>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)|
          Length = 507

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 263 RKQTHNATQTQPQPGHRVRRPGDTTFVLPQVSFSLFLPIP 144
           ++Q     Q Q Q G +   PG   F+ PQ     F+P+P
Sbjct: 429 QEQQQQQQQQQGQQGQQQGYPGQQAFIPPQQGQPQFMPVP 468

>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor|
          Length = 263

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -1

Query: 320 PTFRSTHPTHSTYSNTTEYRKQTHNATQTQP-QPGHRVRRPGDTT 189
           PT RST   H+T + TT  R  T   T  +P       RRP  TT
Sbjct: 109 PTTRSTTTRHTTTTTTTTRRPTTTTTTTRRPTTTTTTTRRPTTTT 153



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 320 PTFRSTHPTHSTYSNTTEYRKQTHNATQTQPQP 222
           PT RST   H+T S T+  ++ TH  T T  +P
Sbjct: 159 PTTRSTTTRHTTKSTTS--KRPTHETTTTSKRP 189

>ENV_HV1MN (P05877) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 856

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 341 FFFSNLEPTFRSTHPTHSTYSNTT 270
           FF+ N  P F ST   ++T++NTT
Sbjct: 385 FFYCNTSPLFNSTWNGNNTWNNTT 408

>TERM_ADECR (Q96682) DNA terminal protein (Bellett protein) (pTP protein)|
          Length = 723

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 170 SFSLFLPIPMIPL*GGVFRAKQTETGMMIVRRQQEKKEELGE 45
           + SL  P P  PL GG F  +  E G  +    + ++ E+ E
Sbjct: 407 ALSLPGPAPCTPLSGGAFELRPRENGRAVTEEMRRRRGEMIE 448

>TERM_ADECC (Q65947) DNA terminal protein (Bellett protein) (pTP protein)|
          Length = 608

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -1

Query: 170 SFSLFLPIPMIPL*GGVFRAKQTETGMMIVRRQQEKKEELGE 45
           + SL  P P  PL GG F  +  E G  +    + ++ E+ E
Sbjct: 292 ALSLPGPAPCTPLSGGAFELRPRENGRAVTEEMRRRRGEMIE 333


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,156,771
Number of Sequences: 219361
Number of extensions: 634665
Number of successful extensions: 1700
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)