ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd17c19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493864.1| Oryza sativa (japonica cultivar-group), predic... 226 4e-56
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 226 4e-56
3dbj|AK067481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 4e-56
4gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 226 4e-56
5gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 226 4e-56
6gb|AY104997.1| Zea mays PCO079200 mRNA sequence 216 4e-53
7dbj|AK059567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 6e-49
8gb|AY212800.1| Uncultured bacterium clone XIVA3 Uvs061 (uvs061),... 48 0.021
9gb|AY190738.1| Pagrus major 40S ribosomal protein S18 mRNA, part... 44 0.32
10gb|BC079336.1| Rattus norvegicus similar to hypothetical protein... 44 0.32
11ref|NM_001014191.1| Rattus norvegicus similar to hypothetical pr... 44 0.32
12ref|XM_482939.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
13gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, comp... 42 1.3
14emb|X68078.1|NTRPCL28 N.tabacum mRNA for chloroplast ribosomal p... 42 1.3
15gb|AC009108.10| Homo sapiens chromosome 16 clone RP11-463O9, com... 42 1.3
16gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome... 42 1.3
17emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 o... 42 1.3
18gb|AC150480.3| Rhinolophus ferrumequinum clone VMRC7-380O7, comp... 42 1.3
19emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 42 1.3
20dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 42 1.3
21gb|AC023080.6| Homo sapiens chromosome 11, clone RP11-397M16, co... 42 1.3
22gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.3
23gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.3
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
25dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26gb|AC004086.14| Homo sapiens 12 PAC RP3-329E11 (Roswell Park Can... 42 1.3
27gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 42 1.3
28gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete c... 42 1.3
29dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.3
31dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.3
32dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
33emb|Y00142.1|SLXP55 Streptomyces lividans DNA for xp55 protein a... 42 1.3
34gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete... 42 1.3
35emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chr... 42 1.3
36gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosom... 42 1.3
37dbj|AP002075.3| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 42 1.3
38gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, c... 40 5.0
39gb|AC159205.2| Mus musculus BAC clone RP23-233O17 from chromosom... 40 5.0
40ref|XM_421335.1| PREDICTED: Gallus gallus similar to KIAA1409 (L... 40 5.0
41gb|AC146698.10| Mus musculus chromosome 13, clone RP24-342B2, co... 40 5.0
42gb|AC116527.18| Mus musculus chromosome 16, clone RP24-354B8, co... 40 5.0
43ref|NM_001007254.1| Homo sapiens ATPase, H+ transporting, lysoso... 40 5.0
44ref|NM_001695.3| Homo sapiens ATPase, H+ transporting, lysosomal... 40 5.0
45gb|AC140201.3| Mus musculus BAC clone RP23-267F15 from chromosom... 40 5.0
46gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.0
47gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 5.0
48emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 5.0
49gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, comp... 40 5.0
50gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosom... 40 5.0
51gb|AC125088.4| Mus musculus BAC clone RP24-152J3 from chromosome... 40 5.0
52gb|BC045260.1| Xenopus laevis heterogeneous ribonuclear particle... 40 5.0
53gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, c... 40 5.0
54gb|AC113541.10| Mus musculus chromosome 5, clone RP23-185N2, com... 40 5.0
55emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chr... 40 5.0
56ref|NG_004051.1| Mus musculus immunoglobulin lambda chain comple... 40 5.0
57emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.0
58dbj|AK090702.1| Homo sapiens cDNA FLJ33383 fis, clone BRACE2006514 40 5.0
59gb|AC108683.2| Homo sapiens Xp BAC RP11-539J11 (Roswell Park Can... 40 5.0
60gb|AC116545.1| Homo sapiens X BAC CTD-2009P21 (CalTech Human BAC... 40 5.0
61gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, com... 40 5.0
62gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosom... 40 5.0
63gb|AC090058.21| Homo sapiens 12 BAC RP11-112N23 (Roswell Park Ca... 40 5.0
64emb|BX817300.1|CNS0ACFR Arabidopsis thaliana Full-length cDNA Co... 40 5.0
65gb|AC007500.7| Homo sapiens chromosome 16 clone RP11-545E2, comp... 40 5.0
66gb|AC155263.2| Mus musculus BAC clone RP23-415I11 from chromosom... 40 5.0
67gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21... 40 5.0
68dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf... 40 5.0
69dbj|BS000217.1| Pan troglodytes chromosome 22 clone:PTB-004I03, ... 40 5.0
70emb|BX648079.1|HSM808225 Homo sapiens mRNA; cDNA DKFZp686N08183 ... 40 5.0
71dbj|AP002040.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 5.0
72gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal pro... 40 5.0
73gb|AC007918.2|F28J9 Arabidopsis thaliana chromosome 1 BAC F28J9 ... 40 5.0
74gb|AY105324.1| Zea mays PCO143177 mRNA sequence 40 5.0
75dbj|AP000843.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.0
76dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.0
77gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.0
78emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chr... 40 5.0
79emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on ch... 40 5.0
80dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.0
81dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 5.0
82dbj|AP003029.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.0 
>ref|XM_493864.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 267

