctgaatacta 286 |||||||||||||||||||||||||||||| Sbjct: 2992 gtaccaaatcgaggcaaactctgaatacta 3021 Score = 194 bits (98), Expect = 2e-46 Identities = 197/230 (85%) Strand = Plus / Minus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| ||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 194 bits (98), Expect = 2e-46 Identities = 197/230 (85%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| ||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 557 catcggtaggggagcgttccg 577 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 catcggtaggggagcgttccg 577 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 268 bits (135), Expect = 2e-68 Identities = 230/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 674 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgacaccaagtgaa 732 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 733 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 792 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 211 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 793 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataag 852 Query: 212 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 271 | | ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 853 gctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggc 912 Query: 272 aaactctgaatactagata 290 ||||||||||||||||||| Sbjct: 913 aaactctgaatactagata 931 Score = 230 bits (116), Expect = 4e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 ||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 268 bits (135), Expect = 2e-68 Identities = 231/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 317 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 376 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 377 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 436 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 437 ggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 496 ||||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 497 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 556 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 557 catcggtaggggagcgttccgc 578 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 228 bits (115), Expect = 2e-56 Identities = 249/291 (85%), Gaps = 7/291 (2%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||| ||||||| ||| |||||||||| |||||||||| ||||| Sbjct: 644 gagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatctaaccatgg 703 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| | ||||||||| |||||| | || |||||||||||| || |||||||| || Sbjct: 704 ccagg-aggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgttgaagagtc 762 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||| ||| |||||| | ||||||||||||||||| Sbjct: 763 ggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagctggttctcc 822 Query: 181 ccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaaagcactgt 234 |||||||||||||||||||||| || || ||| || ||||||||||||||||||| Sbjct: 823 ccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaaagcactgt 882 Query: 235 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 285 |||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 883 ttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 268 bits (135), Expect = 2e-68 Identities = 230/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| ||| || ||| | Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtgacaccaagtgaa 25541 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 25542 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 25601 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctg 211 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 25602 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataag 25661 Query: 212 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 271 | | ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 25662 gctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggc 25721 Query: 272 aaactctgaatactagata 290 ||||||||||||||||||| Sbjct: 25722 aaactctgaatactagata 25740 Score = 230 bits (116), Expect = 4e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 ||||||| ||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 268 bits (135), Expect = 2e-68 Identities = 229/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 189600 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 189658 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 189659 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaa 189718 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 189719 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 189778 Query: 208 actggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 266 | ||| | ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 189779 atgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 189838 Query: 267 gaggcaaactctgaatac 284 |||||||||||||||||| Sbjct: 189839 gaggcaaactctgaatac 189856 Score = 268 bits (135), Expect = 2e-68 Identities = 229/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 151027 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 151085 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 151086 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaa 151145 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 151146 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 151205 Query: 208 actggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 266 | ||| | ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 151206 atgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 151265 Query: 267 gaggcaaactctgaatac 284 |||||||||||||||||| Sbjct: 151266 gaggcaaactctgaatac 151283 Score = 214 bits (108), Expect = 2e-52 Identities = 219/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 560 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 561 ggtaggggagcgttc 575 ||||||||||||||| Sbjct: 190110 ggtaggggagcgttc 190124 Score = 214 bits (108), Expect = 2e-52 Identities = 219/255 (85%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 560 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 561 ggtaggggagcgttc 575 ||||||||||||||| Sbjct: 151537 ggtaggggagcgttc 151551
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 264 bits (133), Expect = 3e-67 Identities = 202/225 (89%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| ||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 212 bits (107), Expect = 1e-51 Identities = 183/207 (88%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||| |||||||||||| ||||| || | |||||||||| |||||||||| ||||| Sbjct: 271 gagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatctaaccatgt 330 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | |||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 331 ccagg-atgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatc 389 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 390 ggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 449 Query: 181 ccgaaatgcgttgaggcgcagcagttg 207 |||||||| ||||||||||||| |||| Sbjct: 450 ccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 280 aatac 284 ||||| Sbjct: 550 aatac 554
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 264 bits (133), Expect = 3e-67 Identities = 249/285 (87%), Gaps = 2/285 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| |||||||||| ||||| |||| |||||||||| |||||||||| ||||| Sbjct: 268 gagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaaccatgt 327 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 328 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 386 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 387 agcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 446 Query: 181 ccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgtttcgg 239 |||||||| ||| ||||||||| || | |||||| ||||||||||||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgtttcgg 506 Query: 240 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 507 tgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 200 bits (101), Expect = 4e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| ||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 264 bits (133), Expect = 3e-67 Identities = 231/262 (88%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 27 cttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaacta 86 ||||||||||||||||||||||||||| ||||||||||| |||||||||| | |||| | Sbjct: 656 cttatggacccgaacctgggtgatctaaccatgaccaggg-tgaagcttgggtaaaacca 714 Query: 87 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 146 || || | ||||||| |||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 715 agtggaagcccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtga 774 Query: 147 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---a 203 ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 775 aatgccaatcgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggtt 834 Query: 204 gttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 263 ||||| || | || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 835 gttgatgggtcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaa 894 Query: 264 atcgaggcaaactctgaatact 285 |||| |||||||| ||||||| Sbjct: 895 atcgtggcaaactaagaatact 916 Score = 186 bits (94), Expect = 5e-44 Identities = 217/258 (84%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 560 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 561 ggtaggggagcgttccgc 578 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 260 bits (131), Expect = 5e-66 Identities = 231/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 188677 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 188735 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | |||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||| Sbjct: 188736 gtggaggtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaa 188795 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 188796 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 188855 Query: 208 a--ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 265 | || | | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 188856 atgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 188914 Query: 