| Clone Name | basd17a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 167 bits (84), Expect = 5e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 382 ggcgctggggacgacggcaactccgcgccgcttcctgagacggtgcaaattggaaattca 441 ||||| || |||||||| | | |||||||||| || |||||||| ||||| ||||||||| Sbjct: 139 ggcgccggcgacgacgggagccccgcgccgctcccggagacggtacaaatcggaaattca 198 Query: 442 ccaacctataagcttggaaggaagcttggaaagggtggatttggacaagtatatgttggt 501 ||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 199 ccaacgtataagcttgagaggaagcttggaaagggaggatttggacaagtatacgttggc 258 Query: 502 cgacgtgtttcctctcccagtcttggtgatagaaaccctggtgcaaatgctttggaggtt 561 || ||| |||||||||| | || |||| | ||||| ||||||||||||| || |||||| Sbjct: 259 cggcgtatttcctctcctactcatggtaacagaaattctggtgcaaatgcattagaggtt 318 Query: 562 gcattaaagtttgaacatcgaacc 585 || |||| || |||||||||||| Sbjct: 319 gcgctaaaattcgaacatcgaacc 342 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 gcgcgccgaggccgtggaaagc 239 |||||||||||||||||||||| Sbjct: 7 gcgcgccgaggccgtggaaagc 28
>dbj|AK103403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C13, full insert sequence Length = 2211 Score = 167 bits (84), Expect = 5e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 382 ggcgctggggacgacggcaactccgcgccgcttcctgagacggtgcaaattggaaattca 441 ||||| || |||||||| | | |||||||||| || |||||||| ||||| ||||||||| Sbjct: 345 ggcgccggcgacgacgggagccccgcgccgctcccggagacggtacaaatcggaaattca 404 Query: 442 ccaacctataagcttggaaggaagcttggaaagggtggatttggacaagtatatgttggt 501 ||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 405 ccaacgtataagcttgagaggaagcttggaaagggaggatttggacaagtatacgttggc 464 Query: 502 cgacgtgtttcctctcccagtcttggtgatagaaaccctggtgcaaatgctttggaggtt 561 || ||| |||||||||| | || |||| | ||||| ||||||||||||| || |||||| Sbjct: 465 cggcgtatttcctctcctactcatggtaacagaaattctggtgcaaatgcattagaggtt 524 Query: 562 gcattaaagtttgaacatcgaacc 585 || |||| || |||||||||||| Sbjct: 525 gcgctaaaattcgaacatcgaacc 548 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 218 gcgcgccgaggccgtggaaagc 239 |||||||||||||||||||||| Sbjct: 213 gcgcgccgaggccgtggaaagc 234
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 427 caaattggaaattcaccaacctataagcttggaaggaagcttggaaagggtggatttgga 486 ||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct: 5332951 caaatcggaaattcaccaacgtataagcttgagaggaagcttggaaagggaggatttgga 5332892 Query: 487 caagtatatgttggtcgacgtgtttcctctcccagtcttggtgatagaaaccctggtgca 546 |||||||| ||||| || ||| |||||||||| | || |||| | ||||| |||||||| Sbjct: 5332891 caagtatacgttggccggcgtatttcctctcctactcatggtaacagaaattctggtgca 5332832 Query: 547 aatgctttggaggt 560 ||||| || ||||| Sbjct: 5332831 aatgcattagaggt 5332818 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 463 aagcttggaaagggtggatttggacaagtatatgttgg 500 |||||||| || || |||||||| |||||||||||||| Sbjct: 31108225 aagcttggtaaaggaggatttggccaagtatatgttgg 31108188 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 gcgcgccgaggccgtggaaagc 239 |||||||||||||||||||||| Sbjct: 5334308 gcgcgccgaggccgtggaaagc 5334287
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 427 caaattggaaattcaccaacctataagcttggaaggaagcttggaaagggtggatttgga 486 ||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct: 84295 caaatcggaaattcaccaacgtataagcttgagaggaagcttggaaagggaggatttgga 84236 Query: 487 caagtatatgttggtcgacgtgtttcctctcccagtcttggtgatagaaaccctggtgca 546 |||||||| ||||| || ||| |||||||||| | || |||| | ||||| |||||||| Sbjct: 84235 caagtatacgttggccggcgtatttcctctcctactcatggtaacagaaattctggtgca 84176 Query: 547 aatgctttggaggt 560 ||||| || ||||| Sbjct: 84175 aatgcattagaggt 84162 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 gcgcgccgaggccgtggaaagc 239 |||||||||||||||||||||| Sbjct: 85652 gcgcgccgaggccgtggaaagc 85631