 Score =  226 bits (114), Expect = 4e-56
 Identities = 180/198 (90%), Gaps = 3/198 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggccaacaaggtgtccttctccaaccacaagnaccaagnaagcagcaatttgtgaacct 64
           |||| ||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||
Sbjct: 71  gggcgaacaaggtgtccttctcaaaccacaag-acgaag-aagcagcagtttgtgaacct 128

                                                                       
Query: 65  gcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctcaggctctccac 124
           ||||||||||||||||||||||||||  || ||||||| |||||||||  | ||||||||
Sbjct: 129 gcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccac 188

                                                                       
Query: 125 caaggccctcaagnacaatcgagaagcacggcctcgacgccgtcgccaagaaggccggca 184
           ||| ||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 189 caaagccctcaag-accatcgagaagcatggcctcgacgccgtcgccaaaaaggccggca 247

                             
Query: 185 tcgacctcaacaagaaat 202
           ||||||||||||||||||
Sbjct: 248 tcgacctcaacaagaaat 265
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score =  226 bits (114), Expect = 4e-56
 Identities = 180/198 (90%), Gaps = 3/198 (1%)
 Strand = Plus / Minus

                                                                         
Query: 5     gggccaacaaggtgtccttctccaaccacaagnaccaagnaagcagcaatttgtgaacct 64
             |||| ||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||
Sbjct: 66544 gggcgaacaaggtgtccttctcaaaccacaag-acgaag-aagcagcagtttgtgaacct 66487

                                                                         
Query: 65    gcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctcaggctctccac 124
             ||||||||||||||||||||||||||  || ||||||| |||||||||  | ||||||||
Sbjct: 66486 gcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccac 66427

                                                                         
Query: 125   caaggccctcaagnacaatcgagaagcacggcctcgacgccgtcgccaagaaggccggca 184
             ||| ||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 66426 caaagccctcaag-accatcgagaagcatggcctcgacgccgtcgccaaaaaggccggca 66368

                               
Query: 185   tcgacctcaacaagaaat 202
             ||||||||||||||||||
Sbjct: 66367 tcgacctcaacaagaaat 66350
to top
>dbj|AK067481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107H14, full
           insert sequence
          Length = 796

 Score =  226 bits (114), Expect = 4e-56
 Identities = 180/198 (90%), Gaps = 3/198 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggccaacaaggtgtccttctccaaccacaagnaccaagnaagcagcaatttgtgaacct 64
           |||| ||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||
Sbjct: 285 gggcgaacaaggtgtccttctcaaaccacaag-acgaag-aagcagcagtttgtgaacct 342

                                                                       
Query: 65  gcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctcaggctctccac 124
           ||||||||||||||||||||||||||  || ||||||| |||||||||  | ||||||||
Sbjct: 343 gcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccac 402

                                                                       
Query: 125 caaggccctcaagnacaatcgagaagcacggcctcgacgccgtcgccaagaaggccggca 184
           ||| ||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 403 caaagccctcaag-accatcgagaagcatggcctcgacgccgtcgccaaaaaggccggca 461

                             
Query: 185 tcgacctcaacaagaaat 202
           ||||||||||||||||||
Sbjct: 462 tcgacctcaacaagaaat 479
to top
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score =  226 bits (114), Expect = 4e-56
 Identities = 180/198 (90%), Gaps = 3/198 (1%)
 Strand = Plus / Minus

