ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16l12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full ... 262 4e-67
2gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reduct... 174 7e-41
3gb|AY109096.1| Zea mays PCO119715 mRNA sequence 174 7e-41
4ref|XM_470089.1| Oryza sativa (japonica cultivar-group), mRNA 109 3e-21
5dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 3e-21
6ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr... 62 7e-07
7ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydr... 62 7e-07
8ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr... 62 7e-07
9gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydro... 62 7e-07
10gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydro... 62 7e-07
11gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrof... 62 7e-07
12ref|NM_129979.2| Arabidopsis thaliana MTHFR2; methylenetetrahydr... 54 2e-04
13emb|AJ245414.1|ATH245414 Arabidopsis thaliana mRNA for methylene... 54 2e-04
14gb|AY050434.1| Arabidopsis thaliana At2g44160/F6E13.29 mRNA, com... 54 2e-04
15gb|AF370515.1|AF370515 Arabidopsis thaliana putative methylenete... 54 2e-04
16gb|AF181967.1|AF181967 Arabidopsis thaliana methylenetetrahydrof... 54 2e-04
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 52 7e-04
18gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genom... 52 7e-04
19gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genom... 52 7e-04
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 52 7e-04
21gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map... 48 0.010
22emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B... 46 0.041
23emb|AL160192.3|CNS01RGU Human chromosome 14 DNA sequence BAC R-2... 44 0.16
24gb|AC142271.3| Mus musculus chromosome 5 clone RP24-69A21, compl... 40 2.5
25gb|AC172742.2| Medicago truncatula chromosome 7 BAC clone mth2-1... 40 2.5
26emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 40 2.5 
>gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full insert mRNA
           sequence
          Length = 1653

 Score =  262 bits (132), Expect = 4e-67
 Identities = 174/188 (92%), Gaps = 1/188 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  cttgngctctanatctggtgcagcatattagagccaagtntggtgattactttggcataa 74
           |||| |||||| |||||||| |||| |||| |||||||| ||||||||||||||||||||
Sbjct: 8   cttgtgctctagatctggtggagcacattaaagccaagtatggtgattactttggcataa 67

                                                                       
Query: 75  ctgncgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggggctacag 134
           ||| |||||| |||||||||||||||||||||||||||||||| ||||| || ||||| |
Sbjct: 68  ctgtcgctggctatccagaggcacaccctgaggtaatactaggcgaggaaggtgctacgg 127

                                                                       
Query: 135 aggaagcatatagcacaagatcttgcttacttgaagagaaaggttgatgctggcgctgac 194
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 128 aggaagcatatagca-aagatcttgcttacttgaagagaaaggttgatgctggtgctgac 186

                   
Query: 195 gttatagt 202
           ||||||||
Sbjct: 187 gttatagt 194
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>gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reductase mRNA, complete cds
          Length = 2225

 Score =  174 bits (88), Expect = 7e-41
 Identities = 166/192 (86%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   ggattttcttgngctctanatctggtgcagcatattagagccaagtntggtgattacttt 67
           |||||| |||| |||||  || ||||||||||||||||||||||||  |||||||| |||
Sbjct: 455 ggatttgcttgtgctcttgatttggtgcagcatattagagccaagtacggtgattatttt 514

                                                                       
Query: 68  ggcataactgncgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggg 127
           ||||||||||  ||||| |||||||||||||||||||| |  |||| ||| ||||  || 
Sbjct: 515 ggcataactgtagctggttatccagaggcacaccctgatgcgatacaaggcgagggaggt 574

                                                                       
Query: 128 gctacagaggaagcatatagcacaagatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||  |||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 575 gctacattggaagcatatagca-atgatcttgcgtacttgaagagaaaggttgatgctgg 633

                       
Query: 188 cgctgacgttat 199
            |||||| ||||
Sbjct: 634 tgctgaccttat 645
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>gb|AY109096.1| Zea mays PCO119715 mRNA sequence
          Length = 2423

 Score =  174 bits (88), Expect = 7e-41
 Identities = 166/192 (86%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   ggattttcttgngctctanatctggtgcagcatattagagccaagtntggtgattacttt 67
           |||||| |||| |||||  || ||||||||||||||||||||||||  |||||||| |||
Sbjct: 438 ggatttgcttgtgctcttgatttggtgcagcatattagagccaagtacggtgattatttt 497

                                                                       
Query: 68  ggcataactgncgctgggtatccagaggcacaccctgaggtaatactaggtgaggacggg 127
           ||||||||||  ||||| |||||||||||||||||||| |  |||| ||| ||||  || 
Sbjct: 498 ggcataactgtagctggttatccagaggcacaccctgatgcgatacaaggcgagggaggt 557

                                                                       
Query: 128 gctacagaggaagcatatagcacaagatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||  |||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct: 558 gctacattggaagcatatagca-atgatcttgcgtacttgaagagaaaggttgatgctgg 616

                       
Query: 188 cgctgacgttat 199
            |||||| ||||
Sbjct: 617 tgctgaccttat 628
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>ref|XM_470089.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2167

