ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd16l24 |
|---|---|
| Clone Library Name | barley_pub |
>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 308 Score = 271 bits (693), Expect(2) = 6e-85 Identities = 132/144 (91%), Positives = 136/144 (94%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVD+YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR Sbjct: 44 GRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 103 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALN RAVAVV+DPIQSVKGKVVIDAFR IN Sbjct: 104 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSIN 163 Query: 468 PQTMMLGQEPRQTTSNVGHLNKPS 539 PQT+MLGQEPRQTTSN+GHLNKPS Sbjct: 164 PQTIMLGQEPRQTTSNLGHLNKPS 187 Score = 62.8 bits (151), Expect(2) = 6e-85 Identities = 32/42 (76%), Positives = 33/42 (78%) Frame = +2 Query: 2 GAXRXWGSRGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 GA G DSP LD+SEQVYISSLALLKMLKHGRAGVPM Sbjct: 9 GAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPM 50
>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (MAD1) Length = 310 Score = 255 bits (652), Expect(2) = 6e-79 Identities = 125/144 (86%), Positives = 130/144 (90%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVDDYTVRV+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGR Sbjct: 45 GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGR 104 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN Sbjct: 105 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLIN 164 Query: 468 PQTMMLGQEPRQTTSNVGHLNKPS 539 M+LG EPRQTTSN+GHLNKPS Sbjct: 165 ANMMVLGHEPRQTTSNLGHLNKPS 188 Score = 58.5 bits (140), Expect(2) = 6e-79 Identities = 27/32 (84%), Positives = 31/32 (96%) Frame = +2 Query: 32 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 TD+P +D++EQVYISSLALLKMLKHGRAGVPM Sbjct: 20 TDAPAVDTAEQVYISSLALLKMLKHGRAGVPM 51
>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome-associated PAD1 homolog 1) Length = 310 Score = 255 bits (652), Expect(2) = 6e-79 Identities = 125/144 (86%), Positives = 130/144 (90%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVDDYTVRV+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGR Sbjct: 45 GRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGR 104 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN Sbjct: 105 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLIN 164 Query: 468 PQTMMLGQEPRQTTSNVGHLNKPS 539 M+LG EPRQTTSN+GHLNKPS Sbjct: 165 ANMMVLGHEPRQTTSNLGHLNKPS 188 Score = 58.5 bits (140), Expect(2) = 6e-79 Identities = 27/32 (84%), Positives = 31/32 (96%) Frame = +2 Query: 32 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 TD+P +D++EQVYISSLALLKMLKHGRAGVPM Sbjct: 20 TDAPAVDTAEQVYISSLALLKMLKHGRAGVPM 51
>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome regulatory complex subunit p37B) (Yippee-interacting protein 5) Length = 308 Score = 254 bits (649), Expect(2) = 8e-79 Identities = 123/144 (85%), Positives = 131/144 (90%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVDDYTV+V+DVFAMPQ+GTGVSVEAVD VFQ MLDMLKQTGR Sbjct: 43 GRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGR 102 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN Sbjct: 103 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLIN 162 Query: 468 PQTMMLGQEPRQTTSNVGHLNKPS 539 P ++LGQEPRQTTSN+GHL KPS Sbjct: 163 PNMLVLGQEPRQTTSNLGHLQKPS 186 Score = 59.3 bits (142), Expect(2) = 8e-79 Identities = 27/32 (84%), Positives = 32/32 (100%) Frame = +2 Query: 32 TDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 TD+P++D++EQVYISSLALLKMLKHGRAGVPM Sbjct: 18 TDAPVVDTAEQVYISSLALLKMLKHGRAGVPM 49
>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)| Length = 308 Score = 259 bits (663), Expect(2) = 2e-78 Identities = 125/144 (86%), Positives = 132/144 (91%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVDD+TVRVVDVFAMPQSGTGVSVEAVD VFQ NM+DMLKQTGR Sbjct: 44 GRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGR 103 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 PEMVVGWYHSHPGFGCWLS VDINTQQSFE L PRAVAVV+DPIQSVKGKVVIDAFRLIN Sbjct: 104 PEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLIN 163 Query: 468 PQTMMLGQEPRQTTSNVGHLNKPS 539 P T+M+GQEPRQTTSN+GH+NKPS Sbjct: 164 PSTLMMGQEPRQTTSNLGHINKPS 187 Score = 52.4 bits (124), Expect(2) = 2e-78 Identities = 28/42 (66%), Positives = 31/42 (73%) Frame = +2 Query: 2 GAXRXWGSRGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 GA G G D PL+D+SE VYISSLALLKML+HGR G PM Sbjct: 10 GARMGTGMMG-DQPLVDNSECVYISSLALLKMLRHGRHGTPM 50
>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 312 Score = 254 bits (648), Expect(2) = 2e-77 Identities = 124/144 (86%), Positives = 129/144 (89%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVDDYTV V+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGR Sbjct: 47 GRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGR 106 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFR IN Sbjct: 107 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTIN 166 Query: 468 PQTMMLGQEPRQTTSNVGHLNKPS 539 PQ+M L QEPRQTTSN+GHL KPS Sbjct: 167 PQSMALNQEPRQTTSNLGHLQKPS 190 Score = 55.1 bits (131), Expect(2) = 2e-77 Identities = 28/42 (66%), Positives = 32/42 (76%) Frame = +2 Query: 2 GAXRXWGSRGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 G +G+ DS +D+SE VYISSLALLKMLKHGRAGVPM Sbjct: 12 GNLGTFGANPQDSNQVDTSETVYISSLALLKMLKHGRAGVPM 53
