ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17c23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK122124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 394 e-106
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
3dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
4dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
5dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
6gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, comp... 46 0.12
7gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone ... 46 0.12
8emb|CR858609.1| Pongo pygmaeus mRNA; cDNA DKFZp469C198 (from clo... 44 0.48
9gb|BC068446.1| Homo sapiens UDP glycosyltransferase 3 family, po... 44 0.48
10dbj|AK125803.1| Homo sapiens cDNA FLJ43815 fis, clone TESTI4001527 44 0.48
11dbj|AK091977.1| Homo sapiens cDNA FLJ34658 fis, clone KIDNE20186... 44 0.48
12gb|AC008860.7| Homo sapiens chromosome 5 clone CTD-2185A1, compl... 44 0.48
13dbj|AB169104.1| Macaca fascicularis testis cDNA, clone: QtsA-171... 44 0.48
14gb|AC016612.6| Homo sapiens chromosome 5 clone CTD-2197M16, comp... 44 0.48
15gb|AC112204.2| Homo sapiens chromosome 5 clone RP11-79C6, comple... 44 0.48
16emb|CR854896.11| Zebrafish DNA sequence from clone DKEY-239B8 in... 42 1.9
17gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K3 map... 42 1.9
18gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome... 40 7.6
19gb|BC043756.1| Xenopus laevis fatty acid Coenzyme A ligase, mRNA... 40 7.6
20emb|AL590103.12| Human DNA sequence from clone RP11-132G19 on ch... 40 7.6
21emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chr... 40 7.6
22emb|AL645969.20| Mouse DNA sequence from clone RP23-101H2 on chr... 40 7.6
23gb|AC148407.2| Xenopus tropicalisBAC clone ISB1-124I14 containin... 40 7.6
24gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Cl... 40 7.6
25dbj|AK125352.1| Homo sapiens cDNA FLJ43362 fis, clone NT2RP7017365 40 7.6
26gb|AC152825.4| Mus musculus BAC clone RP24-135P4 from chromosome... 40 7.6
27ref|NM_001019542.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.6
28dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
29dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
30dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
31emb|CR628364.5| Zebrafish DNA sequence from clone DKEY-179O20 in... 40 7.6
32emb|Z81317.1|SPAC6G9 S.pombe chromosome I cosmid c6G9 40 7.6
33emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 ... 40 7.6
34emb|CT737398.2| Pan troglodytes chromosome X clone CH251-344H20 ... 40 7.6
35gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence 40 7.6
36gb|BC108787.1| Xenopus laevis cDNA clone MGC:132122 IMAGE:508551... 40 7.6
37emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-9... 40 7.6
38emb|AL713883.1|CNS07YP0 Mus musculus chromosome 11 region in the... 40 7.6
39emb|AL808111.4| Mouse DNA sequence from clone RP23-355J9 on chro... 40 7.6
40emb|AL713880.1|CNS07YOW Mus musculus chromosome 11 region in the... 40 7.6 
>dbj|AK122124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131O18, full
            insert sequence
          Length = 3794

 Score =  394 bits (199), Expect = e-106
 Identities = 468/556 (84%), Gaps = 4/556 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttttcccttgcagnaatgtgtccaaggtcatttcacccagcttgcgttgggctgcctgta 60
            ||||||||||||  |||||| |||||||||||||||||||| || || |||||| ||| |
Sbjct: 2239 ttttcccttgca-aaatgtgcccaaggtcatttcacccagcctgtgtagggctgtctgga 2297

                                                                        
Query: 61   gttccctcggaggagtggttttgtgataactgtaccatcctcgttcaaaaagaaaaggct 120
            || ||||| |||   |||| ||||||||| || | || ||| |||||||| |||||||||
Sbjct: 2298 gtcccctcagag---tggtattgtgataattgcagcaaccttgttcaaaaggaaaaggct 2354

