ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16n24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187710.1| Oryza sativa (japonica cultivar-group), predic... 172 2e-40
2dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 2e-40
3dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 2e-40
4dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 2e-40
5dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 2e-40
6gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, comple... 170 8e-40
7gb|AY105930.1| Zea mays PCO135569 mRNA sequence 155 5e-35
8gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence 149 3e-33
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
10dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
11dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic D... 147 1e-32
12dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.12
13dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.12
14gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's H... 42 0.47
15gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's H... 42 0.47
16ref|XM_479312.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.9
17emb|AL121867.13|HSA405O21 Human DNA sequence from clone RP11-405... 40 1.9
18gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map... 40 1.9
19gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O19 ma... 40 1.9
20ref|XM_683420.1| PREDICTED: Danio rerio similar to desmoglein 2 ... 40 1.9
21gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 1.9
22dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
23dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
24dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
25dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.9
26gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 40 1.9
27gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, compl... 38 7.3
28gb|AC133103.5| Mus musculus BAC clone RP23-226J10 from chromosom... 38 7.3
29gb|AC125149.4| Mus musculus BAC clone RP24-354E17 from chromosom... 38 7.3
30gb|AC123856.4| Mus musculus BAC clone RP23-341H24 from chromosom... 38 7.3
31gb|AC126799.3| Mus musculus BAC clone RP24-388B22 from chromosom... 38 7.3
32gb|AC164544.4| Mus musculus chromosome 1, clone RP24-163G4, comp... 38 7.3
33ref|NM_001012320.1| Homo sapiens zinc finger protein 302 (ZNF302... 38 7.3
34ref|NM_018443.2| Homo sapiens zinc finger protein 302 (ZNF302), ... 38 7.3
35gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, comp... 38 7.3
36gb|AY500357.1| Homo sapiens zinc finger protein 17 (HZF17) mRNA,... 38 7.3
37ref|XM_764040.1| Giardia lamblia ATCC 50803 variant-specific sur... 38 7.3
38gb|AY152828.1| Felis catus clone PAC f20 major histocompatiblity... 38 7.3
39emb|AL834318.1|HSM805362 Homo sapiens mRNA; cDNA DKFZp434M147 (f... 38 7.3
40dbj|AK131278.1| Homo sapiens cDNA FLJ16225 fis, clone DFNES20111... 38 7.3
41emb|CR621737.1| full-length cDNA clone CS0DF013YG16 of Fetal bra... 38 7.3
42dbj|AK122855.1| Homo sapiens cDNA FLJ16476 fis, clone BRSSN20175... 38 7.3
43dbj|AK074901.1| Homo sapiens cDNA FLJ90420 fis, clone NT2RP30002... 38 7.3
44emb|CR596326.1| full-length cDNA clone CS0DF025YD22 of Fetal bra... 38 7.3
45gb|AC092325.2| Homo sapiens chromosome 16 clone RP11-14K3, compl... 38 7.3
46gb|AC022143.7| Homo sapiens chromosome 19 clone CTD-2378H7, comp... 38 7.3
47gb|AF410771.1|AF410771 Homo sapiens C1q-related factor (CRF) gen... 38 7.3
48dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.3
49gb|AF326206.1|AF326206 Homo sapiens ZNF140-like transcription fa... 38 7.3
50gb|AC020910.7| Homo sapiens chromosome 19 clone CTD-2553L13, com... 38 7.3
51gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome... 38 7.3
52gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588... 38 7.3
53gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, c... 38 7.3
54gb|DQ071615.1| Bat SARS coronavirus Rp3, complete genome 38 7.3
55gb|AF265236.1|AF265236 Homo sapiens ZNF135-like protein mRNA, co... 38 7.3
56gb|AF155656.1|AF155656 Homo sapiens zinc finger protein ZNF140-l... 38 7.3
57ref|XM_312882.2| Anopheles gambiae str. PEST ENSANGP00000014729 ... 38 7.3
58gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.3
59emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007... 38 7.3
60gb|AC132444.3| Mus musculus BAC clone RP23-160D6 from 8, complet... 38 7.3
61gb|AC131696.4| Mus musculus BAC clone RP23-403E5 from 1, complet... 38 7.3
62gb|AC168977.6| Mus musculus chromosome 1, clone RP23-285N8, comp... 38 7.3
63emb|AL162002.1|HSM802518 Homo sapiens mRNA; cDNA DKFZp434I0114 (... 38 7.3
64gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, compl... 38 7.3
65emb|AL833690.1|HSM805003 Homo sapiens mRNA; cDNA DKFZp667K228 (f... 38 7.3 
>ref|NM_187710.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 774