>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11| Length = 311 Score = 234 bits (597), Expect(2) = 4e-71 Identities = 113/139 (81%), Positives = 125/139 (89%) Frame = +3 Query: 123 PWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 302 P VMGLMLG+FVD+YTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVV Sbjct: 51 PMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVV 110 Query: 303 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMM 482 GWYHSHPGFGCWLS VD++TQ+SFE LN RAVAVV+DPIQSVKGKVVIDAFRLI+P T++ Sbjct: 111 GWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVV 170 Query: 483 LGQEPRQTTSNVGHLNKPS 539 QEPRQTTSNVG LNKP+ Sbjct: 171 RNQEPRQTTSNVGLLNKPN 189 Score = 53.5 bits (127), Expect(2) = 4e-71 Identities = 26/36 (72%), Positives = 29/36 (80%) Frame = +2 Query: 20 GSRGTDSPLLDSSEQVYISSLALLKMLKHGRAGVPM 127 G+ T+ PL D+ E VYISSLALLKMLKH RAGVPM Sbjct: 17 GAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPM 52
>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)| Length = 306 Score = 227 bits (578), Expect(2) = 3e-67 Identities = 112/142 (78%), Positives = 120/142 (84%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVDDYTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR Sbjct: 41 GRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGR 100 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVV+DPIQSVKGKVVIDAFRLI+ Sbjct: 101 DQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLID 160 Query: 468 PQTMMLGQEPRQTTSNVGHLNK 533 ++ EPRQTTSN G LNK Sbjct: 161 TGALINNLEPRQTTSNTGLLNK 182 Score = 47.8 bits (112), Expect(2) = 3e-67 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = +2 Query: 50 DSSEQVYISSLALLKMLKHGRAGVPM 127 D+ E VYISS+ALLKMLKHGRAGVPM Sbjct: 22 DTKETVYISSIALLKMLKHGRAGVPM 47
>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11| Length = 306 Score = 226 bits (576), Expect(2) = 6e-67 Identities = 111/142 (78%), Positives = 121/142 (85%) Frame = +3 Query: 108 GGPACPWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR 287 G P VMGLMLGEFVD+YTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR Sbjct: 41 GRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGR 100 Query: 288 PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVV+DPIQSVKGKVVIDAFRLI+ Sbjct: 101 DQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLID 160 Query: 468 PQTMMLGQEPRQTTSNVGHLNK 533 ++ QEPRQTTSN G +NK Sbjct: 161 TGALINNQEPRQTTSNSGLMNK 182 Score = 47.8 bits (112), Expect(2) = 6e-67 Identities = 22/26 (84%), Positives = 24/26 (92%) Frame = +2 Query: 50 DSSEQVYISSLALLKMLKHGRAGVPM 127 D+ E VYISS+ALLKMLKHGRAGVPM Sbjct: 22 DTKETVYISSIALLKMLKHGRAGVPM 47
>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III| Length = 319 Score = 215 bits (547), Expect(2) = 2e-61 Identities = 103/144 (71%), Positives = 119/144 (82%), Gaps = 5/144 (3%) Frame = +3 Query: 123 PWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 302 P VMGLMLG+FVDDYT+ V DVFAMPQSGT V+VE+VD V+QT +D+LK GR E VV Sbjct: 48 PLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQTKHMDLLKLVGRTENVV 107 Query: 303 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMM 482 GWYHSHPGFGCWLS VD+NTQQSFEAL+PRAVAVV+DPIQSVKGKV++DAFR +NP + Sbjct: 108 GWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQ 167 Query: 483 L-----GQEPRQTTSNVGHLNKPS 539 + EPRQTTSN+GHL KPS Sbjct: 168 IRPLAPTAEPRQTTSNLGHLTKPS 191 Score = 40.4 bits (93), Expect(2) = 2e-61 Identities = 18/26 (69%), Positives = 23/26 (88%) Frame = +2 Query: 50 DSSEQVYISSLALLKMLKHGRAGVPM 127 D+SE V ISSLALLKML+H R+G+P+ Sbjct: 24 DTSETVNISSLALLKMLRHARSGIPL 49
>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (Dch5) (JAB1 homolog) Length = 327 Score = 108 bits (269), Expect(2) = 1e-25 Identities = 54/112 (48%), Positives = 77/112 (68%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMGLMLG+ V+D T+ V+D FA+P GT V+ +A + + T ++ K+ GR E VG Sbjct: 74 VMGLMLGK-VEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKEVGRMEHAVG 132 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VA+V+DP+++V GKV + AFR Sbjct: 133 WYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRTVSAGKVCLGAFR 184 Score = 27.3 bits (59), Expect(2) = 1e-25 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 + + IS+LALLKM+ H R+G + G G+V Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGKV 82
>CSN5_USTMA (Q4P804) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 406 Score = 106 bits (265), Expect(2) = 1e-24 Identities = 55/115 (47%), Positives = 77/115 (66%), Gaps = 4/115 (3%) Frame = +3 Query: 126 WXVMGLMLGEF-VDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQ--TNMLDMLKQTGRPEM 296 + +MGLM G+ V++ T+ V+D FA+P GT V A + ++ LD K+ GR E Sbjct: 81 YEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLEN 140 Query: 297 VVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSV-KGKVVIDAFR 458 VVGWYHSHPG+GCWLSG+D+NTQ++ + VA+VIDP +++ GKV I AFR Sbjct: 141 VVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFR 195 Score = 25.8 bits (55), Expect(2) = 1e-24 Identities = 10/20 (50%), Positives = 17/20 (85%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAG 118 ++V IS++AL+KM+ H R+G Sbjct: 59 QKVRISAVALIKMVMHARSG 78