266 cgaggcaaactctgaatacta 286 ||||||||||||||||||||| Sbjct: 188915 cgaggcaaactctgaatacta 188935 Score = 252 bits (127), Expect = 1e-63 Identities = 230/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| || ||||||| ||||| ||||| |||||||| | | | ||||| Sbjct: 150234 ttatagacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaa 150292 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||| |||||| |||||||| ||| |||||||||||||||| |||||||||| Sbjct: 150293 gtggaggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaa 150352 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 150353 atgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 150412 Query: 208 a--ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 265 | || | | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150413 atgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150471 Query: 266 cgaggcaaactctgaatacta 286 ||||||||||||||||||||| Sbjct: 150472 cgaggcaaactctgaatacta 150492 Score = 186 bits (94), Expect = 5e-44 Identities = 214/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 |||| ||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 562 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 563 taggggagcgttc 575 ||||||||||||| Sbjct: 189189 taggggagcgttc 189201 Score = 186 bits (94), Expect = 5e-44 Identities = 214/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 323 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 382 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 383 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 442 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 443 ttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 502 |||| ||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 503 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 562 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 563 taggggagcgttc 575 ||||||||||||| Sbjct: 150746 taggggagcgttc 150758
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 258 bits (130), Expect = 2e-65 Identities = 231/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||||| |||||||| ||||||||||| ||||||||||| | |||| || Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccagg-atgaagcttgggtaaaaccaa 745 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 746 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 805 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 806 atgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttg 865 Query: 208 ac--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 | ||| | | | |||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 866 tcgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaa 925 Query: 265 tcgaggcaaactctgaatact 285 ||| ||||||| ||||||| Sbjct: 926 tcgttgcaaactaagaatact 946 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 258 bits (130), Expect = 2e-65 Identities = 231/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||||| |||||||| ||||||||||| ||||||||||| | |||| || Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccagg-atgaagcttgggtaaaaccaa 2483 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2484 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 2543 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2544 atgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttg 2603 Query: 208 ac--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 | ||| | | | |||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 2604 tcgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaa 2663 Query: 265 tcgaggcaaactctgaatact 285 ||| ||||||| ||||||| Sbjct: 2664 tcgttgcaaactaagaatact 2684 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 256 bits (129), Expect = 7e-65 Identities = 229/260 (88%), Gaps = 2/260 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| Sbjct: 2494 ttatagacccgaacccgggtgatctaaccatggccaggg-tgaagcttaggtaaaactaa 2552 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 2553 atggaggcccgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaa 2612 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 207 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2613 atgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 2672 Query: 208 a-ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 266 | | || |||||||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 2673 atgttataatttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatc 2732 Query: 267 gaggcaaactctgaatacta 286 |||||||||||||||||||| Sbjct: 2733 gaggcaaactctgaatacta 2752 Score = 176 bits (89), Expect = 5e-41 Identities = 185/217 (85%) Strand = Plus / Plus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| |||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 513 gaacggggctaagcgatctgccgaagctgtgggatgt 549 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 catcggtaggggagcgttccg 577 ||||||||||||||||||||| Sbjct: 3019 catcggtaggggagcgttccg 3039
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 254 bits (128), Expect = 3e-64 Identities = 200/224 (89%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 216 bits (109), Expect = 6e-53 Identities = 179/201 (89%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 ||||| ||||||||| |||| ||||||||||||||||||| |||||||||| ||||||| Sbjct: 643 agtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatctaaccatgac 702 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 |||| ||||||||| | ||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 703 cagg-atgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgttgaaaaatcg 761 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 || ||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| Sbjct: 762 gctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccc 821 Query: 182 cgaaatgcgttgaggcgcagc 202 ||||||||||||||||||||| Sbjct: 822 cgaaatgcgttgaggcgcagc 842 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 215 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 274 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 275 ctctgaatactagata 290 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 252 bits (127), Expect = 1e-63 Identities = 239/275 (86%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 11 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatga 70 |||||| | |||||| |||| |||||||||| || ||||||| |||| ||||| |||| Sbjct: 2217 agggcgttagtcactatttatagacccgaacccggatgatctagtcatggccagg-atga 2275 Query: 71 agcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgag 130 ||||| | | | ||| || ||||||||||||||||||||||||| |||||||||||||| Sbjct: 2276 agcttaggtaacactgagtggaggtccgaaccgactgatgttgaaaaatcagcggatgag 2335 Query: 131 ttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcg 190 ||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 2336 ttgtgattaggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcg 2395 Query: 191 ttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcg 250 |||||||||||| ||| | | | | ||||||||||||||||||||||||||||||| Sbjct: 2396 ttgaggcgcagcggttaaatttaagcttgggggtaaagcactgtttcggtgcgggctgcg 2455 Query: 251 cgagcggtaccaaatcgaggcaaactctgaatact 285 |||||||||||||||| |||||||||||||||| Sbjct: 2456 aaagcggtaccaaatcgatgcaaactctgaatact 2490 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||||| ||| ||||||||| |||||| || ||||||||||||||||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat 2731
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 91 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 150 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 151 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 210 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 211 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 267 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 268 aggcaaactctgaatactag 287 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 184 bits (93), Expect = 2e-43 Identities = 219/257 (85%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 379 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 500 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 558 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 559 tcggtaggggagcgttc 575 | ||||||||||||||| Sbjct: 1192 tgggtaggggagcgttc 1208 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 19 tgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 65 |||||||| ||||||||||||| | | |||||||| ||||||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagg 710
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 248 bits (125), Expect = 2e-62 Identities = 250/287 (87%), Gaps = 6/287 (2%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 268 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 327 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 328 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 386 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 agcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 181 ccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttc 237 |||||||| ||| ||||||||| || ||| | | |||| | ||||||||||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttc 504 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 505 ggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 222 bits (112), Expect = 1e-54 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccg 577 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 248 bits (125), Expect = 2e-62 Identities = 147/153 (96%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 gagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatga 91 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 92 ccagg-atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 150 Query: 121 agcggatgagttgtggttaggggtgaaatgcca 153 ||||||||||||||||||||||||||||||||| Sbjct: 151 agcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 248 bits (125), Expect = 2e-62 Identities = 227/259 (87%), Gaps = 4/259 (1%) Strand = Plus / Plus Query: 32 ggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcag 91 ||||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| | Sbjct: 658 ggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgg 716 Query: 92 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 151 |||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 717 aggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgc 776 Query: 152 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---ga 208 || |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 777 caatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcga 836 Query: 209 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 268 | || |||||||||||||||||||||||||||||||| || || |||||||||||| Sbjct: 837 cgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgt 896 Query: 269 ggcaaactctgaatactag 287 ||||||| ||||||||| Sbjct: 897 agcaaactaagaatactag 915 Score = 212 bits (107), Expect = 1e-51 Identities = 197/227 (86%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccg 577 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 244 bits (123), Expect = 3e-61 Identities = 226/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 558 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 559 tcggtaggggagcgttccg 577 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 210 bits (106), Expect = 4e-51 Identities = 224/260 (86%), Gaps = 5/260 (1%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| || | |||| ||||| ||||| | | |||||| || Sbjct: 683 gacccgaacccgggtgatctaaccgcggtcagg-atgaaacttgggtaagactaagtgga 741 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 742 ggtccgaaccgaccgatgttgaaaaatcggcggatgaactgtggttaggggtgaaatgcc 801 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gac 209 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 802 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgat 861 Query: 210 tggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 268 | | | |||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 862 taggctgtctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgt 921 Query: 269 ggcaaactctgaatactaga 288 |||||||| |||||||||| Sbjct: 922 agcaaactccgaatactaga 941
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 242 bits (122), Expect = 1e-60 Identities = 197/222 (88%) Strand = Plus / Minus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 542 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 242 bits (122), Expect = 1e-60 Identities = 197/222 (88%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 542 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 170 bits (86), Expect = 3e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | || Sbjct: 170823 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaacaccttgtgga 170765 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 170764 agaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 170705 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 | |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 170704 aatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 170 bits (86), Expect = 3e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | || Sbjct: 122103 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaacaccttgtgga 122161 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 122162 agaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 122221 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 | |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 122222 aatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 279 gaatact 285 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 279 gaatact 285 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 242 bits (122), Expect = 1e-60 Identities = 224/258 (86%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 559 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 560 cggtaggggagcgttccg 577 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 204 bits (103), Expect = 2e-49 Identities = 158/175 (90%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 2378 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 2436 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2437 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 2496 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2497 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 280 aatac 284 ||||| Sbjct: 2630 aatac 2634
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 242 bits (122), Expect = 1e-60 Identities = 197/222 (88%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 542 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 170 bits (86), Expect = 3e-39 Identities = 150/170 (88%), Gaps = 1/170 (0%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | || Sbjct: 694 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaacaccttgtgga 752 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 | |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 753 agaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 812 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 | |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 813 aatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 279 gaatact 285 ||||||| Sbjct: 960 gaatact 966
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 240 bits (121), Expect = 4e-60 Identities = 200/225 (88%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 218 bits (110), Expect = 2e-53 Identities = 180/202 (89%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||| | ||||||| |||| |||||||||| |||||||||| ||||| Sbjct: 269 gagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatctaaccatgt 328 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 329 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 387 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 388 agcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 447 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| |||||||| |||| Sbjct: 448 ccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 280 aatac 284 ||||| Sbjct: 548 aatac 552
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 240 bits (121), Expect = 4e-60 Identities = 249/287 (86%), Gaps = 6/287 (2%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 268 gagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 327 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||||||||||||| |||| Sbjct: 328 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaaaaatc 386 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 agcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 181 ccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcactgtttc 237 |||||||| ||| ||||||||| || ||| | | |||| | ||||||||||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcactgtttc 504 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 505 ggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 206 bits (104), Expect = 6e-50 Identities = 194/224 (86%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 240 bits (121), Expect = 4e-60 Identities = 251/291 (86%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| |||||||||| |||||| |||| |||||||||| |||||||||| ||||| Sbjct: 651 gagtctgaatagggcgac-gtcactttttatagacccgaacccgggtgatctaaccatgg 709 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | | ||| ||||||||||||||| ||||||||| |||| Sbjct: 710 ccagg-atgaagcttgggtaacaacaagtggaggtccgaaccgaccgatgttgaaaaatc 768 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||||||||||||||||| ||| |||||| | ||||||||||||||||| Sbjct: 769 ggcggatgagctgtggttaggggtgaaataccaatcgaactcggagctagctggttctcc 828 Query: 181 ccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttc 237 |||||||||||||||||||||| || ||| || |||||||||||||| ||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggtaaagctctgtttc 888 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 288 ||||||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 889 ggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatactaga 939 Score = 206 bits (104), Expect = 6e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 240 bits (121), Expect = 4e-60 Identities = 251/291 (86%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| |||||||||| |||||| |||| |||||||||| |||||||||| ||||| Sbjct: 2533 gagtctgaatagggcgac-gtcactttttatagacccgaacccgggtgatctaaccatgg 2591 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | | ||| ||||||||||||||| ||||||||| |||| Sbjct: 2592 ccagg-atgaagcttgggtaacaacaagtggaggtccgaaccgaccgatgttgaaaaatc 2650 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||||||||||||||||| ||| |||||| | ||||||||||||||||| Sbjct: 2651 ggcggatgagctgtggttaggggtgaaataccaatcgaactcggagctagctggttctcc 2710 Query: 181 ccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttc 237 |||||||||||||||||||||| || ||| || |||||||||||||| ||||||| Sbjct: 2711 ccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggtaaagctctgtttc 2770 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 288 ||||||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2771 ggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatactaga 2821 Score = 206 bits (104), Expect = 6e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagct 540 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 240 bits (121), Expect = 4e-60 Identities = 233/268 (86%), Gaps = 2/268 (0%) Strand = Plus / Plus Query: 20 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 79 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccaggg-tgaagcttaggt 2487 Query: 80 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 139 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 2488 aacactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgatta 2547 Query: 140 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 199 |||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 2548 ggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgc 2607 Query: 200 agcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggt 258 ||| ||||| | | | ||||||||||||||||||||||| ||||||| | |||||| Sbjct: 2608 agcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggt 2667 Query: 259 accaaatcgaggcaaactctgaatacta 286 |||||||||||||||||||||||||||| Sbjct: 2668 accaaatcgaggcaaactctgaatacta 2695 Score = 155 bits (78), Expect = 2e-34 Identities = 214/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 501 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 559 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 560 cggtaggggagcgttc 575 