>dbj|AP003244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0419B01 Length = 149610 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Minus Query: 427 caaattggaaattcaccaacctataagcttggaaggaagcttggaaagggtggatttgga 486 ||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||||||| Sbjct: 128202 caaatcggaaattcaccaacgtataagcttgagaggaagcttggaaagggaggatttgga 128143 Query: 487 caagtatatgttggtcgacgtgtttcctctcccagtcttggtgatagaaaccctggtgca 546 |||||||| ||||| || ||| |||||||||| | || |||| | ||||| |||||||| Sbjct: 128142 caagtatacgttggccggcgtatttcctctcctactcatggtaacagaaattctggtgca 128083 Query: 547 aatgctttggaggt 560 ||||| || ||||| Sbjct: 128082 aatgcattagaggt 128069 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 gcgcgccgaggccgtggaaagc 239 |||||||||||||||||||||| Sbjct: 129559 gcgcgccgaggccgtggaaagc 129538
>ref|XM_476111.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1827 Score = 109 bits (55), Expect = 1e-20 Identities = 160/195 (82%) Strand = Plus / Plus Query: 391 gacgacggcaactccgcgccgcttcctgagacggtgcaaattggaaattcaccaacctat 450 |||||||| | |||| ||||||| || |||||||| ||| ||| |||||||| || || Sbjct: 58 gacgacgggagctccacgccgctccccgagacggtccaagttgccaattcacctacttac 117 Query: 451 aagcttggaaggaagcttggaaagggtggatttggacaagtatatgttggtcgacgtgtt 510 || |||| || ||||| |||||||| |||||||| ||||||||||||||||| ||| || Sbjct: 118 aaacttgatagaaagctgggaaagggaggatttgggcaagtatatgttggtcggcgtatt 177 Query: 511 tcctctcccagtcttggtgatagaaaccctggtgcaaatgctttggaggttgcattaaag 570 |||||||| || || || || | ||||| ||||||||||||||||| ||| |||| Sbjct: 178 tcctctcctggtgttaccgacaggacacctggagcaaatgctttggaggtggcaataaaa 237 Query: 571 tttgaacatcgaacc 585 ||||||||||||||| Sbjct: 238 tttgaacatcgaacc 252
>dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K12, full insert sequence Length = 2696 Score = 109 bits (55), Expect = 1e-20 Identities = 160/195 (82%) Strand = Plus / Plus Query: 391 gacgacggcaactccgcgccgcttcctgagacggtgcaaattggaaattcaccaacctat 450 |||||||| | |||| ||||||| || |||||||| ||| ||| |||||||| || || Sbjct: 326 gacgacgggagctccacgccgctccccgagacggtccaagttgccaattcacctacttac 385 Query: 451 aagcttggaaggaagcttggaaagggtggatttggacaagtatatgttggtcgacgtgtt 510 || |||| || ||||| |||||||| |||||||| ||||||||||||||||| ||| || Sbjct: 386 aaacttgatagaaagctgggaaagggaggatttgggcaagtatatgttggtcggcgtatt 445 Query: 511 tcctctcccagtcttggtgatagaaaccctggtgcaaatgctttggaggttgcattaaag 570 |||||||| || || || || | ||||| ||||||||||||||||| ||| |||| Sbjct: 446 tcctctcctggtgttaccgacaggacacctggagcaaatgctttggaggtggcaataaaa 505 Query: 571 tttgaacatcgaacc 585 ||||||||||||||| Sbjct: 506 tttgaacatcgaacc 520
>dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126I12, full insert sequence Length = 2431 Score = 109 bits (55), Expect = 1e-20 Identities = 160/195 (82%) Strand = Plus / Plus Query: 391 gacgacggcaactccgcgccgcttcctgagacggtgcaaattggaaattcaccaacctat 450 |||||||| | |||| ||||||| || |||||||| ||| ||| |||||||| || || Sbjct: 323 gacgacgggagctccacgccgctccccgagacggtccaagttgccaattcacctacttac 382 Query: 451 aagcttggaaggaagcttggaaagggtggatttggacaagtatatgttggtcgacgtgtt 510 || |||| || ||||| |||||||| |||||||| ||||||||||||||||| ||| || Sbjct: 383 aaacttgatagaaagctgggaaagggaggatttgggcaagtatatgttggtcggcgtatt 442 Query: 511 tcctctcccagtcttggtgatagaaaccctggtgcaaatgctttggaggttgcattaaag 570 |||||||| || || || || | ||||| ||||||||||||||||| ||| |||| Sbjct: 443 tcctctcctggtgttaccgacaggacacctggagcaaatgctttggaggtggcaataaaa 502 Query: 571 tttgaacatcgaacc 585 ||||||||||||||| Sbjct: 503 tttgaacatcgaacc 517
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 463 aagcttggaaagggtggatttggacaagtatatgttggtcgacgtgtttcctctcc 518 ||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 145998 aagctgggaaagggaggatttgggcaagtatatgttggtcggcgtatttcctctcc 145943
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 463 aagcttggaaagggtggatttggacaagtatatgttggtcgacgtgtttcctctcc 518 ||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 28784 aagctgggaaagggaggatttgggcaagtatatgttggtcggcgtatttcctctcc 28729
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 463 aagcttggaaagggtggatttggacaagtatatgttggtcgacgtgtttcctctcc 518 ||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 6198429 aagctgggaaagggaggatttgggcaagtatatgttggtcggcgtatttcctctcc 6198374
