| Clone Name | basd16j15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1176 bits (593), Expect = 0.0 Identities = 614/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 119779 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119720 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119719 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119660 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119659 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119600 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119599 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119540 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119539 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119480 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119479 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 119420 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119419 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 119360 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119359 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 119300 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119299 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 119240 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119239 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 119180 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 119179 cggtgcgggctgcgcgagc 119161 Score = 1176 bits (593), Expect = 0.0 Identities = 614/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95115 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95174 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95175 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95234 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95235 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95294 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95295 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95354 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95355 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95414 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95415 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 95474 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95475 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 95534 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95535 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 95594 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95595 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 95654 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95655 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 95714 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 95715 cggtgcgggctgcgcgagc 95733
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 118560 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 118501 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 118500 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 118441 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118440 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 118381 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118380 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 118321 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118320 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 118261 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118260 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 118201 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118200 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 118141 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118140 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 118081 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118080 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 118021 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118020 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 117961 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 117960 cggtgcgggctgcgcgagc 117942
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 119644 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119585 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119584 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119525 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119524 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119465 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119405 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119345 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119344 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 119285 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119284 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 119225 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119224 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 119165 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119164 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 119105 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119104 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 119045 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 119044 cggtgcgggctgcgcgagc 119026 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95512 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95571 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95631 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95691 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95751 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95811 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95812 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 95871 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95872 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 95931 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95932 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 95991 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95992 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 96051 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96052 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 96111 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 96112 cggtgcgggctgcgcgagc 96130
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 119644 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119585 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119584 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119525 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119524 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119465 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119405 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119345 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119344 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 119285 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119284 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 119225 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119224 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 119165 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119164 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 119105 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119104 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 119045 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 119044 cggtgcgggctgcgcgagc 119026 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95512 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95571 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95631 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95691 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95751 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95811 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95812 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 95871 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95872 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 95931 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95932 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 95991 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95992 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 96051 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96052 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 96111 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 96112 cggtgcgggctgcgcgagc 96130
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 119593 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119534 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119533 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119474 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119414 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119413 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119354 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119353 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119294 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119293 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 119234 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119233 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 119174 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119173 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 119114 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119113 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 119054 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119053 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 118994 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 118993 cggtgcgggctgcgcgagc 118975 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95457 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95516 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95517 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95576 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95577 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95636 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95637 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95696 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95697 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95756 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95757 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 95816 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95817 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 95876 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95877 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 95936 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95937 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 95996 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95997 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 96056 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 96057 cggtgcgggctgcgcgagc 96075
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 31508090 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 31508149 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31508150 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 31508209 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508210 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 31508269 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508270 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 31508329 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508330 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 31508389 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508390 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 31508449 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508450 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 31508509 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508510 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 31508569 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508570 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 31508629 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508630 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 31508689 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 31508690 cggtgcgggctgcgcgagc 31508708
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 84506 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 84447 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 84446 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 84387 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84386 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 84327 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84326 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 84267 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84266 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 84207 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84206 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 84147 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84146 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 84087 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84086 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 84027 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84026 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 83967 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83966 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 83907 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 83906 cggtgcgggctgcgcgagc 83888
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 119613 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119554 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119553 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119494 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119493 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119434 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119433 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119374 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119373 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119314 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119313 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 119254 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119253 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 119194 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119193 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 119134 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119133 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 119074 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119073 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 119014 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 119013 cggtgcgggctgcgcgagc 118995 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95505 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95564 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95565 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95624 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95684 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95744 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95804 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95805 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 95864 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95865 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 95924 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95925 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 95984 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95985 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 96044 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96045 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 96104 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 96105 cggtgcgggctgcgcgagc 96123
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 58332 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 58273 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 58272 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 58213 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58212 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 58153 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58152 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 58093 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58092 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 58033 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58032 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 57973 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57972 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 57913 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57912 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 57853 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57852 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 57793 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57792 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 57733 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 57732 cggtgcgggctgcgcgagc 57714
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 9268439 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9268498 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9268499 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9268558 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268559 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9268618 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268619 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9268678 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268679 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9268738 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268739 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 9268798 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268799 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 9268858 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268859 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 9268918 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268919 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 9268978 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268979 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 9269038 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 9269039 cggtgcgggctgcgcgagc 9269057 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 9227939 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9227998 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9227999 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9228058 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228059 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9228118 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228119 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9228178 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228179 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9228238 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228239 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 9228298 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 9228299 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctaggtgatctatc 9228358 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228359 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 9228418 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228419 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 9228478 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228479 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 9228538 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 9228539 cggtgcgggctgcgcgagc 9228557 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 9056353 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9056412 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 9056413 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgt 9056472 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056473 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9056532 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056533 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9056592 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056593 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9056652 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056653 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 9056712 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056713 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 9056772 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056773 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 9056832 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056833 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 9056892 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056893 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 9056952 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 9056953 cggtgcgggctgcgcgagc 9056971 Score = 1144 bits (577), Expect = 0.0 Identities = 611/619 (98%), Gaps = 3/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 9164528 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9164587 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9164588 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9164647 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164648 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9164707 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164708 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9164767 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164768 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9164827 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164828 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 9164887 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 9164888 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatc 9164946 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164947 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 9165006 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165007 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 9165066 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165067 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 9165126 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 9165127 cggtgcgggctgcgcgagc 9165145 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 165 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 224 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 225 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 271 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 19938424 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 19938483 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19938484 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 19938543 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938544 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 19938603 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938604 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 19938663 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938664 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 19938723 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938724 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 19938783 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938784 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 19938843 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938844 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 19938903 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938904 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 19938963 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938964 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 19939023 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 19939024 cggtgcgggctgcgcgagc 19939042 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 10277007 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10276948 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10276947 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10276888 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276887 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10276828 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276827 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10276768 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276767 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10276708 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276707 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 10276648 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276647 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 10276588 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276587 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 10276528 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276527 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 10276468 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276467 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 10276408 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 10276407 cggtgcgggctgcgcgagc 10276389 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 10387291 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10387350 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10387351 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10387410 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387411 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10387470 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387471 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10387530 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387531 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10387590 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387591 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 10387650 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387651 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 10387710 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387711 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 10387770 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387771 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 10387830 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387831 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 10387890 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 10387891 cggtgcgggctgcgcgagc 10387909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 183 agtaccgtgagggaaaggtgaaaagaacccc 213 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 31598606 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 31598665 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31598666 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 31598725 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598726 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 31598785 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598786 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 31598845 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598846 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 31598905 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598906 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 31598965 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598966 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 31599025 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599026 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 31599085 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599086 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 31599145 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599146 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 31599205 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 31599206 cggtgcgggctgcgcgagc 31599224