                                                                        
Query: 121  ttagcagcaaataagaatgccaaggctgctggaaggcaggctggagtcgattctattgag 180
            ||||||| |||||| ||||| || |||||||||||||| |||||||| ||||||||||| 
Sbjct: 2355 ttagcagaaaataaaaatgctaaagctgctggaaggcaagctggagttgattctattgaa 2414

                                                                        
Query: 181  cagattttgaagagagctattagaatcgtcccaatctgtgatgaccttggagggtgcgcc 240
            |||||  |||||||||||||  | || |||||||||| |||||||||||| ||||| |||
Sbjct: 2415 cagataatgaagagagctatacggattgtcccaatctctgatgaccttggtgggtgtgcc 2474

                                                                        
Query: 241  ttatgcaagaaaaaggattttaacaatgcagtatttgatgagcgcactgtgatactctgt 300
             |||||||| | || |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2475 ctatgcaagcagaaagattttaacaattcagtatttgatgagcgcactgtgatactctgt 2534

                                                                        
Query: 301  gatcaatgcgagaaagaataccatgtaggatgtttgaggagtgaatggcaggtcgacctg 360
            || ||||| |||||||| || ||||| || |||||| ||||  | ||||| || ||||||
Sbjct: 2535 gaccaatgtgagaaagagtatcatgttgggtgtttgcggagccagtggcaagttgacctg 2594

                                                                        
Query: 361  aaggaattaccagaaggggagtggttctgttgtgatagttgctctgagatacgctcctct 420
            ||||||||||||||||||||||||||||||||| |||||||||| ||||| || || || 
Sbjct: 2595 aaggaattaccagaaggggagtggttctgttgtaatagttgctcagagattcgttcttcc 2654

                                                                        
Query: 421  ttggacaagatgatttctgaaggagctcaccctttgtcggagtcagacgttgatatcata 480
            ||||||||||| || ||||| ||||||     |||| | ||||||||  |||||||||||
Sbjct: 2655 ttggacaagataatctctgatggagctttgattttggctgagtcagatattgatatcata 2714

                                                                        
Query: 481  agaaagaaacacgagtcaaaaggtttggtcatggacgccaatacagagatcagatggcaa 540
            || |||||||| |||   ||||| ||   ||||||| | ||||||||  | ||||||| |
Sbjct: 2715 aggaagaaacatgagatgaaagggttaagcatggacactaatacagatctgagatggcga 2774

                            
Query: 541  ttggttgctggtagaa 556
            ||  ||||||||||||
Sbjct: 2775 ttacttgctggtagaa 2790
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  161 bits (81), Expect = 3e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                          
Query: 73     gagtggttttgtgataactgtaccatcctcgttcaaaaagaaaaggctttagcagcaaat 132
              ||||||| ||||||||| || | || ||| |||||||| |||||||||||||||| ||||
Sbjct: 133992 gagtggtattgtgataattgcagcaaccttgttcaaaaggaaaaggctttagcagaaaat 134051

                                                                          
Query: 133    aagaatgccaaggctgctggaaggcaggctggagtcgattctattgagcagattttgaag 192
              || ||||| || |||||||||||||| |||||||| ||||||||||| |||||  |||||
Sbjct: 134052 aaaaatgctaaagctgctggaaggcaagctggagttgattctattgaacagataatgaag 134111

                                                                       
Query: 193    agagctattagaatcgtcccaatctgtgatgaccttggagggtgcgccttatgcaag 249
              ||||||||  | || |||||||||| |||||||||||| ||||| ||| ||||||||
Sbjct: 134112 agagctatacggattgtcccaatctctgatgaccttggtgggtgtgccctatgcaag 134168



 Score =  109 bits (55), Expect = 1e-20
 Identities = 160/195 (82%)
 Strand = Plus / Plus

                                                                          
Query: 362    aggaattaccagaaggggagtggttctgttgtgatagttgctctgagatacgctcctctt 421
              |||||||||||||||||||||||||||||||| |||||||||| ||||| || || || |
Sbjct: 135361 aggaattaccagaaggggagtggttctgttgtaatagttgctcagagattcgttcttcct 135420

