ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16k13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 660 bits (333), Expect = 0.0 Identities = 502/557 (90%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 80 gggaggaaggcgctggactacgaggagctcaacgagnaacgtcaagaaggtgcagtacgc 139 ||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 113 gggaggaagccgctggactacgaggagctgaacgag-aacgtgaagaaggtgcagtacgc 171 Query: 140 cgtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcat 199 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 172 ggtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcat 231 Query: 200 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 259 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 232 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 291 Query: 260 ggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatctt 319 ||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 292 ggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatctt 351 Query: 320 ccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccggcggcttagg 379 ||||||||| |||||||| ||||||||||||||||| || | |||||||| || |||| Sbjct: 352 ccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtggactagg 411 Query: 380 tgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattca 439 ||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| | Sbjct: 412 tgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcatcga 471 Query: 440 gaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaa 499 |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 472 gaggcgtgatggttatccaagtgatccagaacttatttacctcacagatggtgccagcaa 531 Query: 500 aggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttggtccc 559 |||||||||||||||||| || ||||||||||||| ||||| || |||||| |||| || Sbjct: 532 aggtgtgatgcaaatgctgaataccattatcagaaatgagagagatgggattctggttcc 591 Query: 560 tgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttgtccc 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 592 tgttccacaatacccgctttattctgctgccatttccctctttggtggttctctcgtgcc 651 Query: 620 atattatttggaagaag 636 ||| || || ||||||| Sbjct: 652 atactacttagaagaag 668
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 652 bits (329), Expect = 0.0 Identities = 501/557 (89%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 80 gggaggaaggcgctggactacgaggagctcaacgagnaacgtcaagaaggtgcagtacgc 139 ||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 64 gggaggaagccgctggactacgaggagctgaacgag-aacgtgaagaaggtgcagtacgc 122 Query: 140 cgtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcat 199 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 123 ggtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcat 182 Query: 200 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 259 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 183 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 242 Query: 260 ggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatctt 319 ||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 243 ggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatctt 302 Query: 320 ccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccggcggcttagg 379 ||||||||| |||||||| ||||||||||||||||| || | |||||||| || |||| Sbjct: 303 ccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtggactagg 362 Query: 380 tgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattca 439 ||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| | Sbjct: 363 tgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcatcga 422 Query: 440 gaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaa 499 |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 423 gaggcgtgatggttatccaagtgatccagaacttatttacctcacagatggtgccagcaa 482 Query: 500 aggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttggtccc 559 |||||||||||||||||| || ||||||||||||| ||||| || |||||| |||| || Sbjct: 483 aggtgtgatgcaaatgctgaataccattatcagaaatgagagagatgggattctggttcc 542 Query: 560 tgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttgtccc 619 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || Sbjct: 543 tgttccacaatacccgctttattctgctgccatttccccctttggtggttctctcgtgcc 602 Query: 620 atattatttggaagaag 636 ||| || || ||||||| Sbjct: 603 atactacttagaagaag 619