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 268 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 327 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 328 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 386 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 447 ccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 280 aatac 284 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Minus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Minus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 5434716 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 5434657 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 5434656 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 5434598 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5434597 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 5434538 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 5434537 ccgaaatgtgttgaggcgcagc 5434516 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 3896722 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 3896781 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 3896782 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 3896840 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 3896841 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 3896900 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 3896901 ccgaaatgtgttgaggcgcagc 3896922 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 2807437 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 2807378 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 2807377 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 2807319 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2807318 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 2807259 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 2807258 ccgaaatgtgttgaggcgcagc 2807237 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 1005565 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 1005624 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 1005625 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 1005683 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 1005684 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 1005743 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 1005744 ccgaaatgtgttgaggcgcagc 1005765 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 280 aatac 284 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 280 aatac 284 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 280 aatac 284 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 280 aatac 284 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Minus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Minus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 5944756 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 5944697 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 5944696 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 5944638 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5944637 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 5944578 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 5944577 ccgaaatgtgttgaggcgcagc 5944556 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 4917112 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 4917053 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 4917052 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 4916994 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 4916993 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 4916934 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 4916933 ccgaaatgtgttgaggcgcagc 4916912 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 2503184 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 2503243 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 2503244 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 2503302 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2503303 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 2503362 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 2503363 ccgaaatgtgttgaggcgcagc 2503384 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 2378393 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 2378452 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 2378453 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 2378511 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 2378512 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 2378571 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 2378572 ccgaaatgtgttgaggcgcagc 2378593 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 280 aatac 284 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 280 aatac 284 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 280 aatac 284 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 280 aatac 284 ||||| Sbjct: 2378672 aatac 2378676
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 236 bits (119), Expect = 7e-59 Identities = 248/289 (85%), Gaps = 4/289 (1%) Strand = Plus / Plus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 ||||| ||||||||| |||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 137138 agtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatctaaccatgac 137197 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 |||| ||||||||||| | |||| ||| || | |||||||||| ||||||||| |||| Sbjct: 137198 cagg-atgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgttgaaaaatcg 137256 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 |||||||||||||||||||||| ||||| | | |||||| | |||||||||||||||| Sbjct: 137257 gcggatgagttgtggttaggggagaaattctaatcgaactcggagctagctggttctctt 137316 Query: 182 cgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcg 238 ||||||| ||||||||||||| ||| ||| || ||||||||||||||||||||||| Sbjct: 137317 cgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcg 137376 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 |||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137377 gtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 236 bits (119), Expect = 7e-59 Identities = 248/289 (85%), Gaps = 4/289 (1%) Strand = Plus / Minus Query: 2 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 61 ||||| ||||||||| |||||||| |||||||||||||||| |||||||||| ||||||| Sbjct: 48406 agtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatctaaccatgac 48347 Query: 62 caggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 121 |||| ||||||||||| | |||| ||| || | |||||||||| ||||||||| |||| Sbjct: 48346 cagg-atgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgttgaaaaatcg 48288 Query: 122 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 181 |||||||||||||||||||||| ||||| | | |||||| | |||||||||||||||| Sbjct: 48287 gcggatgagttgtggttaggggagaaattctaatcgaactcggagctagctggttctctt 48228 Query: 182 cgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagcactgtttcg 238 ||||||| ||||||||||||| ||| ||| || ||||||||||||||||||||||| Sbjct: 48227 cgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttcg 48168 Query: 239 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 287 |||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48167 gtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Minus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| ||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 236 bits (119), Expect = 7e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 29 tatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaag 88 |||||||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| Sbjct: 695 tatggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaacgaag 753 Query: 89 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 148 || | |||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 754 tggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 813 Query: 149 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 | ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 814 taccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 867 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 216 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 275 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 276 tctgaatactaga 288 || |||||||||| Sbjct: 944 tcagaatactaga 956
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 236 bits (119), Expect = 7e-59 Identities = 226/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 501 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 559 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 560 cggtaggggagcgttccgc 578 ||||||||||||||||||| Sbjct: 1181 cggtaggggagcgttccgc 1199 Score = 167 bits (84), Expect = 5e-38 Identities = 153/175 (87%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| | Sbjct: 665 ttatggacccgaacccgagtgatctaaccatggccaggg-tgaagctttggtgagactga 723 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | |||| ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 724 gtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaa 783 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 784 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 838 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 279 gaatact 285 ||||||| Sbjct: 917 gaatact 923
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 236 bits (119), Expect = 7e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 29 tatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaag 88 |||||||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| Sbjct: 2464 tatggacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaacgaag 2522 Query: 89 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 148 || | |||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 2523 tggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 2582 Query: 149 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 | ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2583 taccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 216 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 275 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 276 tctgaatactaga 288 || |||||||||| Sbjct: 2713 tcagaatactaga 2725
