ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16m08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E02, full insert sequence Length = 1722 Score = 511 bits (258), Expect = e-142 Identities = 494/570 (86%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 993 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 1051 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1052 gctcgtctccgaggggtacgtgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 1111 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 || ||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1112 cctcaccaccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 1171 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 1172 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 1231 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 1232 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 1291 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| ||||||||||| || || |||||||||||||||||||||||||| || Sbjct: 1292 caagttcggccatggcgagggctcggcgtatctcttcgacccggacatctacacggatgg 1351 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccggaggacgacaagaagccggc 424 ||||||| | ||||||||||| |||||||||||| ||||| ||| |||| ||| ||| Sbjct: 1352 caggatcgcagtgcagggcattgacgccgtgctgttcccgccggatgacaccaagacgg- 1410 Query: 425 cacgccggtctccaccccggagaggaaggcgcccgccgtcaccggctc---caggaagag 481 |||||| | | | |||| |||| ||||||||||||||||||| | || ||||| Sbjct: 1411 --cgccggacacggcgccggtcaggagggcgcccgccgtcaccggcactcgcaagaagaa 1468 Query: 482 caagctccggcgaggcaagctgttggaggcaacgtgcagaatggcttggcgtcttgggtc 541 ||| |||||| |||||||| |||| || ||||||||| |||||| |||| || | |||| Sbjct: 1469 caaactccggagaggcaagttgttagaagcaacgtgccaaatggc-tggcatccttggtc 1527 Query: 542 agcgatcgcgattagcgagctgccagtaga 571 |||||| |||||| || ||||||||||||| Sbjct: 1528 agcgattgcgattcgcaagctgccagtaga 1557
>dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009K09, full insert sequence Length = 1903 Score = 511 bits (258), Expect = e-142 Identities = 494/570 (86%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 994 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 1052 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1053 gctcgtctccgaggggtacgtgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 1112 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 || ||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1113 cctcaccaccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 1172 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 1173 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 1232 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 1233 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 1292 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| ||||||||||| || || |||||||||||||||||||||||||| || Sbjct: 1293 caagttcggccatggcgagggctcggcgtatctcttcgacccggacatctacacggatgg 1352 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccggaggacgacaagaagccggc 424 ||||||| | ||||||||||| |||||||||||| ||||| ||| |||| ||| ||| Sbjct: 1353 caggatcgcagtgcagggcattgacgccgtgctgttcccgccggatgacaccaagacgg- 1411 Query: 425 cacgccggtctccaccccggagaggaaggcgcccgccgtcaccggctc---caggaagag 481 |||||| | | | |||| |||| ||||||||||||||||||| | || ||||| Sbjct: 1412 --cgccggacacggcgccggtcaggagggcgcccgccgtcaccggcactcgcaagaagaa 1469 Query: 482 caagctccggcgaggcaagctgttggaggcaacgtgcagaatggcttggcgtcttgggtc 541 ||| |||||| |||||||| |||| || ||||||||| |||||| |||| || | |||| Sbjct: 1470 caaactccggagaggcaagttgttagaagcaacgtgccaaatggc-tggcatccttggtc 1528 Query: 542 agcgatcgcgattagcgagctgccagtaga 571 |||||| |||||| || ||||||||||||| Sbjct: 1529 agcgattgcgattcgcaagctgccagtaga 1558
>ref|XM_476698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1902 Score = 494 bits (249), Expect = e-136 Identities = 357/393 (90%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 914 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 972 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 973 cctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcg 1032 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1033 gctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacat 1092 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 1093 gatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggt 1152 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 | |||||||||||||||||||||| |||||||| |||||||||||||||||| || || Sbjct: 1153 gaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggt 1212 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1213 caagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgg 1272 Query: 365 caggatctcggtgcagggcatcgacgccgtgct 397 |||||||| ||||||||||||||||||||||| Sbjct: 1273 gaggatctccgtgcagggcatcgacgccgtgct 1305
>ref|XM_506171.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.127 mRNA Length = 1913 Score = 494 bits (249), Expect = e-136 Identities = 357/393 (90%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 926 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 984 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 985 cctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcg 1044 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1045 gctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacat 1104 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 1105 gatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggt 1164 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 | |||||||||||||||||||||| |||||||| |||||||||||||||||| || || Sbjct: 1165 gaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggt 1224 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1225 caagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgg 1284 Query: 365 caggatctcggtgcagggcatcgacgccgtgct 397 |||||||| ||||||||||||||||||||||| Sbjct: 1285 gaggatctccgtgcagggcatcgacgccgtgct 1317