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 509 bits (257), Expect = e-141 Identities = 392/437 (89%) Strand = Plus / Plus Query: 200 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 259 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 1 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 60 Query: 260 ggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatctt 319 ||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||||| Sbjct: 61 ggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatctt 120 Query: 320 ccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccggcggcttagg 379 ||||||||| |||||||| ||||||||||||||||| || | |||||||| || |||| Sbjct: 121 ccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccggtggactagg 180 Query: 380 tgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattca 439 ||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| | Sbjct: 181 tgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcatcga 240 Query: 440 gaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaa 499 |||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 241 gaggcgtgatggttatccaagtgatccagaacttatttacctcacagatggtgccagcaa 300 Query: 500 aggtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttggtccc 559 |||||||||||||||||| || |||||||||||| ||||| || |||||| |||| || Sbjct: 301 aggtgtgatgcaaatgctgaataccattatcagaagtgagagagatgggattctggttcc 360 Query: 560 tgttccacaatacccgctttattctgctgccatttccctctttggtggttctcttgtccc 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 361 tgttccacaatacccgctttattctgctgccatttccctctttggtggttctctcgtgcc 420 Query: 620 atattatttggaagaag 636 ||| || || ||||||| Sbjct: 421 atactacttagaagaag 437
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 228 bits (115), Expect = 2e-56 Identities = 167/183 (91%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 80 gggaggaaggcgctggactacgaggagctcaacgagnaacgtcaagaaggtgcagtacgc 139 ||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 450138 gggaggaagccgctggactacgaggagctgaacgag-aacgtgaagaaggtgcagtacgc 450080 Query: 140 cgtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcat 199 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 450079 ggtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcat 450020 Query: 200 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 259 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 450019 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 449960 Query: 260 ggt 262 ||| Sbjct: 449959 ggt 449957 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 258 caggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatc 317 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 449877 caggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatc 449818 Query: 318 ttccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccgg 370 ||||||||||| |||||||| ||||||||||||||||| || | |||||||| Sbjct: 449817 ttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccgg 449765 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 459 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449386 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 449327 Query: 519 aacgccattatcagaaacgagag 541 || ||||||||||||| ||||| Sbjct: 449326 aataccattatcagaaatgagag 449304 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 548 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 607 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449184 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 449125 Query: 608 ttctcttgtcccatattatttggaagaag 636 |||||| || ||||| || || ||||||| Sbjct: 449124 ttctctcgtgccatactacttagaagaag 449096 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 377 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 436 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 449575 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 449516 Query: 437 tcagaggcgtgatgggtatcc 457 ||||||||||||| ||||| Sbjct: 449515 cgagaggcgtgatggttatcc 449495
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 228 bits (115), Expect = 2e-56 Identities = 167/183 (91%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 80 gggaggaaggcgctggactacgaggagctcaacgagnaacgtcaagaaggtgcagtacgc 139 ||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 52302 gggaggaagccgctggactacgaggagctgaacgag-aacgtgaagaaggtgcagtacgc 52244 Query: 140 cgtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcat 199 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 52243 ggtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcat 52184 Query: 200 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 259 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 52183 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 52124 Query: 260 ggt 262 ||| Sbjct: 52123 ggt 52121 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 258 caggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatc 317 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 52041 caggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatc 51982 Query: 318 ttccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccgg 370 ||||||||||| |||||||| ||||||||||||||||| || | |||||||| Sbjct: 51981 ttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccgg 51929 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 459 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51550 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 51491 Query: 519 aacgccattatcagaaacgagag 541 || ||||||||||||| ||||| Sbjct: 51490 aataccattatcagaaatgagag 51468 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 548 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 607 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51348 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 51289 Query: 608 ttctcttgtcccatattatttggaagaag 636 |||||| || ||||| || || ||||||| Sbjct: 51288 ttctctcgtgccatactacttagaagaag 51260 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 377 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 436 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 51739 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 51680 Query: 437 tcagaggcgtgatgggtatcc 457 ||||||||||||| ||||| Sbjct: 51679 cgagaggcgtgatggttatcc 51659