                                                                         
Query: 5     gggccaacaaggtgtccttctccaaccacaagnaccaagnaagcagcaatttgtgaacct 64
             |||| ||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||
Sbjct: 66544 gggcgaacaaggtgtccttctcaaaccacaag-acgaag-aagcagcagtttgtgaacct 66487

                                                                         
Query: 65    gcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctcaggctctccac 124
             ||||||||||||||||||||||||||  || ||||||| |||||||||  | ||||||||
Sbjct: 66486 gcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccac 66427

                                                                         
Query: 125   caaggccctcaagnacaatcgagaagcacggcctcgacgccgtcgccaagaaggccggca 184
             ||| ||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 66426 caaagccctcaag-accatcgagaagcatggcctcgacgccgtcgccaaaaaggccggca 66368

                               
Query: 185   tcgacctcaacaagaaat 202
             ||||||||||||||||||
Sbjct: 66367 tcgacctcaacaagaaat 66350
to top
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score =  226 bits (114), Expect = 4e-56
 Identities = 180/198 (90%), Gaps = 3/198 (1%)
 Strand = Plus / Minus

                                                                         
Query: 5     gggccaacaaggtgtccttctccaaccacaagnaccaagnaagcagcaatttgtgaacct 64
             |||| ||||||||||||||||| ||||||||| || ||| |||||||| |||||||||||
Sbjct: 75931 gggcgaacaaggtgtccttctcaaaccacaag-acgaag-aagcagcagtttgtgaacct 75874

                                                                         
Query: 65    gcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctcaggctctccac 124
             ||||||||||||||||||||||||||  || ||||||| |||||||||  | ||||||||
Sbjct: 75873 gcagtacaagaagctgtggtgggaggaaggcaagcgcttcgtcaagctgcgtctctccac 75814

                                                                         
Query: 125   caaggccctcaagnacaatcgagaagcacggcctcgacgccgtcgccaagaaggccggca 184
             ||| ||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 75813 caaagccctcaag-accatcgagaagcatggcctcgacgccgtcgccaaaaaggccggca 75755

                               
Query: 185   tcgacctcaacaagaaat 202
             ||||||||||||||||||
Sbjct: 75754 tcgacctcaacaagaaat 75737
to top
>gb|AY104997.1| Zea mays PCO079200 mRNA sequence
          Length = 593

 Score =  216 bits (109), Expect = 4e-53
 Identities = 184/205 (89%), Gaps = 3/205 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaccgggccaacaaggtgtccttctccaaccacaagnaccaagnaagcagcaatttgtga 60
           |||||||| ||||||||||| || |||||||||||| || ||| |||||||| || ||||
Sbjct: 278 aaccgggcgaacaaggtgtcgttttccaaccacaag-acgaag-aagcagcagttcgtga 335

                                                                       
Query: 61  acctgcagtacaagaagctgtggtgggaggccggaaagcgctacgtcaagctcaggctct 120
           |||||||||||||||||||||||||||||||||| ||||||| |||||||||  | || |
Sbjct: 336 acctgcagtacaagaagctgtggtgggaggccggcaagcgcttcgtcaagctgcgccttt 395

                                                                       
Query: 121 ccaccaaggccctcaagnacaatcgagaagcacggcctcgacgccgtcgccaagaaggcc 180
           ||||||||||||||||| || |||||||||||||||||||||||||||||    ||||||
Sbjct: 396 ccaccaaggccctcaag-accatcgagaagcacggcctcgacgccgtcgcgcgcaaggcc 454

                                    
Query: 181 ggcatcgacctcaacaagaaatgag 205
           |||||||||||||||||||| ||||
Sbjct: 455 ggcatcgacctcaacaagaagtgag 479
to top
>dbj|AK059567.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H10, full
           insert sequence
          Length = 487

 Score =  202 bits (102), Expect = 6e-49
 Identities = 145/158 (91%), Gaps = 1/158 (0%)
 Strand = Plus / Plus

                                                                       
Query: 45  aagcagcaatttgtgaacctgcagtacaagaagctgtggtgggaggccggaaagcgctac 104
           |||||||| |||||||||||||||||||||||||||||||||||||  || ||||||| |
Sbjct: 13  aagcagcagtttgtgaacctgcagtacaagaagctgtggtgggaggaaggcaagcgcttc 72