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 494 bits (249), Expect = e-136 Identities = 357/393 (90%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 3291401 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 3291459 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3291460 cctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcg 3291519 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 3291520 gctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacat 3291579 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 3291580 gatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggt 3291639 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 | |||||||||||||||||||||| |||||||| |||||||||||||||||| || || Sbjct: 3291640 gaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggt 3291699 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 3291700 caagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgg 3291759 Query: 365 caggatctcggtgcagggcatcgacgccgtgct 397 |||||||| ||||||||||||||||||||||| Sbjct: 3291760 gaggatctccgtgcagggcatcgacgccgtgct 3291792
>dbj|AK098844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B24, full insert sequence Length = 1902 Score = 494 bits (249), Expect = e-136 Identities = 357/393 (90%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 914 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 972 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 973 cctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcg 1032 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1033 gctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacat 1092 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 1093 gatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggt 1152 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 | |||||||||||||||||||||| |||||||| |||||||||||||||||| || || Sbjct: 1153 gaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggt 1212 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1213 caagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgg 1272 Query: 365 caggatctcggtgcagggcatcgacgccgtgct 397 |||||||| ||||||||||||||||||||||| Sbjct: 1273 gaggatctccgtgcagggcatcgacgccgtgct 1305
>dbj|AK065047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I08, full insert sequence Length = 1915 Score = 494 bits (249), Expect = e-136 Identities = 357/393 (90%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 926 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 984 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 985 cctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcg 1044 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1045 gctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacat 1104 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 1105 gatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggt 1164 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 | |||||||||||||||||||||| |||||||| |||||||||||||||||| || || Sbjct: 1165 gaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggt 1224 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1225 caagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgg 1284 Query: 365 caggatctcggtgcagggcatcgacgccgtgct 397 |||||||| ||||||||||||||||||||||| Sbjct: 1285 gaggatctccgtgcagggcatcgacgccgtgct 1317
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 494 bits (249), Expect = e-136 Identities = 357/393 (90%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 101094 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 101152 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 || || || |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 101153 cctcgtctccgaggggtacgtgctcaccgtgctggcgcccaacgacgaggccatggcgcg 101212 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 101213 gctcaccaccgaccagctcagcgagccggggtcgccggagaacatcctctactaccacat 101272 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 ||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 101273 gatcccggagtaccagacggaggagagcatgtacaacgcggtgcgccgcttcgggaaggt 101332 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 | |||||||||||||||||||||| |||||||| |||||||||||||||||| || || Sbjct: 101333 gaggtacgacacgctgcggctgcccaacaaggtgacggcgagggaggccgacgggtcggt 101392 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 101393 caagttcggccatggcgagggctccgcctacctgttcgacccggacatctacaccgacgg 101452 Query: 365 caggatctcggtgcagggcatcgacgccgtgct 397 |||||||| ||||||||||||||||||||||| Sbjct: 101453 gaggatctccgtgcagggcatcgacgccgtgct 101485
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 484 bits (244), Expect = e-133 Identities = 361/400 (90%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 107718 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 107660 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 107659 gctcgtctccgaggggtacgtgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 107600 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 || ||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 107599 cctcaccaccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 107540 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 107539 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 107480 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 107479 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 107420 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| ||||||||||| || || |||||||||||||||||||||||||| || Sbjct: 107419 caagttcggccatggcgagggctcggcgtatctcttcgacccggacatctacacggatgg 107360 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||| | ||||||||||| |||||||||||| ||||| Sbjct: 107359 caggatcgcagtgcagggcattgacgccgtgctgttcccg 107320 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||| | || |||||||||||||| ||||||| | | Sbjct: 129942 tacaacgag-ctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagccca 129884 