>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) (Kip1 C-terminus-interacting protein 2) Length = 333 Score = 102 bits (255), Expect(2) = 1e-23 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMGLMLG+ VD T+ ++D FA+P GT V+ +A + + ++ KQ GR E +G Sbjct: 76 VMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 134 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VAVVIDP +++ GKV + AFR Sbjct: 135 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR 186 Score = 26.2 bits (56), Expect(2) = 1e-23 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +2 Query: 71 ISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 IS+LALLKM+ H R+G + G G+V Sbjct: 56 ISALALLKMVMHARSGGNLEVMGLMLGKV 84
>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) Length = 333 Score = 102 bits (255), Expect(2) = 1e-23 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMGLMLG+ VD T+ ++D FA+P GT V+ +A + + ++ KQ GR E +G Sbjct: 76 VMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 134 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VAVVIDP +++ GKV + AFR Sbjct: 135 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR 186 Score = 26.2 bits (56), Expect(2) = 1e-23 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = +2 Query: 71 ISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 IS+LALLKM+ H R+G + G G+V Sbjct: 56 ISALALLKMVMHARSGGNLEVMGLMLGKV 84
>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 102 bits (255), Expect(2) = 2e-23 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMGLMLG+ VD T+ ++D FA+P GT V+ +A + + ++ KQ GR E +G Sbjct: 77 VMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 135 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VAVVIDP +++ GKV + AFR Sbjct: 136 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR 187 Score = 25.8 bits (55), Expect(2) = 2e-23 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 71 ISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 +S+LALLKM+ H R+G + G G+V Sbjct: 57 VSALALLKMVMHARSGGNLEVMGLMLGKV 85
>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 332 Score = 102 bits (255), Expect(2) = 2e-23 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMGLMLG+ VD T+ ++D FA+P GT V+ +A + + ++ KQ GR E +G Sbjct: 75 VMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 133 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VAVVIDP +++ GKV + AFR Sbjct: 134 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR 185 Score = 25.8 bits (55), Expect(2) = 2e-23 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 71 ISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 +S+LALLKM+ H R+G + G G+V Sbjct: 55 VSALALLKMVMHARSGGNLEVMGLMLGKV 83
>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 102 bits (255), Expect(2) = 2e-23 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMGLMLG+ VD T+ ++D FA+P GT V+ +A + + ++ KQ GR E +G Sbjct: 75 VMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAKQVGRLENAIG 133 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VAVVIDP +++ GKV + AFR Sbjct: 134 WYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLGAFR 185 Score = 25.4 bits (54), Expect(2) = 2e-23 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 71 ISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 +S+LALLKM+ H R+G + G G+V Sbjct: 55 LSALALLKMVMHARSGGNLEVMGLMLGKV 83
>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 469 Score = 100 bits (248), Expect(2) = 6e-23 Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 VMG+M G+ + + ++ V+DV+ +P GT V+ +A + + L+ LKQ GR E +VG Sbjct: 85 VMGMMTGKIIKN-SIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENLKQVGRDENIVG 143 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSV-KGKVVIDAFR 458 WYHSHPG+GCWLSG+D+ TQ + +A+VIDP+++ +GKV I AFR Sbjct: 144 WYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKTEDQGKVEIGAFR 195 Score = 26.6 bits (57), Expect(2) = 6e-23 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 ++ YISSLAL KM H ++G + G G++ Sbjct: 61 KKTYISSLALCKMSVHAKSGGAIEVMGMMTGKI 93
>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)| (Signalosome subunit 5a) (Jun activation domain-binding homolog 2) Length = 358 Score = 98.2 bits (243), Expect(2) = 2e-22 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQ--TNMLDMLKQTGRPEMVVG 305 +MGLM G+ D T+ V+D FA+P GT V A D ++ K GR E VVG Sbjct: 81 IMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQDDAYEYMVEYSQTNKLAGRLENVVG 139 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ+ + +AVVIDP ++V GKV I AFR Sbjct: 140 WYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRTVSAGKVEIGAFR 191 Score = 26.9 bits (58), Expect(2) = 2e-22 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAG 118 ++V IS+LALLKM+ H R+G Sbjct: 57 KRVKISALALLKMVVHARSG 76
>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)| (Signalosome subunit 5b) (Jun activation domain-binding homolog 1) Length = 357 Score = 96.3 bits (238), Expect(2) = 2e-22 Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQ--TNMLDMLKQTGRPEMVVG 305 +MGLM G+ D T+ V+D FA+P GT V A ++ K GR E VVG Sbjct: 81 IMGLMQGKTEGD-TIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVG 139 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + +AVVIDP ++V GKV I AFR Sbjct: 140 WYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFR 191 Score = 28.5 bits (62), Expect(2) = 2e-22 Identities = 12/20 (60%), Positives = 18/20 (90%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAG 118 ++V+IS+LALLKM+ H R+G Sbjct: 57 KRVHISALALLKMVVHARSG 76