 Score =  109 bits (55), Expect = 3e-21
 Identities = 163/199 (81%), Gaps = 1/199 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgctggtggattttcttgngctctanatctggtgcagcatattagagccaagtntggtga 60
           ||||||||||||  |||| |||||  || |||| || || ||||||||||||| ||||||
Sbjct: 438 tgctggtggattcgcttgtgctcttgatttggtacaacacattagagccaagtatggtga 497

                                                                       
Query: 61  ttactttggcataactgncgctgggtatccagaggcacaccctgaggtaatactaggtga 120
           ||| ||||| || ||||  ||||| ||||||||||| ||||| || | ||||| | ||  
Sbjct: 498 ttattttggtattactgttgctggttatccagaggcccacccggatgcaatacaaagtac 557

                                                                       
Query: 121 ggacggggctacagaggaagcatatagcacaagatcttgcttacttgaagagaaaggttg 180
           ||| |||||||||   |||||||| |||| | ||||||||||| ||||||  ||||||||
Sbjct: 558 ggaaggggctacaccagaagcatacagca-atgatcttgcttatttgaagcaaaaggttg 616

                              
Query: 181 atgctggcgctgacgttat 199
           ||||||| |||||| ||||
Sbjct: 617 atgctggtgctgaccttat 635
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>dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O06, full
           insert sequence
          Length = 2169

 Score =  109 bits (55), Expect = 3e-21
 Identities = 163/199 (81%), Gaps = 1/199 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgctggtggattttcttgngctctanatctggtgcagcatattagagccaagtntggtga 60
           ||||||||||||  |||| |||||  || |||| || || ||||||||||||| ||||||
Sbjct: 439 tgctggtggattcgcttgtgctcttgatttggtacaacacattagagccaagtatggtga 498

                                                                       
Query: 61  ttactttggcataactgncgctgggtatccagaggcacaccctgaggtaatactaggtga 120
           ||| ||||| || ||||  ||||| ||||||||||| ||||| || | ||||| | ||  
Sbjct: 499 ttattttggtattactgttgctggttatccagaggcccacccggatgcaatacaaagtac 558

                                                                       
Query: 121 ggacggggctacagaggaagcatatagcacaagatcttgcttacttgaagagaaaggttg 180
           ||| |||||||||   |||||||| |||| | ||||||||||| ||||||  ||||||||
Sbjct: 559 ggaaggggctacaccagaagcatacagca-atgatcttgcttatttgaagcaaaaggttg 617

                              
Query: 181 atgctggcgctgacgttat 199
           ||||||| |||||| ||||
Sbjct: 618 atgctggtgctgaccttat 636
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>ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
           (NADPH) AT3G59970 (MTHFR1) transcript variant
           AT3G59970.2 mRNA, complete cds
          Length = 1708

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 153 gatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||||||||||||||| |||||||||||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctgg 639



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggc 96
           ||||| ||||||||||||||| || ||||  ||||| ||||| |||||
Sbjct: 502 caagtatggtgattactttggaatcactgttgctggttatcctgaggc 549
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>ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
           (NADPH) AT3G59970 (MTHFR1) transcript variant
           AT3G59970.3 mRNA, complete cds
          Length = 2021

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 153 gatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||||||||||||||| |||||||||||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctgg 639



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggc 96
           ||||| ||||||||||||||| || ||||  ||||| ||||| |||||
Sbjct: 502 caagtatggtgattactttggaatcactgttgctggttatcctgaggc 549
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>ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
           (NADPH) AT3G59970 (MTHFR1) transcript variant
           AT3G59970.1 mRNA, complete cds
          Length = 2116

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 153 gatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||||||||||||||| |||||||||||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctgg 639



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggc 96
           ||||| ||||||||||||||| || ||||  ||||| ||||| |||||
Sbjct: 502 caagtatggtgattactttggaatcactgttgctggttatcctgaggc 549
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>gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
           MTHFR1 (At3g59970) mRNA, complete cds
          Length = 1810

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 153 gatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||||||||||||||| |||||||||||||||
Sbjct: 523 gatcttgcttacttgaagaaaaaggttgatgctgg 557



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggc 96
           ||||| ||||||||||||||| || ||||  ||||| ||||| |||||
Sbjct: 420 caagtatggtgattactttggaatcactgttgctggttatcctgaggc 467
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>gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
           MTHFR1 (At3g59970) mRNA, complete cds
          Length = 2002

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 153 gatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||||||||||||||| |||||||||||||||
Sbjct: 605 gatcttgcttacttgaagaaaaaggttgatgctgg 639



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggc 96
           ||||| ||||||||||||||| || ||||  ||||| ||||| |||||
Sbjct: 502 caagtatggtgattactttggaatcactgttgctggttatcctgaggc 549
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>gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR1
           mRNA, complete cds
          Length = 1994

 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 153 gatcttgcttacttgaagagaaaggttgatgctgg 187
           ||||||||||||||||||| |||||||||||||||
Sbjct: 585 gatcttgcttacttgaagaaaaaggttgatgctgg 619