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || || ||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 129883 gctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 129824 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 129823 gctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 129764 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 129763 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 129704 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 129703 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 129644 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||| ||||| ||||||||||| || || ||||||||||||||||||| | | ||||| Sbjct: 129643 caagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacgg 129584 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 129583 caggatctcagtgcagggcattgacgccgtgctgttcccg 129544 Score = 52.0 bits (26), Expect = 0.002 Identities = 66/78 (84%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 494 aggcaagctgttggaggcaacgtgcagaatggcttggcgtcttgggtcagcgatcgcgat 553 ||||||| |||| || ||||||||| ||||||| ||| || | |||||||||| ||||| Sbjct: 105662 aggcaagttgttagaagcaacgtgccaaatggct-ggcatccttggtcagcgattgcgat 105604 Query: 554 tagcgagctgccagtaga 571 | || ||||||||||||| Sbjct: 105603 tcgcaagctgccagtaga 105586
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 484 bits (244), Expect = e-133 Identities = 361/400 (90%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 32455590 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 32455532 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 32455531 gctcgtctccgaggggtacgtgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 32455472 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 || ||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 32455471 cctcaccaccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 32455412 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 32455411 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 32455352 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 32455351 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 32455292 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| ||||||||||| || || |||||||||||||||||||||||||| || Sbjct: 32455291 caagttcggccatggcgagggctcggcgtatctcttcgacccggacatctacacggatgg 32455232 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||| | ||||||||||| |||||||||||| ||||| Sbjct: 32455231 caggatcgcagtgcagggcattgacgccgtgctgttcccg 32455192 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||| | || |||||||||||||| ||||||| | | Sbjct: 32477814 tacaacgag-ctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagccca 32477756 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || || ||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 32477755 gctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 32477696 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 32477695 gctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 32477636 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 32477635 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 32477576 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 32477575 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 32477516 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||| ||||| ||||||||||| || || ||||||||||||||||||| | | ||||| Sbjct: 32477515 caagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacgg 32477456 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 32477455 caggatctcagtgcagggcattgacgccgtgctgttcccg 32477416 Score = 52.0 bits (26), Expect = 0.002 Identities = 66/78 (84%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 494 aggcaagctgttggaggcaacgtgcagaatggcttggcgtcttgggtcagcgatcgcgat 553 ||||||| |||| || ||||||||| ||||||| ||| || | |||||||||| ||||| Sbjct: 32453534 aggcaagttgttagaagcaacgtgccaaatggct-ggcatccttggtcagcgattgcgat 32453476 Query: 554 tagcgagctgccagtaga 571 | || ||||||||||||| Sbjct: 32453475 tcgcaagctgccagtaga 32453458 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 568 tagaagaaggaaggatggaggaaga 592 |||||||||| |||||||||||||| Sbjct: 23474938 tagaagaagggaggatggaggaaga 23474914 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ggtggtggcgagggaggccgacggc 299 ||||||||||||||||| ||||||| Sbjct: 20737169 ggtggtggcgagggaggacgacggc 20737193 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cgacgaggccatggcgcggc 126 |||||||||||||||||||| Sbjct: 21506489 cgacgaggccatggcgcggc 21506470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 484 bits (244), Expect = e-133 Identities = 361/400 (90%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||||| || |||||||||||||| ||||||| ||| || Sbjct: 32546100 tacaacgag-ctcgccgacatcctcgtcaacctcacctcgctcgccaccgagatgggccg 32546042 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || |||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 32546041 gctcgtctccgaggggtacgtgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 32545982 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 || ||||| | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 32545981 cctcaccaccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 32545922 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 32545921 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 32545862 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 32545861 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 32545802 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||||||||| ||||||||||| || || |||||||||||||||||||||||||| || Sbjct: 32545801 caagttcggccatggcgagggctcggcgtatctcttcgacccggacatctacacggatgg 32545742 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||| | ||||||||||| |||||||||||| ||||| Sbjct: 32545741 caggatcgcagtgcagggcattgacgccgtgctgttcccg 32545702 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||| | || |||||||||||||| ||||||| | | Sbjct: 