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 33525922 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 33525981 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 33525982 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 33526041 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526042 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 33526101 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526102 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 33526161 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526162 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 33526221 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526222 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 33526281 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526282 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 33526341 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526342 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 33526401 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526402 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 33526461 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526462 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 33526521 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 33526522 cggtgcgggctgcgcgagc 33526540 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 187 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 246 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 247 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 306 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 307 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 201 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 260 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 261 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 310 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 194 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 47619 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 47560 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 47559 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 47500 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47499 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 47440 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47439 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 47380 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47379 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 47320 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47319 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 47260 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47259 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 47200 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47199 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 47140 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47139 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 47080 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47079 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 47020 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 47019 cggtgcgggctgcgcgagc 47001
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 71119 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 71178 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 71179 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 71238 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71239 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 71298 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71299 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 71358 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71359 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 71418 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71419 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 71478 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71479 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 71538 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71539 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 71598 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71599 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 71658 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71659 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 71718 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 71719 cggtgcgggctgcgcgagc 71737 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 83 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 142 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 143 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 202 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 262 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 322 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 382 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 442 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 502 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 562 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 622 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 682 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 683 cggtgcgggctgcgcgagc 701
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 291 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 350 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 351 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 410 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 470 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 530 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 590 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 650 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 710 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 770 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 830 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 890 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 891 cggtgcgggctgcgcgagc 909
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 86 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 145 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 205 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 265 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 325 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 385 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 445 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 505 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 565 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 625 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 685 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 686 cggtgcgggctgcgcgagc 704
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 198 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 257 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 258 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 317 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 377 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 437 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 497 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 557 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 617 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 677 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 737 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 797 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 798 cggtgcgggctgcgcgagc 816
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 88 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 147 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 148 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 207 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 267 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 327 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 387 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 447 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 507 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 567 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 627 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 687 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 688 cggtgcgggctgcgcgagc 706
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 86 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 145 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 205 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 265 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 325 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 385 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 445 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 505 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 565 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 625 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 685 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 686 cggtgcgggctgcgcgagc 704
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 88 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 147 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 148 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 207 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 267 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 327 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 387 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 447 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 507 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 508 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 567 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 627 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 628 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 687 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 688 cggtgcgggctgcgcgagc 706
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 19949700 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 19949759 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19949760 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 19949819 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949820 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 19949879 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949880 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 19949939 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949940 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 19949999 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950000 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 19950059 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950060 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 19950119 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950120 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 19950179 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950180 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 19950239 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950240 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 19950299 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 19950300 cggtgcgggctgcgcgagc 19950318 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 10283046 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10282987 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10282986 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10282927 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282926 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10282867 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282866 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10282807 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282806 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10282747 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282746 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 10282687 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282686 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 10282627 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282626 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 10282567 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282566 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 10282507 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282506 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 10282447 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 10282446 cggtgcgggctgcgcgagc 10282428 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 10393330 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10393389 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10393390 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10393449 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393450 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10393509 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393510 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10393569 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393570 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10393629 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393630 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 10393689 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393690 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 10393749 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393750 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 10393809 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393810 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 10393869 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393870 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 10393929 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 10393930 cggtgcgggctgcgcgagc 10393948 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 119587 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119528 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119527 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119468 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119467 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119408 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119407 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119348 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119347 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119288 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119287 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 119228 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119227 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 119168 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119167 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 119108 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119107 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 119048 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119047 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 118988 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 118987 cggtgcgggctgcgcgagc 118969 Score = 1168 bits (589), Expect = 0.0 Identities = 613/619 (99%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95452 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95511 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95512 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95571 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95631 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95691 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95751 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 95811 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95812 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 95871 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95872 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 95931 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95932 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 95991 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95992 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 96051 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 96052 cggtgcgggctgcgcgagc 96070
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 690 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 631 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 630 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 571 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 511 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 451 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 391 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 390 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 331 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 271 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 211 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 151 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 91 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 90 cggtgcgggctgcgcgagc 72
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 14279 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 14338 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 14339 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgt 14398 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14399 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 14458 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14459 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 14518 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14519 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 14578 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14579 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 14638 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14639 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 14698 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14699 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 14758 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14759 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 14818 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14819 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 14878 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 14879 cggtgcgggctgcgcgagc 14897 Score = 1144 bits (577), Expect = 0.0 Identities = 611/619 (98%), Gaps = 3/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 122554 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 122613 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122614 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 122673 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122674 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 122733 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122734 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 122793 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 122853 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 122913 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 122914 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-ctaggtgatctatc 122972 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122973 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 123032 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123033 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 123092 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123093 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 123152 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 123153 cggtgcgggctgcgcgagc 123171
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 141087 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 141146 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 141147 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgt 141206 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141207 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 141266 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141267 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 141326 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141327 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 141386 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141387 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 141446 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141447 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 141506 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141507 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 141566 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141567 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 141626 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141627 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 141686 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 141687 cggtgcgggctgcgcgagc 141705
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 93683 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 93742 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 93743 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 93802 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93803 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 93862 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 93863 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 93922 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93923 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 93982 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93983 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 94042 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94043 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 94102 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94103 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 94162 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94163 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 94222 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94223 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 94282 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 94283 cggtgcgggctgcgcgagc 94301
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 20514 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 20573 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 20574 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 20633 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20634 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 20693 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20694 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 20753 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20754 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 20813 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 20814 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 20873 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20874 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 20933 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20934 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 20993 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20994 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 21053 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21054 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 21113 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 21114 cggtgcgggctgcgcgagc 21132 Score = 1122 bits (566), Expect = 0.0 Identities = 609/620 (98%), Gaps = 3/620 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 44604 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 44545 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 44544 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 44485 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44484 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 44425 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44424 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 44365 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44364 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 44305 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | Sbjct: 44304 agccggcgactcataggcagtggcttggttaagggaatggaaccctccggagccgtagtg 44245 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44244 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 44185 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44184 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 44125 Query: 486 aatcagcggatgagttgtggttaggggtg-aaatgccactcgaacccagagctagctggt 544 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 44124 aatcagcggatgagttgtggttaggggtgtaaatgccactcgaacccagagctagttggt 44065 Query: 545 tctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtt 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44064 tctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtt 44005 Query: 605 tcggtgcgggctgcgcgagc 624 |||||||||||||||||||| Sbjct: 44004 tcggtgcgggctgcgcgagc 43985
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 1233 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 1174 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 1114 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 1054 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 994 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 934 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 933 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 874 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 814 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 754 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 694 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 634 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 633 cggtgcgggctgcgcgagc 615