                                                                          
Query: 422    tggacaagatgatttctgaaggagctcaccctttgtcggagtcagacgttgatatcataa 481
              |||||||||| || ||||| ||||||     |||| | ||||||||  ||||||||||||
Sbjct: 135421 tggacaagataatctctgatggagctttgattttggctgagtcagatattgatatcataa 135480

                                                                          
Query: 482    gaaagaaacacgagtcaaaaggtttggtcatggacgccaatacagagatcagatggcaat 541
              | |||||||| |||   ||||| ||   ||||||| | ||||||||  | ||||||| ||
Sbjct: 135481 ggaagaaacatgagatgaaagggttaagcatggacactaatacagatctgagatggcgat 135540

                             
Query: 542    tggttgctggtagaa 556
              |  ||||||||||||
Sbjct: 135541 tacttgctggtagaa 135555



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                             
Query: 256    gattttaacaatgcagtatttgatgagcgcactgtgatactctgtga 302
              |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 134996 gattttaacaattcagtatttgatgagcgcactgtgatactctgtga 135042



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                      
Query: 1      ttttcccttgcagnaatgtgtccaaggtcatttcacccag 40
              ||||||||||||  |||||| |||||||||||||||||||
Sbjct: 133799 ttttcccttgca-aaatgtgcccaaggtcatttcacccag 133837
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>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1460A05
          Length = 143371

 Score =  161 bits (81), Expect = 3e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                          
Query: 73     gagtggttttgtgataactgtaccatcctcgttcaaaaagaaaaggctttagcagcaaat 132
              ||||||| ||||||||| || | || ||| |||||||| |||||||||||||||| ||||
Sbjct: 133992 gagtggtattgtgataattgcagcaaccttgttcaaaaggaaaaggctttagcagaaaat 134051

                                                                          
Query: 133    aagaatgccaaggctgctggaaggcaggctggagtcgattctattgagcagattttgaag 192
              || ||||| || |||||||||||||| |||||||| ||||||||||| |||||  |||||
Sbjct: 134052 aaaaatgctaaagctgctggaaggcaagctggagttgattctattgaacagataatgaag 134111

                                                                       
Query: 193    agagctattagaatcgtcccaatctgtgatgaccttggagggtgcgccttatgcaag 249
              ||||||||  | || |||||||||| |||||||||||| ||||| ||| ||||||||
Sbjct: 134112 agagctatacggattgtcccaatctctgatgaccttggtgggtgtgccctatgcaag 134168



 Score =  109 bits (55), Expect = 1e-20
 Identities = 160/195 (82%)
 Strand = Plus / Plus

                                                                          
Query: 362    aggaattaccagaaggggagtggttctgttgtgatagttgctctgagatacgctcctctt 421
              |||||||||||||||||||||||||||||||| |||||||||| ||||| || || || |
Sbjct: 135361 aggaattaccagaaggggagtggttctgttgtaatagttgctcagagattcgttcttcct 135420

                                                                          
Query: 422    tggacaagatgatttctgaaggagctcaccctttgtcggagtcagacgttgatatcataa 481
              |||||||||| || ||||| ||||||     |||| | ||||||||  ||||||||||||
Sbjct: 135421 tggacaagataatctctgatggagctttgattttggctgagtcagatattgatatcataa 135480

                                                                          
Query: 482    gaaagaaacacgagtcaaaaggtttggtcatggacgccaatacagagatcagatggcaat 541
              | |||||||| |||   ||||| ||   ||||||| | ||||||||  | ||||||| ||
Sbjct: 135481 ggaagaaacatgagatgaaagggttaagcatggacactaatacagatctgagatggcgat 135540

                             
Query: 542    tggttgctggtagaa 556
              |  ||||||||||||
Sbjct: 135541 tacttgctggtagaa 135555



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 46/47 (97%)
 Strand = Plus / Plus