>gb|AC159534.11| Medicago truncatula clone mth2-81a23, complete sequence Length = 120504 Score = 48.1 bits (24), Expect = 0.033 Identities = 39/44 (88%) Strand = Plus / Plus Query: 460 aggaagcttggaaagggtggatttggacaagtatatgttggtcg 503 |||||||| || || || |||||||||||||| ||||||||||| Sbjct: 65839 aggaagctagggaaaggaggatttggacaagtttatgttggtcg 65882
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagtat 493 |||||||||||||||||||| |||||| Sbjct: 63879 ttggaaagggtggatttggagaagtat 63853 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagt 491 ||||||| ||||||||||||||||| Sbjct: 1649 ttggaaaaggtggatttggacaagt 1625
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 462 gaagcttggaaagggtggatttggacaagtatatgttgg 500 ||||||||| || ||||| ||||| |||||||||||||| Sbjct: 104098 gaagcttgggaaaggtggttttggccaagtatatgttgg 104060
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagtat 493 |||||||||||||||||||| |||||| Sbjct: 624 ttggaaagggtggatttggagaagtat 598
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagtat 493 |||||||||||||||||||| |||||| Sbjct: 19823563 ttggaaagggtggatttggagaagtat 19823537 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagt 491 ||||||| ||||||||||||||||| Sbjct: 19761041 ttggaaaaggtggatttggacaagt 19761017
>dbj|AK102853.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110K06, full insert sequence Length = 2257 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 467 ttggaaagggtggatttggacaagtat 493 |||||||||||||||||||| |||||| Sbjct: 408 ttggaaagggtggatttggagaagtat 434
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagtat 493 |||||||||||||||||||| |||||| Sbjct: 20108536 ttggaaagggtggatttggagaagtat 20108510 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagt 491 ||||||| ||||||||||||||||| Sbjct: 20046306 ttggaaaaggtggatttggacaagt 20046282
>ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.1 mRNA, complete cds Length = 2604 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 475 ggtggatttggacaagtatatgttggtcga 504 ||||| ||||||||||| |||||||||||| Sbjct: 618 ggtggttttggacaagtttatgttggtcga 647
>ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.2 mRNA, complete cds Length = 2613 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 475 ggtggatttggacaagtatatgttggtcga 504 ||||| ||||||||||| |||||||||||| Sbjct: 618 ggtggttttggacaagtttatgttggtcga 647
>ref|NM_191171.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 463 aagcttggaaagggtggatttggacaagtatatgttgg 500 |||||||| || || |||||||| |||||||||||||| Sbjct: 346 aagcttggtaaaggaggatttggccaagtatatgttgg 383
>gb|AC102101.7| Mus musculus chromosome 15, clone RP23-74N15, complete sequence Length = 191261 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggc 384 |||||||||||||||||||||| Sbjct: 52883 cggccccgccccgggccccggc 52904
>ref|XM_127961.7| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene (4930461P20Rik), mRNA Length = 2137 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggc 384 |||||||||||||||||||||| Sbjct: 201 cggccccgccccgggccccggc 222
>ref|XM_906184.2| PREDICTED: Mus musculus RIKEN cDNA 4930461P20 gene (4930461P20Rik), mRNA Length = 2139 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggc 384 |||||||||||||||||||||| Sbjct: 201 cggccccgccccgggccccggc 222
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 ggtggcgcgcgccgaggccgtg 233 |||||||||||||||||||||| Sbjct: 108600 ggtggcgcgcgccgaggccgtg 108621
>gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence Length = 2695 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 475 ggtggatttggacaagtatatgttggtcga 504 ||||| ||||||||||| |||||||||||| Sbjct: 618 ggtggttttggacaagtttatgttggtcga 647
>emb|AJ295059.1|SME295059 Sinorhizobium meliloti ada gene, ORF1 and lpd gene (partial) Length = 1902 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 212 ggtggcgcgcgccgaggccgtg 233 |||||||||||||||||||||| Sbjct: 1243 ggtggcgcgcgccgaggccgtg 1264
>gb|AC087113.11| Mus Musculus Strain C57BL6/J Chromosome 15 BAC, RP23-99A15, Complete Sequence, complete sequence Length = 223882 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggc 384 |||||||||||||||||||||| Sbjct: 724 cggccccgccccgggccccggc 745
>ref|NM_022119.3| Homo sapiens protease, serine, 22 (PRSS22), mRNA Length = 1391 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 1261 ccggccccgccccgggccccagcgct 1286