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 27747 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 27806 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27807 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 27866 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27867 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 27926 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27927 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 27986 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27987 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 28046 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28047 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 28106 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28107 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 28166 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28167 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 28226 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28227 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 28286 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28287 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 28346 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 28347 cggtgcgggctgcgcgagc 28365
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 123443 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 123384 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123383 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 123324 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123323 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 123264 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123263 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 123204 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123203 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 123144 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123143 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 123084 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123083 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 123024 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123023 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 122964 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122963 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 122904 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122903 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 122844 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 122843 cggtgcgggctgcgcgagc 122825 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 99394 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 99453 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99454 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 99513 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99514 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 99573 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99574 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 99633 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99634 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 99693 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99694 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 99753 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99754 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 99813 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99814 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 99873 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99874 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 99933 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99934 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 99993 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 99994 cggtgcgggctgcgcgagc 100012
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 85 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 144 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 145 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 204 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 264 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 324 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 384 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 444 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 504 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 505 catgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaag 564 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 624 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 684 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 685 cggtgcgggctgcgcgagc 703
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 124160 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 124101 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 124100 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 124041 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124040 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 123981 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123980 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 123921 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123920 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 123861 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123860 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 123801 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123800 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 123741 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123740 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 123681 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123680 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 123621 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123620 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 123561 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 123560 cggtgcgggctgcgcgagc 123542 Score = 1160 bits (585), Expect = 0.0 Identities = 612/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 100071 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 100130 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 100131 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 100190 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100191 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 100250 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100251 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 100310 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100311 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 100370 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100371 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 100430 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100431 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 100490 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100491 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 100550 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100551 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 100610 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100611 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 100670 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 100671 cggtgcgggctgcgcgagc 100689
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1152 bits (581), Expect = 0.0 Identities = 611/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 9241842 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9241783 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9241782 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9241723 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241722 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9241663 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241662 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9241603 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241602 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9241543 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241542 agctggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 9241483 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241482 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 9241423 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241422 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaag 9241363 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241362 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 9241303 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241302 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 9241243 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 9241242 cggtgcgggctgcgcgagc 9241224
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1152 bits (581), Expect = 0.0 Identities = 611/619 (98%), Gaps = 2/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 53055 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 52996 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 52995 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 52936 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52935 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 52876 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52875 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 52816 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52815 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 52756 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52755 agctggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 52696 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52695 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 52636 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52635 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaag 52576 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52575 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 52516 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52515 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 52456 Query: 606 cggtgcgggctgcgcgagc 624 ||||||||||||||||||| Sbjct: 52455 cggtgcgggctgcgcgagc 52437
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1124 bits (567), Expect = 0.0 Identities = 573/575 (99%) Strand = Plus / Plus Query: 50 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 109 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 110 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 170 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 230 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 290 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 350 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 409 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 410 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 420 Query: 470 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 480 Query: 530 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag 540 Query: 590 gggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||| Sbjct: 541 gggtaaagcactgtttcggtgcgggctgcgcgagc 575
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1112 bits (561), Expect = 0.0 Identities = 608/619 (98%), Gaps = 4/619 (0%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 123382 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagc 123323 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123322 cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 123264 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123263 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 123204 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123203 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 123144 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123143 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 123084 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123083 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 123024 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123023 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 122964 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122963 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 122904 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122903 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 122844 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122843 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 122784 Query: 606 cggtgcgggctgcgcgagc 624 |||||| |||||||||||| Sbjct: 122783 cggtgc-ggctgcgcgagc 122766 Score = 1112 bits (561), Expect = 0.0 Identities = 608/619 (98%), Gaps = 4/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 99355 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagc 99414 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99415 cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 99473 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99474 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 99533 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99534 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 99593 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99594 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 99653 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99654 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 99713 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99714 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 99773 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99774 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 99833 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99834 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 99893 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99894 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 99953 Query: 606 cggtgcgggctgcgcgagc 624 |||||| |||||||||||| Sbjct: 99954 cggtgc-ggctgcgcgagc 99971
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1112 bits (561), Expect = 0.0 Identities = 608/619 (98%), Gaps = 4/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 5708 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagc 5767 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5768 cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 5826 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5827 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 5886 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5887 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 5946 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5947 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 6006 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 6007 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 6066 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6067 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 6126 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6127 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 6186 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6187 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 6246 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6247 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 6306 Query: 606 cggtgcgggctgcgcgagc 624 |||||| |||||||||||| Sbjct: 6307 cggtgc-ggctgcgcgagc 6324
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1112 bits (561), Expect = 0.0 Identities = 608/619 (98%), Gaps = 4/619 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 296 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagc 355 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 356 cgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 414 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 474 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 534 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 594 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 595 agccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccgtagcg 654 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 714 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 774 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 834 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 894 Query: 606 cggtgcgggctgcgcgagc 624 |||||| |||||||||||| Sbjct: 895 cggtgc-ggctgcgcgagc 912
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1025 bits (517), Expect = 0.0 Identities = 523/525 (99%) Strand = Plus / Plus Query: 100 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 160 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 220 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 279 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 340 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 399 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 400 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 360 Query: 460 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 420 Query: 520 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 480 Query: 580 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 525
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1001 bits (505), Expect = 0.0 Identities = 508/509 (99%) Strand = Plus / Plus Query: 116 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 176 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 236 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 296 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 356 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 415 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 416 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 360 Query: 476 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 420 Query: 536 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 480 Query: 596 agcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||| Sbjct: 481 agcactgtttcggtgcgggctgcgcgagc 509
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 977 bits (493), Expect = 0.0 Identities = 511/516 (99%), Gaps = 2/516 (0%) Strand = Plus / Minus Query: 111 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 171 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 231 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 291 gcctgttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaac 348 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 349 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 408 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 409 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 122461 Query: 469 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122460 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 122401 Query: 529 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122400 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 122341 Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||||||||||||| Sbjct: 122340 ggggtaaagcactgtttcggtgcgggctgcgcgagc 122305 Score = 167 bits (84), Expect = 5e-38 Identities = 108/114 (94%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 123177 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 123118 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 119 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123117 cgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 977 bits (493), Expect = 0.0 Identities = 511/516 (99%), Gaps = 2/516 (0%) Strand = Plus / Minus Query: 111 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 171 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 231 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 291 gcctgttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaac 348 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 349 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 408 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 409 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 12825002 Query: 469 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825001 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 12824942 Query: 529 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824941 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 12824882 Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||||||||||||| Sbjct: 12824881 ggggtaaagcactgtttcggtgcgggctgcgcgagc 12824846 Score = 167 bits (84), Expect = 5e-38 Identities = 108/114 (94%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 12825718 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 12825659 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 119 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825658 cgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 56 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 115 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 948 bits (478), Expect = 0.0 Identities = 582/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Minus Query: 13 tgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaaa 70 |||||||||||||| |||| |||||| |||||||| ||| | |||||||||||||||| Sbjct: 127567 tgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaa 127508 Query: 71 gcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 130 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127507 acatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 127448 Query: 131 agcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgt 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127447 agcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgt 127388 Query: 191 gagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgag 250 ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| || Sbjct: 127387 gagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---ag 127331 Query: 251 ctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 310 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 127330 ctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccg 127271 Query: 311 gcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagc 370 |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 127270 gcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagc 127216 Query: 371 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 430 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127215 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 127156 Query: 431 ccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 490 |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 127155 ccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 127096 Query: 491 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127095 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 127036 Query: 551 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127035 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 126976 Query: 611 cgggctgcgcgagc 624 ||||| ||| |||| Sbjct: 126975 cgggccgcgagagc 126962 Score = 948 bits (478), Expect = 0.0 Identities = 582/614 (94%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 13 tgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaaa 70 |||||||||||||| |||| |||||| |||||||| ||| | |||||||||||||||| Sbjct: 107355 tgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaa 107414 Query: 71 gcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 130 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 acatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 107474 Query: 131 agcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgt 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107475 agcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgt 107534 Query: 191 gagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgag 250 ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| || Sbjct: 107535 gagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---ag 107591 Query: 251 ctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 310 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107592 ctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccg 107651 Query: 311 gcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagc 370 |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 107652 gcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagc 107706 Query: 371 gagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 430 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107707 gagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatga 107766 Query: 431 ccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatca 490 |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 107767 ccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatca 107826 Query: 491 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107827 gcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccc 107886 Query: 551 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107887 cgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtg 107946 Query: 611 cgggctgcgcgagc 624 ||||| ||| |||| Sbjct: 107947 cgggccgcgagagc 107960
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 944 bits (476), Expect = 0.0 Identities = 547/570 (95%), Gaps = 8/570 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133882 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 133823 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133822 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 133763 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 133762 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 133703 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 133702 atgaaaccgta---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcct 133646 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133645 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 133591 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133590 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 133531 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 133530 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 133471 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133470 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 133411 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133410 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 133351 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 133350 aagcactgtttcggtgcgggccgcgagagc 133321 Score = 944 bits (476), Expect = 0.0 Identities = 547/570 (95%), Gaps = 8/570 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104089 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 104148 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104149 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 104208 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 104209 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 104268 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 104269 atgaaaccgta---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcct 104325 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 104326 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 104380 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104381 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 104440 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 104441 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 104500 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104501 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 104560 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104561 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggta 104620 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 104621 aagcactgtttcggtgcgggccgcgagagc 104650