 Score =  172 bits (87), Expect = 2e-40
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaa 60
           |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 93  gaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatctttgacaa 152

                                                                       
Query: 61  agcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgt 120
           | ||||||||||||||| ||| |||||||| || ||||||||||| || ||||||||| |
Sbjct: 153 aacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatat 212

                                         
Query: 121 tgaagtnggaaaagggtcttcaatttggta 150
           | |||| ||| ||||  |||||||||||||
Sbjct: 213 tcaagttggacaaggagcttcaatttggta 242
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>dbj|AK122051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G12, full
           insert sequence
          Length = 1036

 Score =  172 bits (87), Expect = 2e-40
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaa 60
           |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 192 gaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatctttgacaa 251

                                                                       
Query: 61  agcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgt 120
           | ||||||||||||||| ||| |||||||| || ||||||||||| || ||||||||| |
Sbjct: 252 aacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatat 311

                                         
Query: 121 tgaagtnggaaaagggtcttcaatttggta 150
           | |||| ||| ||||  |||||||||||||
Sbjct: 312 tcaagttggacaaggagcttcaatttggta 341
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>dbj|AK104205.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-F03, full
           insert sequence
          Length = 1086

 Score =  172 bits (87), Expect = 2e-40
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaa 60
           |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 242 gaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatctttgacaa 301

                                                                       
Query: 61  agcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgt 120
           | ||||||||||||||| ||| |||||||| || ||||||||||| || ||||||||| |
Sbjct: 302 aacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatat 361

                                         
Query: 121 tgaagtnggaaaagggtcttcaatttggta 150
           | |||| ||| ||||  |||||||||||||
Sbjct: 362 tcaagttggacaaggagcttcaatttggta 391
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>dbj|AK071713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109L19, full
           insert sequence
          Length = 1156

 Score =  172 bits (87), Expect = 2e-40
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaa 60
           |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 234 gaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatctttgacaa 293

                                                                       
Query: 61  agcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgt 120
           | ||||||||||||||| ||| |||||||| || ||||||||||| || ||||||||| |
Sbjct: 294 aacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatat 353

                                         
Query: 121 tgaagtnggaaaagggtcttcaatttggta 150
           | |||| ||| ||||  |||||||||||||
Sbjct: 354 tcaagttggacaaggagcttcaatttggta 383
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>dbj|AK060908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F08, full
           insert sequence
          Length = 1086

 Score =  172 bits (87), Expect = 2e-40
 Identities = 134/150 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaactacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaa 60
           |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 242 gaactactacttccacgagcagctctcaaggcatcgcacacttatgaacatctttgacaa 301

                                                                       
Query: 61  agcccctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgt 120
           | ||||||||||||||| ||| |||||||| || ||||||||||| || ||||||||| |
Sbjct: 302 aacccctcatgttcacagagatgcatttgttgccccaagtgcatctctcattggtgatat 361

                                         
Query: 121 tgaagtnggaaaagggtcttcaatttggta 150
           | |||| ||| ||||  |||||||||||||
Sbjct: 362 tcaagttggacaaggagcttcaatttggta 391
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>gb|AY596527.1| Saccharum officinarum clone SCCCLB1004G11, complete sequence
          Length = 1189

 Score =  170 bits (86), Expect = 8e-40
 Identities = 113/122 (92%)
 Strand = Plus / Minus

                                                                       
Query: 5   tacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaaagcc 64
           |||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||
Sbjct: 950 tacttcttccacgagcagatttcaaggcatcgcaccatcatgaatatctttgacaaaacc 891

                                                                       
Query: 65  cctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgttgaa 124
           ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 890 cctcatgttcataaagacgcatttgttgctccaagtgcatcccttattggtgatgttcaa 831

             
Query: 125 gt 126
           ||
Sbjct: 830 gt 829
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>gb|AY105930.1| Zea mays PCO135569 mRNA sequence
          Length = 1279

 Score =  155 bits (78), Expect = 5e-35
 Identities = 111/122 (90%)
 Strand = Plus / Plus

                                                                       
Query: 5   tacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaaagcc 64
           |||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||
Sbjct: 219 tacttcttccacgagcagatttcaaggcatcgcaccatcatgaatatctttgacaaaacc 278