>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (JAB1 homolog) Length = 368 Score = 97.8 bits (242), Expect(2) = 6e-22 Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 +MGL+ G +D + ++DVFA+P GT V+ +A + + T +M GR E VVG Sbjct: 78 IMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQAQAYEYMTVYSEMCDTEGRKEKVVG 136 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + VA+VIDP++++ GKV I AFR Sbjct: 137 WYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRTMSAGKVDIGAFR 188 Score = 25.4 bits (54), Expect(2) = 6e-22 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 +Q+ IS++ALLKM H + G + G GR+ Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGRI 86
>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 336 Score = 96.7 bits (239), Expect(2) = 2e-21 Identities = 50/114 (43%), Positives = 70/114 (61%), Gaps = 3/114 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEMVVG 305 VMG+M G +++ T+ + D + +P GT V A D + L + ++ R E V+G Sbjct: 66 VMGMMQG-YIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIG 124 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSV-KGKVVIDAFRLI 464 WYHSHPG+GCWLSG+D+ TQ + N VAVVIDP ++V + KV I AFR I Sbjct: 125 WYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTI 178 Score = 25.0 bits (53), Expect(2) = 2e-21 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 65 VYISSLALLKMLKHGRAG 118 V ISS+A++KM+ H R+G Sbjct: 44 VRISSVAMIKMVMHARSG 61
>CSN5_CRYNE (Q5KAB0) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 371 Score = 96.3 bits (238), Expect(2) = 3e-21 Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 3/114 (2%) Frame = +3 Query: 126 WXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEMV 299 + +MG+M G+ V D T ++DV A+P GT V A + + N + G+ E++ Sbjct: 71 YEIMGIMYGK-VRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELL 129 Query: 300 VGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 GWYHSHPG+GCWLSG+D+NTQ + + N +AVVIDP ++V GKV I AFR Sbjct: 130 RGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFR 183 Score = 24.6 bits (52), Expect(2) = 3e-21 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 65 VYISSLALLKMLKHGRAG 118 V IS++AL+KM+ H R+G Sbjct: 51 VKISAVALIKMVTHARSG 68
>CSN5_EMENI (Q5BBF1) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 335 Score = 94.7 bits (234), Expect(2) = 4e-21 Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEMVVG 305 VMGLM G + + T V D F +P GT V A D + + L ++ GR E VG Sbjct: 73 VMGLMQGYILPN-TFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRMENAVG 131 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + P VAVVIDP +++ GKV I AFR Sbjct: 132 WYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVIDPERTISAGKVDIGAFR 182 Score = 25.8 bits (55), Expect(2) = 4e-21 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAG 118 + V IS++ALLKM+ H R+G Sbjct: 49 KSVRISAVALLKMVMHARSG 68
>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 340 Score = 95.9 bits (237), Expect(2) = 9e-21 Identities = 53/112 (47%), Positives = 67/112 (59%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEMVVG 305 VMGLM G D T V D F +P GT V A D + LD+ + GR E VVG Sbjct: 74 VMGLMQGYTQGD-TFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVG 132 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSV-KGKVVIDAFR 458 WYHSHPG+GCWLSG+D++T+ + +AVVIDP +++ GKV I AFR Sbjct: 133 WYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTINSGKVDIGAFR 184 Score = 23.5 bits (49), Expect(2) = 9e-21 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAG 118 + V IS+ AL+KM H R+G Sbjct: 50 KHVRISATALIKMTMHARSG 69
>CSN5_ASPFU (Q4WZP2) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 334 Score = 92.0 bits (227), Expect(2) = 9e-20 Identities = 52/112 (46%), Positives = 66/112 (58%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEMVVG 305 VMGLM G + + T V D F +P GT V A + + + L + GR E VG Sbjct: 73 VMGLMQGYILPE-TFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAGRMENAVG 131 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D+ T Q + L VAVVIDP +++ GKV I AFR Sbjct: 132 WYHSHPGYGCWLSGIDVTT-QDMQQLGGPFVAVVIDPERTISAGKVDIGAFR 182 Score = 23.9 bits (50), Expect(2) = 9e-20 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +2 Query: 59 EQVYISSLALLKMLKHGRAG 118 + + IS++AL+KM H R+G Sbjct: 49 KSIRISAVALIKMTMHARSG 68
>CSN5_YARLI (Q6C703) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 354 Score = 94.4 bits (233), Expect = 2e-19 Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDH--VFQTNMLDMLKQTGRPEMVVG 305 VMG+M G+ + + T V+D + +P GT V A F L LK GR E +VG Sbjct: 78 VMGMMTGKILPN-TFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIVG 136 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFR 458 WYHSHPG+GCWLSG+D++TQ + +AVV+DP +++ GKV I AFR Sbjct: 137 WYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFR 188
>CSN5_CANAL (Q59PG6) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 213 Score = 85.9 bits (211), Expect(2) = 1e-18 Identities = 42/119 (35%), Positives = 75/119 (63%), Gaps = 7/119 (5%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGR------PE 293 +MG+++G+ + +++ V+D + +P GT V A + + T M++ L + + E Sbjct: 97 IMGMLVGK-ISGHSIIVMDTYRLPVEGTETRVNAQNEAY-TYMVEYLTERQQLSNGKNEE 154 Query: 294 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVK-GKVVIDAFRLIN 467 +VGWYH HP +GCWL G+D++TQ + L +A+V+DP++++K GKV I AFR ++ Sbjct: 155 NIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQGKVEIGAFRNVS 213 Score = 26.2 bits (56), Expect(2) = 1e-18 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = +2 Query: 68 YISSLALLKMLKHGRAG 118 YISSLAL+KM H + G Sbjct: 76 YISSLALMKMCTHAQTG 92