                                                                       
Query: 105 gtcaagctcaggctctccaccaaggccctcaagnacaatcgagaagcacggcctcgacgc 164
           ||||||||  | ||||||||||| ||||||||| || ||||||||||| |||||||||||
Sbjct: 73  gtcaagctgcgtctctccaccaaagccctcaag-accatcgagaagcatggcctcgacgc 131

                                                 
Query: 165 cgtcgccaagaaggccggcatcgacctcaacaagaaat 202
           ||||||||| ||||||||||||||||||||||||||||
Sbjct: 132 cgtcgccaaaaaggccggcatcgacctcaacaagaaat 169
to top
>gb|AY212800.1| Uncultured bacterium clone XIVA3 Uvs061 (uvs061), Uvs062 (uvs062),
             Uvs063 (uvs063), Uvs064 (uvs064), Uvs065 (uvs065), Uvs066
             (uvs066), Uvs067 (uvs067), Uvs068 (uvs068), Uvs069, ActP
             (actP), AguC (aguC), Uvs072 (uvs072), AguD (aguD), AguE
             (aguE), Uvs075 (uvs075), Uvs076 (uvs076), Uvs077 (uvs077),
             Uvs078 (uvs078), Uvs079 (uvs079), Uvs080 (uvs080), AguF
             (aguF), and Uvs082 (uvs082) genes, complete cds
          Length = 38120

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 161   acgccgtcgccaagaaggccggcatcga 188
             ||||||| ||||||||||||||||||||
Sbjct: 14460 acgccgtggccaagaaggccggcatcga 14433
to top
>gb|AY190738.1| Pagrus major 40S ribosomal protein S18 mRNA, partial cds
          Length = 477

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 174 gaaggccggcatcgacctcaacaaga 199
           |||||||| |||||||||||||||||
Sbjct: 103 gaaggccgacatcgacctcaacaaga 128
to top
>gb|BC079336.1| Rattus norvegicus similar to hypothetical protein D4Ertd89e, mRNA
            (cDNA clone MGC:94772 IMAGE:7106021), complete cds
          Length = 2708

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 295  agttttccttttctcccctttttcct 320
            |||||||||||| |||||||||||||
Sbjct: 2305 agttttccttttttcccctttttcct 2330
to top
>ref|NM_001014191.1| Rattus norvegicus similar to hypothetical protein D4Ertd89e
            (RGD1305703), mRNA
          Length = 2708

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 295  agttttccttttctcccctttttcct 320
            |||||||||||| |||||||||||||
Sbjct: 2305 agttttccttttttcccctttttcct 2330
to top
>ref|XM_482939.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 298  tttccttttctcccctttttc 318
            |||||||||||||||||||||
Sbjct: 1340 tttccttttctcccctttttc 1320
to top
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence
          Length = 236455

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 168    cgccaagaaggccggcatcgacctc 192
              |||| ||||||||||||||||||||
Sbjct: 142466 cgccgagaaggccggcatcgacctc 142490
to top
>emb|X68078.1|NTRPCL28 N.tabacum mRNA for chloroplast ribosomal protein CL28
          Length = 671

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 50  gcaatttgtgaacctgcagtacaagaagctgtggtgggaggccggaaagcgctacgt 106
           ||||||||| ||||| || |||||||   | ||||||||||| || |||||||||||
Sbjct: 359 gcaatttgtaaaccttcaatacaagagaatttggtgggaggcaggcaagcgctacgt 415
to top
>gb|AC009108.10| Homo sapiens chromosome 16 clone RP11-463O9, complete sequence
          Length = 168656

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 105   gtcaagctcaggctctccacc 125
             |||||||||||||||||||||
Sbjct: 60065 gtcaagctcaggctctccacc 60045
to top
>gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome 16, complete sequence
          Length = 197096

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   ctcaacaagaaatgagtgatg 210
             |||||||||||||||||||||
Sbjct: 26697 ctcaacaagaaatgagtgatg 26717
to top
>emb|Z84481.1|HS440O21 Human DNA sequence from clone RP3-440O21 on chromosome X, complete
             sequence
          Length = 107677