>emb|CR626637.1| full-length cDNA clone CS0DI009YL20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1037 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 915 ccggccccgccccgggccccagcgct 940
>emb|CR608374.1| full-length cDNA clone CS0DI006YB15 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1358 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 1247 ccggccccgccccgggccccagcgct 1272
>emb|CR591551.1| full-length cDNA clone CS0DI006YA17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1362 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 1252 ccggccccgccccgggccccagcgct 1277
>dbj|AB010779.1| Homo sapiens hBSSP-4 mRNA for brain-specific serine protease-4, complete cds Length = 1306 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 1198 ccggccccgccccgggccccagcgct 1223
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 475 ggtggatttggacaagtatatgttggtcga 504 ||||| ||||||||||| |||||||||||| Sbjct: 87843 ggtggttttggacaagtttatgttggtcga 87872
>dbj|AK140224.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230354J24 product:hypothetical protein, full insert sequence Length = 709 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggc 384 |||||||||||||||||||||| Sbjct: 117 cggccccgccccgggccccggc 138
>gb|AF321182.1|AF321182 Homo sapiens serine protease PRSS22 mRNA, complete cds Length = 1332 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 1212 ccggccccgccccgggccccagcgct 1237
>gb|AC025154.31| Homo sapiens 12 BAC RP11-469H8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164813 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 361 gccggccccgccccgggccccggcgctggg 390 ||||||||| ||| |||||||||||||||| Sbjct: 103333 gccggccccacccggggccccggcgctggg 103304
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 463 aagcttggaaagggtggatttggacaagtatatgttgg 500 |||||||| || || |||||||| |||||||||||||| Sbjct: 165204 aagcttggtaaaggaggatttggccaagtatatgttgg 165167
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Minus Query: 463 aagcttggaaagggtggatttggacaagtatatgttgg 500 |||||||| || || |||||||| |||||||||||||| Sbjct: 34570 aagcttggtaaaggaggatttggccaagtatatgttgg 34533
>emb|AJ333353.1|HSA333353 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LL7C Length = 776 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 361 gccggccccgccccgggccccggcgctggg 390 ||||||||| ||| |||||||||||||||| Sbjct: 70 gccggccccacccggggccccggcgctggg 99
>dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N21, full insert sequence Length = 2398 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 463 aagcttggaaagggtggatttggacaagtatatgttgg 500 |||||||| || || |||||||| |||||||||||||| Sbjct: 406 aagcttggtaaaggaggatttggccaagtatatgttgg 443
>gb|AC003965.1|AC003965 Homo sapiens chromosome 16, cosmid clone 325D7, complete sequence Length = 34642 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccggcgct 387 |||||||||||||||||||| ||||| Sbjct: 20770 ccggccccgccccgggccccagcgct 20795
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 478 ggatttggacaagtatatgttggtcg 503 |||||||||||||| ||||||||||| Sbjct: 32615 ggatttggacaagtttatgttggtcg 32640
>ref|XM_636910.1| Dictyostelium discoideum putative AGC family protein kinase (DDB0206232), partial mRNA Length = 4200 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 agggtggatttggacaagtat 493 ||||||||||||||||||||| Sbjct: 2438 agggtggatttggacaagtat 2458
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 467 ttggaaagggtggatttggacaagt 491 ||||||| ||||||||||||||||| Sbjct: 116028 ttggaaaaggtggatttggacaagt 116004
>ref|XM_877145.1| PREDICTED: Bos taurus hypothetical protein LOC614369 (LOC614369), mRNA Length = 459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 ccggccccgccccgggccccg 382 ||||||||||||||||||||| Sbjct: 302 ccggccccgccccgggccccg 322
>gb|AC152166.4| Mus musculus BAC clone RP23-425A3 from chromosome 7, complete sequence Length = 216652 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 tttcctctcccagtcttggtg 529 ||||||||||||||||||||| Sbjct: 201120 tttcctctcccagtcttggtg 201100
