>2A5Z_ARATH (Q9LVE2) Serine/threonine protein phosphatase 2A 59 kDa regulatory|
           subunit B' zeta isoform (PP2A, B' subunit, zeta isoform)
           (AtB' zeta)
          Length = 518

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 30/72 (41%), Positives = 39/72 (54%)
 Frame = +3

Query: 360 MIKQILGRLPKKPAKSGEKDFAGAGSSSLSSPTADARTTTDLTMSSRVGNPSNYVTNPGQ 539
           MIKQI G+LP+KP+KS + D  G G+S   S  A+  T    +MS      SN  TN G+
Sbjct: 1   MIKQIFGKLPRKPSKSLQNDSNGEGAS--GSRVANG-TLAPNSMS------SNRNTNQGK 51

Query: 540 TYGNRNAGVAAG 575
                +A V AG
Sbjct: 52  KPLGGDAVVQAG 63

>2A5G_ARATH (Q8RW96) Serine/threonine protein phosphatase 2A 59 kDa regulatory|
           subunit B' gamma isoform (PP2A, B' subunit, gamma
           isoform) (AtB' gamma)
          Length = 522

 Score = 36.2 bits (82), Expect = 0.075
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
 Frame = +3

Query: 360 MIKQILGRLPKKPAKSGEKD-------------FAGAGSSSLSSPTADARTTTDLTMSSR 500
           MIKQI G+LP+KP+KS   D                +G SS+S P++ +  +     +  
Sbjct: 1   MIKQIFGKLPRKPSKSSHNDSNPNGEGGVNSYYIPNSGISSISKPSSKSSASNSNGANGT 60

Query: 501 VGNPSNYVTN 530
           V  PS+  +N
Sbjct: 61  VIAPSSTSSN 70

>RGYR1_SULTO (Q971T7) Reverse gyrase 1 [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1156

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 20/55 (36%), Positives = 28/55 (50%)
 Frame = +3

Query: 360 MIKQILGRLPKKPAKSGEKDFAGAGSSSLSSPTADARTTTDLTMSSRVGNPSNYV 524
           + K+++G  P    K   K  A + S SLS+PT   +TTT L  S    N + YV
Sbjct: 73  IFKRVIGNEPWNLQKYWIKRLAKSESFSLSAPTGLGKTTTLLVYSLFFSNTTLYV 127

>GUNN_ERWCT (Q59394) Endoglucanase N precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase N) (Cellulase N)
          Length = 444

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
 Frame = -2

Query: 505 PTLLDMVKSVVVLASAVGLD--------SDDEP----APAKSFSPDLAGFLGSLPRICLI 362
           P+L + VK  V  A ++G+         SD++P    A AK+F  ++AG  GS P +   
Sbjct: 105 PSLANKVKEAVAAAQSLGVYIIIDWHILSDNDPNIYKAQAKTFFAEMAGLYGSSPNVIYE 164

Query: 361 ITD*AN 344
           I +  N
Sbjct: 165 IANEPN 170

>GUNV_PECCC (Q47096) Endoglucanase 5 precursor (EC 3.2.1.4) (Endoglucanase V)|
           (Endo-1,4-beta-glucanase V) (Cellulase V)
          Length = 505

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
 Frame = -2

Query: 505 PTLLDMVKSVVVLASAVGLD--------SDDEP----APAKSFSPDLAGFLGSLPRICLI 362
           P+L + VK  V  A ++G+         SD++P    A AK+F  ++AG  GS P +   
Sbjct: 105 PSLANKVKEAVAAAQSLGVYIIIDWHILSDNDPNIYKAQAKTFFAEMAGLYGSSPNVIYE 164

Query: 361 ITD*AN 344
           I +  N
Sbjct: 165 IANEPN 170

>Y5621_ARATH (O81488) PHD finger protein At5g26210|
          Length = 255

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +2

Query: 521 CHESWADLRQQERWCCCG-CQQWFHG 595
           C ES+A     E W CC  C+ WFHG
Sbjct: 205 CGESYA---ADEFWICCDLCEMWFHG 227

