>HEM1_SYNPX (Q7U769) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 432

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 366 LDYYDLPAEGDLLIRLISQILSAHAGSGRRLCIPAHHLYHHPDTVYAWFR-SAGLSNL 536
           L+ Y L    DL +  +S+ LS H+G       P    YHH D V    R +AGL +L
Sbjct: 53  LEIYTLVRHPDLGVSAVSEFLSGHSGLATGELTPHLFNYHHEDAVDHLMRVAAGLDSL 110

>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +3

Query: 252 MPDAVLGDIISLLPTREGARTQTLASRW------RHLWRSAPLNL 368
           +PD+VL +I S LP R+  R   +  RW      R LWR   L L
Sbjct: 7   LPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTL 51

>FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat|
           protein 12) (F-box protein FBL12)
          Length = 326

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +3

Query: 252 MPDAVLGDIISLLPTREGARTQTLASRW------RHLWRSAPLNL 368
           +PD VL +I S LP R+  R   +  RW      R LWR   L L
Sbjct: 7   LPDLVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTL 51

>XYLT1_MOUSE (Q811B1) Xylosyltransferase 1 (EC 2.4.2.26) (Xylosyltransferase I)|
           (Peptide O-xylosyltransferase 1)
          Length = 953

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 25/60 (41%), Positives = 27/60 (45%)
 Frame = +1

Query: 7   GASEPGSFAAPRSHRPLXMDAATPLPKKRRSDVPGSNQPXGNLEP*ADGGGHGGARIRDP 186
           GA+E    AAPR  R    D A  LP  R    PG     G     A GGG GGAR + P
Sbjct: 53  GAAEQQQPAAPRRER---RDLAAHLPAARGG--PGGRAGGGG----ARGGGPGGARAQQP 103

>EUTQ_ECOLI (P76555) Ethanolamine utilization protein eutQ|
          Length = 233

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 228 DGVD-HISGMPDAVLGDIISLLPTREGARTQTLASRWRHLWRSAPLNLDYYDLPAEGDLL 404
           DG + H  G+ D V GD        +G+       +W + +    LN D  D+  EG+L 
Sbjct: 136 DGAEPHCVGLTDLVTGD--------DGSSMAAGFMQWENAFFPWTLNYDEIDMVLEGELH 187

Query: 405 IRLISQILSAHAG 443
           +R   Q + A AG
Sbjct: 188 VRHEGQTMIAKAG 200

>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced|
           PDZ-motif protein) (Protein cypher) (Protein oracle)
          Length = 723

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 2   AAAPVSQAPSLRRAATGH*XWMRRLLFPRRGGRTCPEATNRXEISSHEPTAAAMEAPES 178
           AA+P++ +P+L  AA  H            G    P    R + S++ P AAA  AP +
Sbjct: 323 AASPIAASPTLATAAATH-----AAAASAAGPAASPVENPRPQASAYSPAAAASPAPSA 376


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,736,924
Number of Sequences: 219361
Number of extensions: 1171169
Number of successful extensions: 4111
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4106
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)