>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 299 Score = 84.7 bits (208), Expect = 1e-16 Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 3/115 (2%) Frame = +3 Query: 123 PWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV--FQTNMLDMLKQTGRPEM 296 P VMG + G+ V+ ++ ++D FA+P GT V A + + + K R E Sbjct: 54 PLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHEN 112 Query: 297 VVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVV-IDAFR 458 V+GWYHSHP +GCWLSGVD+ TQ+ + VAVV+DP +S++ V I AFR Sbjct: 113 VIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFR 167 Score = 28.9 bits (63), Expect = 9.6 Identities = 15/31 (48%), Positives = 21/31 (67%) Frame = +2 Query: 65 VYISSLALLKMLKHGRAGVPMXGDGPDAGRV 157 V IS++ALLKML+H G+P+ G G+V Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGKV 65
>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 420 Score = 82.4 bits (202), Expect = 7e-16 Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPE--MVVG 305 V+G++LG +V D + VVD + +P GT V A ++ + + +T PE +VG Sbjct: 95 VLGMLLG-YVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYL--ETAVPEGLAIVG 151 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS-VKGKVVIDAFRLINPQTMM 482 WYHSHPG+GCWLSG+D TQ + +A+V+DP +S G + I AFR + Sbjct: 152 WYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPETADT 211 Query: 483 LGQEPRQTTSNVGH 524 S GH Sbjct: 212 RSVSSHSNASRYGH 225
>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 373 Score = 78.6 bits (192), Expect = 1e-14 Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 1/112 (0%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 VMG+++G +D V V D +++P GT V A ++ + + + + +VGWY Sbjct: 88 VMGMLVGYTSNDMIV-VKDCYSLPVQGTETRVNAHMESYEYMVQYLDAFVTKEDKIVGWY 146 Query: 312 HSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVV-IDAFRLI 464 HSHPG+GCWLS +DI TQ + +A+V+DP +S+ G + I AFR + Sbjct: 147 HSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSLSGNTLDIGAFRTL 198
>CSN5_YEAST (Q12468) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 455 Score = 75.5 bits (184), Expect = 9e-14 Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 13/128 (10%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEA-----------VDHVFQTNML-DMLK 275 +MG+++G + D V V+D F +P GT V A +D ++ N D Sbjct: 108 IMGILMGFTLKDNIV-VMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRD 166 Query: 276 QTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVV-IDA 452 G VVGW+HSHPG+ CWLS +DI TQ + VA+V+DP++S++ K++ + A Sbjct: 167 YKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGA 226 Query: 453 FRLINPQT 476 FR I ++ Sbjct: 227 FRTIESKS 234
>CSN5_CANGA (Q6FT36) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 465 Score = 68.9 bits (167), Expect = 8e-12 Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 8/142 (5%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSV----EAVDHVFQTNMLDMLKQTGRPEM- 296 VMG++LG + + T + D F +P GT V E+ +++ Q + + R E Sbjct: 96 VMGMLLGNVIGN-TFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMVERSYTRNEEN 154 Query: 297 --VVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKG-KVVIDAFRLIN 467 ++GWYHSHPG+ CWLS +D+ TQ + +A+V+DP +S KV I +FR Sbjct: 155 LNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQ 214 Query: 468 PQTMMLGQEPRQTTSNVGHLNK 533 Q TT LNK Sbjct: 215 DQNDDTNFYELNTTVFDSELNK 236
>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8| Length = 352 Score = 54.7 bits (130), Expect = 2e-07 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 V+G++LG+ D VRV + FA+P + SV +DH + +M DM K+ E ++G Sbjct: 43 VVGVLLGQN-DGKNVRVSNSFAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIG 101 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAF 455 WYHS P L D++ + F+ P + V++D +Q + V DA+ Sbjct: 102 WYHSGPK----LRASDLDINELFKRYTPNPLLVIVD-VQPKETGVPTDAY 146
>BRCC3_MOUSE (P46737) BRCA1/BRCA2-containing complex subunit 3| Length = 291 Score = 52.8 bits (125), Expect = 6e-07 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 33/147 (22%) Frame = +3 Query: 132 VMGLMLGEFVDDY---------------------TVRVVDVFAM--------PQSGTGVS 224 VMGL +GE DD T+R+V + ++ + +S Sbjct: 34 VMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMDTIRIVHIHSVIILRRSDKRKDRVEIS 93 Query: 225 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 404 E + T + + TGRP VVGWYHSHP W S VD+ TQ ++ ++ V + Sbjct: 94 PEQLSAA-STEAERLAELTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGL 152 Query: 405 V----IDPIQSVKGKVVIDAFRLINPQ 473 + I+ + G+V+ F+ I Q Sbjct: 153 IFSCFIEDKNTKTGRVLYTCFQSIQAQ 179
>BRCC3_HUMAN (P46736) BRCA1/BRCA2-containing complex subunit 3| Length = 316 Score = 52.4 bits (124), Expect = 8e-07 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Frame = +3 Query: 279 TGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVV----IDPIQSVKGKVVI 446 TGRP VVGWYHSHP W S VD+ TQ ++ ++ V ++ I+ + G+V+ Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLY 170 Query: 447 DAFRLINPQ 473 F+ I Q Sbjct: 171 TCFQSIQAQ 179