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 228 bits (115), Expect = 2e-56 Identities = 167/183 (91%), Gaps = 1/183 (0%) Strand = Plus / Minus Query: 80 gggaggaaggcgctggactacgaggagctcaacgagnaacgtcaagaaggtgcagtacgc 139 ||||||||| ||||||||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 4050 gggaggaagccgctggactacgaggagctgaacgag-aacgtgaagaaggtgcagtacgc 3992 Query: 140 cgtgcgcggcgagctctacctccgcgcatccgagctccagaaggagggcaagaggatcat 199 ||||| || ||||| ||||| ||||| ||||||||||||||||||||||||| |||||| Sbjct: 3991 ggtgcggggggagctgtacctgcgcgcctccgagctccagaaggagggcaagaagatcat 3932 Query: 200 cttcaccaacgtcggcaacccgcacgccctcggacagaagccactcaccttcccacgcca 259 ||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||| Sbjct: 3931 cttcaccaacgtcggcaacccacacgcgctcggccagaagccgctcaccttcccccgcca 3872 Query: 260 ggt 262 ||| Sbjct: 3871 ggt 3869 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Minus Query: 258 caggtggtggcgctctgccaggctcccttcctcctcgatgatcccaacgtcggtctcatc 317 ||||| |||||||| |||||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 3789 caggttgtggcgctgtgccaggcccccttcctgctcgatgatcccaacgtcggccttatc 3730 Query: 318 ttccccgccgatgccatcgcaagggccaagcactacctctccctcgcacccgg 370 ||||||||||| |||||||| ||||||||||||||||| || | |||||||| Sbjct: 3729 ttccccgccgacgccatcgcgcgggccaagcactacctcgccatggcacccgg 3677 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 459 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctc 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3298 agtgatccagaacttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctg 3239 Query: 519 aacgccattatcagaaacgagag 541 || ||||||||||||| ||||| Sbjct: 3238 aataccattatcagaaatgagag 3216 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 548 gattttggtccctgttccacaatacccgctttattctgctgccatttccctctttggtgg 607 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3096 gattctggttcctgttccacaatacccgctttattctgctgccatttccctctttggtgg 3037 Query: 608 ttctcttgtcccatattatttggaagaag 636 |||||| || ||||| || || ||||||| Sbjct: 3036 ttctctcgtgccatactacttagaagaag 3008 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Minus Query: 377 aggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcat 436 |||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||||||| Sbjct: 3487 aggtgcttacagtgattcccgaggtatccctggtattaggaaggaagtcgccgagttcat 3428 Query: 437 tcagaggcgtgatgggtatcc 457 ||||||||||||| ||||| Sbjct: 3427 cgagaggcgtgatggttatcc 3407
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 220 bits (111), Expect = 4e-54 Identities = 220/255 (86%), Gaps = 1/255 (0%) Strand = Plus / Minus Query: 382 cgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcattcaga 441 |||||||||||||||| || ||||| || ||||||||||||||||||| ||||| || | Sbjct: 1302 cgtacagtgactcccgcgg-atcccgggaatcaggaaggaagttgccgacttcatccaca 1244 Query: 442 ggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaaag 501 ||||||||| ||||| |||||||| || || || ||||||||||| ||||||||||||| Sbjct: 1243 agcgtgatggatatcccagtgatccggaactcatctacctcacagacggtgccagcaaag 1184 Query: 502 gtgtgatgcaaatgctcaacgccattatcagaaacgagagggacgggattttggtccctg 561 |||||||||| || || ||| |||| || |||||||||| ||||||||| |||||||||| Sbjct: 1183 gtgtgatgcagatcctgaacaccatcattagaaacgagatggacgggatcttggtccctg 1124 Query: 562 ttccacaatacccgctttattctgctgccatttccctctttggtggttctcttgtcccat 621 |||| || ||||| |||||||| || |||||||||||| |||||||||||| ||||| | Sbjct: 1123 ttcctcagtacccactttattccgccaccatttccctctatggtggttctctggtcccgt 1064 Query: 622 attatttggaagaag 636 | || |||||||||| Sbjct: 1063 actacttggaagaag 1049