                                                             
Query: 256    gattttaacaatgcagtatttgatgagcgcactgtgatactctgtga 302
              |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 134996 gattttaacaattcagtatttgatgagcgcactgtgatactctgtga 135042



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Plus

                                                      
Query: 1      ttttcccttgcagnaatgtgtccaaggtcatttcacccag 40
              ||||||||||||  |||||| |||||||||||||||||||
Sbjct: 133799 ttttcccttgca-aaatgtgcccaaggtcatttcacccag 133837
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>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0681G01, complete sequence
          Length = 184118

 Score =  161 bits (81), Expect = 3e-36
 Identities = 153/177 (86%)
 Strand = Plus / Minus

                                                                         
Query: 73    gagtggttttgtgataactgtaccatcctcgttcaaaaagaaaaggctttagcagcaaat 132
             ||||||| ||||||||| || | || ||| |||||||| |||||||||||||||| ||||
Sbjct: 86550 gagtggtattgtgataattgcagcaaccttgttcaaaaggaaaaggctttagcagaaaat 86491

                                                                         
Query: 133   aagaatgccaaggctgctggaaggcaggctggagtcgattctattgagcagattttgaag 192
             || ||||| || |||||||||||||| |||||||| ||||||||||| |||||  |||||
Sbjct: 86490 aaaaatgctaaagctgctggaaggcaagctggagttgattctattgaacagataatgaag 86431

                                                                      
Query: 193   agagctattagaatcgtcccaatctgtgatgaccttggagggtgcgccttatgcaag 249
             ||||||||  | || |||||||||| |||||||||||| ||||| ||| ||||||||
Sbjct: 86430 agagctatacggattgtcccaatctctgatgaccttggtgggtgtgccctatgcaag 86374



 Score =  109 bits (55), Expect = 1e-20
 Identities = 160/195 (82%)
 Strand = Plus / Minus

                                                                         
Query: 362   aggaattaccagaaggggagtggttctgttgtgatagttgctctgagatacgctcctctt 421
             |||||||||||||||||||||||||||||||| |||||||||| ||||| || || || |
Sbjct: 85181 aggaattaccagaaggggagtggttctgttgtaatagttgctcagagattcgttcttcct 85122

                                                                         
Query: 422   tggacaagatgatttctgaaggagctcaccctttgtcggagtcagacgttgatatcataa 481
             |||||||||| || ||||| ||||||     |||| | ||||||||  ||||||||||||
Sbjct: 85121 tggacaagataatctctgatggagctttgattttggctgagtcagatattgatatcataa 85062

                                                                         
Query: 482   gaaagaaacacgagtcaaaaggtttggtcatggacgccaatacagagatcagatggcaat 541
             | |||||||| |||   ||||| ||   ||||||| | ||||||||  | ||||||| ||
Sbjct: 85061 ggaagaaacatgagatgaaagggttaagcatggacactaatacagatctgagatggcgat 85002

                            
Query: 542   tggttgctggtagaa 556
             |  ||||||||||||
Sbjct: 85001 tacttgctggtagaa 84987



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 46/47 (97%)
 Strand = Plus / Minus

                                                            
Query: 256   gattttaacaatgcagtatttgatgagcgcactgtgatactctgtga 302
             |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 85546 gattttaacaattcagtatttgatgagcgcactgtgatactctgtga 85500



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/40 (92%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                     
Query: 1     ttttcccttgcagnaatgtgtccaaggtcatttcacccag 40
             ||||||||||||  |||||| |||||||||||||||||||
Sbjct: 86743 ttttcccttgca-aaatgtgcccaaggtcatttcacccag 86705
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           BAC clone:OSJNBa0075G19
          Length = 163558

 Score =  109 bits (55), Expect = 1e-20
 Identities = 160/195 (82%)
 Strand = Plus / Plus

                                                                       
Query: 362 aggaattaccagaaggggagtggttctgttgtgatagttgctctgagatacgctcctctt 421
           |||||||||||||||||||||||||||||||| |||||||||| ||||| || || || |
Sbjct: 257 aggaattaccagaaggggagtggttctgttgtaatagttgctcagagattcgttcttcct 316