>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h) Length = 352 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/121 (26%), Positives = 65/121 (53%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 V G++LG V+D + + + F PQ T + + +Q M+ L+ + VGWY Sbjct: 63 VQGVLLGLVVED-RLEITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWY 120 Query: 312 HSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQ 491 S +G +++ +++Q S++ +V ++ DPI++ +G + + A+RL P+ M + + Sbjct: 121 QS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLMEVCK 178 Query: 492 E 494 E Sbjct: 179 E 179
>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h) Length = 352 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/121 (26%), Positives = 65/121 (53%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 V G++LG V+D + + + F PQ T + + +Q M+ L+ + VGWY Sbjct: 63 VQGVLLGLVVED-RLEITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWY 120 Query: 312 HSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQ 491 S +G +++ +++Q S++ +V ++ DPI++ +G + + A+RL P+ M + + Sbjct: 121 QS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLMEVCK 178 Query: 492 E 494 E Sbjct: 179 E 179
>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) Length = 352 Score = 48.1 bits (113), Expect = 2e-05 Identities = 32/121 (26%), Positives = 65/121 (53%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 V G++LG V+D + + + F PQ T + + +Q M+ L+ + VGWY Sbjct: 63 VQGVLLGLVVED-RLEITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWY 120 Query: 312 HSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQ 491 S +G +++ +++Q S++ +V ++ DPI++ +G + + A+RL P+ M + + Sbjct: 121 QS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLMEVCK 178 Query: 492 E 494 E Sbjct: 179 E 179
>RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8| Length = 324 Score = 47.0 bits (110), Expect = 3e-05 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 V+G++LG+ D V V + +A+P + SV +DH F +M +M K+ E +VG Sbjct: 42 VVGILLGQNNGD-VVNVANSYAIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVG 100 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 413 WYH+ P L D+ + P V V+ID Sbjct: 101 WYHTGP----QLRPSDLEINNLLKKYIPNPVLVIID 132
>PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Proteasome subunit p39B) (Protein Mov34) Length = 337 Score = 46.2 bits (108), Expect = 6e-05 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 2/96 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 V+G++LG + + V + FA+P + SV +DH + NM M K+ E VVG Sbjct: 36 VVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVG 95 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 413 WYH+ P L DI + P +V V+ID Sbjct: 96 WYHTGPK----LHQNDIAINELVRRYCPNSVLVIID 127
>PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein) Length = 321 Score = 45.1 bits (105), Expect = 1e-04 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 5/99 (5%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDV---FAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEM 296 V+G++LG + +V+DV FA+P + SV +DH + NM M K+ E Sbjct: 35 VVGVLLGS----WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARER 90 Query: 297 VVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 413 +VGWYH+ P L DI + + P +V V+ID Sbjct: 91 IVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVIID 125
>PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog) Length = 324 Score = 45.1 bits (105), Expect = 1e-04 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 5/99 (5%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDV---FAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEM 296 V+G++LG + +V+DV FA+P + SV +DH + NM M K+ E Sbjct: 35 VVGVLLGS----WQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARER 90 Query: 297 VVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 413 +VGWYH+ P L DI + + P +V V+ID Sbjct: 91 IVGWYHTGPK----LHKNDIAINELMKRYCPNSVLVIID 125
>STALP_MOUSE (Q76N33) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) (AMSH family protein) (AMSH-FP) Length = 436 Score = 44.7 bits (104), Expect = 2e-04 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Frame = +3 Query: 138 GLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYH 314 G++ G+ +++T+ V V VE V+ +F Q + +GW H Sbjct: 295 GILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNV-------QDQHGLLTLGWIH 347 Query: 315 SHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 +HP +LS VD++T S++ + P A+A+V P G FRL N Sbjct: 348 THPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
>MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 832 Score = 44.7 bits (104), Expect = 2e-04 Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Frame = +3 Query: 132 VMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 308 V+GL+ G + + D V V TG+ E +D V QT + L G V+GW Sbjct: 600 VIGLLGGRYSEADKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAARGYS--VIGW 656 Query: 309 YHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 425 YHSHP F S DI+TQ +++ R A+ I I S Sbjct: 657 YHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIGMIVS 695
>RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8| Length = 337 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +3 Query: 135 MGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 308 +G++LG+ + T+RV + FA+P + V +DH + NM +M K+ E ++GW Sbjct: 33 VGVILGD-ANSSTIRVTNSFALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGW 91 Query: 309 YHSHP 323 YHS P Sbjct: 92 YHSGP 96