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Plus Query: 171 gagctccagaaggagggcaagaggatcatcttcaccaacgtcggcaacccgcacgccctc 230 ||||| |||||||| || || | ||| || ||||| ||||| |||||||| || || || Sbjct: 94 gagcttcagaaggaagggaaaaagattattttcacaaacgtgggcaaccctcatgctcta 153 Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcccttcctc 290 |||||||| ||||| || || || ||||||||||| || || ||||| ||||| || || Sbjct: 154 ggacagaaaccactgacttttcctcgccaggtggttgctctatgccaagctccatttcta 213 Query: 291 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 350 | |||||||| || || || ||| | ||||| || ||||| || ||||| || || ||| Sbjct: 214 ttagatgatcctaatgtaggactcgtattcccagcagatgcaattgcaagagctaaacac 273 Query: 351 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 410 ||||| || | | | || || ||||||| || |||||||| |||||| | ||||| Sbjct: 274 tacctttcattgacttcgggtggtctaggtgcttatagtgactctcgaggtcttcctgga 333 Query: 411 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 470 | ||||||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 334 ataaggaaggaagtggcagagttcattgggaggcgtgatgggtatccaagtgatccagag 393 Query: 471 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctcaacgccattatc 530 || || | ||||| ||||||||||||||||| || ||||| || | || | |||||| Sbjct: 394 ctcatatttctcacggatggtgccagcaaaggagtaatgcagattttgaatacaattatc 453 Query: 531 agaaacgagagggacgggattttggtccctgttccacaatacccgctttattctgctgcc 590 | || ||||| ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct: 454 cgtggtgaaagggatgggattttggttcctgtcccacaatatccgctttactcagctgca 513 Query: 591 atttccctctttggtggttctcttgtcccatattatttggaaga 634 || || |||||||||||||||||||| ||||||||| ||||||| Sbjct: 514 atatctctctttggtggttctcttgttccatattatctggaaga 557
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 167 bits (84), Expect = 6e-38 Identities = 369/464 (79%) Strand = Plus / Plus Query: 171 gagctccagaaggagggcaagaggatcatcttcaccaacgtcggcaacccgcacgccctc 230 ||||| |||||||| || || | ||| || ||||| ||||| |||||||| || || || Sbjct: 94 gagcttcagaaggaagggaaaaagattattttcacaaacgtgggcaaccctcatgctcta 153 Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcccttcctc 290 |||||||||||||| || || || ||||||||||| || || ||||| ||||| || || Sbjct: 154 ggacagaagccactgacttttcctcgccaggtggttgctctatgccaagctccatttcta 213 Query: 291 ctcgatgatcccaacgtcggtctcatcttccccgccgatgccatcgcaagggccaagcac 350 | |||||||| || || || ||| | ||||| || ||||| || ||||| || || ||| Sbjct: 214 ttagatgatcctaatgtaggactcgtattcccagcagatgcaattgcaagagctaaacac 273 Query: 351 tacctctccctcgcacccggcggcttaggtgcgtacagtgactcccgaggtatccctggg 410 ||||| || | | | || || ||||||| || |||||||| |||||| | ||||| Sbjct: 274 tacctttcattgactacgggtggtctaggtgcttatagtgactctcgaggtcttcctgga 333 Query: 411 gtcaggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagag 470 | ||||||||||| || ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 334 ataaggaaggaagtggcagagttcattgggaggcgtgatgggtatccaagtgatccagag 393 Query: 471 cttatttacctcacagatggtgccagcaaaggtgtgatgcaaatgctcaacgccattatc 530 || || | ||||| ||||||||||||||||| || ||||| || | || | |||||| Sbjct: 394 ctcatatttctcacggatggtgccagcaaaggagtaatgcagattttgaatacaattatc 453 Query: 531 agaaacgagagggacgggattttggtccctgttccacaatacccgctttattctgctgcc 590 | || ||||| ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct: 454 cgtggtgaaagggatgggattttggttcctgtcccacaatatccgctttactcagctgca 513 Query: 591 atttccctctttggtggttctcttgtcccatattatttggaaga 634 || || |||| ||||||||||||||| ||||||||| ||||||| Sbjct: 514 atatctctctatggtggttctcttgttccatattatctggaaga 557
>gb|DQ226853.1| Boechera divaricarpa isolate SLW-C-D09 mRNA sequence Length = 646 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| ||||||||||| |||| || || || || ||||| || ||||| Sbjct: 407 ggcggtttaggtgcttacagtgactcaagaggcattccaggagttaggaaagaggttgct 466 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 467 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatatttctcactgat 526 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 527 ggagctagcaaaggtgtgatgcaaat 552
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 594 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 653 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 654 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 713 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 714 ggagctagcaaaggtgtgatgcaaat 739 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 456 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 508
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 628 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 687 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 688 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 747 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 748 ggagctagcaaaggtgtgatgcaaat 773 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 490 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 542
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 411 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 412 ggagctagcaaaggtgtgatgcaaat 437 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 154 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 206
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 416 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 475 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 476 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 535 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 536 ggagctagcaaaggtgtgatgcaaat 561 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 278 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 330