>ref|NM_001031841.1| Danio rerio G-protein-coupled receptor kinase 7a (grk7a), mRNA Length = 1789 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 cttggaaagggtggatttgga 486 ||||||||||||||||||||| Sbjct: 649 cttggaaagggtggatttgga 669
>gb|CP000355.1| Ralstonia metallidurans CH34 plasmid pMOL28, complete sequence Length = 171459 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 cgagccgcgaggtatccgcac 292 ||||||||||||||||||||| Sbjct: 16344 cgagccgcgaggtatccgcac 16364
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence Length = 205352 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 509 tttcctctcccagtcttggtg 529 ||||||||||||||||||||| Sbjct: 190141 tttcctctcccagtcttggtg 190161
>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence Length = 242222 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 cgccggccccgccccgggccccggc 384 ||||||||||| ||||||||||||| Sbjct: 181611 cgccggccccggcccgggccccggc 181587
>ref|XM_948514.1| Theileria annulata strain Ankara serine/threonine protein kinase (TA16695) partial mRNA Length = 4242 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 gcttggaaagggtggatttgg 485 ||||||||||||||||||||| Sbjct: 2907 gcttggaaagggtggatttgg 2927
>ref|NM_003458.2| Homo sapiens bassoon (presynaptic cytomatrix protein) (BSN), mRNA Length = 15966 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 cgccggccccgccccgggccccggc 384 ||||||||||| ||||||||||||| Sbjct: 174 cgccggccccggcccgggccccggc 198
>emb|X90708.2|AEPARREPG Ralstonia metallidurans CH34 plasmid pMOL28 Length = 171461 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 cgagccgcgaggtatccgcac 292 ||||||||||||||||||||| Sbjct: 128392 cgagccgcgaggtatccgcac 128372
>gb|AY900004.1| Danio rerio G-protein-coupled receptor kinase 7a (grk7a) mRNA, complete cds Length = 1789 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 cttggaaagggtggatttgga 486 ||||||||||||||||||||| Sbjct: 649 cttggaaagggtggatttgga 669
>emb|BX927346.12| Zebrafish DNA sequence from clone CH211-168M18 in linkage group 5, complete sequence Length = 141135 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 45220 agcttggaaggaagctgggaaaggg 45244
>emb|BX469906.11| Zebrafish DNA sequence from clone DKEY-127K9 in linkage group 2, complete sequence Length = 170409 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 cttggaaagggtggatttgga 486 ||||||||||||||||||||| Sbjct: 167119 cttggaaagggtggatttgga 167139
>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence Length = 186563 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 cgccggccccgccccgggccccggc 384 ||||||||||| ||||||||||||| Sbjct: 12796 cgccggccccggcccgggccccggc 12772
>dbj|AB212995.1| Danio rerio GRK7-1 mRNA for G protein-coupled receptor kinase 7-1, complete cds Length = 3150 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 cttggaaagggtggatttgga 486 ||||||||||||||||||||| Sbjct: 748 cttggaaagggtggatttgga 768
>emb|BX510309.11| Zebrafish DNA sequence from clone DKEY-252L17 in linkage group 5, complete sequence Length = 86558 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 14983 agcttggaaggaagctaggaaaggg 15007
>emb|BX510949.10| Zebrafish DNA sequence from clone DKEY-97E19 in linkage group 5, complete sequence Length = 109001 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 86638 agcttggaaggaagctaggaaaggg 86662
>emb|BX548073.8| Zebrafish DNA sequence from clone CH211-207C6, complete sequence Length = 222583 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 71408 agcttggaaggaagctgggaaaggg 71384
>emb|BX469907.11| Zebrafish DNA sequence from clone DKEY-32D10 in linkage group 5, complete sequence Length = 162623 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 72734 agcttggaaggaagctgggaaaggg 72758 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 4451 agcttggaaggaagctgggaaaggg 4475
>dbj|AK082801.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330022M23 product:unclassifiable, full insert sequence Length = 804 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 ggccccgccccgggccccggc 384 ||||||||||||||||||||| Sbjct: 175 ggccccgccccgggccccggc 195