>STALP_HUMAN (Q96FJ0) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 43.9 bits (102), Expect = 3e-04 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 1/111 (0%) Frame = +3 Query: 138 GLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYH 314 G++ G+ +++T+ V V +E V+ +F Q + +GW H Sbjct: 295 GILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNV-------QDQHDLLTLGWIH 347 Query: 315 SHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 +HP +LS VD++T S++ + P A+A+V P G FRL N Sbjct: 348 THPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
>RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8| Length = 326 Score = 43.1 bits (100), Expect = 5e-04 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = +3 Query: 135 MGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 308 +G++LG+ T++V + FA+P + V +DH + NM DM K+ E ++GW Sbjct: 34 VGVLLGDNSGS-TIKVTNSFALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGW 92 Query: 309 YHSHP 323 YHS P Sbjct: 93 YHSGP 97
>MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 828 Score = 42.7 bits (99), Expect = 6e-04 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = +3 Query: 132 VMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 308 V+GL+ G + + D V V TG+ E +D V QT + L G V+GW Sbjct: 598 VIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLAVRGFS--VIGW 654 Query: 309 YHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 425 YHSHP F S DI+TQ +++ R A I I S Sbjct: 655 YHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVS 693
>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 357 Score = 42.4 bits (98), Expect = 8e-04 Identities = 30/86 (34%), Positives = 47/86 (54%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 V+G +LG VD ++V V + F++P + + V AVD F NM ++ K+ E+++GWY Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173 Query: 312 HSHPGFGCWLSGVDINTQQSFEALNP 389 + G V I+ S EA NP Sbjct: 174 AT--GHDITEHSVLIHEYYSREAPNP 197
>STALP_PONPY (Q5R558) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 42.0 bits (97), Expect = 0.001 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 1/111 (0%) Frame = +3 Query: 138 GLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYH 314 G++ G+ +++T+ V V VE V+ +F Q + +GW H Sbjct: 295 GILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELFNV-------QDQHDLLTLGWIH 347 Query: 315 SHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 467 +HP +LS VD++T S++ + A+A+V P G FRL N Sbjct: 348 THPTQTAFLSSVDLHTHCSYQLMLSEAIAIVCSPKHKDTG-----IFRLTN 393
>MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 819 Score = 42.0 bits (97), Expect = 0.001 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = +3 Query: 132 VMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 308 V+GL+ G + + D + V TG+ E +D V QT + L G V+GW Sbjct: 589 VIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCE-MDPVSQTQASETLALRGYS--VIGW 645 Query: 309 YHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 425 YHSHP F S DI+TQ +++ R A I I S Sbjct: 646 YHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMIVS 684
>STABP_XENLA (Q63ZM7) STAM-binding protein-like (EC 3.1.2.15)| Length = 416 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 1/94 (1%) Frame = +3 Query: 138 GLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYH 314 G++ G+ + +++TV V V + E+ + +F L Q + + +GW H Sbjct: 275 GILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELF-------LIQDQQGLITLGWIH 327 Query: 315 SHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 416 +HP +LS VD++T S++ + P ++A+V P Sbjct: 328 THPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 361
>RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8| Length = 329 Score = 41.2 bits (95), Expect = 0.002 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +3 Query: 135 MGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGW 308 +G++LG+ + T+RV + FA+P + V +DH + +M +M K+ E ++GW Sbjct: 34 VGVILGDSQTN-TIRVTNSFALPFEEDEKNSDVWFLDHNYIESMNEMCKKINAKEKLIGW 92 Query: 309 YHSHP 323 YHS P Sbjct: 93 YHSGP 97
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 41.2 bits (95), Expect = 0.002 Identities = 29/86 (33%), Positives = 47/86 (54%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 V+G +LG VD ++V V + F++P + + V AVD F NM ++ K+ E+++GWY Sbjct: 120 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 177 Query: 312 HSHPGFGCWLSGVDINTQQSFEALNP 389 + G V I+ S E+ NP Sbjct: 178 AT--GHDITEHSVLIHEYYSRESPNP 201
>STABP_RAT (Q8R424) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +3 Query: 294 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 416 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 329 LTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 369
>STABP_MOUSE (Q9CQ26) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +3 Query: 294 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 416 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 329 LTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 369
>STABP_HUMAN (O95630) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/41 (39%), Positives = 27/41 (65%) Frame = +3 Query: 294 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 416 + +GW H+HP +LS VD++T S++ + P +VA+V P Sbjct: 329 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>STABP_BRARE (Q6TH47) STAM-binding protein-like (EC 3.1.2.15)| Length = 418 Score = 40.8 bits (94), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +3 Query: 294 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 416 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 323 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 363
>PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulatory subunit 7| (26S proteasome regulatory subunit rpn8) (MOV34 protein) Length = 308 Score = 40.4 bits (93), Expect = 0.003 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 2/96 (2%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 305 V+G++LG V V + +A+P + S+ +DH + +M M K+ E VVG Sbjct: 42 VVGVLLGSSSRG-VVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVG 100 Query: 306 WYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 413 WY + P L D++ F P V V+ID Sbjct: 101 WYSTGPK----LRENDLDVHALFNGYVPNPVLVIID 132
>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) Length = 337 Score = 38.5 bits (88), Expect = 0.012 Identities = 29/113 (25%), Positives = 49/113 (43%) Frame = +3 Query: 123 PWXVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 302 P V G +LG V + V + F P +EA +Q M+ L++ V Sbjct: 44 PTLVTGQLLGLDVGS-VLEVTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTV 102 Query: 303 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRL 461 GWY S G + + I T +++ R V ++ DP ++ G + + A +L Sbjct: 103 GWYQS-TVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALKL 154
>IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f) Length = 293 Score = 38.5 bits (88), Expect = 0.012 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +3 Query: 132 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 311 V+G +LG + D TV + + +A+P + + V AVD + NML + E +VGWY Sbjct: 52 VIGTLLGSILPDGTVDIRNSYAVPHNESSDQV-AVDIDYHHNMLASHLKVNSKETIVGWY 110 Query: 312 HSHPG 326 + G Sbjct: 111 STGAG 115
>GCH1_RALSO (Q8XZK8) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 209 Score = 32.7 bits (73), Expect = 0.67 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 272 EHVEHVGLEDVVDGLDADPGPALRHGEDIHHPDRVVVDELAQHQA--HHL 129 + V + ++DG D DP AL HG + D V++ +A H HHL Sbjct: 55 QRVRELWQRRLLDGYDIDPAEALGHGFEDPRRDMVIIRSIAVHGVCPHHL 104
>NIFJ_ENTAG (P19543) Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)| Length = 1173 Score = 30.8 bits (68), Expect = 2.5 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -2 Query: 335 ATKSRMRVVPAYHHFRSSGLLEHVEHVGLEDVVDGLDADPGPALRHGEDIHHPDRVVVDE 156 A K R+ + + FR+S ++ +E + ED+ LD D R ++ HPD VV Sbjct: 160 AIKGRIPFINFFDGFRTSHEIQKIEVLDYEDLAHLLDRD--AVARFRQNALHPDHPVVRG 217 Query: 155 LAQH 144 AQ+ Sbjct: 218 TAQN 221
>ARGD_METJA (Q58131) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 398 Score = 30.8 bits (68), Expect = 2.5 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +3 Query: 216 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 395 G + ++ + F L L T +P+ G+Y PGF ++ DI + EA+ + Sbjct: 128 GGEIISMYNAFHGRTLTTLAATPKPKYQDGFYPLPPGFK-YVPFNDIEALK--EAITDKT 184 Query: 396 VAVVIDPIQSVKGKVVID 449 A++I+P+Q G V D Sbjct: 185 AAIMIEPVQGEGGIHVAD 202
>DNAA_NEIMB (Q9JXS7) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +3 Query: 240 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 419 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 420 QSVKGK 437 Q +KGK Sbjct: 288 QFIKGK 293
>DNAA_NEIMA (Q9JW45) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +3 Query: 240 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 419 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 420 QSVKGK 437 Q +KGK Sbjct: 288 QFIKGK 293
>DNAA_NEIG1 (Q5FAJ2) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 3.3 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +3 Query: 240 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 419 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 420 QSVKGK 437 Q +KGK Sbjct: 288 QFIKGK 293
>SEB1_CAEEL (Q09460) Calcitonin receptor-like protein seb-1| Length = 546 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +2 Query: 407 DRSHPECQGESGH*CI-PSH*PSDHDAWPGATADNIECWAP 526 + S+P C+ H + P P+D W AT D + CW P Sbjct: 46 EESYPLCKKMLDHNNLFPERDPNDTRIWCNATYDTVLCWPP 86
>HPS6_RAT (Q7M733) Hermansky-Pudlak syndrome 6 protein homolog (Ruby-eye| protein homolog) (Ruby-eye-like protein) (Ru) Length = 809 Score = 29.3 bits (64), Expect = 7.4 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 9/111 (8%) Frame = -3 Query: 532 LFRCPTFDVVCRGSWPSIMV*GLMRRNASMTTFP-----LTLWMGS----ITTATALGFN 380 L CP+F ++ ++ + TT+P L +W S I A +LG + Sbjct: 185 LHHCPSFGLIASRKELFLV--------PTSTTWPGVAHVLLIWSPSKGKVIVAAPSLGLS 236 Query: 379 ASKLC*VLMSTPESQQPNPGCEWYQPTTISGLPVCLSMSSMLVWKTWSTAS 227 SK S P G W T + GLP LS L TW+ +S Sbjct: 237 HSK----------SLNPKQGDTWDFRTLLRGLPGFLSPREPLAVHTWAPSS 277
>CCDC9_MOUSE (Q8VC31) Coiled-coil domain-containing protein 9| Length = 543 Score = 28.9 bits (63), Expect = 9.6 Identities = 18/39 (46%), Positives = 18/39 (46%) Frame = +1 Query: 106 REGRRAHGR*WA*CWASSSTTTRSGWWMSSPCRRAGPGS 222 REG R HGR W S RSG RRAG GS Sbjct: 211 REGSRRHGRNWG---GSDFERVRSGLEQERQGRRAGLGS 246 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,893,976 Number of Sequences: 219361 Number of extensions: 1468446 Number of successful extensions: 4462 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 4293 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4455 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4258037034 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