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 517 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 518 ggagctagcaaaggtgtgatgcaaat 543 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 260 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 312
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 382 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 441 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 442 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 501 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 502 ggagctagcaaaggtgtgatgcaaat 527 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 244 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 296
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 83.8 bits (42), Expect = 6e-13 Identities = 120/146 (82%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 439 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 498 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||||| ||||| || || | ||||| ||| Sbjct: 499 gagttcattcaacggcgtgatgggtatccaagtgacccagaactcatctttctcactgat 558 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 559 ggagctagcaaaggtgtgatgcaaat 584 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 301 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 353
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 81.8 bits (41), Expect = 3e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 414 aggaaggaagttgccgagttcattcagaggcgtgatgggtatccgagtgatccagagctt 473 ||||| || ||||| ||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 32 aggaaagaggttgctgagttcattcaacggcgtgatgggtatccaagtgacccagaactc 91 Query: 474 atttacctcacagatggtgccagcaaaggtgtgatgcaaat 514 || | ||||| ||||| || |||||||||||||||||||| Sbjct: 92 atctttctcactgatggagctagcaaaggtgtgatgcaaat 132
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 398 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 457 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||| | ||||| || || | ||||| ||| Sbjct: 458 gagttcattcaacggcgtgatgggtatccaagtaacccagaactcatctttctcactgat 517 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 518 ggagctagcaaaggtgtgatgcaaat 543 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 260 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 312
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 75.8 bits (38), Expect = 2e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 369 ggcggcttaggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgcc 428 ||||| |||||||| |||||||| || |||| | || || || ||||| || ||||| Sbjct: 292 ggcggtttaggtgcttacagtgattcaagaggccttccaggagttaggaaagaggttgct 351 Query: 429 gagttcattcagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagat 488 ||||||||||| |||||||||||||||| ||| | ||||| || || | ||||| ||| Sbjct: 352 gagttcattcaacggcgtgatgggtatccaagtaacccagaactcatctttctcactgat 411 Query: 489 ggtgccagcaaaggtgtgatgcaaat 514 || || |||||||||||||||||||| Sbjct: 412 ggagctagcaaaggtgtgatgcaaat 437 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 231 ggacagaagccactcaccttcccacgccaggtggtggcgctctgccaggctcc 283 |||||||||||| | || || || ||||||||||| ||||| ||||| ||||| Sbjct: 154 ggacagaagccattgacatttcctcgccaggtggttgcgctttgccaagctcc 206
>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.3 mRNA, complete cds Length = 1817 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 448 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 507 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 508 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 567 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 568 aaaggtgtgatgcaaat 584
>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.4 mRNA, complete cds Length = 1835 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 466 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 525 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 526 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 585 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 586 aaaggtgtgatgcaaat 602
>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.1 mRNA, complete cds Length = 1795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 426 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 485 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 486 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 545 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 546 aaaggtgtgatgcaaat 562
>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.2 mRNA, complete cds Length = 1851 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 482 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 541 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 542 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 601 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 602 aaaggtgtgatgcaaat 618