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 297   ttttccttttctcccctttttccta 321
             ||||||||||||||| |||||||||
Sbjct: 77043 ttttccttttctcccatttttccta 77019
to top
>gb|AC150480.3| Rhinolophus ferrumequinum clone VMRC7-380O7, complete sequence
          Length = 171158

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 297   ttttccttttctccccttttt 317
             |||||||||||||||||||||
Sbjct: 26700 ttttccttttctccccttttt 26680
to top
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 168    cgccaagaaggccggcatcga 188
              |||||||||||||||||||||
Sbjct: 257273 cgccaagaaggccggcatcga 257293
to top
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 96     aagcgctacgtcaagctcagg 116
              |||||||||||||||||||||
Sbjct: 178958 aagcgctacgtcaagctcagg 178938
to top
>gb|AC023080.6| Homo sapiens chromosome 11, clone RP11-397M16, complete sequence
          Length = 175832

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 342    cttataaataaatgtcccccttttg 366
              |||||||||||||| ||||||||||
Sbjct: 135930 cttataaataaatgacccccttttg 135906
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1       aaccgggccaacaaggtgtcc 21
               |||||||||||||||||||||
Sbjct: 3942353 aaccgggccaacaaggtgtcc 3942333
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 154     ggcctcgacgccgtcgccaagaaggccgg 182
               ||||||| ||||| |||||||||||||||
Sbjct: 1871500 ggcctcgccgccgccgccaagaaggccgg 1871528
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 298      tttccttttctcccctttttc 318
                |||||||||||||||||||||
Sbjct: 23473400 tttccttttctcccctttttc 23473380
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 64       tgcagtacaagaagctgtggt 84
                |||||||||||||||||||||
Sbjct: 19426286 tgcagtacaagaagctgtggt 19426266
to top
>gb|AC004086.14| Homo sapiens 12 PAC RP3-329E11 (Roswell Park Cancer Institute Human Bac
             Library) complete sequence
          Length = 94508

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 293   tcagttttccttttctccccttttt 317
             ||||||||| |||||||||||||||
Sbjct: 28439 tcagttttctttttctccccttttt 28463
to top
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 297    ttttccttttctccccttttt 317
              |||||||||||||||||||||
Sbjct: 440314 ttttccttttctccccttttt 440294
to top
>gb|AY957387.1| Pseudomonas stutzeri DnrE (dnrE) gene, complete cds; NarL-like (narL)
             and NarX-like (narX) genes, complete sequence; NarK
             (narK), NarM (narM), NarG (narG), NarH (narH), NarJ
             (narJ), and NarI (narI) genes, complete cds; and unknown
             gene
          Length = 15150

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 168   cgccaagaaggccggcatcga 188
             |||||||||||||||||||||
Sbjct: 11656 cgccaagaaggccggcatcga 11676
to top
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0409B11
          Length = 168354

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     tgcagtacaagaagctgtggt 84
              |||||||||||||||||||||
Sbjct: 115824 tgcagtacaagaagctgtggt 115804
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 173     agaaggccggcatcgacctca 193
               |||||||||||||||||||||
Sbjct: 4649822 agaaggccggcatcgacctca 4649842
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 143     tcgagaagcacggcctcgacg 163
               |||||||||||||||||||||
Sbjct: 1053765 tcgagaagcacggcctcgacg 1053745



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 167     tcgccaagaaggccggcatcgacctcaa 194
               |||||| |||||||||||||||| ||||
Sbjct: 1834224 tcgccaggaaggccggcatcgacatcaa 1834197
to top
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_E05
          Length = 126978

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 298   tttccttttctcccctttttc 318
             |||||||||||||||||||||
Sbjct: 64815 tttccttttctcccctttttc 64795
to top
>emb|Y00142.1|SLXP55 Streptomyces lividans DNA for xp55 protein and p49 protein
          Length = 4540

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 168  cgccaagaaggccggcatcga 188
            |||||||||||||||||||||
Sbjct: 3677 cgccaagaaggccggcatcga 3697
to top
>gb|AC127373.3| Mus musculus BAC clone RP23-42M8 from 6, complete sequence
          Length = 233833

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 300   tccttttctcccctttttcct 320
             |||||||||||||||||||||
Sbjct: 64845 tccttttctcccctttttcct 64825
to top
>emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chromosome 4, complete
              sequence
          Length = 183261