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 236 bits (119), Expect = 7e-59 Identities = 226/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 501 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 559 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 560 cggtaggggagcgttccgc 578 ||||||||||||||||||| Sbjct: 1194 cggtaggggagcgttccgc 1212 Score = 167 bits (84), Expect = 5e-38 Identities = 153/175 (87%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| | Sbjct: 678 ttatggacccgaacccgagtgatctaaccatggccaggg-tgaagctttggtgagactga 736 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | |||| ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 737 gtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaa 796 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 797 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 851 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 279 gaatact 285 ||||||| Sbjct: 930 gaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 236 bits (119), Expect = 7e-59 Identities = 226/259 (87%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 501 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 559 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 560 cggtaggggagcgttccgc 578 ||||||||||||||||||| Sbjct: 5768 cggtaggggagcgttccgc 5786 Score = 167 bits (84), Expect = 5e-38 Identities = 153/175 (87%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| | Sbjct: 5252 ttatggacccgaacccgagtgatctaaccatggccaggg-tgaagctttggtgagactga 5310 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | |||| ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 5311 gtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaa 5370 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5371 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 5425 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 279 gaatact 285 ||||||| Sbjct: 5504 gaatact 5510
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 234 bits (118), Expect = 3e-58 Identities = 179/198 (90%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||||| |||| || |||| |||||||||| |||||||||| ||||| Sbjct: 5957 gagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgatctaaccatgg 5898 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 5897 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgatgttgaaaaatc 5839 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 5838 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 5779 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 5778 ccgaaatacgttgaggcg 5761 Score = 161 bits (81), Expect = 3e-36 Identities = 165/193 (85%) Strand = Plus / Minus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | | || |||||||||||||||||| ||| ||||| |||||||||||||| |||| Sbjct: 5585 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 5526 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 5525 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 5466 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 5465 gaacggggctaag 5453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 234 bits (118), Expect = 3e-58 Identities = 179/198 (90%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||||| |||| || |||| |||||||||| |||||||||| ||||| Sbjct: 211815 gagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgatctaaccatgg 211874 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 211875 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgatgttgaaaaatc 211933 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 211934 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 211993 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 211994 ccgaaatacgttgaggcg 212011 Score = 161 bits (81), Expect = 3e-36 Identities = 165/193 (85%) Strand = Plus / Plus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | | || |||||||||||||||||| ||| ||||| |||||||||||||| |||| Sbjct: 212187 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 212246 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 212247 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 212306 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 212307 gaacggggctaag 212319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 234 bits (118), Expect = 3e-58 Identities = 179/198 (90%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||| |||||| || |||| |||||||||| |||||||||| ||||| Sbjct: 502 gagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgatctaaccatgg 561 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 562 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgatgttgaaaaatc 620 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 621 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 680 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 681 ccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 218 bits (110), Expect = 2e-53 Identities = 221/255 (86%), Gaps = 6/255 (2%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 2216 gacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgga 2274 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 2275 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 2334 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 212 | |||||| | ||||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 2335 aatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgg 2392 Query: 213 acatcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 269 | | || ||||||||||||||||||| |||||||| | || ||||||||| |||| Sbjct: 2393 aagtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgag 2452 Query: 270 gcaaactctgaatac 284 ||||||||||||||| Sbjct: 2453 gcaaactctgaatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 230 bits (116), Expect = 4e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 188 bits (95), Expect = 1e-44 Identities = 156/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 354 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 413 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 219 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 278 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 279 gaatact 285 ||||||| Sbjct: 546 gaatact 552
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 228 bits (115), Expect = 2e-56 Identities = 115/115 (100%) Strand = Plus / Plus Query: 464 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 524 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 578 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 115
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 228 bits (115), Expect = 2e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 18 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 77 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcg-tgaagcttag 39704 Query: 78 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 137 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 39703 gtaacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggt 39644 Query: 138 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 197 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 39643 taggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggc 39584 Query: 198 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 256 ||||| |||| || | |||||||||||||||||||||||||||||||| ||| Sbjct: 39583 gcagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcg 39524 Query: 257 gtaccaaatcgaggcaaactctgaatacta 286 |||||||||||| ||||||||||||||||| Sbjct: 39523 gtaccaaatcgatgcaaactctgaatacta 39494 Score = 228 bits (115), Expect = 2e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Plus Query: 18 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgg 77 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcg-tgaagcttag 19696 Query: 78 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 137 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| |||||| Sbjct: 19697 gtaacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggt 19756 Query: 138 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 197 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| Sbjct: 19757 taggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggc 19816 Query: 198 gcagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcg 256 ||||| |||| || | |||||||||||||||||||||||||||||||| ||| Sbjct: 19817 gcagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcg 19876 Query: 257 gtaccaaatcgaggcaaactctgaatacta 286 |||||||||||| ||||||||||||||||| Sbjct: 19877 gtaccaaatcgatgcaaactctgaatacta 19906 Score = 165 bits (83), Expect = 2e-37 Identities = 182/215 (84%) Strand = Plus / Minus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| ||| |||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 39289 Query: 513 gaacggggctaagcgatctgccgaagctgtgggat 547 || ||| ||||| || ||||||||||||||||| Sbjct: 39288 gactgggactaagtaatttgccgaagctgtgggat 39254 Score = 165 bits (83), Expect = 2e-37 Identities = 182/215 (84%) Strand = Plus / Plus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| ||| |||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 20111 Query: 513 gaacggggctaagcgatctgccgaagctgtgggat 547 || ||| ||||| || ||||||||||||||||| Sbjct: 20112 gactgggactaagtaatttgccgaagctgtgggat 20146
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 228 bits (115), Expect = 2e-56 Identities = 221/254 (87%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 34 acccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcagag 93 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| ||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccaggg-tgaagcttgggtaaaactaagtggag 1190 Query: 94 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 153 | |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1191 gcccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgcca 1250 Query: 154 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 213 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1251 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagatta 1310 Query: 214 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 272 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 1311 taacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgca 1370 Query: 273 aactctgaatacta 286 |||| |||||||| Sbjct: 1371 aactaagaatacta 1384 Score = 208 bits (105), Expect = 1e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | ||| |||| ||||||||||||| |||| ||||| |||||||||||||| |||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 513 gaacggggctaagcgatctgccgaagctgtgggatgt 549 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 catcggtaggggagcgttccg 577 ||||||||||||||||||||| Sbjct: 1672 catcggtaggggagcgttccg 1692