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 940 bits (474), Expect = 0.0 Identities = 537/557 (96%), Gaps = 15/557 (2%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 75408 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 75349 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 75348 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 75289 Query: 126 gaatcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75288 gaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 75229 Query: 181 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75228 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 75169 Query: 241 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75168 ccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaa 75117 Query: 301 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75116 gaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccg 75057 Query: 361 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 75056 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 74997 Query: 421 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74996 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 74937 Query: 481 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74936 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 74877 Query: 541 tggttctccccgaaatg 557 ||||||||||||||||| Sbjct: 74876 tggttctccccgaaatg 74860 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 940 bits (474), Expect = 0.0 Identities = 537/557 (96%), Gaps = 15/557 (2%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 382130 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 382189 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 382190 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 382249 Query: 126 gaatcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382250 gaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 382309 Query: 181 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382310 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 382369 Query: 241 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382370 ccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaa 382421 Query: 301 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 382422 gaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccg 382481 Query: 361 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382482 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 382541 Query: 421 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382542 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 382601 Query: 481 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382602 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 382661 Query: 541 tggttctccccgaaatg 557 ||||||||||||||||| Sbjct: 382662 tggttctccccgaaatg 382678 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 940 bits (474), Expect = 0.0 Identities = 537/557 (96%), Gaps = 15/557 (2%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 113499 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 113440 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 113439 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 113380 Query: 126 gaatcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 113379 gaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 113320 Query: 181 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113319 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 113260 Query: 241 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113259 ccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaa 113208 Query: 301 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113207 gaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccg 113148 Query: 361 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 113147 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 113088 Query: 421 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113087 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 113028 Query: 481 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113027 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 112968 Query: 541 tggttctccccgaaatg 557 ||||||||||||||||| Sbjct: 112967 tggttctccccgaaatg 112951 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 940 bits (474), Expect = 0.0 Identities = 540/561 (96%), Gaps = 15/561 (2%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 368181 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 368122 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 368121 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 368062 Query: 126 gaatcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 368061 gaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 368002 Query: 181 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368001 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 367942 Query: 241 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 367941 ccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaa 367890 Query: 301 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 367889 gaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccg 367830 Query: 361 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 367829 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 367770 Query: 421 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367769 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 367710 Query: 481 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367709 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 367650 Query: 541 tggttctccccgaaatgcgtt 561 |||||||||||||||| |||| Sbjct: 367649 tggttctccccgaaattcgtt 367629 Score = 940 bits (474), Expect = 0.0 Identities = 540/561 (96%), Gaps = 15/561 (2%) Strand = Plus / Minus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 184786 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 184727 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 184726 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 184667 Query: 126 gaatcagcaagga-----ccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 184666 gaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 184607 Query: 181 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184606 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 184547 Query: 241 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184546 ccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcctgttgaa 184495 Query: 301 gaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccg 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 184494 gaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccggagccg 184435 Query: 361 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 184434 tagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgat 184375 Query: 421 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184374 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 184315 Query: 481 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184314 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 184255 Query: 541 tggttctccccgaaatgcgtt 561 |||||||||||||||| |||| Sbjct: 184254 tggttctccccgaaattcgtt 184234 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 934 bits (471), Expect = 0.0 Identities = 581/615 (94%), Gaps = 10/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||| | |||||||| ||| | ||||||||||||||| Sbjct: 139290 gtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaa 139231 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139230 agcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 139171 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139170 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 139111 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 139110 tgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---a 139054 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 139053 gctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagcc 138994 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 138993 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaag 138939 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138938 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 138879 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 138878 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 138819 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138818 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 138759 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138758 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138699 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 138698 gcgggccgcgagagc 138684 Score = 934 bits (471), Expect = 0.0 Identities = 581/615 (94%), Gaps = 10/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||| | |||||||| ||| | ||||||||||||||| Sbjct: 110655 gtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaa 110714 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110715 agcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 110774 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110775 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 110834 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 110835 tgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---a 110891 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 110892 gctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagcc 110951 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 110952 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaag 111006 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111007 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 111066 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 111067 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 111126 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111127 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 111186 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111187 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 111246 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 111247 gcgggccgcgagagc 111261
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 934 bits (471), Expect = 0.0 Identities = 581/615 (94%), Gaps = 10/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| ||||||||| | |||||||| ||| | ||||||||| ||||| Sbjct: 141812 gtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaa 141753 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141752 agcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 141693 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141692 cagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 141633 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 141632 tgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---a 141576 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 141575 gctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagcc 141516 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141515 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 141461 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141460 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 141401 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 141400 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 141341 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141340 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 141281 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141280 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141221 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 141220 gcgggccgcgagagc 141206 Score = 934 bits (471), Expect = 0.0 Identities = 581/615 (94%), Gaps = 10/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| ||||||||| | |||||||| ||| | ||||||||| ||||| Sbjct: 111845 gtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaa 111904 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111905 agcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 111964 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111965 cagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 112024 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 112025 tgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---a 112081 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 112082 gctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagcc 112141 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 112142 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 112196 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112197 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 112256 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 112257 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 112316 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112317 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 112376 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112377 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 112436 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 112437 gcgggccgcgagagc 112451
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 924 bits (466), Expect = 0.0 Identities = 580/615 (94%), Gaps = 14/615 (2%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || |||||| |||||||| ||||| ||||||||||||||| Sbjct: 134685 gtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaa 134626 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134625 agcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaat 134566 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134565 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 134506 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 134505 tgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---a 134449 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 134448 gctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagcc 134393 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134392 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 134338 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134337 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 134278 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 134277 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 134218 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134217 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 134158 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134157 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134098 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 134097 gcgggccgcgagagc 134083 Score = 924 bits (466), Expect = 0.0 Identities = 580/615 (94%), Gaps = 14/615 (2%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || |||||| |||||||| ||||| ||||||||||||||| Sbjct: 105597 gtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaa 105656 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105657 agcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaat 105716 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105717 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 105776 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| | Sbjct: 105777 tgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg---a 105833 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 105834 gctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagcc 105889 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105890 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 105944 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105945 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 106004 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106005 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106064 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106065 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106124 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106125 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106184 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 106185 gcgggccgcgagagc 106199
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 912 bits (460), Expect = 0.0 Identities = 579/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 136295 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 136236 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136235 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 136176 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136175 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 136116 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 136115 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 136059 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| Sbjct: 136058 gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagcc 136001 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136000 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 135946 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135945 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 135886 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 135885 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 135826 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135825 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 135766 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135765 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135706 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 135705 gcgggccgcgagagc 135691 Score = 912 bits (460), Expect = 0.0 Identities = 579/615 (94%), Gaps = 12/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 106130 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 106189 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106190 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 106249 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106250 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 106309 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 106310 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 106366 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| Sbjct: 106367 gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagcc 106424 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106425 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 106479 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 106539 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 106540 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 106599 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106600 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 106659 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106660 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106719 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 106720 gcgggccgcgagagc 106734
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135960 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 135901 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135900 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135841 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135840 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135781 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135780 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 135726 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135725 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 135671 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135670 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135611 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135610 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135551 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135550 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135491 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135490 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135431 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 135430 taaagcactgtttcggtgcgggccgcgagagc 135399 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 106729 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106730 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 106789 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 106790 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106849 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106850 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106904 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106905 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106959 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106960 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 107019 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 107020 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 107079 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107080 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107139 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107140 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107199 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 107200 taaagcactgtttcggtgcgggccgcgagagc 107231
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1864 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 1923 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1924 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 1983 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 1984 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 2043 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 2044 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 2098 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2099 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 2153 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2154 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 2213 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 2214 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 2273 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2274 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 2333 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2334 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 2393 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 2394 taaagcactgtttcggtgcgggccgcgagagc 2425
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135958 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 135899 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135898 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135839 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135838 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135779 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135778 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 135724 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135723 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 135669 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135668 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135609 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135608 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135549 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135548 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135489 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135488 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135429 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 135428 taaagcactgtttcggtgcgggccgcgagagc 135397 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106668 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 106727 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106728 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 106787 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 106788 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106847 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106848 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106902 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106903 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106957 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106958 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 107017 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 107018 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 107077 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107078 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107137 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107138 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107197 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 107198 taaagcactgtttcggtgcgggccgcgagagc 107229
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135689 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 135630 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135629 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135570 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135569 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135510 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135509 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 135455 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135454 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 135400 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135399 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 135340 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135339 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135280 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135279 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135220 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135219 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135160 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 135159 taaagcactgtttcggtgcgggccgcgagagc 135128 Score = 910 bits (459), Expect = 0.0 Identities = 545/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106449 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 106508 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106509 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 106568 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 106569 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106628 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106629 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106683 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106684 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106738 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106739 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106798 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106799 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106858 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106859 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106918 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106919 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106978 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 106979 taaagcactgtttcggtgcgggccgcgagagc 107010