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 297    ttttccttttctccccttttt 317
              |||||||||||||||||||||
Sbjct: 120336 ttttccttttctccccttttt 120356
to top
>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence
          Length = 185966

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 300    tccttttctcccctttttcct 320
              |||||||||||||||||||||
Sbjct: 176479 tccttttctcccctttttcct 176459
to top
>dbj|AP002075.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2230O14, complete
             sequence
          Length = 118977

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 286   tttatcttcagttttcctttt 306
             |||||||||||||||||||||
Sbjct: 83947 tttatcttcagttttcctttt 83967
to top
>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence
          Length = 203838

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  cttcagttttccttttctcc 310
            ||||||||||||||||||||
Sbjct: 9226 cttcagttttccttttctcc 9207
to top
>gb|AC159205.2| Mus musculus BAC clone RP23-233O17 from chromosome 13, complete
            sequence
          Length = 202409

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 297  ttttccttttctcccctttttcct 320
            ||||||||||||| ||||||||||
Sbjct: 9488 ttttccttttctctcctttttcct 9511
to top
>ref|XM_421335.1| PREDICTED: Gallus gallus similar to KIAA1409 (LOC423426), mRNA
          Length = 7074

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   cagcaatttgtgaacctgca 67
            ||||||||||||||||||||
Sbjct: 6454 cagcaatttgtgaacctgca 6435
to top
>gb|AC146698.10| Mus musculus chromosome 13, clone RP24-342B2, complete sequence
          Length = 122164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ataaataaatgtcccccttt 364
             ||||||||||||||||||||
Sbjct: 69326 ataaataaatgtcccccttt 69307
to top
>gb|AC116527.18| Mus musculus chromosome 16, clone RP24-354B8, complete sequence
          Length = 165306

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   ttttccttttctcccctttttcct 320
             |||||||||| |||||||||||||
Sbjct: 40766 ttttccttttttcccctttttcct 40743
to top
>ref|NM_001007254.1| Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
            (ATP6V1C1), transcript variant 2, mRNA
          Length = 5667

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  tggatttatcttcagttttccttt 305
            ||||||||||||||||||| ||||
Sbjct: 3005 tggatttatcttcagtttttcttt 3028
to top
>ref|NM_001695.3| Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
            (ATP6V1C1), transcript variant 1, mRNA
          Length = 5721

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  tggatttatcttcagttttccttt 305
            ||||||||||||||||||| ||||
Sbjct: 3059 tggatttatcttcagtttttcttt 3082
to top
>gb|AC140201.3| Mus musculus BAC clone RP23-267F15 from chromosome 16, complete sequence
          Length = 166079

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ttttccttttctcccctttt 316
              ||||||||||||||||||||
Sbjct: 148399 ttttccttttctcccctttt 148380
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 142     atcgagaagcacggcctcgacgcc 165
               ||||||||||||||| ||||||||
Sbjct: 2648003 atcgagaagcacggcatcgacgcc 2647980
to top
>gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-280D18, complete
             sequence
          Length = 221134

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ttttccttttctcccctttt 316
             ||||||||||||||||||||
Sbjct: 57669 ttttccttttctcccctttt 57688



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ttttccttttctcccctttt 316
             ||||||||||||||||||||
Sbjct: 57653 ttttccttttctcccctttt 57672
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 168     cgccaagaaggccggcatcg 187
               ||||||||||||||||||||
Sbjct: 2294308 cgccaagaaggccggcatcg 2294327
to top
>gb|AC124259.6| Homo sapiens chromosome 11, clone RP11-21N2, complete sequence
          Length = 99973

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   ttttccttttctcccctttttcct 320
             ||||||||||||||| ||||||||
Sbjct: 46963 ttttccttttctcccatttttcct 46986
to top
>gb|AC121803.3| Mus musculus BAC clone RP23-441A23 from chromosome 6, complete sequence
          Length = 211809

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   ttttccttttctcccctttttcct 320
             |||||||||||| |||||||||||
Sbjct: 78194 ttttccttttcttccctttttcct 78171
to top
>gb|AC125088.4| Mus musculus BAC clone RP24-152J3 from chromosome 12, complete sequence
          Length = 149712