>emb|BX323596.9| Zebrafish DNA sequence from clone DKEY-210G19 in linkage group 5, complete sequence Length = 251428 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 151453 agcttggaaggaagctaggaaaggg 151477
>gb|AC097713.3| Homo sapiens BAC clone RP11-251I17 from 2, complete sequence Length = 173790 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ccggccccgccccgggccccg 382 ||||||||||||||||||||| Sbjct: 1358 ccggccccgccccgggccccg 1338
>emb|AJ242714.1|HSA242714 Homo sapiens CDC25A gene, promoter region Length = 1178 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cggtggcgcgcgccgaggccg 231 ||||||||||||||||||||| Sbjct: 1103 cggtggcgcgcgccgaggccg 1123
>emb|CR377211.7| Zebrafish DNA sequence from clone DKEYP-13A3 in linkage group 2, complete sequence Length = 186342 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 cttggaaagggtggatttgga 486 ||||||||||||||||||||| Sbjct: 133788 cttggaaagggtggatttgga 133808
>gb|AF052224.1|AF052224 Homo sapiens neuronal double zinc finger protein (ZNF231) mRNA, complete cds Length = 15964 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 cgccggccccgccccgggccccggc 384 ||||||||||| ||||||||||||| Sbjct: 175 cgccggccccggcccgggccccggc 199
>emb|CT009619.5| Zebrafish DNA sequence from clone CH73-138I16 in linkage group 5, complete sequence Length = 29199 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 452 agcttggaaggaagcttggaaaggg 476 |||||||||||||||| |||||||| Sbjct: 19597 agcttggaaggaagctgggaaaggg 19621
>ref|NM_102475.2| Arabidopsis thaliana ATGSTU13 (GLUTATHIONE S-TRANSFERASE 12); glutathione transferase AT1G27130 (ATGSTU13) mRNA, complete cds Length = 1095 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 478 ccgaccaccgcatccaccgccgca 455
>ref|NM_001008718.1| Canis familiaris xylosyltransferase I (XYLT1), mRNA Length = 2853 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 gccggccccgccccgggccccggc 384 |||||||||||||| ||||||||| Sbjct: 168 gccggccccgcccccggccccggc 191
>ref|XM_130764.7| PREDICTED: Mus musculus TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor, transcript variant 1 (Taf4a), mRNA Length = 4422 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 cgccggccccgccccgggccccgg 383 ||||||||||| |||||||||||| Sbjct: 963 cgccggccccggcccgggccccgg 940
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ccacctcatccaccgccgca 92 |||||||||||||||||||| Sbjct: 1613 ccacctcatccaccgccgca 1594
>ref|XM_845442.1| PREDICTED: Canis familiaris similar to General transcription factor 3C polypeptide 4 (Transcription factor IIIC-delta subunit) (TF3C-delta) (TFIIIC 90 kDa subunit) (TFIIIC 90) (LOC608418), mRNA Length = 2469 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1369 gttgcattaaagtttgaaca 1388
>emb|AL121789.38|HSJ493H23 Human DNA sequence from clone RP3-493H23 on chromosome 6q26-27 Contains the 5' end of the PDE10A gene for phosphodiesterase 10A and a CpG island, complete sequence Length = 74227 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 gaaggaagcttggaaagggt 477 |||||||||||||||||||| Sbjct: 4793 gaaggaagcttggaaagggt 4774
>gb|BC095998.1| Mus musculus general transcription factor IIIC, polypeptide 4, mRNA (cDNA clone MGC:106303 IMAGE:30736671), complete cds Length = 3133 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1429 gttgcattaaagtttgaaca 1448
>emb|AJ866719.1| Canis familiaris mRNA for protein xylosyltransferase (xt-I gene) Length = 2853 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 gccggccccgccccgggccccggc 384 |||||||||||||| ||||||||| Sbjct: 168 gccggccccgcccccggccccggc 191
>gb|AC011475.6| Homo sapiens chromosome 19 clone CTC-539A10, complete sequence Length = 179953 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gccccgccccgggccccggc 384 |||||||||||||||||||| Sbjct: 125475 gccccgccccgggccccggc 125494
>emb|CR599708.1| full-length cDNA clone CS0DE005YH01 of Placenta of Homo sapiens (human) Length = 924 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ccggccccgccccgggcccc 381 |||||||||||||||||||| Sbjct: 58 ccggccccgccccgggcccc 39