32568324 tacaacgag-ctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagccca 32568266 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || || ||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 32568265 gctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 32568206 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 32568205 gctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 32568146 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 32568145 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 32568086 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 32568085 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 32568026 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||| ||||| ||||||||||| || || ||||||||||||||||||| | | ||||| Sbjct: 32568025 caagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacgg 32567966 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 32567965 caggatctcagtgcagggcattgacgccgtgctgttcccg 32567926 Score = 52.0 bits (26), Expect = 0.002 Identities = 66/78 (84%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 494 aggcaagctgttggaggcaacgtgcagaatggcttggcgtcttgggtcagcgatcgcgat 553 ||||||| |||| || ||||||||| ||||||| ||| || | |||||||||| ||||| Sbjct: 32544044 aggcaagttgttagaagcaacgtgccaaatggct-ggcatccttggtcagcgattgcgat 32543986 Query: 554 tagcgagctgccagtaga 571 | || ||||||||||||| Sbjct: 32543985 tcgcaagctgccagtaga 32543968 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 568 tagaagaaggaaggatggaggaaga 592 |||||||||| |||||||||||||| Sbjct: 23467966 tagaagaagggaggatggaggaaga 23467942 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ggtggtggcgagggaggccgacggc 299 ||||||||||||||||| ||||||| Sbjct: 20730198 ggtggtggcgagggaggacgacggc 20730222 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cgacgaggccatggcgcggc 126 |||||||||||||||||||| Sbjct: 21499518 cgacgaggccatggcgcggc 21499499
>gb|AY107894.1| Zea mays PCO107975 mRNA sequence Length = 988 Score = 452 bits (228), Expect = e-124 Identities = 299/323 (92%) Strand = Plus / Plus Query: 75 gaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcggctgaccacg 134 ||||| ||||| || |||||||| || ||||||||||||||||||||||| || |||||| Sbjct: 39 gagggctacgtcctcaccgtgctcgcccccaacgacgaggccatggcgcgcctcaccacg 98 Query: 135 gnccagctgagcgagcccgggtcgccggagaacatcctctactaccacatgatcccggag 194 | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 99 gaccagctcagcgagcccgggtcgcccgagaacatcctctactaccacatgatccccgag 158 Query: 195 taccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggtgcggtacgac 254 |||||||| |||||| ||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 159 taccagaccgaggagtccatgtacaacgccgtgcgccgcttcggcaaggtgcgctacgac 218 Query: 255 acgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgtcaagttcggc 314 || ||||| |||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 219 accctgcgcctgccgcacaaggtcgtcgcgcgggaggccgacggctccgtcaagttcggc 278 Query: 315 cagggcgagggctccgcctacctcttcgacccggacatctacacggacggcaggatctcg 374 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 279 cagggcgagggctccgcctacctcttcgacccggacatctacaccgacggcaggatctcc 338 Query: 375 gtgcagggcatcgacgccgtgct 397 ||||||||||||||||||||||| Sbjct: 339 gtgcagggcatcgacgccgtgct 361 Score = 79.8 bits (40), Expect = 1e-11 Identities = 83/96 (86%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 476 gaagagcaagctccggcgaggcaagctgttggaggcaacgtgcagaatggcttggcgtct 535 ||||| ||||||||||||||||||| |||| ||||| |||||| | ||||| ||| ||| Sbjct: 440 gaagatcaagctccggcgaggcaagttgttagaggcgacgtgccaagtggctgggc-tct 498 Query: 536 tgggtcagcgatcgcgattagcgagctgccagtaga 571 | |||||||| |||||||| || ||||||||||||| Sbjct: 499 tcggtcagcggtcgcgattcgcaagctgccagtaga 534
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%), Gaps = 1/400 (0%) Strand = Plus / Minus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||| | || |||||||||||||| ||||||| | | Sbjct: 11263 tacaacgag-ctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagccca 11205 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || || ||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 11204 gctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 11145 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 11144 gctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 11085 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 11084 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 11025 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 11024 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 10965 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||| ||||| ||||||||||| || || ||||||||||||||||||| | | ||||| Sbjct: 10964 caagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacgg 10905 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 10904 caggatctcagtgcagggcattgacgccgtgctgttcccg 10865
>dbj|AK073842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067C09, full insert sequence Length = 1820 Score = 420 bits (212), Expect = e-114 Identities = 353/400 (88%), Gaps = 1/400 (0%) Strand = Plus / Plus Query: 5 tacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnannggggcg 64 ||||||||| || ||||||||| | || |||||||||||||| ||||||| | | Sbjct: 965 tacaacgag-ctcgccgacatcttcgtcaacctcacctcgctcgccaccgagttagccca 1023 Query: 65 gctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatggcgcg 124 ||| || || || ||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 1024 gctcgtctccgaagggtacgcgctcaccgtgctcgcgcccaacgacgaggccatggcgcg 1083 Query: 125 gctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacat 184 ||| ||| | | |||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1084 gctcaccgccgaccagctcagcgagcccggctcgccggagaacatcctgtactaccacat 1143 Query: 185 gatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggcaaggt 244 |||||||||||||||||| |||||||||||||||||||| || || |||||||||||||| Sbjct: 1144 gatcccggagtaccagaccgaggagagcatgtacaacgcggtgcggcggttcggcaaggt 1203 Query: 245 gcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggctccgt 304 ||| |||||||||||||||||||||||||||||||||||| | |||||||||||||| || Sbjct: 1204 gcgctacgacacgctgcggctgccgcacaaggtggtggcgcgcgaggccgacggctcagt 1263 Query: 305 caagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacggacgg 364 |||||| ||||| ||||||||||| || || ||||||||||||||||||| | | ||||| Sbjct: 1264 caagtttggccatggcgagggctcggcgtatctcttcgacccggacatcttcgccgacgg 1323 Query: 365 caggatctcggtgcagggcatcgacgccgtgctgctcccg 404 ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 1324 caggatctcagtgcagggcattgacgccgtgctgttcccg 1363
>dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT43M15, TM0198a, complete sequence Length = 75051 Score = 133 bits (67), Expect = 7e-28 Identities = 303/382 (79%), Gaps = 1/382 (0%) Strand = Plus / Minus Query: 1 cgggtacaacgagnctggccgacatcctggtgaacctcacctcgctggccaccgnanngg 60 ||||||||||||| |||| ||||| ||||||||||| || |||||||| |||| || Sbjct: 16076 cgggtacaacgaga-tggctgacattctggtgaaccttacgtcgctggctaccgagatgg 16018 Query: 61 ggcggctggtgtcggaggggtacgtgctgaccgtgctggcgcccaacgacgaggccatgg 120 | || ||||||||||||| || || ||||| || | || || ||||| ||||| |||| Sbjct: 16017 gtcgtttggtgtcggagggttatgttctgactgtattagctccgaacgatgaggctatgg 15958 Query: 121 cgcggctgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactacc 180 || |||||| |||| ||||||||||| || || |||||||| | || | ||||||| Sbjct: 15957 cgaagctgacgacggagcagctgagcgaaccgggtgcgccggagcagataatgtactacc 15898 Query: 181 acatgatcccggagtaccagacggaggagagcatgtacaacgccgtccgccggttcggca 240 | |||| |||||||| |||||||| |||||||||||||| || || | ||||||| | Sbjct: 15897 atttgataccggagtatcagacggaagagagcatgtacaatgcggtgagaaggttcggga 15838 Query: 241 aggtgcggtacgacacgctgcggctgccgcacaaggtggtggcgagggaggccgacggct 300 ||||| ||||| || |||||| ||||||||||||||||||| | |||||| || || | Sbjct: 15837 aggtgaactacgataccctgcggttgccgcacaaggtggtggctaaggaggctgatgggt 15778 Query: 301 ccgtcaagttcggccagggcgagggctccgcctacctcttcgacccggacatctacacgg 360 | |||||||||||||| || || || || || || | ||||||||||| |||| || | Sbjct: 15777 cggtcaagttcggccatggagacgggtcggcttatttgttcgacccggatatctttaccg 15718 Query: 361 acggcaggatctcggtgcaggg 382 | ||| |||||||||| ||||| Sbjct: 15717 atggccggatctcggtccaggg 15696
>gb|AY104390.1| Zea mays PCO107974 mRNA sequence Length = 745 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 332 ctacctcttcgacccggacatctacacggacggcaggatctcggtgcagggcatcgacgc 391 ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 290 ctacctcttggacccggacatctacaccgacggcaggatctccgtgcagggcatcgacgc 349 Query: 392 cgtgct 397 |||||| Sbjct: 350 cgtgct 355
>gb|AY112540.1| Zea mays CL33472_1 mRNA sequence Length = 452 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 533 tcttgggtcagcgatcgcgattagcgagctgccagtaga 571 |||| ||||||||||||||||| |||||||||||||||| Sbjct: 421 tcttcggtcagcgatcgcgattcgcgagctgccagtaga 383
>ref|NM_120722.3| Arabidopsis thaliana unknown protein AT5G06390 mRNA, complete cds Length = 2116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 127 tgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacatga 186 ||||||||| |||||||| ||||| || | |||||| | ||| | |||||||| || | Sbjct: 1050 tgaccacggatcagctgagtgagccaggagcaccggagcagatcgtatactaccatataa 1109 Query: 187 tcccggagtaccagacggaggagagcatgtacaa 220 |||| ||||| || ||||||||||| |||||||| Sbjct: 1110 tccctgagtatcaaacggaggagagtatgtacaa 1143
>gb|BT020253.1| Arabidopsis thaliana At5g06390 gene, complete cds Length = 1377 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 127 tgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacatga 186 ||||||||| |||||||| ||||| || | |||||| | ||| | |||||||| || | Sbjct: 962 tgaccacggatcagctgagtgagccaggagcaccggagcagatcgtatactaccatataa 1021 Query: 187 tcccggagtaccagacggaggagagcatgtacaa 220 |||| ||||| || ||||||||||| |||||||| Sbjct: 1022 tccctgagtatcaaacggaggagagtatgtacaa 1055
>gb|BT015342.1| Arabidopsis thaliana At5g06390 gene, complete cds Length = 1698 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 127 tgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacatga 186 ||||||||| |||||||| ||||| || | |||||| | ||| | |||||||| || | Sbjct: 1004 tgaccacggatcagctgagtgagccaggagcaccggagcagatcgtatactaccatataa 1063 Query: 187 tcccggagtaccagacggaggagagcatgtacaa 220 |||| ||||| || ||||||||||| |||||||| Sbjct: 1064 tccctgagtatcaaacggaggagagtatgtacaa 1097
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15 Length = 83865 Score = 54.0 bits (27), Expect = 5e-04 Identities = 77/94 (81%) Strand = Plus / Plus Query: 127 tgaccacggnccagctgagcgagcccgggtcgccggagaacatcctctactaccacatga 186 ||||||||| |||||||| ||||| || | |||||| | ||| | |||||||| || | Sbjct: 62368 tgaccacggatcagctgagtgagccaggagcaccggagcagatcgtatactaccatataa 62427 Query: 187 tcccggagtaccagacggaggagagcatgtacaa 220 |||| ||||| || ||||||||||| |||||||| Sbjct: 62428 tccctgagtatcaaacggaggagagtatgtacaa 62461
>ref|NM_179922.1| Arabidopsis thaliana unknown protein AT2G35860 mRNA, complete cds Length = 1744 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 1075 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1121
>gb|AY541627.1| Leiognathus elongatus from Japan cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 632 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 562 tgccagtagaagaaggaaggatggaggaaga 592 ||||||||||||||| |||||||| |||||| Sbjct: 282 tgccagtagaagaagaaaggatgggggaaga 252
>gb|AY093189.1| Arabidopsis thaliana unknown protein (At2g35860) mRNA, complete cds Length = 1694 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 1025 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1071
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 96191 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 96145
>gb|BT006590.1| Arabidopsis thaliana At2g35860 mRNA, complete cds Length = 1338 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 979 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1025