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   caagaaatgagtgatgatga 214
             ||||||||||||||||||||
Sbjct: 64261 caagaaatgagtgatgatga 64280
to top
>gb|BC045260.1| Xenopus laevis heterogeneous ribonuclear particle protein, mRNA (cDNA
            clone MGC:52620 IMAGE:4681284), complete cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  taaataaatgtccccctttt 365
            ||||||||||||||||||||
Sbjct: 1552 taaataaatgtccccctttt 1571
to top
>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence
          Length = 228367

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   ttttccttttctcccctttt 316
             ||||||||||||||||||||
Sbjct: 32370 ttttccttttctcccctttt 32351
to top
>gb|AC113541.10| Mus musculus chromosome 5, clone RP23-185N2, complete sequence
          Length = 210222

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ttttccttttctcccctttt 316
              ||||||||||||||||||||
Sbjct: 139416 ttttccttttctcccctttt 139397



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ttttccttttctcccctttt 316
              ||||||||||||||||||||
Sbjct: 139400 ttttccttttctcccctttt 139381
to top
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33
             Contains the 5' end of a novel gene and the 3' end of a
             novel gene, complete sequence
          Length = 176422

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   agcatatcttcttgatttcc 239
             ||||||||||||||||||||
Sbjct: 51577 agcatatcttcttgatttcc 51558
to top
>ref|NG_004051.1| Mus musculus immunoglobulin lambda chain complex (Igl) on chromosome 16
          Length = 234987

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ttttccttttctcccctttt 316
             ||||||||||||||||||||
Sbjct: 57982 ttttccttttctcccctttt 58001
to top
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 167    tcgccaagaaggccggcatcgacctcaa 194
              ||||||||||||||||| ||||| ||||
Sbjct: 129432 tcgccaagaaggccggcctcgacgtcaa 129405
to top
>dbj|AK090702.1| Homo sapiens cDNA FLJ33383 fis, clone BRACE2006514
          Length = 2035

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 282 tggatttatcttcagttttccttt 305
           ||||||||||||||||||| ||||
Sbjct: 155 tggatttatcttcagtttttcttt 178
to top
>gb|AC108683.2| Homo sapiens Xp BAC RP11-539J11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 61375

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   ttttccttttctcccctttt 316
             ||||||||||||||||||||
Sbjct: 39808 ttttccttttctcccctttt 39827
to top
>gb|AC116545.1| Homo sapiens X BAC CTD-2009P21 (CalTech Human BAC Library D) complete
            sequence
          Length = 25300

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  ttttccttttctcccctttt 316
            ||||||||||||||||||||
Sbjct: 3750 ttttccttttctcccctttt 3769
to top
>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ttttccttttctcccctttttcct 320
              ||||||||||||||| ||||||||
Sbjct: 190366 ttttccttttctcccatttttcct 190343
to top
>gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosome 16, complete sequence
          Length = 174321

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ttttccttttctcccctttttcct 320
              |||||||||| |||||||||||||
Sbjct: 156580 ttttccttttttcccctttttcct 156557
to top
>gb|AC090058.21| Homo sapiens 12 BAC RP11-112N23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 181102

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    caagaagctgtggtgggagg 90
             ||||||||||||||||||||
Sbjct: 92667 caagaagctgtggtgggagg 92686
to top
>emb|BX817300.1|CNS0ACFR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL13ZF06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 838

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ttttccttttctcccctttttcct 320
           |||||||||||| |||||||||||
Sbjct: 730 ttttccttttctaccctttttcct 707
to top
>gb|AC007500.7| Homo sapiens chromosome 16 clone RP11-545E2, complete sequence
          Length = 220562

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    ttttccttttctcccctttt 316
              ||||||||||||||||||||
Sbjct: 191700 ttttccttttctcccctttt 191719
to top
>gb|AC155263.2| Mus musculus BAC clone RP23-415I11 from chromosome 13, complete
             sequence
          Length = 202801

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ataaataaatgtcccccttt 364
             ||||||||||||||||||||
Sbjct: 64136 ataaataaatgtcccccttt 64117
to top
>gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21B14 genomic sequence, complete
             sequence
          Length = 85657