>gb|DP000060.1| Atelerix albiventris target 117 genomic scaffold Length = 527158 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ctccccgtgtcttcccctcc 60 |||||||||||||||||||| Sbjct: 514609 ctccccgtgtcttcccctcc 514628
>gb|AY094051.1| Arabidopsis thaliana At1g27130/T7N9_190 mRNA, complete cds Length = 684 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 356 ccgaccaccgcatccaccgccgca 333
>dbj|AK146403.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730073N06 product:general transcription factor IIIC, polypeptide 4, full insert sequence Length = 3815 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1552 gttgcattaaagtttgaaca 1571
>dbj|AK146401.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730073K24 product:general transcription factor IIIC, polypeptide 4, full insert sequence Length = 3815 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1552 gttgcattaaagtttgaaca 1571
>ref|XM_946142.1| PREDICTED: Homo sapiens SH3 and multiple ankyrin repeat domains 3, transcript variant 4 (SHANK3), mRNA Length = 7366 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggcgc 386 |||||||| ||||||||||||||| Sbjct: 200 cggccccggcccgggccccggcgc 223
>ref|XM_037493.6| PREDICTED: Homo sapiens SH3 and multiple ankyrin repeat domains 3, transcript variant 1 (SHANK3), mRNA Length = 7366 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggcgc 386 |||||||| ||||||||||||||| Sbjct: 200 cggccccggcccgggccccggcgc 223
>dbj|AK141269.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430011K23 product:general transcription factor IIIC, polypeptide 4, full insert sequence Length = 5103 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1471 gttgcattaaagtttgaaca 1490
>dbj|AK150650.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013C23 product:general transcription factor IIIC, polypeptide 4, full insert sequence Length = 3145 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1472 gttgcattaaagtttgaaca 1491
>dbj|AK151179.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830026G12 product:general transcription factor IIIC, polypeptide 4, full insert sequence Length = 3145 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1472 gttgcattaaagtttgaaca 1491
>dbj|AK153102.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830122P18 product:general transcription factor IIIC, polypeptide 4, full insert sequence Length = 3145 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1472 gttgcattaaagtttgaaca 1491
>gb|AY044324.1| Arabidopsis thaliana putative glutathione transferase (At1g27130) mRNA, complete cds Length = 754 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 356 ccgaccaccgcatccaccgccgca 333
>gb|AY050343.1| Arabidopsis thaliana At1g27130/T7N9_190 mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 404 ccgaccaccgcatccaccgccgca 381
>gb|AC000050.22| Homo sapiens Chromosome 22q13 Cosmid Clone n66c4, complete sequence Length = 42167 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 cggccccgccccgggccccggcgc 386 |||||||| ||||||||||||||| Sbjct: 10805 cggccccggcccgggccccggcgc 10828
>dbj|AK047949.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130023D01 product:hypothetical protein, full insert sequence Length = 2536 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 cccagtcttggtgatagaaa 536 |||||||||||||||||||| Sbjct: 2147 cccagtcttggtgatagaaa 2166
>dbj|AK047698.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030013G15 product:weakly similar to TRANSCRIPTION FACTOR IIIC90 [Homo sapiens], full insert sequence Length = 2273 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 600 gttgcattaaagtttgaaca 619
>dbj|AK030351.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330400C03 product:TRANSCRIPTION FACTOR IIIC90 homolog [Homo sapiens], full insert sequence Length = 3672 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1417 gttgcattaaagtttgaaca 1436
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccggcgctggggacgacggc 399 |||||||||||||||||||| Sbjct: 6059560 ccggcgctggggacgacggc 6059579