                                                                       
Query: 422 tggacaagatgatttctgaaggagctcaccctttgtcggagtcagacgttgatatcataa 481
           |||||||||| || ||||| ||||||     |||| | ||||||||  ||||||||||||
Sbjct: 317 tggacaagataatctctgatggagctttgattttggctgagtcagatattgatatcataa 376

                                                                       
Query: 482 gaaagaaacacgagtcaaaaggtttggtcatggacgccaatacagagatcagatggcaat 541
           | |||||||| |||   ||||| ||   ||||||| | ||||||||  | ||||||| ||
Sbjct: 377 ggaagaaacatgagatgaaagggttaagcatggacactaatacagatctgagatggcgat 436

                          
Query: 542 tggttgctggtagaa 556
           |  ||||||||||||
Sbjct: 437 tacttgctggtagaa 451
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>gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, complete sequence
          Length = 170951

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 420   tttggacaagatgatttctgaag 442
             |||||||||||||||||||||||
Sbjct: 92336 tttggacaagatgatttctgaag 92358
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>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete
             sequence
          Length = 228147

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 420   tttggacaagatgatttctgaag 442
             |||||||||||||||||||||||
Sbjct: 95172 tttggacaagatgatttctgaag 95150
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>emb|CR858609.1| Pongo pygmaeus mRNA; cDNA DKFZp469C198 (from clone DKFZp469C198)
          Length = 5012

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 137  atgccaaggctgctggaaggca 158
            ||||||||||||||||||||||
Sbjct: 1687 atgccaaggctgctggaaggca 1666
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>gb|BC068446.1| Homo sapiens UDP glycosyltransferase 3 family, polypeptide A1, mRNA
            (cDNA clone MGC:86988 IMAGE:5295502), complete cds
          Length = 2759

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 137  atgccaaggctgctggaaggca 158
            ||||||||||||||||||||||
Sbjct: 1503 atgccaaggctgctggaaggca 1482
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>dbj|AK125803.1| Homo sapiens cDNA FLJ43815 fis, clone TESTI4001527
          Length = 5002

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 137  atgccaaggctgctggaaggca 158
            ||||||||||||||||||||||
Sbjct: 3779 atgccaaggctgctggaaggca 3758
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>dbj|AK091977.1| Homo sapiens cDNA FLJ34658 fis, clone KIDNE2018617, weakly similar
           to UDP-GLUCURONOSYLTRANSFERASE 2B13 PRECURSOR,
           MICROSOMAL (EC 2.4.1.17)
          Length = 1842

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 137 atgccaaggctgctggaaggca 158
           ||||||||||||||||||||||
Sbjct: 619 atgccaaggctgctggaaggca 598
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>gb|AC008860.7| Homo sapiens chromosome 5 clone CTD-2185A1, complete sequence
          Length = 105885

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 137   atgccaaggctgctggaaggca 158
             ||||||||||||||||||||||
Sbjct: 26346 atgccaaggctgctggaaggca 26325
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>dbj|AB169104.1| Macaca fascicularis testis cDNA, clone: QtsA-17196, similar to human
            hypothetical protein FLJ34658 (FLJ34658), mRNA, RefSeq:
            NM_152404.2
          Length = 2115

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 137  atgccaaggctgctggaaggca 158
            ||||||||||||||||||||||
Sbjct: 1293 atgccaaggctgctggaaggca 1272
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>gb|AC016612.6| Homo sapiens chromosome 5 clone CTD-2197M16, complete sequence
          Length = 179513

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 137    atgccaaggctgctggaaggca 158
              ||||||||||||||||||||||
Sbjct: 129729 atgccaaggctgctggaaggca 129708
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>gb|AC112204.2| Homo sapiens chromosome 5 clone RP11-79C6, complete sequence
          Length = 165304