>emb|BX820376.1|CNS0A8QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 1036 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1082
>emb|BX819499.1|CNS0A8UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1506 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 1010 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1056
>emb|BX820863.1|CNS0A8OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1550 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 1040 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1086
>emb|BX820101.1|CNS0A8IG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgtacaacgc 223 |||||||| || |||||||| || || |||||||| ||||||||||| Sbjct: 978 taccacatcataccggagtatcaaacagaggagagtatgtacaacgc 1024
>emb|BX831388.1|CNS0A1M2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1797 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 174 tactaccacatgatcccggagtaccagacggaggagagcatgtacaa 220 |||||||| || ||||| ||||| || ||||||||||| |||||||| Sbjct: 1095 tactaccatataatccctgagtatcaaacggaggagagtatgtacaa 1141
>gb|AY666511.1| Piranga olivacea voucher 1B-1258 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 659 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 agtagaagaaggaaggatggaggaag 591 |||||||||||||||||||| ||||| Sbjct: 253 agtagaagaaggaaggatgggggaag 228
>gb|AC110898.7| Mus musculus chromosome 18, clone RP24-114C6, complete sequence Length = 161778 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 571 aagaaggaaggatggaggaaga 592 |||||||||||||||||||||| Sbjct: 127044 aagaaggaaggatggaggaaga 127023
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 94 tgctggcgcccaacgacgaggccatg 119 |||||||||||| ||||||||||||| Sbjct: 1857177 tgctggcgcccagcgacgaggccatg 1857202
>gb|AY275859.1| Cypseloides rutilus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 384 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 agtagaagaaggaaggatggaggaag 591 ||||| |||||||||||||||||||| Sbjct: 341 agtaggagaaggaaggatggaggaag 316
>gb|AF391350.1| Stiphodon elegans cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 563 gccagtagaagaaggaaggatggaggaaga 592 ||||| ||||||||||| |||||||||||| Sbjct: 338 gccagaagaagaaggaatgatggaggaaga 309
>gb|AF460846.1| Cynocephalus variegatus mitochondrion, complete genome Length = 16781 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 agtagaagaaggaaggatggaggaag 591 |||||||| ||||||||||||||||| Sbjct: 5692 agtagaagtaggaaggatggaggaag 5667
>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete sequence Length = 196568 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 571 aagaaggaaggatggaggaaga 592 |||||||||||||||||||||| Sbjct: 42342 aagaaggaaggatggaggaaga 42363
>ref|NM_112002.2| Arabidopsis thaliana unknown protein AT3G11700 mRNA, complete cds Length = 1970 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 1174 taccacattattccagagtatcagacggaggaaagcatgta 1214
>gb|AF165496.1| Ortalis canicollis cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1088 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 gccagtagaagaaggaaggatggaggaag 591 |||||||| |||||||||||||| ||||| Sbjct: 176 gccagtaggagaaggaaggatgggggaag 148
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ggtggtggcgagggaggccgacggc 299 ||||||||||||||||| ||||||| Sbjct: 150926 ggtggtggcgagggaggacgacggc 150950
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 568 tagaagaaggaaggatggaggaaga 592 |||||||||| |||||||||||||| Sbjct: 107319 tagaagaagggaggatggaggaaga 107343
>gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence Length = 45173 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 36710 taccacattattccagagtatcagacggaggaaagcatgta 36750
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence, complete sequence Length = 100835 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 542 taccacattattccagagtatcagacggaggaaagcatgta 582
>gb|AY133794.1| Arabidopsis thaliana clone U10635 unknown protein (At3g11700) mRNA, complete cds Length = 1420 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 1021 taccacattattccagagtatcagacggaggaaagcatgta 1061
>gb|AY056197.1| Arabidopsis thaliana unknown protein (At3g11700) mRNA, complete cds Length = 1982 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 1167 taccacattattccagagtatcagacggaggaaagcatgta 1207
>gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 202972 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaagat 593 |||||||||||||| |||||||||| Sbjct: 7648 agaagaaggaaggaaggaggaagat 7672
>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence Length = 112187 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 aggaaggatggaggaagattt 595 ||||||||||||||||||||| Sbjct: 79039 aggaaggatggaggaagattt 79059
>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown, complete sequence Length = 172935 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 575 aggaaggatggaggaagattt 595 ||||||||||||||||||||| Sbjct: 1726 aggaaggatggaggaagattt 1746
>gb|AY058879.1| Arabidopsis thaliana AT3g11700/T19F11_10 mRNA, complete cds Length = 1651 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 1174 taccacattattccagagtatcagacggaggaaagcatgta 1214
>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete sequence Length = 169869 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 aggaaggatggaggaagattt 595 ||||||||||||||||||||| Sbjct: 21725 aggaaggatggaggaagattt 21705
>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete sequence Length = 142047 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 ggtggtggcgagggaggccgacggc 299 ||||||||||||||||| ||||||| Sbjct: 27279 ggtggtggcgagggaggacgacggc 27303
>ref|XM_393271.2| PREDICTED: Apis mellifera similar to CG10573-PA (LOC409778), mRNA Length = 2859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 ccaacgacgaggccatggcgc 123 ||||||||||||||||||||| Sbjct: 746 ccaacgacgaggccatggcgc 766