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || || ||| |||||||| ||| ||||||||||||||||| Sbjct: 132479 gtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaa 132420 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132419 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 132360 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132359 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 132300 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 132299 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 132243 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 132242 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 132184 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132183 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 132129 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132128 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 132069 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 132068 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 132009 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132008 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 131949 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131948 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 131889 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 131888 gcgggccgcgagagc 131874 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || || ||| |||||||| ||| ||||||||||||||||| Sbjct: 104399 gtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaa 104458 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104459 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 104518 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104519 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 104578 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 104579 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 104635 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 104636 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 104694 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104695 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 104749 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104750 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 104809 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 104810 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 104869 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104870 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104929 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104930 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104989 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 104990 gcgggccgcgagagc 105004
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136598 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 136539 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136538 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 136479 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 136478 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 136419 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 136418 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 136364 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136363 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 136309 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 136308 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 136249 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 136248 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 136189 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136188 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 136129 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136128 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 136069 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 136068 taaagcactgtttcggtgcgggccgcgagagc 136037 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106959 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 107018 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107019 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 107078 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 107079 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 107138 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 107139 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 107193 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 107194 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 107248 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 107249 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 107308 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 107309 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 107368 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107369 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 107428 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107429 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 107488 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 107489 taaagcactgtttcggtgcgggccgcgagagc 107520
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135206 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 135147 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135146 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135087 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135086 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135027 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135026 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 134972 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 134971 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 134917 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134916 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134857 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134856 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134797 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134796 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134737 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134736 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134677 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 134676 taaagcactgtttcggtgcgggccgcgagagc 134645 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105830 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 105889 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105890 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 105949 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 105950 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106009 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106010 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106064 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106065 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106119 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106120 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106179 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106180 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106239 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106299 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106359 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 106360 taaagcactgtttcggtgcgggccgcgagagc 106391
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 132702 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaa 132643 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132642 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 132583 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132582 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 132523 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 132522 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 132466 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 132465 gctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagcc 132407 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132406 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 132352 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132351 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatg 132292 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 132291 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 132232 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132231 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 132172 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132171 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 132112 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 132111 gcgggccgcgagagc 132097 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 104062 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaa 104121 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104122 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 104181 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104182 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 104241 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 104242 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 104298 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 104299 gctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagcc 104357 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104358 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 104412 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104413 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatg 104472 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 104473 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 104532 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104533 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104592 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104593 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104652 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 104653 gcgggccgcgagagc 104667
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135341 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 135282 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135281 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135222 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135221 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135162 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135161 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 135107 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135106 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 135052 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135051 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134992 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134991 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134932 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134931 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134872 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134871 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134812 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 134811 taaagcactgtttcggtgcgggccgcgagagc 134780 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106002 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 106061 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106062 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 106121 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 106122 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106181 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106182 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106236 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106237 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106291 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106292 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106351 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106352 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106411 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106412 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106471 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106472 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106531 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 106532 taaagcactgtttcggtgcgggccgcgagagc 106563
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135339 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 135280 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135279 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135220 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135219 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135160 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135159 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 135105 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135104 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 135050 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 135049 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134990 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134989 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134930 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134929 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134870 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134869 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134810 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 134809 taaagcactgtttcggtgcgggccgcgagagc 134778 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105999 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 106058 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106059 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 106118 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 106119 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106178 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106179 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106233 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106234 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106288 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106289 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106348 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106349 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106408 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106409 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106468 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106528 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 106529 taaagcactgtttcggtgcgggccgcgagagc 106560
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135251 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 135192 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135191 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135132 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135131 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135072 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135071 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 135017 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135016 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 134962 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134961 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134902 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134901 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134842 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134841 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134782 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134722 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 134721 taaagcactgtttcggtgcgggccgcgagagc 134690 Score = 902 bits (455), Expect = 0.0 Identities = 544/572 (95%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105877 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 105936 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105937 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 105996 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 105997 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106056 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106057 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106111 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106112 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 106166 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106167 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106226 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106227 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106286 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106287 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106346 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106347 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106406 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 106407 taaagcactgtttcggtgcgggccgcgagagc 106438
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 133663 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaa 133604 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133603 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 133544 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133543 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 133484 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 133483 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 133427 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 133426 gctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagcc 133368 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 133367 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 133313 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133312 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatg 133253 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 133252 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 133193 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133192 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 133133 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133132 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 133073 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 133072 gcgggccgcgagagc 133058 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 104986 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaa 105045 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105046 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 105105 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105106 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 105165 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 105166 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 105222 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 105223 gctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagcc 105281 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105282 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 105336 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105337 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatg 105396 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 105397 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 105456 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105457 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 105516 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105517 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 105576 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 105577 gcgggccgcgagagc 105591
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || || ||| |||||||| ||| ||||||||||||||||| Sbjct: 132472 gtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaa 132413 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132412 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 132353 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132352 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 132293 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 132292 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 132236 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 132235 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 132177 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132176 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 132122 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132121 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 132062 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 132061 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 132002 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132001 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 131942 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131941 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 131882 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 131881 gcgggccgcgagagc 131867 Score = 902 bits (455), Expect = 0.0 Identities = 578/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || || ||| |||||||| ||| ||||||||||||||||| Sbjct: 104397 gtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaa 104456 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104457 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 104516 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104517 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 104576 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 104577 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 104633 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 104634 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 104692 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104693 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 104747 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104748 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 104807 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 104808 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 104867 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104868 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 104927 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104928 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104987 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 104988 gcgggccgcgagagc 105002
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 900 bits (454), Expect = 0.0 Identities = 544/572 (95%), Gaps = 9/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131452 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 131393 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131392 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 131333 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 131332 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 131273 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| ||||| |||||||||||||||| | || | |||||||||||| Sbjct: 131272 acatgaaaccgta---agctctcaagcagtgggagggggaccagacc-ctgaccgcgtgc 131217 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131216 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 131162 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 131161 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 131102 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 131101 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 131042 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131041 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 130982 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130981 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 130922 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 130921 taaagcactgtttcggtgcgggccgcgagagc 130890 Score = 900 bits (454), Expect = 0.0 Identities = 544/572 (95%), Gaps = 9/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101993 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 102052 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102053 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 102112 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 102113 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 102172 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| ||||| |||||||||||||||| | || | |||||||||||| Sbjct: 102173 acatgaaaccgta---agctctcaagcagtgggagggggaccagacc-ctgaccgcgtgc 102228 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102229 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 102283 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 102284 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 102343 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 102344 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 102403 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102404 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 102463 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102464 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 102523 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 102524 taaagcactgtttcggtgcgggccgcgagagc 102555
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 894 bits (451), Expect = 0.0 Identities = 577/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || || ||| |||||||| ||| ||||||||||||||||| Sbjct: 131371 gtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaa 131312 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131311 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 131252 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131251 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 131192 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 131191 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 131135 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 131134 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 131076 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131075 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 131021 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131020 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 130961 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 130960 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 130901 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130900 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 130841 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130840 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 130781 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 130780 gcgggccgcgagagc 130766 Score = 894 bits (451), Expect = 0.0 Identities = 577/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || || ||| |||||||| ||| ||||||||||||||||| Sbjct: 103264 gtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaa 103323 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103324 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 103383 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103384 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 103443 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 103444 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 103500 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 103501 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 103559 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 103560 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 103614 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103615 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 103674 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 103675 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 103734 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103735 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 103794 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103795 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 103854 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 103855 gcgggccgcgagagc 103869