>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1477 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 301 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 360 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 361 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 420 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 421 aaaggtgtgatgcaaat 437
>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1773 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 426 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 485 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 486 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 545 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 546 aaaggtgtgatgcaaat 562
>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2) mRNA, complete cds Length = 1582 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 378 ggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttcatt 437 ||||| ||||||||||| ||||| | || || || |||| ||||| || ||||||||| Sbjct: 320 ggtgcttacagtgactcaagaggtcttccgggagttcggaaagaagtcgctgagttcatt 379 Query: 438 cagaggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagc 497 | |||||||||| ||||| || |||||||| || || | || || ||||| || ||| Sbjct: 380 gaacggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagc 439 Query: 498 aaaggtgtgatgcaaat 514 ||||||||||||||||| Sbjct: 440 aaaggtgtgatgcaaat 456
>gb|U31975.1|CRU31975 Chlamydomonas reinhardtii alanine aminotransferase mRNA, complete cds Length = 2534 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 180 aaggagggcaagaggatcatcttcaccaacgtcggcaacccgcacgc 226 |||||||||||| |||||| ||||| |||||||| ||||||||||| Sbjct: 313 aaggagggcaaggagatcattttcacaaacgtcggaaacccgcacgc 359
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 376 taggtgcgtacagtgactcccgaggtatccctggggtcaggaaggaagttgccgagttca 435 ||||||| || |||||||||||||| | || || || ||| ||||||| || ||||||| Sbjct: 35227 taggtgcttatagtgactcccgaggccttccaggagtgaggcaggaagtggcagagttca 35168 Query: 436 ttcagaggcgtgatgggtatcc 457 | || ||||||||||| ||||| Sbjct: 35167 tacaaaggcgtgatggttatcc 35146 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 459 agtgatccagagcttatttacctcacagatggtgccagcaaaggtgtgatgca 511 |||||||||||||| || || || || |||||||||||||| | ||||||||| Sbjct: 35022 agtgatccagagctcatatatcttactgatggtgccagcaaggctgtgatgca 34970
>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence Length = 1782 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 442 ggcgtgatgggtatccgagtgatccagagcttatttacctcacagatggtgccagcaaag 501 |||||||||| ||||| || |||||||| || || | || || ||||| || ||||||| Sbjct: 490 ggcgtgatggatatccaagcgatccagaactcatatttctaactgatggagcgagcaaag 549 Query: 502 gtgtgatgcaaat 514 ||||||||||||| Sbjct: 550 gtgtgatgcaaat 562
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 414 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 457 ||||| || ||||| ||||||||||| |||||||||||||||| Sbjct: 46944 aggaaagaggttgctgagttcattcaacggcgtgatgggtatcc 46901 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 480 ctcacagatggtgccagcaaaggtgtgatgcaaat 514 ||||| ||||| || |||||||||||||||||||| Sbjct: 46795 ctcactgatggagctagcaaaggtgtgatgcaaat 46761
>ref|XM_587589.2| PREDICTED: Bos taurus similar to kyphoscoliosis peptidase (LOC510448), partial mRNA Length = 766 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 21 ctctgctctgcggcggcgcgccaggg 46 |||||| ||||||||||||||||||| Sbjct: 307 ctctgcgctgcggcggcgcgccaggg 282
>ref|XM_515293.1| PREDICTED: Pan troglodytes a disintegrin and metalloproteinase domain 17 (LOC459018), mRNA Length = 2565 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 tctgccaggctcccttcctcc 291 ||||||||||||||||||||| Sbjct: 1833 tctgccaggctcccttcctcc 1853
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 486 gatggtgccagcaaaggtgtgatgcaaat 514 ||||| || |||||||||||||||||||| Sbjct: 63896 gatggagcgagcaaaggtgtgatgcaaat 63924
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 486 gatggtgccagcaaaggtgtgatgcaaat 514 ||||| || |||||||||||||||||||| Sbjct: 90606 gatggagcgagcaaaggtgtgatgcaaat 90578
>gb|AC080162.7| Homo sapiens BAC clone RP11-400L8 from 2, complete sequence Length = 171653 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tctgccaggctcccttcctcc 291 ||||||||||||||||||||| Sbjct: 144125 tctgccaggctcccttcctcc 144105
>emb|AM260496.1| Platanus acerifolia partial mRNA for alanine aminotransferase (at gene) Length = 568 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 602 tggtggttctcttgtcccatattatttggaaga 634 ||||||||||||||| ||||||| | ||||||| Sbjct: 40 tggtggttctcttgttccatattttctggaaga 72
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 caacgtcggcaacccgcacgccctc 230 ||||| ||||||||||||||||||| Sbjct: 788135 caacgacggcaacccgcacgccctc 788159
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 575 gctttattctgctgccattt 594 |||||||||||||||||||| Sbjct: 130335 gctttattctgctgccattt 130354