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaagat 593 ||||||||| ||||||||||||||| Sbjct: 10810808 agaagaagggaggatggaggaagat 10810832 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 12458508 gaaggaaggatggaggaaga 12458489 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaaga 592 |||||||||||||| ||||||||| Sbjct: 5152929 agaagaaggaaggaaggaggaaga 5152952 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaaga 592 |||||||||||||| ||||||||| Sbjct: 5144168 agaagaaggaaggaaggaggaaga 5144191
>emb|BX822679.1|CNS0A653 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 1151 taccacattattccagagtatcagacggaggaaagcatgta 1191
>emb|BX824454.1|CNS0A5OI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1530 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgta 217 |||||||| || || ||||| ||||||||||| |||||||| Sbjct: 1115 taccacattattccagagtatcagacggaggaaagcatgta 1155
>gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence Length = 88203 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 278 ggtggcgagggaggccgacgg 298 ||||||||||||||||||||| Sbjct: 41718 ggtggcgagggaggccgacgg 41738
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaagat 593 ||||||||| ||||||||||||||| Sbjct: 34531 agaagaagggaggatggaggaagat 34555
>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19, complete sequence Length = 168515 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 atggaggaagatttgatctca 602 ||||||||||||||||||||| Sbjct: 91590 atggaggaagatttgatctca 91570
>gb|AF036942.1|AF036942 Gallus gallus photoreceptor guanylate cyclase 1 (GC1) mRNA, partial cds Length = 3672 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 gacgccgtgctgctcccggag 407 ||||||||||||||||||||| Sbjct: 124 gacgccgtgctgctcccggag 144
>dbj|AB034825.1| Diplophos taenia mitochondrial DNA, complete genome Length = 16418 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 gccagtagaagaaggaaggatggaggaag 591 ||||| |||||||||||||| |||||||| Sbjct: 5806 gccaggagaagaaggaaggagggaggaag 5778
>gb|AY666413.1| Bombycilla garrulus voucher 1B-2754 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 656 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 244 agaaggaaggatggaggaag 225
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 ggaaggatggaggaagattt 595 |||||||||||||||||||| Sbjct: 128689 ggaaggatggaggaagattt 128670
>ref|XM_464300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 177 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ggtggtggcgagggaggccgacgg 298 ||||||||||||||||| |||||| Sbjct: 66 ggtggtggcgagggaggacgacgg 89
>ref|XM_450393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaaga 592 |||||||||||||| ||||||||| Sbjct: 382 agaagaaggaaggaaggaggaaga 405
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 cgacgaggccatggcgcggc 126 |||||||||||||||||||| Sbjct: 11383 cgacgaggccatggcgcggc 11364
>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence Length = 120487 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 32167 agaaggaaggatggaggaag 32148
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 aagaaggaaggatggaggaa 590 |||||||||||||||||||| Sbjct: 106014 aagaaggaaggatggaggaa 106033
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 180704 gaaggaaggatggaggaaga 180685
>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence Length = 191100 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 5330 gaaggaaggatggaggaaga 5311
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 35063 gaaggaaggatggaggaaga 35082
>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence Length = 165330 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 578 aaggatggaggaagatttga 597 |||||||||||||||||||| Sbjct: 73982 aaggatggaggaagatttga 73963
>gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, complete sequence Length = 103532 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 tacaacgccgtccgccggttcggc 239 |||||||||||| ||||||||||| Sbjct: 60016 tacaacgccgtcggccggttcggc 60039
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cggagaacatcctctactac 179 |||||||||||||||||||| Sbjct: 1643514 cggagaacatcctctactac 1643533
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 145774 agaaggaaggatggaggaag 145755
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 ggaaggatggaggaagattt 595 |||||||||||||||||||| Sbjct: 224193 ggaaggatggaggaagattt 224212
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 gacatctacacggacggcag 367 |||||||||||||||||||| Sbjct: 2245854 gacatctacacggacggcag 2245873
>emb|AL157787.11| Human DNA sequence from clone RP11-328K1 on chromosome 10, complete sequence Length = 102198 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 83765 agaaggaaggatggaggaag 83746
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ggtgcggtacgacacgctgcggct 265 |||||| ||||||||||||||||| Sbjct: 4037906 ggtgcgttacgacacgctgcggct 4037883
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gctgcggctgccgcacaaggtggt 280 |||||||||| ||||||||||||| Sbjct: 255641 gctgcggctggcgcacaaggtggt 255618
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gctgcggctgccgcacaaggtggt 280 |||||||||| ||||||||||||| Sbjct: 46679 gctgcggctggcgcacaaggtggt 46656
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gctgcggctgccgcacaaggtggt 280 |||||||||| ||||||||||||| Sbjct: 109134 gctgcggctggcgcacaaggtggt 109111
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 cggtgcagggcatcgacgcc 392 |||||||||||||||||||| Sbjct: 42195 cggtgcagggcatcgacgcc 42176
>gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, complete sequence Length = 159476 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 aagaaggaaggatggaggaa 590 |||||||||||||||||||| Sbjct: 157985 aagaaggaaggatggaggaa 158004
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cgtcaagttcggccagggcg 321 |||||||||||||||||||| Sbjct: 4829521 cgtcaagttcggccagggcg 4829502
>gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, complete sequence Length = 159531 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 aagaaggaaggatggaggaa 590 |||||||||||||||||||| Sbjct: 157982 aagaaggaaggatggaggaa 158001
>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence Length = 169876 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 aagaaggaaggatggaggaa 590 |||||||||||||||||||| Sbjct: 58745 aagaaggaaggatggaggaa 58726
>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 27703 gaaggaaggatggaggaaga 27684
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 cggctggtgtcggaggggta 82 |||||||||||||||||||| Sbjct: 1374644 cggctggtgtcggaggggta 1374625
>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence Length = 213468 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 31505 gaaggaaggatggaggaaga 31524
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold Length = 380805 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 573 gaaggaaggatggaggaagatttg 596 |||||||||| ||||||||||||| Sbjct: 332382 gaaggaaggaaggaggaagatttg 332405
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ggtggtggcgagggaggccgacgg 298 ||||||||||||||||| |||||| Sbjct: 3940318 ggtggtggcgagggaggacgacgg 3940295
>gb|AC141557.5| Homo sapiens 12 BAC CTD-2318O12 (Cal Tech Human BAC Library D) complete sequence Length = 18318 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 3841 agaaggaaggatggaggaag 3860
>emb|BX823236.1|CNS0A65G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1857 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 177 taccacatgatcccggagtaccagacggaggagagcatgt 216 |||||||| || || ||||| ||||||||||| ||||||| Sbjct: 1120 taccacattattccagagtatcagacggaggaaagcatgt 1159
>gb|AF391378.1| Amblygobius phalaena isolate 2 cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 569 agaagaaggaaggatggaggaaga 592 ||||||||||||||||| |||||| Sbjct: 332 agaagaaggaaggatgggggaaga 309
>gb|AF391372.1| Xenisthmus sp. CET-2001 cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 562 tgccagtagaagaaggaaggatgg 585 |||||| ||||||||||||||||| Sbjct: 339 tgccagaagaagaaggaaggatgg 316
>gb|AF391367.1| Mogurnda adspersa cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 562 tgccagtagaagaaggaaggatgg 585 |||||| ||||||||||||||||| Sbjct: 339 tgccagaagaagaaggaaggatgg 316
>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162572 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 64829 agaaggaaggatggaggaag 64810
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 ggtgcagggcatcgacgccg 393 |||||||||||||||||||| Sbjct: 5422018 ggtgcagggcatcgacgccg 5422037
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaaga 592 |||||||||||||| ||||||||| Sbjct: 155046 agaagaaggaaggaaggaggaaga 155069 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaaga 592 |||||||||||||| ||||||||| Sbjct: 146285 agaagaaggaaggaaggaggaaga 146308
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 124092 gaaggaaggatggaggaaga 124073
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ggtggtggcgagggaggccgacgg 298 ||||||||||||||||| |||||| Sbjct: 138789 ggtggtggcgagggaggacgacgg 138766
>emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chromosome 2, complete sequence Length = 180530 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 171949 agaaggaaggatggaggaag 171968
>emb|X54482.1|SFVGENOME Simian foamy virus type 1 complete genome Length = 12972 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 taccacatgatcccggagta 196 |||||||||||||||||||| Sbjct: 8860 taccacatgatcccggagta 8841
>emb|AJ337696.1|HSA337696 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OO19R Length = 742 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gcgagggaggccgacggctc 301 |||||||||||||||||||| Sbjct: 246 gcgagggaggccgacggctc 227
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 577 gaaggatggaggaagatttg 596 |||||||||||||||||||| Sbjct: 101609 gaaggatggaggaagatttg 101590
>dbj|AK063538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C03, full insert sequence Length = 1705 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 agaagaaggaaggatggaggaaga 592 |||||||||||||| ||||||||| Sbjct: 382 agaagaaggaaggaaggaggaaga 405
>emb|AJ544610.1|TRU544610 Takifugu rubripes dmd gene for putative dystrophin, exons 21-34 Length = 20816 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 5479 gaaggaaggatggaggaaga 5498
>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence Length = 205793 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 aagaaggaaggatggaggaa 590 |||||||||||||||||||| Sbjct: 121990 aagaaggaaggatggaggaa 122009
>dbj|AB241052.1| Distoechurus pennatus mitochondrial DNA, complete genome Length = 16775 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 agaaggaaggatggaggaag 591 |||||||||||||||||||| Sbjct: 5703 agaaggaaggatggaggaag 5684
>emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on chromosome X, complete sequence Length = 228645 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 gaaggaaggatggaggaaga 592 |||||||||||||||||||| Sbjct: 138740 gaaggaaggatggaggaaga 138759
>gb|M33561.1|SMFPOLENV Simian foamy virus type 1 polymerase (pol) gene, 3' end; and envelope (env) gene, complete cds Length = 3534 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 taccacatgatcccggagta 196 |||||||||||||||||||| Sbjct: 2365 taccacatgatcccggagta 2346
>dbj|AB021880.1| Balanus amphitrite bcs-5 mRNA, complete cds Length = 3030 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 cgtgctgctcccggaggacgacaa 415 ||||||||||| |||||||||||| Sbjct: 615 cgtgctgctccgggaggacgacaa 638 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,562,412 Number of Sequences: 3902068 Number of extensions: 3562412 Number of successful extensions: 92175 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91002 Number of HSP's gapped (non-prelim): 1161 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