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 137    atgccaaggctgctggaaggca 158
              ||||||||||||||||||||||
Sbjct: 164271 atgccaaggctgctggaaggca 164292
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>emb|CR854896.11| Zebrafish DNA sequence from clone DKEY-239B8 in linkage group 13,
             complete sequence
          Length = 165556

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 170   attctattgagcagattttga 190
             |||||||||||||||||||||
Sbjct: 46714 attctattgagcagattttga 46734
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>gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K3 map g6825, complete
             sequence
          Length = 92376

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 248   agaaaaaggattttaacaatgcagt 272
             ||||||||||||| |||||||||||
Sbjct: 17034 agaaaaaggatttgaacaatgcagt 17058
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>gb|AC140199.2| Mus musculus BAC clone RP23-480D7 from chromosome 9, complete sequence
          Length = 170896

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 247    aagaaaaaggattttaacaatgcagtatttga 278
              ||||||||||||||| || |||||||||||||
Sbjct: 167021 aagaaaaaggattttgac-atgcagtatttga 166991
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>gb|BC043756.1| Xenopus laevis fatty acid Coenzyme A ligase, mRNA (cDNA clone
            MGC:52902 IMAGE:4889339), complete cds
          Length = 2818

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 241  ttatgcaagaaaaaggattttaacaatgcagt 272
            |||||||| || ||||||||||| ||||||||
Sbjct: 1892 ttatgcaaaaacaaggattttaaaaatgcagt 1923
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>emb|AL590103.12| Human DNA sequence from clone RP11-132G19 on chromosome 1 Contains a
             novel gene, the 3' end of the HSPG2 gene for  heparan
             sulfate proteoglycan 2 (perlecan), the 5' end of the
             USP31 gene for ubiquitin specific protease 31 and a CpG
             island, complete sequence
          Length = 175162

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   ttcaaaaagaaaaggcttta 123
             ||||||||||||||||||||
Sbjct: 14595 ttcaaaaagaaaaggcttta 14614
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>emb|AL603711.6| Mouse DNA sequence from clone RP23-381B19 on chromosome 11 Contains the
             3' end of the Slfn3 gene for schlafen 3, a novel gene, two
             schlafen (Slfn) pseudogenes, the Pex12 gene for
             peroxisomal biogenesis factor 12 and the Ap2b1 gene for
             adaptor-related protein complex 2 beta 1 subunit, complete
             sequence
          Length = 204523

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   aaagaataccatgtaggatg 332
             ||||||||||||||||||||
Sbjct: 98841 aaagaataccatgtaggatg 98860
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>emb|AL645969.20| Mouse DNA sequence from clone RP23-101H2 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 154687

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   ttcaaaaagaaaaggctttagcag 127
             |||||||||||||||||| |||||
Sbjct: 10894 ttcaaaaagaaaaggcttaagcag 10917
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>gb|AC148407.2| Xenopus tropicalisBAC clone ISB1-124I14 containing the sox11 gene,
             complete cds, complete sequence
          Length = 85265

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   aaaaagaaaaggctttagca 126
             ||||||||||||||||||||
Sbjct: 40880 aaaaagaaaaggctttagca 40899
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>gb|AC124036.5| Mus Musculus Strain C57BL6/J chromosome 11 BAC Clone RP24-100D7,
             Complete Sequence, complete sequence
          Length = 228907

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   aaagaataccatgtaggatg 332
             ||||||||||||||||||||
Sbjct: 53507 aaagaataccatgtaggatg 53488
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>dbj|AK125352.1| Homo sapiens cDNA FLJ43362 fis, clone NT2RP7017365
          Length = 1921

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 ttcaaaaagaaaaggcttta 123
           ||||||||||||||||||||
Sbjct: 18  ttcaaaaagaaaaggcttta 37
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>gb|AC152825.4| Mus musculus BAC clone RP24-135P4 from chromosome 9, complete sequence
          Length = 140471