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 617 cccatattatttggaagaag 636 |||||||||||||||||||| Sbjct: 91227 cccatattatttggaagaag 91208
>ref|XM_775420.1| PREDICTED: Strongylocentrotus purpuratus similar to PRP3 pre-mRNA processing factor 3 homolog (LOC575001), mRNA Length = 1716 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 596 cctctttggtggttctcttg 615 |||||||||||||||||||| Sbjct: 112 cctctttggtggttctcttg 93
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 791217 ttccacaatacccgctttat 791236
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gccgatgccatcgcaagggc 343 |||||||||||||||||||| Sbjct: 292803 gccgatgccatcgcaagggc 292784
>emb|BX571691.13| Zebrafish DNA sequence from clone CH211-142G20 in linkage group 7, complete sequence Length = 79440 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggagggcaagaggatcatct 201 |||||||||||||||||||| Sbjct: 736 ggagggcaagaggatcatct 717
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 40.1 bits (20), Expect = 8.7 Identities = 38/44 (86%) Strand = Plus / Minus Query: 414 aggaaggaagttgccgagttcattcagaggcgtgatgggtatcc 457 ||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct: 80405 aggaaagaagtggcagagtttatacagaggcgtgatggttatcc 80362
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 821262 ttccacaatacccgctttat 821281
>gb|AC078935.5| Staphylococcus aureus clone sabac-7, complete sequence Length = 53354 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 20568 ttccacaatacccgctttat 20587
>ref|XM_681871.1| PREDICTED: Danio rerio similar to Nedd4-binding protein 1 (N4BP1) (LOC558641), partial mRNA Length = 458 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggagggcaagaggatcatct 201 |||||||||||||||||||| Sbjct: 216 ggagggcaagaggatcatct 235
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 829669 ttccacaatacccgctttat 829688
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 741076 ttccacaatacccgctttat 741095
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 808068 ttccacaatacccgctttat 808087
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 gattttggtccctgttccacaata 571 ||||||||||||||||| |||||| Sbjct: 14752462 gattttggtccctgttctacaata 14752439
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 gattttggtccctgttccacaata 571 ||||||||||||||||| |||||| Sbjct: 6400 gattttggtccctgttctacaata 6377
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 792789 ttccacaatacccgctttat 792808
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 797069 ttccacaatacccgctttat 797088
>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200061 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 agagcttatttacctcacag 486 |||||||||||||||||||| Sbjct: 106374 agagcttatttacctcacag 106355
>emb|AJ299420.1|CRU299420 Capsella rubella ORF1 and ORF2 DNA for hypothetical proteins Length = 5138 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 cttccccgccgatgccatcg 336 |||||||||||||||||||| Sbjct: 434 cttccccgccgatgccatcg 453
>emb|AJ328439.1|HSA328439 Homo sapiens genomic sequence surrounding NotI site, clone HSJ4-AD9RS Length = 715 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 cggcggcttaggtgcgtaca 387 |||||||||||||||||||| Sbjct: 11 cggcggcttaggtgcgtaca 30
>gb|AY106411.1| Zea mays PCO106344 mRNA sequence Length = 1217 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 ctctgctctgctctgcggcg 35 |||||||||||||||||||| Sbjct: 66 ctctgctctgctctgcggcg 47
>emb|AL136501.4|CNS01DW8 Human chromosome 14 DNA sequence BAC R-804L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180583 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tctgctgccatttccctctt 601 |||||||||||||||||||| Sbjct: 46821 tctgctgccatttccctctt 46840
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 835458 ttccacaatacccgctttat 835477
>gb|AC005757.1|AC005757 Homo sapiens chromosome 19, cosmid R32611, complete sequence Length = 45929 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 ccaggctcccttcctcctcgatga 298 ||||||||||||||||||| |||| Sbjct: 30098 ccaggctcccttcctcctccatga 30121
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 548 gattttggtccctgttccacaata 571 ||||||||||||||||| |||||| Sbjct: 92116 gattttggtccctgttctacaata 92093
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttccacaatacccgctttat 581 |||||||||||||||||||| Sbjct: 762048 ttccacaatacccgctttat 762067 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,643,490 Number of Sequences: 3902068 Number of extensions: 4643490 Number of successful extensions: 90755 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90447 Number of HSP's gapped (non-prelim): 302 length of query: 636 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 613 effective length of database: 17,143,297,704 effective search space: 10508841492552 effective search space used: 10508841492552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