                                                                       
Query: 65  cctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgttgaa 124
           |||||||| || ||||| |||||||| ||||||||||||||||||||||| |||||| ||
Sbjct: 279 cctcatgtgcataaagacgcatttgttgctccaagtgcatcccttattggcgatgttcaa 338

             
Query: 125 gt 126
           ||
Sbjct: 339 gt 340
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>gb|BT017158.1| Zea mays clone EL01N0368A12.c mRNA sequence
          Length = 1060

 Score =  149 bits (75), Expect = 3e-33
 Identities = 128/146 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   tacttcttccacgagcagatttcaaggcatcgcacacttatgaacatctttgacaaagcc 64
           |||||||||||||||||||||||||||||||||||  | ||||| |||||||||||| ||
Sbjct: 175 tacttcttccacgagcagatttcaaggcatcgcaccatcatgaatatctttgacaaatcc 234

                                                                       
Query: 65  cctcatgttcacaaagaggcatttgtcgctccaagtgcatcccttattggtgatgttgaa 124
           || |||||||| |  || |||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 235 ccacatgttcatagggatgcatttgttgctccaagtgcatcccttattggtgatgttcaa 294

                                     
Query: 125 gtnggaaaagggtcttcaatttggta 150
           || ||  ||||  |||| ||||||||
Sbjct: 295 gtcgggcaaggagcttccatttggta 320
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  147 bits (74), Expect = 1e-32
 Identities = 112/125 (89%)
 Strand = Plus / Plus

                                                                            
Query: 26       tcaaggcatcgcacacttatgaacatctttgacaaagcccctcatgttcacaaagaggca 85
                |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||
Sbjct: 10119385 tcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgca 10119444

                                                                            
Query: 86       tttgtcgctccaagtgcatcccttattggtgatgttgaagtnggaaaagggtcttcaatt 145
                ||||| || ||||||||||| || ||||||||| || |||| ||| ||||  ||||||||
Sbjct: 10119445 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 10119504

                     
Query: 146      tggta 150
                |||||
Sbjct: 10119505 tggta 10119509
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>dbj|AP003631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0581F09
          Length = 154248

 Score =  147 bits (74), Expect = 1e-32
 Identities = 112/125 (89%)
 Strand = Plus / Plus

                                                                         
Query: 26    tcaaggcatcgcacacttatgaacatctttgacaaagcccctcatgttcacaaagaggca 85
             |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||
Sbjct: 66854 tcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgca 66913

                                                                         
Query: 86    tttgtcgctccaagtgcatcccttattggtgatgttgaagtnggaaaagggtcttcaatt 145
             ||||| || ||||||||||| || ||||||||| || |||| ||| ||||  ||||||||
Sbjct: 66914 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 66973

                  
Query: 146   tggta 150
             |||||
Sbjct: 66974 tggta 66978
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>dbj|AP003018.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004B13
          Length = 142268

 Score =  147 bits (74), Expect = 1e-32
 Identities = 112/125 (89%)
 Strand = Plus / Plus

                                                                         
Query: 26    tcaaggcatcgcacacttatgaacatctttgacaaagcccctcatgttcacaaagaggca 85
             |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||
Sbjct: 43984 tcaaggcatcgcacacttatgaacatctttgacaaaacccctcatgttcacagagatgca 44043

                                                                         
Query: 86    tttgtcgctccaagtgcatcccttattggtgatgttgaagtnggaaaagggtcttcaatt 145
             ||||| || ||||||||||| || ||||||||| || |||| ||| ||||  ||||||||
Sbjct: 44044 tttgttgccccaagtgcatctctcattggtgatattcaagttggacaaggagcttcaatt 44103

                  
Query: 146   tggta 150
             |||||
Sbjct: 44104 tggta 44108
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>dbj|AK103904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150M03, full
           insert sequence
          Length = 1238

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 17  gagcagatttcaaggcatcgcacacttatgaacatctttgacaaag 62
           |||||| ||||||||||||||||  | |||||||| ||||| ||||
Sbjct: 281 gagcagctttcaaggcatcgcacgatcatgaacatatttgagaaag 326
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>dbj|AK058974.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-D04, full
           insert sequence
          Length = 1195

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 17  gagcagatttcaaggcatcgcacacttatgaacatctttgacaaag 62
           |||||| ||||||||||||||||  | |||||||| ||||| ||||
Sbjct: 283 gagcagctttcaaggcatcgcacgatcatgaacatatttgagaaag 328
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>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 184149