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 894 bits (451), Expect = 0.0 Identities = 577/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | |||||||||||||| Sbjct: 295 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgag 354 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 414 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 474 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 475 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 531 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | || ||||||||||||||||||||||||||||||| Sbjct: 532 gctcccaagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagcc 590 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 591 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 645 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 646 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatg 705 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 706 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 765 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 825 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 885 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 886 gcgggccgcgagagc 900
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 894 bits (451), Expect = 0.0 Identities = 543/572 (94%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135218 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 135159 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135158 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 135099 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135098 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135039 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 135038 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 134984 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 134983 ctgttgaagaatgagccggcgactaataggcagtggcttggttaagggaac-----ccac 134929 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 134928 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 134869 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 134868 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 134809 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134808 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 134749 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134748 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 134689 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 134688 taaagcactgtttcggtgcgggccgcgagagc 134657 Score = 894 bits (451), Expect = 0.0 Identities = 543/572 (94%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105844 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 105903 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105904 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 105963 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 105964 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 106023 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 106024 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 106078 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 106079 ctgttgaagaatgagccggcgactaataggcagtggcttggttaagggaac-----ccac 106133 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 106134 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 106193 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 106194 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 106253 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106254 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 106313 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106314 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 106373 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 106374 taaagcactgtttcggtgcgggccgcgagagc 106405
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 894 bits (451), Expect = 0.0 Identities = 577/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||| |||||| ||||| ||||||||||||||| Sbjct: 297 gtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaa 356 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 416 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 417 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccg 476 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 477 tgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccgta---a 533 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 534 gctcccaagcagtgggaggagcctgggg-ctctgaccgcgtgcctgttgaagaatgagcc 592 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 593 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 647 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 707 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 708 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 767 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 827 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 887 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 888 gcgggccgcgagagc 902
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 890 bits (449), Expect = 0.0 Identities = 541/570 (94%), Gaps = 10/570 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 142537 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 142478 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142477 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 142418 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 142417 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 142358 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| ||||||||||||||||||| | || | |||||||||||||||| Sbjct: 142357 atgaaaccgtag---gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 142303 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142302 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 142248 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 142247 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 142188 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 142187 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgac 142128 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142127 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 142068 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142067 gctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 142008 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 142007 aagcactgtttcggtgcgggccgcgagagc 141978 Score = 890 bits (449), Expect = 0.0 Identities = 541/570 (94%), Gaps = 10/570 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110791 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 110850 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110851 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 110910 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110911 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 110970 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| ||||||||||||||||||| | || | |||||||||||||||| Sbjct: 110971 atgaaaccgtag---gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcct 111025 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111026 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 111080 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 111081 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 111140 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 111141 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgac 111200 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111201 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 111260 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111261 gctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 111320 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 111321 aagcactgtttcggtgcgggccgcgagagc 111350
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 882 bits (445), Expect = 0.0 Identities = 577/616 (93%), Gaps = 13/616 (2%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||| |||||| ||| | ||||||||||||||| Sbjct: 139208 gtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaa 139149 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 139089 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139088 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 139029 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| |||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 139028 tgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgta---a 138972 Query: 250 gctcccaagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgagc 308 ||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 138971 gctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagc 138914 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138913 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 138859 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 138858 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 138799 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 138798 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 138739 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138738 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 138679 Query: 549 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138678 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 138619 Query: 609 tgcgggctgcgcgagc 624 ||||||| ||| |||| Sbjct: 138618 tgcgggccgcgagagc 138603 Score = 882 bits (445), Expect = 0.0 Identities = 577/616 (93%), Gaps = 13/616 (2%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||| |||||| ||| | ||||||||||||||| Sbjct: 109889 gtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaa 109948 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109949 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 110008 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110009 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 110068 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| |||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 110069 tgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccgta---a 110125 Query: 250 gctcccaagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgagc 308 ||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 110126 gctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagc 110183 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110184 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 110238 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110239 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 110298 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 110299 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 110358 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110359 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 110418 Query: 549 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110419 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 110478 Query: 609 tgcgggctgcgcgagc 624 ||||||| ||| |||| Sbjct: 110479 tgcgggccgcgagagc 110494
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 882 bits (445), Expect = 0.0 Identities = 545/574 (94%), Gaps = 12/574 (2%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2108 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 2167 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2168 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 2227 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 2228 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 2287 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 2288 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 2342 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2343 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 2397 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2398 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 2457 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga-ggtccgaacc 471 |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| Sbjct: 2458 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtccgaacc 2517 Query: 472 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat-gccactcgaacc 530 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2518 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatggccactcgaacc 2577 Query: 531 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagg 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2578 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagg 2637 Query: 591 ggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||| ||| |||| Sbjct: 2638 ggtaaagcactgtttcggtgcgggccgcgagagc 2671
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 880 bits (444), Expect = 0.0 Identities = 540/570 (94%), Gaps = 9/570 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140019 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 139960 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139959 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 139900 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 139899 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 139840 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| || ||||||||||||||||| || | | |||||||||||||||| Sbjct: 139839 atgaaaccgta---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcct 139784 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139783 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 139729 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 139728 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 139669 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 139668 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 139609 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139608 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 139549 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139548 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 139489 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 139488 aagcactgtttcggtgcgggccgcgagagc 139459 Score = 880 bits (444), Expect = 0.0 Identities = 540/570 (94%), Gaps = 9/570 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110041 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 110100 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110101 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 110160 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110161 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 110220 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| || ||||||||||||||||| || | | |||||||||||||||| Sbjct: 110221 atgaaaccgta---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcct 110276 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110277 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 110331 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 110332 gagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctg 110391 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 110392 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 110451 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110452 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 110511 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110512 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggta 110571 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 110572 aagcactgtttcggtgcgggccgcgagagc 110601
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 878 bits (443), Expect = 0.0 Identities = 575/615 (93%), Gaps = 11/615 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| | || |||||| |||||||| ||| | ||||||||||||||| Sbjct: 304 gtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccagtagccgaa 363 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 423 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 483 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| | Sbjct: 484 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta---a 540 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 541 gctcccaagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagcc 599 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 600 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 654 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 cgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 714 Query: 430 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 489 ||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 715 accaggatggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatc 774 Query: 490 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 834 Query: 550 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 894 Query: 610 gcgggctgcgcgagc 624 |||||| ||| |||| Sbjct: 895 gcgggccgcgagagc 909
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 878 bits (443), Expect = 0.0 Identities = 541/572 (94%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139371 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 139312 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139311 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccat 139252 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 139251 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 139192 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgc 292 ||||||||| |||||||||||||||||||| || | | |||||||||||||| Sbjct: 139191 atgaaaccgta---agctcccaagcagtgggaggagactactaggactctgaccgcgtgc 139135 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139134 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 139080 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 139079 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 139020 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 139019 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 138960 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138959 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 138900 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138899 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 138840 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 138839 taaagcactgtttcggtgcgggccgcgagagc 138808 Score = 878 bits (443), Expect = 0.0 Identities = 541/572 (94%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109928 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 109987 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 109988 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccat 110047 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 110048 agcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 110107 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgc 292 ||||||||| |||||||||||||||||||| || | | |||||||||||||| Sbjct: 110108 atgaaaccgta---agctcccaagcagtgggaggagactactaggactctgaccgcgtgc 110164 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110165 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 110219 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 110220 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 110279 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 110280 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 110339 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110340 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 110399 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110400 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 110459 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 110460 taaagcactgtttcggtgcgggccgcgagagc 110491
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 872 bits (440), Expect = 0.0 Identities = 539/570 (94%), Gaps = 9/570 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106346 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 106405 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106406 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106465 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106466 agtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106525 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||| ||||||||||||||| || || |||||||||||||||| Sbjct: 106526 atgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcct 106581 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106582 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 106636 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| Sbjct: 106637 gagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctg 106696 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106697 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106756 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106757 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 106816 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106817 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 106876 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 106877 aagcactgtttcggtgcgggccgcgagagc 106906 Score = 837 bits (422), Expect = 0.0 Identities = 538/572 (94%), Gaps = 11/572 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctc-tgacccgagtagcatggggcacgt 113 |||||||||||||||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 135562 agtccagtagccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgt 135503 Query: 114 ggaatcccgtgtgaatcagc-aaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 ggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccg 135443 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 135442 atagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 135383 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||| ||||||||||||||| || || |||||||||||||| Sbjct: 135382 acatgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgc 135327 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135326 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 135272 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||| Sbjct: 135271 cggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacc 135212 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 135211 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 135152 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135151 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 135092 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135091 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 135032 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 135031 taaagcactgtttcggtgcgggccgcgagagc 135000
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 872 bits (440), Expect = 0.0 Identities = 539/570 (94%), Gaps = 9/570 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135839 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 135780 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135779 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 135720 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135719 agtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 135660 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||| ||||||||||||||| || || |||||||||||||||| Sbjct: 135659 atgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcct 135604 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 135603 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 135549 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| Sbjct: 135548 gagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctg 135489 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 135488 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 135429 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135428 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 135369 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135368 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 135309 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 135308 aagcactgtttcggtgcgggccgcgagagc 135279 Score = 872 bits (440), Expect = 0.0 Identities = 539/570 (94%), Gaps = 9/570 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106568 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 106627 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106628 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 106687 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 106688 agtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 106747 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||| ||||||||||||||| || || |||||||||||||||| Sbjct: 106748 atgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgaccgcgtgcct 106803 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106804 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccaccg 106858 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| Sbjct: 106859 gagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctg 106918 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 106919 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 106978 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106979 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 107038 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107039 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 107098 Query: 595 aagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||| ||| |||| Sbjct: 107099 aagcactgtttcggtgcgggccgcgagagc 107128
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 866 bits (437), Expect = 0.0 Identities = 540/572 (94%), Gaps = 13/572 (2%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 499 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 500 tggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccg 559 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||| Sbjct: 560 atagcgaagtagtaccgtgagggaagggtgaaaagaacccc-atcggggagtgaaataga 618 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | | |||||||||||||| Sbjct: 619 acatgaaaccgta---agctcccaagcagtgggaggccaggg----ctctgaccgcgtgc 671 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 672 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 726 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 727 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 786 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 787 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 846 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 906 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 966 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 967 taaagcactgtttcggtgcgggccgcgagagc 998
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 858 bits (433), Expect = 0.0 Identities = 540/573 (94%), Gaps = 12/573 (2%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 835 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 894 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 954 Query: 173 atagcgaagtagtacc-gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 231 ||||| || ||||||| ||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 955 atagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatag 1014 Query: 232 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 291 ||| ||||||||| ||||| |||||||||||||| || || ||||||||||||| Sbjct: 1015 aacatgaaaccgta---agctctcaagcagtgggaggagacagg---ctctgaccgcgtg 1068 Query: 292 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 351 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1069 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----cca 1123 Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 411 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 1124 ccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaac 1183 Query: 412 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 471 ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 1184 ctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtccgaacc 1243 Query: 472 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1244 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 1303 Query: 532 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggg 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1304 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggg 1363 Query: 592 gtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||| ||| |||| Sbjct: 1364 gtaaagcactgtttcggtgcgggccgcgagagc 1396