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 226 bits (114), Expect = 6e-56 Identities = 183/206 (88%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| ||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 500 ttgcgctgaagatgaacggggctaag 525 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 196 bits (99), Expect = 6e-47 Identities = 157/175 (89%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccccggtgatctaaccatgtccagg-atgaagcttgggtaacaccaa 353 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaa 413 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 202 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 414 atgccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 280 aatactagat 289 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 226 bits (114), Expect = 6e-56 Identities = 227/260 (87%), Gaps = 6/260 (2%) Strand = Plus / Plus Query: 28 ttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaa 87 |||| |||||||||| ||||||||| ||||| ||||| ||||||||||| | | || || Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccagg-atgaagcttgggtaacaccaa 353 Query: 88 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 147 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 354 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 413 Query: 148 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 205 |||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 414 atgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaa 473 Query: 206 tgactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 264 ||| | | |||| | |||||||||||||||||||||||||||| | || |||||||||| Sbjct: 474 tgatt--aaatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaa 531 Query: 265 tcgaggcaaactctgaatac 284 ||||| ||||||| |||||| Sbjct: 532 tcgagacaaactcagaatac 551 Score = 214 bits (108), Expect = 2e-52 Identities = 199/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 226 bits (114), Expect = 6e-56 Identities = 236/273 (86%), Gaps = 4/273 (1%) Strand = Plus / Plus Query: 20 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 79 |||||| |||||||||||||||| |||||||||| |||| ||||| ||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccagg-atgaaatttgggt 914 Query: 80 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 139 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| ||| Sbjct: 915 aacaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgatta 974 Query: 140 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 199 |||| ||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 975 ggggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgc 1034 Query: 200 agcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcg 256 ||| ||| || | |||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 1035 agcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcg 1094 Query: 257 gtaccaaatcgaggcaaactctgaatactagat 289 ||||||| ||| ||||||||| ||||||||||| Sbjct: 1095 gtaccaagtcgtggcaaactcagaatactagat 1127 Score = 121 bits (61), Expect = 3e-24 Identities = 157/189 (83%) Strand = Plus / Plus Query: 355 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 414 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 415 ggtgggggtgcaaagacagccaggaggtttgcccagaagcagccaccctttaaagagtgc 474 ||| | ||| | ||| ||||||||||||| |||||||||||||||| | ||||||| Sbjct: 1237 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtgc 1296 Query: 475 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 534 |||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||||| Sbjct: 1297 gtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctgcc 1356 Query: 535 gaagctgtg 543 ||||||||| Sbjct: 1357 gaagctgtg 1365
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 226 bits (114), Expect = 6e-56 Identities = 178/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||||||||||||| |||||| || |||| |||||||||| ||||||||| ||||| Sbjct: 356118 gagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatctaaccatgg 356177 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 356178 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgatgttgaaaaatc 356236 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 356237 agcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 356296 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 356297 ccgaaatacgttgaggcg 356314 Score = 129 bits (65), Expect = 1e-26 Identities = 161/193 (83%) Strand = Plus / Plus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | || |||||||||||||||||| ||| ||||| ||||||||||||| |||| Sbjct: 356490 atcagtactaagtgataaaggaggtgggattgcttagacaaccaggaggtttgcttagaa 356549 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 356550 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 356609 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 356610 gaacggggctaag 356622 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcga 268 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 226 bits (114), Expect = 6e-56 Identities = 241/277 (87%), Gaps = 6/277 (2%) Strand = Plus / Plus Query: 20 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttggat 79 |||||| |||||||||||||||| |||||||||| ||||||||||| ||||||||||| | Sbjct: 692 gtcacttcttatggacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggt 750 Query: 80 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 139 || | ||| ||||||||||||||| ||||||||| |||| |||||||||||||||||| Sbjct: 751 aaatccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggtta 810 Query: 140 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 199 |||| ||||| ||| |||||| | ||||||||||| |||||||||||||||||||||||| Sbjct: 811 ggggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgc 870 Query: 200 agcagt--tgactggac-atctaggggtaaagc-actgtttcggtgcgggctgcgcgagc 255 ||| || || || || |||| |||||||||| ||||||||| ||||||||||| || Sbjct: 871 agcggtaacga-tgaactatcttggggtaaagctactgtttcgatgcgggctgcgaaagt 929 Query: 256 ggtaccaaatcgaggcaaactctgaatactagatatg 292 |||||||| ||| ||||||||| |||||| ||||||| Sbjct: 930 ggtaccaagtcgtggcaaactcagaatacaagatatg 966 Score = 167 bits (84), Expect = 5e-38 Identities = 189/224 (84%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 |||||| |||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1157 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 ||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1158 tgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 226 bits (114), Expect = 6e-56 Identities = 229/262 (87%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||||||||| ||||||||||| | | || | | | Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccagg-atgaagcttgggtaataccacgtgaa 2777 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| || Sbjct: 2778 ggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacc 2837 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 212 | |||||| | ||||||||||||||||||||||||||||||||||||| | || | | Sbjct: 2838 agtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaag 2896 Query: 213 ac-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 270 || |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| || Sbjct: 2897 actatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtgg 2956 Query: 271 caaactctgaatactagatatg 292 |||||||||||||||||||||| Sbjct: 2957 caaactctgaatactagatatg 2978 Score = 85.7 bits (43), Expect = 1e-13 Identities = 142/170 (83%), Gaps = 5/170 (2%) Strand = Plus / Plus Query: 319 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 378 |||||||||||| ||||||||||||||||| || ||||||||||| ||| ||| || Sbjct: 2988 ggccagtgagacagtgggggataagcttcattgta-agagggaaaca-cccagat-ac-- 3042 Query: 379 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 438 |||||||||||||||||| | | |||| |||||||||| | ||| ||||| |||| Sbjct: 3043 gctaaggcccctaaatgattgttaagtggcaaaggaggtgagaatgctcagacaaccaga 3102 Query: 439 aggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactg 488 |||||||| ||||||||| | |||||||||||||||||| ||||||||| Sbjct: 3103 aggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcactg 3152
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 224 bits (113), Expect = 2e-55 Identities = 226/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 555 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 556 gcatcggtaggggagcgttccg 577 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 178 bits (90), Expect = 1e-41 Identities = 175/202 (86%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 268 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgt 327 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 328 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 386 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 ggcggatgaggtgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||| ||||||||| Sbjct: 447 ccgaaatgtgtttaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 280 aatac 284 ||||| Sbjct: 547 aatac 551