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 cttggaaagggtggatttgg 485 |||||||||||||||||||| Sbjct: 28388693 cttggaaagggtggatttgg 28388674
>emb|BX817766.1|CNS0AB4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 818 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 381 ccgaccaccgcatccaccgccgca 358
>emb|BX841718.1|CNS09YIL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 791 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 404 ccgaccaccgcatccaccgccgca 427
>dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate oxidase, exon 1-3, complete cds Length = 1783 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 ggtggcgcgcgccgaggccg 231 |||||||||||||||||||| Sbjct: 1122 ggtggcgcgcgccgaggccg 1103
>gb|AF288193.1|AF288193 Arabidopsis thaliana chromosome I glutathione S-transferase (GST12) mRNA, complete cds Length = 684 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 356 ccgaccaccgcatccaccgccgca 333
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 ggccccgccccgggccccgg 383 |||||||||||||||||||| Sbjct: 5322263 ggccccgccccgggccccgg 5322244
>gb|AC000348.2|AC000348 Genomic sequence for Arabidopsis thaliana BAC T7N9 from chromosome I, complete sequence Length = 111566 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 67903 ccgaccaccgcatccaccgccgca 67880
>ref|NM_172977.1| Mus musculus general transcription factor IIIC, polypeptide 4 (Gtf3c4), mRNA Length = 3672 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 1417 gttgcattaaagtttgaaca 1436
>ref|XM_341667.2| PREDICTED: Rattus norvegicus growth factor receptor bound protein 2-associated protein 1 (predicted) (Gab1_predicted), mRNA Length = 5028 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 368 ccgccccgggccccggcgctggggacgacggc 399 ||||||||||||| |||||||||| |||||| Sbjct: 395 ccgccccgggcccgagcgctggggaagacggc 364
>gb|AY086946.1| Arabidopsis thaliana clone 2985 mRNA, complete sequence Length = 881 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ccgaccacctcatccaccgccgca 92 ||||||||| |||||||||||||| Sbjct: 412 ccgaccaccgcatccaccgccgca 389
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 cttggaaagggtggatttgg 485 |||||||||||||||||||| Sbjct: 101271 cttggaaagggtggatttgg 101252
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccggcgctggggacgacggc 399 |||||||||||||||||||| Sbjct: 114730 ccggcgctggggacgacggc 114749
>gb|AF079762.1|AF079762 Streptomyces venezuelae desosamine biosynthetic gene cluster, complete sequence Length = 12441 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gtcgtcaccgaccacctcatccac 85 |||| ||||||||||||||||||| Sbjct: 1631 gtcggcaccgaccacctcatccac 1654
>emb|CT030637.9| Mouse DNA sequence from clone RP23-123H11 on chromosome 14, complete sequence Length = 239552 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 cccagtcttggtgatagaaa 536 |||||||||||||||||||| Sbjct: 89288 cccagtcttggtgatagaaa 89269
>gb|AC171727.1| Lycopersicon esculentum chromosome 01 clone C01HBa0163B20, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 563 cattaaagtttgaacatcga 582 |||||||||||||||||||| Sbjct: 127113 cattaaagtttgaacatcga 127132
>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 360 cgccggccccgccccgggccccgg 383 ||||||||||| |||||||||||| Sbjct: 96558 cgccggccccggcccgggccccgg 96581
>emb|AL732526.8| Mouse DNA sequence from clone RP23-338O4 on chromosome 2, complete sequence Length = 165825 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 559 gttgcattaaagtttgaaca 578 |||||||||||||||||||| Sbjct: 62626 gttgcattaaagtttgaaca 62607
>dbj|AP003065.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-31L22, complete sequences Length = 190102 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ccggccccgccccgggcccc 381 |||||||||||||||||||| Sbjct: 177824 ccggccccgccccgggcccc 177843 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,898,535 Number of Sequences: 3902068 Number of extensions: 3898535 Number of successful extensions: 70206 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69692 Number of HSP's gapped (non-prelim): 514 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)