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    tgttcacaaagaggcatttgt 90
             |||||||||||||||||||||
Sbjct: 49878 tgttcacaaagaggcatttgt 49858
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>gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 143322

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     tgttcacaaagaggcatttgt 90
              |||||||||||||||||||||
Sbjct: 113507 tgttcacaaagaggcatttgt 113487
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>ref|XM_479312.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1155

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 27  caaggcatcgcacacttatgaacatctttgacaaag 62
           |||||||||||||| | |||||||| ||||| ||||
Sbjct: 201 caaggcatcgcacaatcatgaacatatttgagaaag 236
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>emb|AL121867.13|HSA405O21 Human DNA sequence from clone RP11-405O21 on chromosome Xq21.1-21.32
             Contains STSs and GSSs, complete sequence
          Length = 131238

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ttatgaacatctttgacaaa 61
             ||||||||||||||||||||
Sbjct: 42500 ttatgaacatctttgacaaa 42519
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>gb|AC002335.3| Arabidopsis thaliana chromosome 2 clone T1O24 map CIC10F02, complete
              sequence
          Length = 102057

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     aagcccctcatgttcacaaa 79
              ||||||||||||||||||||
Sbjct: 101979 aagcccctcatgttcacaaa 101960
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>gb|AC002333.3| Arabidopsis thaliana chromosome 2 clone F18O19 map CIC10F02, complete
             sequence
          Length = 98734

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    aagcccctcatgttcacaaa 79
             ||||||||||||||||||||
Sbjct: 86809 aagcccctcatgttcacaaa 86828
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>ref|XM_683420.1| PREDICTED: Danio rerio similar to desmoglein 2 (LOC560026), mRNA
          Length = 4812

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  atcccttattggtgatgttg 122
            ||||||||||||||||||||
Sbjct: 4695 atcccttattggtgatgttg 4714
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gaaaagggtcttcaatttgg 148
              ||||||||||||||||||||
Sbjct: 346398 gaaaagggtcttcaatttgg 346417
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 27       caaggcatcgcacacttatgaacatctttgacaaag 62
                |||||||||||||| | |||||||| ||||| ||||
Sbjct: 26724330 caaggcatcgcacaatcatgaacatatttgagaaag 26724295
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>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_C06
          Length = 143168

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 27    caaggcatcgcacacttatgaacatctttgacaaag 62
             |||||||||||||| | |||||||| ||||| ||||
Sbjct: 71187 caaggcatcgcacaatcatgaacatatttgagaaag 71152
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0524G08
          Length = 146690

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 27     caaggcatcgcacacttatgaacatctttgacaaag 62
              |||||||||||||| | |||||||| ||||| ||||
Sbjct: 141934 caaggcatcgcacaatcatgaacatatttgagaaag 141899
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>dbj|AK060158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-G03, full
           insert sequence
          Length = 1155

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 27  caaggcatcgcacacttatgaacatctttgacaaag 62
           |||||||||||||| | |||||||| ||||| ||||
Sbjct: 201 caaggcatcgcacaatcatgaacatatttgagaaag 236
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     gaaaagggtcttcaatttgg 148
               ||||||||||||||||||||
Sbjct: 2003776 gaaaagggtcttcaatttgg 2003757
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>gb|AC147806.5| Mus musculus chromosome 1, clone RP23-6O16, complete sequence
          Length = 229200

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 58579 tctttgacaaagcccctca 58597
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>gb|AC133103.5| Mus musculus BAC clone RP23-226J10 from chromosome 1, complete sequence
          Length = 241735

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 191588 tctttgacaaagcccctca 191570



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 101958 tctttgacaaagcccctca 101976



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 63953 tctttgacaaagcccctca 63935
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>gb|AC125149.4| Mus musculus BAC clone RP24-354E17 from chromosome 1, complete sequence
          Length = 169725

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 133042 tctttgacaaagcccctca 133024



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 16728 tctttgacaaagcccctca 16710
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>gb|AC123856.4| Mus musculus BAC clone RP23-341H24 from chromosome 1, complete sequence
          Length = 226881

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 131421 tctttgacaaagcccctca 131439



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 46620 tctttgacaaagcccctca 46602
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>gb|AC126799.3| Mus musculus BAC clone RP24-388B22 from chromosome 13, complete
             sequence
          Length = 168873