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 224 bits (113), Expect = 2e-55 Identities = 256/299 (85%), Gaps = 11/299 (3%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgggtgatctatc 55 ||||||||||||||||||| |||||| | |||||||||||||| |||||||||| Sbjct: 781 gagtcttaatagggcgattaaagagtcacttcctatggacccgaacccgggtgatctaat 840 Query: 56 catgaccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 115 |||||||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 841 catgaccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 899 Query: 116 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 175 |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||||||||||| Sbjct: 900 aaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggagctagctgga 959 Query: 176 tctccccgaaatgcgttgaggcgcagcagttgact---ggacatctaggggtaaagc-ac 231 ||||||||||||||||||||||||||| | ||||| | |||||| |||||||| || Sbjct: 960 tctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagaggtaaagctac 1018 Query: 232 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 290 ||||||| ||||||||||| ||||||||||| ||| ||||||||| |||||||||||| Sbjct: 1019 tgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaatactagata 1077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 355 agagggaaacagcccggatcaccagctaaggcccctaaatg 395 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 449 agaagcagccaccctttaaagagtgcgtaatagctcactg 488 ||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1849 agaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 224 bits (113), Expect = 2e-55 Identities = 256/299 (85%), Gaps = 11/299 (3%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgggtgatctatc 55 ||||||||||||||||||| |||||| | |||||||||||||| |||||||||| Sbjct: 781 gagtcttaatagggcgattaaagagtcacttcctatggacccgaacccgggtgatctaat 840 Query: 56 catgaccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 115 |||||||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| Sbjct: 841 catgaccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaa 899 Query: 116 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 175 |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||||||||||| Sbjct: 900 aaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggagctagctgga 959 Query: 176 tctccccgaaatgcgttgaggcgcagcagttgact---ggacatctaggggtaaagc-ac 231 ||||||||||||||||||||||||||| | ||||| | |||||| |||||||| || Sbjct: 960 tctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagaggtaaagctac 1018 Query: 232 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 290 ||||||| ||||||||||| ||||||||||| ||| ||||||||| |||||||||||| Sbjct: 1019 tgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaatactagata 1077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 355 agagggaaacagcccggatcaccagctaaggcccctaaatg 395 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 222 bits (112), Expect = 1e-54 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 218 bits (110), Expect = 2e-53 Identities = 221/255 (86%), Gaps = 6/255 (2%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| |||||||||| ||||| ||||| ||||||||||| | |||| ||| || Sbjct: 300 gacccgaacccgggtgatctaaccatggccagg-atgaagcttgggtaaaaccaagtgga 358 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 |||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 359 ggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcc 418 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 212 | |||||| | ||||||||||||||||||||||||| ||||||||||||| || | ||| Sbjct: 419 aatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgg 476 Query: 213 acatcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 269 | | || ||||||||||||||||||| |||||||| | || ||||||||| |||| Sbjct: 477 aagtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgag 536 Query: 270 gcaaactctgaatac 284 ||||||||||||||| Sbjct: 537 gcaaactctgaatac 551
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 222 bits (112), Expect = 1e-54 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 320 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 379 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 380 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 439 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 440 ggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 499 |||||||| |||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 500 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 177/202 (87%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| || |||||||| ||| || |||| |||||||||| ||||||||| ||||| Sbjct: 268 gagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaaccatgg 327 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 328 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 386 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 387 ggcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggttctcc 446 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||| ||||||||||||| Sbjct: 447 ccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 280 aatac 284 ||||| Sbjct: 547 aatac 551
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 220 bits (111), Expect = 4e-54 Identities = 223/257 (86%), Gaps = 4/257 (1%) Strand = Plus / Minus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 27136 gacccgaacccggatgatctagccatggccaggg-tgaagcttaggtaacactaagtgga 27078 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 ||||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||| Sbjct: 27077 ggtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatgcc 27018 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 210 | ||||| || ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 27017 aatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatgct 26958 Query: 211 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 270 | | ||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 26957 ata-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgatg 26899 Query: 271 caaactctgaatactag 287 ||||||||||||||||| Sbjct: 26898 caaactctgaatactag 26882 Score = 151 bits (76), Expect = 3e-33 Identities = 190/228 (83%) Strand = Plus / Minus Query: 322 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 381 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 382 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 441 ||||||||||||| | || |||||||||||| || | ||| | ||| |||||||| Sbjct: 26808 aaggcccctaaataattactaagtgataaaggaagtaagaatgcgtaaacaaccaggagg 26749 Query: 442 tttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 501 || || ||||||||| | |||||||||||||||||||||||||||| | || | ||| Sbjct: 26748 ttcgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtttagtgatctt 26689 Query: 502 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 549 |||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 26688 gcgccgaaaatgaacggggctaagtaatttgccgaagctgtgggatgt 26641
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 322 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 381 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 382 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 441 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 442 tttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 501 || || |||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 502 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 322 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 381 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 382 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 441 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 442 tttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 501 || || |||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 502 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 544 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 202 bits (102), Expect = 9e-49 Identities = 206/237 (86%), Gaps = 3/237 (1%) Strand = Plus / Minus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 ||||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| || Sbjct: 2051170 gacccgaacctgggtgatctaaccatggccaggc-tgaagcttgggtaaagccaagtgga 2051112 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 || |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 2051111 gggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcc 2051052 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 212 | |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 2051051 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacggg 2050993 Query: 213 -acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 268 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050992 tacctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 202 bits (102), Expect = 9e-49 Identities = 206/237 (86%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 33 gacccgaacctgggtgatctatccatgaccaggnatgaagcttggatgaaactaagcaga 92 ||||||||||||||||||||| ||||| ||||| |||||||||| | || | ||| || Sbjct: 1450331 gacccgaacctgggtgatctaaccatggccaggc-tgaagcttgggtaaagccaagtgga 1450389 Query: 93 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 152 || |||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 1450390 gggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcc 1450449 Query: 153 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 212 | |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 1450450 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacggg 1450508 Query: 213 -acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 268 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450509 tacctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 220 bits (111), Expect = 4e-54 Identities = 254/295 (86%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 2 agtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||| Sbjct: 668 agtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgatctattcatgg 727 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 728 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 786 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||| |||||| ||||| ||| |||||| | ||||||||||| ||||| Sbjct: 787 ggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagctggatctcc 846 Query: 181 ccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc-actgtttc 237 |||||||||||||||||||||| || | ||| | |||| |||||||||| |||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagcgactgtttc 906 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 | ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||||||| Sbjct: 907 gatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaagatatg 961 Score = 157 bits (79), Expect = 5e-35 Identities = 187/223 (83%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||| || ||||||||| ||| || ||||||||||||||||||||||| | |||| || Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactggtaaagcgttct 1152 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1153 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1195