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggc 96
           ||||| ||||||||||||||| || ||||  ||||| ||||| |||||
Sbjct: 482 caagtatggtgattactttggaatcactgttgctggttatcctgaggc 529
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>ref|NM_129979.2| Arabidopsis thaliana MTHFR2; methylenetetrahydrofolate reductase
           (NADPH) AT2G44160 (MTHFR2) mRNA, complete cds
          Length = 2037

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggcacaccctga 105
           ||||| ||||||||||||||| || |||| |||||| ||||| ||||| || |||||
Sbjct: 511 caagtatggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 567
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>emb|AJ245414.1|ATH245414 Arabidopsis thaliana mRNA for methylenetetrahydrofolate reductase
          Length = 2037

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggcacaccctga 105
           ||||| ||||||||||||||| || |||| |||||| ||||| ||||| || |||||
Sbjct: 487 caagtatggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 543
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>gb|AY050434.1| Arabidopsis thaliana At2g44160/F6E13.29 mRNA, complete cds
          Length = 1917

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggcacaccctga 105
           ||||| ||||||||||||||| || |||| |||||| ||||| ||||| || |||||
Sbjct: 460 caagtatggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 516
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>gb|AF370515.1|AF370515 Arabidopsis thaliana putative methylenetetrahydrofolate reductase
           (At2g44160; F6E13.29) mRNA, complete cds
          Length = 2034

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggcacaccctga 105
           ||||| ||||||||||||||| || |||| |||||| ||||| ||||| || |||||
Sbjct: 510 caagtatggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 566
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>gb|AF181967.1|AF181967 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR2
           mRNA, complete cds
          Length = 1897

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 49  caagtntggtgattactttggcataactgncgctgggtatccagaggcacaccctga 105
           ||||| ||||||||||||||| || |||| |||||| ||||| ||||| || |||||
Sbjct: 420 caagtatggtgattactttggtatcactgtcgctggttatcctgaggcgcatcctga 476
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                    
Query: 41       attagagccaagtntggtgattactttggcataactgncgctgggtatccag 92
                ||||||||||||| ||||||||| ||||| || ||||  ||||| |||||||
Sbjct: 33867431 attagagccaagtatggtgattattttggtattactgttgctggttatccag 33867380
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>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence,
            complete sequence
          Length = 159795

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                
Query: 41   attagagccaagtntggtgattactttggcataactgncgctgggtatccag 92
            ||||||||||||| ||||||||| ||||| || ||||  ||||| |||||||
Sbjct: 5809 attagagccaagtatggtgattattttggtattactgttgctggttatccag 5860
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>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence,
            complete sequence
          Length = 27024

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 41   attagagccaagtntggtgattactttggcataactgncgctgggtatccag 92
            ||||||||||||| ||||||||| ||||| || ||||  ||||| |||||||
Sbjct: 1633 attagagccaagtatggtgattattttggtattactgttgctggttatccag 1582
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                    
Query: 41       attagagccaagtntggtgattactttggcataactgncgctgggtatccag 92
                ||||||||||||| ||||||||| ||||| || ||||  ||||| |||||||
Sbjct: 33957903 attagagccaagtatggtgattattttggtattactgttgctggttatccag 33957852
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>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07,
             complete sequence
          Length = 109741

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 49    caagtntggtgattactttggcataactgncgctgggtatcc 90
             ||||| ||||||||||||||| || |||| |||||| |||||
Sbjct: 92987 caagtatggtgattactttggtatcactgtcgctggttatcc 93028
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>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16
          Length = 100906

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 153   gatcttgcttacttgaagagaaaggtt 179
             ||||||||||||||||||| |||||||
Sbjct: 84747 gatcttgcttacttgaagaaaaaggtt 84773



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 36/42 (85%)
 Strand = Plus / Plus

                                                       
Query: 49    caagtntggtgattactttggcataactgncgctgggtatcc 90
             ||||| ||||||||||||||| || ||||  ||||| |||||
Sbjct: 84552 caagtatggtgattactttggaatcactgttgctggttatcc 84593
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>emb|AL160192.3|CNS01RGU Human chromosome 14 DNA sequence BAC R-226P1 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185228

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 131   acagaggaagcatatagcacaa 152
             ||||||||||||||||||||||
Sbjct: 19825 acagaggaagcatatagcacaa 19804
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>gb|AC142271.3| Mus musculus chromosome 5 clone RP24-69A21, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ccagaggcacaccctgaggt 108
             ||||||||||||||||||||
Sbjct: 17588 ccagaggcacaccctgaggt 17607
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>gb|AC172742.2| Medicago truncatula chromosome 7 BAC clone mth2-16i6, complete sequence
          Length = 112680

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   atatagcacaagatcttgct 161
             ||||||||||||||||||||
Sbjct: 33576 atatagcacaagatcttgct 33595
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 164     cttgaagagaaaggttgatgctgg 187
               ||||||||| ||||||||||||||
Sbjct: 1966567 cttgaagaggaaggttgatgctgg 1966544


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,229,347
Number of Sequences: 3902068
Number of extensions: 1229347
Number of successful extensions: 79074
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78981
Number of HSP's gapped (non-prelim): 88
length of query: 202
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 180
effective length of database: 17,147,199,772
effective search space: 3086495958960
effective search space used: 3086495958960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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