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 247   aagaaaaaggattttaacaatgcagtatttga 278
             ||||||||||||||| || |||||||||||||
Sbjct: 51294 aagaaaaaggattttgac-atgcagtatttga 51264
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>ref|NM_001019542.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC6G9.09c),
           partial mRNA
          Length = 450

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 132 taagaatgccaaggctgctg 151
           ||||||||||||||||||||
Sbjct: 420 taagaatgccaaggctgctg 439
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 257     attttaacaatgcagtattt 276
               ||||||||||||||||||||
Sbjct: 7118178 attttaacaatgcagtattt 7118197
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>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   attttaacaatgcagtattt 276
             ||||||||||||||||||||
Sbjct: 12826 attttaacaatgcagtattt 12845
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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0452F10
          Length = 145120

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    attttaacaatgcagtattt 276
              ||||||||||||||||||||
Sbjct: 105758 attttaacaatgcagtattt 105777
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>emb|CR628364.5| Zebrafish DNA sequence from clone DKEY-179O20 in linkage group 19,
            complete sequence
          Length = 15899

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 252  aaaggattttaacaatgcagtatt 275
            |||| |||||||||||||||||||
Sbjct: 5665 aaagcattttaacaatgcagtatt 5688
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>emb|Z81317.1|SPAC6G9 S.pombe chromosome I cosmid c6G9
          Length = 39187

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   taagaatgccaaggctgctg 151
             ||||||||||||||||||||
Sbjct: 20029 taagaatgccaaggctgctg 20010
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>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4,
              complete sequence
          Length = 200352

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    attttaacaatgcagtattt 276
              ||||||||||||||||||||
Sbjct: 189379 attttaacaatgcagtattt 189360
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>emb|CT737398.2| Pan troglodytes chromosome X clone CH251-344H20 map Xq28, complete
              sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    ttcaaaaagaaaaggcttta 123
              ||||||||||||||||||||
Sbjct: 131021 ttcaaaaagaaaaggcttta 131040
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>gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence
          Length = 155021

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 334    ttgaggagtgaatggcaggt 353
              ||||||||||||||||||||
Sbjct: 110500 ttgaggagtgaatggcaggt 110519
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>gb|BC108787.1| Xenopus laevis cDNA clone MGC:132122 IMAGE:5085511, complete cds
          Length = 2809

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 241  ttatgcaagaaaaaggattttaacaatgcagt 272
            |||||||| || ||||||||||| ||||||||
Sbjct: 1887 ttatgcaaaaacaaggattttaaaaatgcagt 1918
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>emb|AL390254.6|CNS06C7M Human chromosome 14 DNA sequence BAC R-991C1 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177792

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   tttgaggagtgaatggcagg 352
             ||||||||||||||||||||
Sbjct: 50813 tttgaggagtgaatggcagg 50832
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>emb|AL713883.1|CNS07YP0 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
              clone 179H3 of library Caltech CITB-BAC from chromosome 11
              of Mus musculus (mouse)
          Length = 168835

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    aaagaataccatgtaggatg 332
              ||||||||||||||||||||
Sbjct: 111112 aaagaataccatgtaggatg 111093
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>emb|AL808111.4| Mouse DNA sequence from clone RP23-355J9 on chromosome X, complete
             sequence
          Length = 199724

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    aatgtgtccaaggtcatttcaccc 38
             |||||||||||||| |||||||||
Sbjct: 55566 aatgtgtccaaggttatttcaccc 55589
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>emb|AL713880.1|CNS07YOW Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 366M1 of library Caltech CITB-BAC from chromosome 11
             of Mus musculus (mouse)
          Length = 111702

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   ttcaaaaagaaaaggctttagcag 127
             |||||||||||||||||| |||||
Sbjct: 47402 ttcaaaaagaaaaggcttaagcag 47425


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,271,042
Number of Sequences: 3902068
Number of extensions: 6271042
Number of successful extensions: 96143
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 95982
Number of HSP's gapped (non-prelim): 157
length of query: 557
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 534
effective length of database: 17,143,297,704
effective search space: 9154520973936
effective search space used: 9154520973936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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