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 37    cacacttatgaacatctttgaca 59
             |||||||||| ||||||||||||
Sbjct: 19510 cacacttatggacatctttgaca 19532
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>gb|AC164544.4| Mus musculus chromosome 1, clone RP24-163G4, complete sequence
          Length = 142689

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 118353 tctttgacaaagcccctca 118335



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 44974 tctttgacaaagcccctca 44992
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>ref|NM_001012320.1| Homo sapiens zinc finger protein 302 (ZNF302), transcript variant 2,
            mRNA
          Length = 2642

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2193 tccaagtgcatcccttatt 2211
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>ref|NM_018443.2| Homo sapiens zinc finger protein 302 (ZNF302), transcript variant 1,
            mRNA
          Length = 2665

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2216 tccaagtgcatcccttatt 2234
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>gb|AC123683.6| Mus musculus chromosome 9, clone RP23-296I6, complete sequence
          Length = 189100

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 108    ttattggtgatgttgaagt 126
              |||||||||||||||||||
Sbjct: 106201 ttattggtgatgttgaagt 106183
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>gb|AY500357.1| Homo sapiens zinc finger protein 17 (HZF17) mRNA, partial cds
          Length = 1546

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 1474 tccaagtgcatcccttatt 1492
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>ref|XM_764040.1| Giardia lamblia ATCC 50803 variant-specific surface protein
           (GLP_542_48852_47683) partial mRNA
          Length = 1170

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   gaactacttcttccacgag 19
           |||||||||||||||||||
Sbjct: 330 gaactacttcttccacgag 348
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>gb|AY152828.1| Felis catus clone PAC f20 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 87684

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   ggaaaagggtcttcaattt 146
             |||||||||||||||||||
Sbjct: 33885 ggaaaagggtcttcaattt 33867
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>emb|AL834318.1|HSM805362 Homo sapiens mRNA; cDNA DKFZp434M147 (from clone DKFZp434M147)
          Length = 2717

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2193 tccaagtgcatcccttatt 2211
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>dbj|AK131278.1| Homo sapiens cDNA FLJ16225 fis, clone DFNES2011192, highly  similar
            to Homo sapiens ZNF140-like transcription factor mRNA
          Length = 2635

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2293 tccaagtgcatcccttatt 2311
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>emb|CR621737.1| full-length cDNA clone CS0DF013YG16 of Fetal brain of Homo sapiens
            (human)
          Length = 2420

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2027 tccaagtgcatcccttatt 2045
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>dbj|AK122855.1| Homo sapiens cDNA FLJ16476 fis, clone BRSSN2017530, highly  similar
            to Homo sapiens zinc finger protein 302 (ZNF302)
          Length = 3839

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 3438 tccaagtgcatcccttatt 3456
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>dbj|AK074901.1| Homo sapiens cDNA FLJ90420 fis, clone NT2RP3000232, weakly similar to
            ZINC FINGER PROTEIN 184
          Length = 2590

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2189 tccaagtgcatcccttatt 2207
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>emb|CR596326.1| full-length cDNA clone CS0DF025YD22 of Fetal brain of Homo sapiens
           (human)
          Length = 1541

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 94  tccaagtgcatcccttatt 112
           |||||||||||||||||||
Sbjct: 552 tccaagtgcatcccttatt 570
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>gb|AC092325.2| Homo sapiens chromosome 16 clone RP11-14K3, complete sequence
          Length = 153629

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    tgcatcccttattggtgat 118
              |||||||||||||||||||
Sbjct: 105548 tgcatcccttattggtgat 105566
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>gb|AC022143.7| Homo sapiens chromosome 19 clone CTD-2378H7, complete sequence
          Length = 109378

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    tccaagtgcatcccttatt 112
             |||||||||||||||||||
Sbjct: 28586 tccaagtgcatcccttatt 28568
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>gb|AF410771.1|AF410771 Homo sapiens C1q-related factor (CRF) gene, complete cds
          Length = 10184

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 100  tgcatcccttattggtgat 118
            |||||||||||||||||||
Sbjct: 3865 tgcatcccttattggtgat 3847
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                      
Query: 24      tttcaaggcatcgcacacttatgaacatctttgacaaag 62
               ||||||||||||||||  | |||||||| ||||| ||||
Sbjct: 3549282 tttcaaggcatcgcacgatcatgaacatatttgagaaag 3549320
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>gb|AF326206.1|AF326206 Homo sapiens ZNF140-like transcription factor mRNA, complete cds
          Length = 2741