>RGP2_HUMAN (P47736) Rap1 GTPase-activating protein 1 (Rap1GAP)|
          Length = 663

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -1

Query: 350 GEQVPDQTALNKSPRIHHSSARSNPEPKSTKKTA 249
           G++ PD   +++ P+  +SS +S+PE  +TK  A
Sbjct: 519 GQKTPDSGHVSQEPKSENSSTQSSPEMPTTKNRA 552

>VILL_HUMAN (O15195) Villin-like protein|
          Length = 856

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 530 IRDIIARIANPTRHGQICGGSC 465
           I+D+  +  +P RHGQ+C G+C
Sbjct: 398 IQDLHRQPVDPKRHGQLCAGNC 419

>2A5I_ARATH (Q93YV6) Serine/threonine protein phosphatase 2A 57 kDa regulatory|
           subunit B' iota isoform (PP2A, B' subunit, iota isoform)
           (AtB' iota)
          Length = 500

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 360 MIKQILGRLPKKPAKSGEKDFAGAGSSSLSSPTADARTT 476
           M KQ L +LP+K +KS   +   + S  +SSP   + T+
Sbjct: 1   MFKQFLSKLPRKSSKSDSGELNRSSSGPVSSPVQRSGTS 39

>PUB3_SCHPO (O14326) E3 ubiquitin--protein ligase pub3 (EC 6.3.2.-)|
          Length = 786

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +3

Query: 372 ILGRLPKKPAKSGEKDFAGAGSSSLSSPTADARTTTDLTMSSRVGNPSNYVTNPGQTYGN 551
           +LG L  K A S  +  AG  SS+ ++ T    TTT    +     P+       Q+  N
Sbjct: 121 VLGNLVLKVAPSKIRAPAGNHSSTTANRTTSTPTTTTARTTRTTPRPTATTNTSNQSTSN 180

Query: 552 --RNAGVAAGASNG 587
             RN G +A  SNG
Sbjct: 181 STRN-GTSAATSNG 193

>H12_VOLCA (Q08865) Histone H1-II|
          Length = 240

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 238 SAAPIKRRTARGQKGKGVKPKARKSLFPPKTCRRIGAGGKERAQ 107
           +AAP K + A  +K K   PK  K+   PK   +  A  K +A+
Sbjct: 192 AAAPKKAKAATPKKAKAATPKKAKAAAKPKAAAKPKAAAKPKAK 235

>P35_MYCPE (Q50367) Lipoprotein p35 precursor|
          Length = 362

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +3

Query: 396 PAKSGEKDFAGAGSSSLSSPTA-DARTTTDLTMSSRVGNPSNYVTNPGQTYGNRNAGVAA 572
           PA   E    GA S    + T  D  TT+ L +     NP NY TN G+   +  A    
Sbjct: 58  PAIKSEVSLTGALSKIYDTKTGTDRETTSQLIVKDIKANPENYFTN-GEALKDVIASATV 116

Query: 573 GASNGF 590
               GF
Sbjct: 117 TVDGGF 122

>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 350  GEQVPDQTALNKSPRIHHSSARSNPEPKSTKKTAPFPI 237
            G   P +  L   P  H +   + P P  T ++APFP+
Sbjct: 3090 GTSYPAEPGLPSQPAFHPTGHYAAPTPMPTTQSAPFPV 3127

>IF4F2_YEAST (P39936) Eukaryotic initiation factor 4F subunit p130 (eIF4F p130)|
           (eIF-4F p130) (mRNA cap-binding protein complex subunit
           p130)
          Length = 914

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -1

Query: 341 VPDQTALNKSPRIHHSSARSNPEPKSTKKTAPFPI 237
           +P Q     SP   H    +NPEP ST KT    I
Sbjct: 118 IPQQMVPVASPPYTHQPLNTNPEPPSTPKTTKIEI 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,520,568
Number of Sequences: 219361
Number of extensions: 1670156
Number of successful extensions: 5326
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5320
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)