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 858 bits (433), Expect = 0.0 Identities = 539/571 (94%), Gaps = 10/571 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131527 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 131468 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 131408 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 131407 agtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 131348 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcc 293 ||||||||| |||||||||||||||||||| || | || ||||||||||||||| Sbjct: 131347 atgaaaccgta---agctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcc 131292 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131291 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccacc 131237 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 131236 ggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacct 131177 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 131176 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 131117 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131116 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 131057 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 593 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131056 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggt 130997 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||| ||| |||| Sbjct: 130996 aaagcactgtttcggtgcgggccgcgagagc 130966 Score = 858 bits (433), Expect = 0.0 Identities = 539/571 (94%), Gaps = 10/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103867 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 103926 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103927 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 103986 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 103987 agtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaac 104046 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcc 293 ||||||||| |||||||||||||||||||| || | || ||||||||||||||| Sbjct: 104047 atgaaaccgta---agctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcc 104102 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104103 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccacc 104157 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 104158 ggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacct 104217 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 104218 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 104277 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104278 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 104337 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 593 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104338 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggt 104397 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||| ||| |||| Sbjct: 104398 aaagcactgtttcggtgcgggccgcgagagc 104428
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 856 bits (432), Expect = 0.0 Identities = 538/572 (94%), Gaps = 11/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 347 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 406 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 466 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| | Sbjct: 467 atagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaa 526 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| ||||| |||||||||||||| || || |||||| ||||||| Sbjct: 527 acatgaaaccgta---agctctcaagcagtgggaggagacagg---ctctgaacgcgtgc 580 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||| ||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 581 ctgttgaaaaatgagccggcgactcatacgcagtggcttggttaagggaac-----ccac 635 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 636 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 695 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 696 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 755 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 815 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 875 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||| ||| |||| Sbjct: 876 taaagcactgtttcggtgcgggccgcgagagc 907
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 850 bits (429), Expect = 0.0 Identities = 573/617 (92%), Gaps = 11/617 (1%) Strand = Plus / Plus Query: 11 tgtgctgctaggcgaa-cggttgagtgccgcaccctannggctaa-agtccagtagccga 68 |||||||||||||||| ||||||||| | |||||||| | | | |||||||||||||| Sbjct: 86559 tgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccga 86618 Query: 69 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 128 |||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 86619 aagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 86678 Query: 129 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86679 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 86738 Query: 189 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 248 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 86739 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 86795 Query: 249 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 308 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 86796 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 86855 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 86856 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 86910 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86911 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86970 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86971 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 87030 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87031 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 87090 Query: 549 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 607 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 87091 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 87150 Query: 608 gtgcgggctgcgcgagc 624 || ||||| ||| |||| Sbjct: 87151 gtacgggccgcgagagc 87167
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 850 bits (429), Expect = 0.0 Identities = 537/571 (94%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 342 agtccagtagccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtg 401 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 402 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 461 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 462 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaac 521 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 522 atgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcct 578 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| ||||| |||||| ||||||||||||| |||||| Sbjct: 579 gttgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccaccg 633 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 634 gagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctg 693 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 694 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 753 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 813 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 873 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 874 aaagcactgtttcggtgcgggctgcgagagc 904
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 848 bits (428), Expect = 0.0 Identities = 566/608 (93%), Gaps = 11/608 (1%) Strand = Plus / Plus Query: 11 tgtgctgctaggcgaa-cggttgagtgccgcaccctannggctaa-agtccagtagccga 68 |||||||||||||||| ||||||||| | |||||||| | | | |||||||||||||| Sbjct: 88645 tgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccga 88704 Query: 69 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 128 |||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 88705 aagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaa 88764 Query: 129 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88765 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 88824 Query: 189 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 248 ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 88825 gtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta--- 88881 Query: 249 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 308 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 88882 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 88941 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 88942 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 88996 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 88997 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 89056 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 89057 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 89116 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89117 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 89176 Query: 549 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 607 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89177 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 89236 Query: 608 gtgcgggc 615 || ||||| Sbjct: 89237 gtacgggc 89244
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 846 bits (427), Expect = 0.0 Identities = 537/572 (93%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4570 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 4629 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4630 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 4689 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 4690 atagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaataga 4749 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | | | |||||||||||||| Sbjct: 4750 acatgaaaccgta---agctcccaagcagtgggaggagctgggg--ctctgaccgcgtgc 4804 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4805 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccac 4859 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4860 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 4919 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 4920 tgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccg 4979 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4980 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaaccca 5039 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5040 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 5099 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||| |||||| ||| |||| Sbjct: 5100 taaagcactgtttcggcgcgggccgcgagagc 5131
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 846 bits (427), Expect = 0.0 Identities = 574/619 (92%), Gaps = 11/619 (1%) Strand = Plus / Minus Query: 9 gttgtgctgctaggcgaa-cggttgagtgccgcacccta-nnggctaaagtccagtagcc 66 |||||| ||||||||||| | ||||||| | |||||||| || ||||||||||| || Sbjct: 115917 gttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaacc 115858 Query: 67 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 126 ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 115857 gaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtg 115798 Query: 127 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 186 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 115797 aatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagta 115738 Query: 187 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 246 ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 115737 ccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg--- 115681 Query: 247 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 306 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 115680 taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatga 115621 Query: 307 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 366 |||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| Sbjct: 115620 gccggcgacttataggcagtggcctggttaag-----ggagcccaccggagccgtagcga 115566 Query: 367 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 426 ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115565 aagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 115506 Query: 427 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 486 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct: 115505 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaa 115446 Query: 487 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115445 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 115386 Query: 547 tccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgttt 605 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115385 tccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgttt 115326 Query: 606 cggtgcgggctgcgcgagc 624 |||||||||||||| |||| Sbjct: 115325 cggtgcgggctgcgagagc 115307 Score = 846 bits (427), Expect = 0.0 Identities = 574/619 (92%), Gaps = 11/619 (1%) Strand = Plus / Plus Query: 9 gttgtgctgctaggcgaa-cggttgagtgccgcacccta-nnggctaaagtccagtagcc 66 |||||| ||||||||||| | ||||||| | |||||||| || ||||||||||| || Sbjct: 86203 gttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaacc 86262 Query: 67 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 126 ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 86263 gaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtg 86322 Query: 127 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 186 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 86323 aatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagta 86382 Query: 187 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 246 ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 86383 ccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg--- 86439 Query: 247 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 306 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 86440 taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatga 86499 Query: 307 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 366 |||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||| Sbjct: 86500 gccggcgacttataggcagtggcctggttaag-----ggagcccaccggagccgtagcga 86554 Query: 367 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 426 ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86555 aagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 86614 Query: 427 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 486 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct: 86615 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaa 86674 Query: 487 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86675 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 86734 Query: 547 tccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgttt 605 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 86735 tccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgttt 86794 Query: 606 cggtgcgggctgcgcgagc 624 |||||||||||||| |||| Sbjct: 86795 cggtgcgggctgcgagagc 86813
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 846 bits (427), Expect = 0.0 Identities = 537/572 (93%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23355 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 23296 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23295 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 23236 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 23235 atagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaataga 23176 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | | | |||||||||||||| Sbjct: 23175 acatgaaaccgta---agctcccaagcagtgggaggagctgggg--ctctgaccgcgtgc 23121 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23120 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccac 23066 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 23065 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 23006 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 23005 tgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccg 22946 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 22945 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaaccca 22886 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22885 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 22826 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||| |||||| ||| |||| Sbjct: 22825 taaagcactgtttcggcgcgggccgcgagagc 22794
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 846 bits (427), Expect = 0.0 Identities = 574/619 (92%), Gaps = 11/619 (1%) Strand = Plus / Plus Query: 9 gttgtgctgctaggcgaa-cggttgagtgccgcaccctannggctaa-agtccagtagcc 66 |||||| ||||||||||| ||||||||| |||||||| | | | | |||||||||||| Sbjct: 294 gttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccagtagcc 353 Query: 67 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 126 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 354 gaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtg 413 Query: 127 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 473 Query: 187 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 246 ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 474 ccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta- 532 Query: 247 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 306 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 533 --agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatga 590 Query: 307 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 366 |||||||||| ||||| |||||| |||||||||| || |||||||||||||||||| Sbjct: 591 gccggcgacttataggtagtggcctggttaaggggac-----ccaccggagccgtagcga 645 Query: 367 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 426 ||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 646 aagcgagtcttcctggggcaattgtcactacttatggacccgaacctgggtgatctatcc 705 Query: 427 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 486 ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| | Sbjct: 706 atgaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaa 765 Query: 487 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 825 Query: 547 tccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgttt 605 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 826 tccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgttt 885 Query: 606 cggtgcgggctgcgcgagc 624 |||||||||||||| |||| Sbjct: 886 cggtgcgggctgcgagagc 904
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 842 bits (425), Expect = 0.0 Identities = 564/607 (92%), Gaps = 13/607 (2%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaacgg--ttgagtgccgcaccctann-ggctaaagtccagtagccga 68 ||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||| Sbjct: 52390 gtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccga 52331 Query: 69 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 128 |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 52330 aagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaa 52271 Query: 129 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 188 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 52270 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtacc 52211 Query: 189 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 248 ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 52210 gtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta--- 52154 Query: 249 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 308 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 52153 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 52096 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 52095 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 52041 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52040 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 51981 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 51980 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 51921 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51920 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 51861 Query: 549 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 51860 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 51801 Query: 609 tgcgggc 615 ||||||| Sbjct: 51800 tgcgggc 51794 Score = 842 bits (425), Expect = 0.0 Identities = 564/607 (92%), Gaps = 13/607 (2%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaacgg--ttgagtgccgcaccctann-ggctaaagtccagtagccga 68 ||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||| Sbjct: 37438 gtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccga 37497 Query: 69 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 128 |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 37498 aagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaa 37557 Query: 129 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 188 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 37558 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtacc 37617 Query: 189 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 248 ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 37618 gtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta--- 37674 Query: 249 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 308 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 37675 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 37732 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 37733 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 37787 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37788 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 37847 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 37848 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 37907 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37908 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 37967 Query: 549 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 37968 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 38027 Query: 609 tgcgggc 615 ||||||| Sbjct: 38028 tgcgggc 38034
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 842 bits (425), Expect = 0.0 Identities = 564/607 (92%), Gaps = 13/607 (2%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaacgg--ttgagtgccgcaccctann-ggctaaagtccagtagccga 68 ||||||||||||||||| |||| ||| |||||||| ||| |||||||||||||||| Sbjct: 4366 gtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccga 4425 Query: 69 aagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaa 128 |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4426 aagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaa 4485 Query: 129 tcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtacc 188 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 4486 tcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtacc 4545 Query: 189 gtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctg 248 ||||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||| Sbjct: 4546 gtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccgta--- 4602 Query: 249 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 308 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 4603 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 4660 Query: 309 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 368 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 4661 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 4715 Query: 369 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 428 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4716 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 4775 Query: 429 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 488 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 4776 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 4835 Query: 489 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4836 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 4895 Query: 549 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4896 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 4955 Query: 609 tgcgggc 615 ||||||| Sbjct: 4956 tgcgggc 4962
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 835 bits (421), Expect = 0.0 Identities = 535/571 (93%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||| |||||||||| || | |||||||||| ||||||||||||||||||||||| Sbjct: 346 agtccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtg 405 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 465 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 466 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 525 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 526 atgaaaccgta---agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcct 582 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 583 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccaccg 637 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 |||||||||||||||| |||||| | |||| |||||||||||||||||||||||||||| Sbjct: 638 gagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaacctg 697 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 698 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 757 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 817 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 818 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggggt 877 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 878 aaagcactgtttcggtgcgggctgcgagagc 908