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2291 tccaagtgcatcccttatt 2309
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>gb|AC020910.7| Homo sapiens chromosome 19 clone CTD-2553L13, complete sequence
          Length = 203201

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    tccaagtgcatcccttatt 112
             |||||||||||||||||||
Sbjct: 87845 tccaagtgcatcccttatt 87863
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>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence
          Length = 229472

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 210860 tctttgacaaagcccctca 210878



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 95677 tctttgacaaagcccctca 95695



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 57474 tctttgacaaagcccctca 57456
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>gb|AC008747.5|AC008747 Homo sapiens chromosome 19 clone CTD-2588C8, complete sequence
          Length = 159597

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 94     tccaagtgcatcccttatt 112
              |||||||||||||||||||
Sbjct: 140548 tccaagtgcatcccttatt 140530
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>gb|AC015936.14| Homo sapiens chromosome 17, clone CTD-2534I21, complete sequence
          Length = 203401

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    tgcatcccttattggtgat 118
              |||||||||||||||||||
Sbjct: 140199 tgcatcccttattggtgat 140217
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>gb|DQ071615.1| Bat SARS coronavirus Rp3, complete genome
          Length = 29736

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 132   aagggtcttcaatttggta 150
             |||||||||||||||||||
Sbjct: 27840 aagggtcttcaatttggta 27822
to top
>gb|AF265236.1|AF265236 Homo sapiens ZNF135-like protein mRNA, complete cds
          Length = 2978

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2528 tccaagtgcatcccttatt 2546
to top
>gb|AF155656.1|AF155656 Homo sapiens zinc finger protein ZNF140-like protein mRNA, complete
            cds
          Length = 2642

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 2192 tccaagtgcatcccttatt 2210
to top
>ref|XM_312882.2| Anopheles gambiae str. PEST ENSANGP00000014729
           (ENSANGG00000012240), partial mRNA
          Length = 1521

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 6   acttcttccacgagcagat 24
           |||||||||||||||||||
Sbjct: 287 acttcttccacgagcagat 305
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                      
Query: 24      tttcaaggcatcgcacacttatgaacatctttgacaaag 62
               ||||||||||||||||  | |||||||| ||||| ||||
Sbjct: 3549227 tttcaaggcatcgcacgatcatgaacatatttgagaaag 3549265
to top
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103647

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                    
Query: 24    tttcaaggcatcgcacacttatgaacatctttgacaaag 62
             ||||||||||||||||  | |||||||| ||||| ||||
Sbjct: 64210 tttcaaggcatcgcacgatcatgaacatatttgagaaag 64248
to top
>gb|AC132444.3| Mus musculus BAC clone RP23-160D6 from 8, complete sequence
          Length = 206961

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 123146 tctttgacaaagcccctca 123128



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 55744 tctttgacaaagcccctca 55726
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>gb|AC131696.4| Mus musculus BAC clone RP23-403E5 from 1, complete sequence
          Length = 214068

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 90319 tctttgacaaagcccctca 90301



 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 48287 tctttgacaaagcccctca 48269
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>gb|AC168977.6| Mus musculus chromosome 1, clone RP23-285N8, complete sequence
          Length = 153618

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    tctttgacaaagcccctca 69
             |||||||||||||||||||
Sbjct: 86087 tctttgacaaagcccctca 86105
to top
>emb|AL162002.1|HSM802518 Homo sapiens mRNA; cDNA DKFZp434I0114 (from clone DKFZp434I0114)
          Length = 1062

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 94  tccaagtgcatcccttatt 112
           |||||||||||||||||||
Sbjct: 579 tccaagtgcatcccttatt 597
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>gb|AC167036.6| Mus musculus chromosome 1, clone RP23-76P9, complete sequence
          Length = 250160

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     tctttgacaaagcccctca 69
              |||||||||||||||||||
Sbjct: 212164 tctttgacaaagcccctca 212182
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>emb|AL833690.1|HSM805003 Homo sapiens mRNA; cDNA DKFZp667K228 (from clone DKFZp667K228)
          Length = 1944

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 94   tccaagtgcatcccttatt 112
            |||||||||||||||||||
Sbjct: 1523 tccaagtgcatcccttatt 1541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,172,251
Number of Sequences: 3902068
Number of extensions: 1172251
Number of successful extensions: 88769
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88590
Number of HSP's gapped (non-prelim): 179
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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