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 220 bits (111), Expect = 4e-54 Identities = 254/295 (86%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 2 agtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgatctatccatga 60 ||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||| |||| Sbjct: 668 agtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgatctattcatgg 727 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | | || ||| ||||||||||||||| ||||||||| |||| Sbjct: 728 ccagg-atgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatc 786 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||| |||||| ||||| ||| |||||| | ||||||||||| ||||| Sbjct: 787 ggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagctggatctcc 846 Query: 181 ccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc-actgtttc 237 |||||||||||||||||||||| || | ||| | |||| |||||||||| |||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagcgactgtttc 906 Query: 238 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 292 | ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||||||| Sbjct: 907 gatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaagatatg 961 Score = 157 bits (79), Expect = 5e-35 Identities = 187/223 (83%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||| || ||||||||| ||| || ||||||||||||||||||||||| | |||| || Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactggtaaagcgttct 1152 Query: 501 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 543 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1153 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1195
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 220 bits (111), Expect = 4e-54 Identities = 244/280 (87%), Gaps = 10/280 (3%) Strand = Plus / Plus Query: 19 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggnatgaagcttgga 78 ||||||| ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccagg-atgaagcttggg 844 Query: 79 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 138 | |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| ||||||| Sbjct: 845 taaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggtt 904 Query: 139 aggggtgaaatgccactcgaacccagagctagctggttctccccg-aaatgcgttgaggc 197 ||||||||||||||| |||||| | ||||||||| |||||||||| ||||||||||| || Sbjct: 905 aggggtgaaatgccaatcgaactc-gagctagct-gttctccccgtaaatgcgttga-gc 961 Query: 198 gcagcagt---tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcg 252 ||||| || ||||| || |||||||||||||||||||||||||||||||||||| | Sbjct: 962 gcagcggttgatgacttgggctatctaggggtaaagcactgtttcggtgcgggctgcgag 1021 Query: 253 agcggtaccaaatcgaggcaaactctgaatactagatatg 292 ||||||||||||||| ||||||| ||||||||| |||| Sbjct: 1022 agcggtaccaaatcgtagcaaactaagaatactaggtatg 1061 Score = 139 bits (70), Expect = 1e-29 Identities = 103/114 (90%) Strand = Plus / Plus Query: 434 ccaggaggtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 493 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | || Sbjct: 1184 ccaggaggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtgga 1243 Query: 494 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 547 ||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1244 gcgttcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1297 Score = 129 bits (65), Expect = 1e-26 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggt 417 ||||||||||||||| ||||| |||| ||||||||| Sbjct: 1132 taaggcccctaaatggccgctaagtggcaaaggaggt 1168 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 558 atcggtaggggagcgttccgc 578 ||||||||||||||||||||| Sbjct: 1547 atcggtaggggagcgttccgc 1567
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 218 bits (110), Expect = 2e-53 Identities = 177/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||| |||||| || |||| |||||||||| |||||||||| ||||| Sbjct: 2138141 gagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgatctaaccatgg 2138082 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| |||||||||||||||||| |||||| | || Sbjct: 2138081 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgacgttgaaaagtc 2138023 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2138022 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 2137963 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 2137962 ccgaaatacgttgaggcg 2137945 Score = 218 bits (110), Expect = 2e-53 Identities = 177/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||| |||||| || |||| |||||||||| |||||||||| ||||| Sbjct: 476719 gagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgatctaaccatgg 476778 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| |||||||||||||||||| |||||| | || Sbjct: 476779 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgacgttgaaaagtc 476837 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 476838 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 476897 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 476898 ccgaaatacgttgaggcg 476915 Score = 176 bits (89), Expect = 5e-41 Identities = 167/193 (86%) Strand = Plus / Minus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | | || |||||||||||||||||| |||| ||||| |||||||||||||| |||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 2137650 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 2137649 gaacggggctaag 2137637 Score = 176 bits (89), Expect = 5e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | | || |||||||||||||||||| |||| ||||| |||||||||||||| |||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 477210 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 477211 gaacggggctaag 477223 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 218 bits (110), Expect = 2e-53 Identities = 180/202 (89%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| |||||||||| |||| || || | |||||||||| |||||||||| ||||| Sbjct: 269 gagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatctaaccatgt 328 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| | |||| ||| ||||||||||||||| ||||||||| |||| Sbjct: 329 ccagg-atgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatc 387 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 388 ggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 447 Query: 181 ccgaaatgcgttgaggcgcagc 202 |||||||||||||||||||||| Sbjct: 448 ccgaaatgcgttgaggcgcagc 469 Score = 216 bits (109), Expect = 6e-53 Identities = 182/205 (88%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 321 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 380 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 381 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 440 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 441 gtttgcccagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 500 ||||||| ||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 501 tgcgctgaagatgaacggggctaag 525 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 220 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 279 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 280 aatac 284 ||||| Sbjct: 548 aatac 552
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 218 bits (110), Expect = 2e-53 Identities = 177/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||| |||||| || |||| |||||||||| |||||||||| ||||| Sbjct: 339392 gagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgatctaaccatgg 339333 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| |||||||||||||||||| |||||| | || Sbjct: 339332 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgacgttgaaaagtc 339274 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 339273 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 339214 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 339213 ccgaaatacgttgaggcg 339196 Score = 218 bits (110), Expect = 2e-53 Identities = 177/198 (89%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 1 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 60 |||||| ||||||||| |||||| || |||| |||||||||| |||||||||| ||||| Sbjct: 132452 gagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgatctaaccatgg 132393 Query: 61 ccaggnatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 120 ||||| ||||||||||| ||| || ||| |||||||||||||||||| |||||| | || Sbjct: 132392 ccagg-atgaagcttgggtgataccaagtggaggtccgaaccgactgacgttgaaaagtc 132334 Query: 121 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 180 |||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 132333 agcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagctggttctcc 132274 Query: 181 ccgaaatgcgttgaggcg 198 ||||||| |||||||||| Sbjct: 132273 ccgaaatacgttgaggcg 132256 Score = 153 bits (77), Expect = 8e-34 Identities = 164/193 (84%) Strand = Plus / Minus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | | || |||||||||||||||||| | || ||||| |||||||||||||| |||| Sbjct: 339020 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 338961 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| || Sbjct: 338960 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaaat 338901 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 338900 gaacggggctaag 338888 Score = 153 bits (77), Expect = 8e-34 Identities = 164/193 (84%) Strand = Plus / Minus Query: 333 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 392 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 393 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcccagaa 452 || | | || |||||||||||||||||| | || ||||| |||||||||||||| |||| Sbjct: 132080 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 132021 Query: 453 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 512 ||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| || Sbjct: 132020 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaaat 131961 Query: 513 gaacggggctaag 525 ||||||||||||| Sbjct: 131960 gaacggggctaag 131948 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 234 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 284 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,611,215 Number of Sequences: 3902068 Number of extensions: 3611215 Number of successful extensions: 69289 Number of sequences better than 10.0: 2661 Number of HSP's better than 10.0 without gapping: 2687 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 52346 Number of HSP's gapped (non-prelim): 15852 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)