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   ctcaacaagaaatgagtgat 209
             ||||||||||||||||||||
Sbjct: 70851 ctcaacaagaaatgagtgat 70870
to top
>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX,
             narK, orf4, narM, narG, narH, narJ, narI, nifM), partial
             and complete cds
          Length = 15819

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   gccaagaaggccggcatcga 188
             ||||||||||||||||||||
Sbjct: 11866 gccaagaaggccggcatcga 11885
to top
>dbj|BS000217.1| Pan troglodytes chromosome 22 clone:PTB-004I03, map 22, complete
            sequences
          Length = 53637

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 297  ttttccttttctcccctttttcct 320
            |||||||||||| |||||||||||
Sbjct: 4136 ttttccttttcttccctttttcct 4159
to top
>emb|BX648079.1|HSM808225 Homo sapiens mRNA; cDNA DKFZp686N08183 (from clone DKFZp686N08183)
          Length = 5620

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 282  tggatttatcttcagttttccttt 305
            ||||||||||||||||||| ||||
Sbjct: 2997 tggatttatcttcagtttttcttt 3020
to top
>dbj|AP002040.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEC18
          Length = 80099

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ctcaacaagaaatgagtgat 209
             ||||||||||||||||||||
Sbjct: 45216 ctcaacaagaaatgagtgat 45197
to top
>gb|AF363578.1| Homo sapiens ATPase H+ transporting lysosomal protein (ATP6C) gene,
             complete cds; BAALC (BAALC) gene, complete cds,
             alternatively spliced; and frizzled-like protein 6 (FZD6)
             gene, complete cds
          Length = 347253

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   tggatttatcttcagttttccttt 305
             ||||||||||||||||||| ||||
Sbjct: 79853 tggatttatcttcagtttttcttt 79876
to top
>gb|AC007918.2|F28J9 Arabidopsis thaliana chromosome 1 BAC F28J9 sequence, complete sequence
          Length = 115963

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   ctcaacaagaaatgagtgat 209
             ||||||||||||||||||||
Sbjct: 13171 ctcaacaagaaatgagtgat 13152
to top
>gb|AY105324.1| Zea mays PCO143177 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 agcacggcctcgacgccgtc 168
           ||||||||||||||||||||
Sbjct: 938 agcacggcctcgacgccgtc 919
to top
>dbj|AP000843.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684N3, complete
              sequence
          Length = 191204

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    ttttccttttctcccctttt 316
              ||||||||||||||||||||
Sbjct: 162350 ttttccttttctcccctttt 162331
to top
>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 297    ttttccttttctcccctttttcct 320
              |||||||||||| |||||||||||
Sbjct: 168024 ttttccttttcttccctttttcct 168047
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     gcacggcctcgacgccgtcg 169
               ||||||||||||||||||||
Sbjct: 2670634 gcacggcctcgacgccgtcg 2670653
to top
>emb|CR974566.12| Pig DNA sequence from clone CH242-112C22 on chromosome 17, complete
            sequence
          Length = 164668

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  tttccttttctccccttttt 317
            ||||||||||||||||||||
Sbjct: 8476 tttccttttctccccttttt 8457
to top
>emb|AL645468.11| Mouse DNA sequence from clone RP23-246F18 on chromosome 4, complete
             sequence
          Length = 209764

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   agtaaccttataaataaatg 355
             ||||||||||||||||||||
Sbjct: 73905 agtaaccttataaataaatg 73924
to top
>dbj|AP003550.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1639H6, complete
             sequence
          Length = 140609

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 282   tggatttatcttcagttttccttt 305
             ||||||||||||||||||| ||||
Sbjct: 63927 tggatttatcttcagtttttcttt 63950
to top
>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292
             region, complete sequence
          Length = 165942

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   ttttccttttctcccctttttcct 320
             |||||||||||| |||||||||||
Sbjct: 70046 ttttccttttcttccctttttcct 70069
to top
>dbj|AP003029.2| Homo sapiens genomic DNA, chromosome 11q, clone:CTC-343F17, complete
             sequence
          Length = 142882

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   ttttccttttctcccctttt 316
             ||||||||||||||||||||
Sbjct: 33081 ttttccttttctcccctttt 33062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,914,657
Number of Sequences: 3902068
Number of extensions: 3914657
Number of successful extensions: 122209
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121668
Number of HSP's gapped (non-prelim): 527
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top