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 835 bits (421), Expect = 0.0 Identities = 568/613 (92%), Gaps = 11/613 (1%) Strand = Plus / Minus Query: 10 ttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccg 67 ||||||||||||||||| ||||||||| |||||||||| ||| | ||||||||||||| Sbjct: 128146 ttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccg 128087 Query: 68 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 127 ||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 128086 aaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtga 128027 Query: 128 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 128026 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtac 127967 Query: 188 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 247 |||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 127966 cgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccgta-- 127909 Query: 248 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 307 |||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||| Sbjct: 127908 -agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgag 127850 Query: 308 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 367 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 127849 ccggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 127795 Query: 368 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 427 |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 127794 agcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatcca 127735 Query: 428 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 487 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| || Sbjct: 127734 tgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaa 127675 Query: 488 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127674 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 127615 Query: 548 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 606 ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 127614 ccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttc 127555 Query: 607 ggtgcgggctgcg 619 ||||||||||||| Sbjct: 127554 ggtgcgggctgcg 127542 Score = 835 bits (421), Expect = 0.0 Identities = 568/613 (92%), Gaps = 11/613 (1%) Strand = Plus / Plus Query: 10 ttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccg 67 ||||||||||||||||| ||||||||| |||||||||| ||| | ||||||||||||| Sbjct: 95301 ttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccg 95360 Query: 68 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 127 ||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 95361 aaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtga 95420 Query: 128 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95421 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtac 95480 Query: 188 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 247 |||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 95481 cgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccgta-- 95538 Query: 248 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 307 |||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||| Sbjct: 95539 -agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgag 95597 Query: 308 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 367 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 95598 ccggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaa 95652 Query: 368 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 427 |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 95653 agcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatcca 95712 Query: 428 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 487 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| || Sbjct: 95713 tgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaa 95772 Query: 488 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95773 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 95832 Query: 548 ccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttc 606 ||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 95833 ccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttc 95892 Query: 607 ggtgcgggctgcg 619 ||||||||||||| Sbjct: 95893 ggtgcgggctgcg 95905
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 807 bits (407), Expect = 0.0 Identities = 533/572 (93%), Gaps = 11/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4839 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacg 4898 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4899 tgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 4958 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 4959 atagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaataga 5018 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| ||||||||| |||||||||| | | | |||||||||||||| Sbjct: 5019 acatgaaaccgta---agctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgc 5072 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5073 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccac 5127 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 5128 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 5187 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 ||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||| Sbjct: 5188 tgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccg 5247 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 5248 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaaccca 5307 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5308 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 5367 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||| |||||| ||| |||| Sbjct: 5368 taaagcactgtttcggcgcgggccgcgagagc 5399
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 807 bits (407), Expect = 0.0 Identities = 533/572 (93%), Gaps = 11/572 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4839 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacg 4898 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4899 tgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 4958 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 4959 atagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaataga 5018 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| ||||||||| |||||||||| | | | |||||||||||||| Sbjct: 5019 acatgaaaccgta---agctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgc 5072 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5073 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-----ccac 5127 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 5128 cggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacc 5187 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 ||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||| Sbjct: 5188 tgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccg 5247 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 5248 actgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaaccca 5307 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5308 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 5367 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||| |||||| ||| |||| Sbjct: 5368 taaagcactgtttcggcgcgggccgcgagagc 5399
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 805 bits (406), Expect = 0.0 Identities = 532/571 (93%), Gaps = 6/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||| |||||||||| || ||||| ||||| ||||||||| ||||||||||||| Sbjct: 325 agtccagtaaccgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtg 384 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 444 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 445 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 504 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||| Sbjct: 505 atgaaaccgta---agcttccaagcagtgggaggagaatcggatctctgaccgcgtgcct 561 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| | | |||||| Sbjct: 562 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaaagaa--ccaccg 619 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 620 gagccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaacctg 679 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 680 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 739 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 799 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 800 gctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggggt 859 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||| ||| |||| Sbjct: 860 aaagcactgtttcggtgcgggccgcgagagc 890
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 803 bits (405), Expect = 0.0 Identities = 531/571 (92%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||||||||| |||| |||| || | ||||||||||||||||||||||| Sbjct: 4231 agtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtg 4290 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4291 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 4350 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 4351 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 4410 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||| Sbjct: 4411 atgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcct 4467 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 4468 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccg 4522 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 4523 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 4582 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 4583 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 4642 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4643 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 4702 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4703 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 4762 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 4763 aaagcactgtttcggtgcgggctgcgagagc 4793
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 803 bits (405), Expect = 0.0 Identities = 531/571 (92%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||||||||| |||| |||| || | ||||||||||||||||||||||| Sbjct: 341 agtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtg 400 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 460 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 461 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 520 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||| Sbjct: 521 atgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcct 577 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 578 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccg 632 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 633 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 692 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 752 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 812 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 872 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagc 903
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 803 bits (405), Expect = 0.0 Identities = 531/571 (92%), Gaps = 9/571 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||||||||| |||| |||| || | ||||||||||||||||||||||| Sbjct: 150904 agtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtg 150845 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150844 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 150785 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 150784 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 150725 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||| Sbjct: 150724 atgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcct 150668 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 150667 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccg 150613 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 150612 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 150553 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 150552 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 150493 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150492 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 150433 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150432 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 150373 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 150372 aaagcactgtttcggtgcgggctgcgagagc 150342 Score = 803 bits (405), Expect = 0.0 Identities = 531/571 (92%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||||||||| |||| |||| || | ||||||||||||||||||||||| Sbjct: 117762 agtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtg 117821 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117822 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 117881 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 117882 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 117941 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||| Sbjct: 117942 atgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcct 117998 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 117999 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccg 118053 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 118054 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 118113 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 118114 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 118173 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118174 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 118233 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118234 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 118293 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 118294 aaagcactgtttcggtgcgggctgcgagagc 118324
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 803 bits (405), Expect = 0.0 Identities = 531/571 (92%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||||||||| |||| |||| || | ||||||||||||||||||||||| Sbjct: 341 agtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtg 400 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 460 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 461 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 520 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||| |||| ||| ||||||||||||||||||| Sbjct: 521 atgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcct 577 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 578 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-----caccg 632 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 633 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 692 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 693 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 752 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 812 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 813 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 872 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| |||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagc 903
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 799 bits (403), Expect = 0.0 Identities = 486/512 (94%), Gaps = 10/512 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 314 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 373 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 433 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 434 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 493 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||||||||||||||||||| | || | |||||||||||||| Sbjct: 494 acatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 548 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 549 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-----ccac 603 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 604 cggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacc 663 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 664 tgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccg 723 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 783 Query: 533 gagctagctggttctccccgaaatgcgttgag 564 |||||||||||||||||||||||||||||||| Sbjct: 784 gagctagctggttctccccgaaatgcgttgag 815
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 797 bits (402), Expect = 0.0 Identities = 532/572 (93%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagctt-atgctctgacccgagtagcatggggcacgt 113 |||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| Sbjct: 146218 agtccagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgc 146159 Query: 114 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 173 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 146158 agaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccga 146099 Query: 174 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 233 |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 146098 tagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaa 146039 Query: 234 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 293 | ||||||||| ||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 146038 catgaaaccgtag---gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcc 145982 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 145981 tgttgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccacc 145927 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 145926 ggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacct 145867 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 145866 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 145807 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145806 ctgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccag 145747 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 145746 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctagggg 145687 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||| |||| Sbjct: 145686 taaagcactgtttcggtgcgggctgcgagagc 145655 Score = 797 bits (402), Expect = 0.0 Identities = 532/572 (93%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagctt-atgctctgacccgagtagcatggggcacgt 113 |||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||| Sbjct: 112244 agtccagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgc 112303 Query: 114 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 173 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112304 agaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccga 112363 Query: 174 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 233 |||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 112364 tagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaa 112423 Query: 234 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 293 | ||||||||| ||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 112424 catgaaaccgtag---gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcc 112480 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 112481 tgttgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccacc 112535 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 112536 ggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacct 112595 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 112596 gggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 112655 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112656 ctgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccag 112715 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112716 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctagggg 112775 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||| |||| Sbjct: 112776 taaagcactgtttcggtgcgggctgcgagagc 112807
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 797 bits (402), Expect = 0.0 Identities = 532/572 (93%), Gaps = 10/572 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactag-cttatgctctgacccgagtagcatggggcacgt 113 |||||||||||||||||||| || | || ||||||| |||||||||||||||||||||| Sbjct: 117808 agtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgt 117749 Query: 114 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 173 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 117748 ggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccga 117689 Query: 174 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 233 ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 117688 tagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaa 117629 Query: 234 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 293 | ||||||||| |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 117628 catgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcc 117572 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||| Sbjct: 117571 tgttgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccacc 117517 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| Sbjct: 117516 ggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacct 117457 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 117456 gggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 117397 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117396 ctgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 117337 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117336 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctagggg 117277 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||| |||| Sbjct: 117276 taaagcactgtttcggtgcgggctgcgagagc 117245 Score = 797 bits (402), Expect = 0.0 Identities = 532/572 (93%), Gaps = 10/572 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactag-cttatgctctgacccgagtagcatggggcacgt 113 |||||||||||||||||||| || | || ||||||| |||||||||||||||||||||| Sbjct: 90294 agtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgt 90353 Query: 114 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 173 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 90354 ggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccga 90413 Query: 174 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 233 ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 90414 tagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaa 90473 Query: 234 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 293 | ||||||||| |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 90474 catgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcc 90530 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||| Sbjct: 90531 tgttgaagaatgagccggcgacttataggtagtggcctggttaagggaac-----ccacc 90585 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| Sbjct: 90586 ggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacct 90645 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 90646 gggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccga 90705 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90706 ctgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 90765 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 90766 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctagggg 90825 Query: 593 taaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||| |||| Sbjct: 90826 taaagcactgtttcggtgcgggctgcgagagc 90857
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 795 bits (401), Expect = 0.0 Identities = 428/435 (98%), Gaps = 2/435 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 194 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 253 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 313 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 373 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 433 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 493 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 553 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 613 Query: 426 catgaccaggatgaa 440 ||||||||||||||| Sbjct: 614 catgaccaggatgaa 628
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 759 bits (383), Expect = 0.0 Identities = 517/557 (92%), Gaps = 11/557 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| ||||||| || | ||||| ||||| ||||||||||||||||||||||| Sbjct: 6206 agtccagtagtcgaaagcggcattggcttacgctctaacccgagtagcatggggcacgtg 6147 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6146 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 6087 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| Sbjct: 6086 agcgaagtagtaccgtgagggaaaggtgaaaagaacccctatcggggagtgaaatagaac 6027 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||||||| ||| ||||||||||||||| ||| | |||||||||||||||||| Sbjct: 6026 atgaaaccgta---agcctccaagcagtgggaggagaatggaatctctgaccgcgtgcct 5970 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 ||||||||||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 5969 tttgaagaatgagccggcgacttataggcagtggcttggttaagggcac-----ccaccg 5915 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt-atggacccgaacct 413 |||||||||||| |||||||||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 5914 gagccgtagcgagagcgagtcttcatagggcaattgtcactgctttatggacccgaacct 5855 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 5854 gggtgatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtccgaaccga 5796 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5795 ctgatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 5736 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctagggg 592 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 5735 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctagggg 5676 Query: 593 taaagcactgtttcggt 609 ||||||||||||||||| Sbjct: 5675 taaagcactgtttcggt 5659
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 749 bits (378), Expect = 0.0 Identities = 519/563 (92%), Gaps = 11/563 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||| | |||||||||||| || |||||||||||||||||||||| |||| Sbjct: 340 aaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacg 399 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 400 tgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaacca 459 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||| ||||||||||||||||||| ||||||||||||||| | |||| ||||||||||| Sbjct: 460 atagtaaagtagtaccgtgagggaagggtgaaaagaacccc-attggggagtgaaataga 518 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| |||| ||||||||||||||| | || | |||||||||||||| Sbjct: 519 acatgaaaccgta---agctaccaagcagtgggaggagccaggg--ctctgaccgcgtgc 573 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 574 ctgttgaagaatgagccggcgactcataggcagcggcttggttaagggaac-----ccac 628 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||| Sbjct: 629 cggagccatagcgaaagcgagtattcataggactattgtcactgcttatggacccgaacc 688 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| Sbjct: 689 tgggtgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccg 748 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 808 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 868 Query: 593 taaagcactgtttcggtgcgggc 615 |||||||||||||| |||||||| Sbjct: 869 taaagcactgtttcagtgcgggc 891
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 652 bits (329), Expect = 0.0 Identities = 514/571 (90%), Gaps = 6/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||| ||| | |||||| | |||| |||| |||||||||||||||| Sbjct: 144261 agtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgca 144320 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 144321 aaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgat 144380 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 144381 agcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 144440 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 |||||||| | |||||||||||||||||||| ||| | ||||||| ||||||||||| Sbjct: 144441 atgaaaccgcg---agctcccaagcagtgggaggagaatgagatctctaaccgcgtgcct 144497 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| ||||| ||||| ||||||||| | ||||| ||| Sbjct: 144498 gttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccg 144555 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| | |||| |||||||| |||||| ||||||||||| Sbjct: 144556 gagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctg 144615 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 144616 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 144675 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144676 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 144735 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 144736 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 144795 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 ||||||| ||| |||||||||||||| |||| Sbjct: 144796 aaagcaccgttccggtgcgggctgcgagagc 144826 Score = 652 bits (329), Expect = 0.0 Identities = 514/571 (90%), Gaps = 6/571 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||||||| ||| | |||||| | |||| |||| |||||||||||||||| Sbjct: 88590 agtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgca 88531 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||| Sbjct: 88530 aaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgat 88471 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 88470 agcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 88411 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 |||||||| | |||||||||||||||||||| ||| | ||||||| ||||||||||| Sbjct: 88410 atgaaaccgcg---agctcccaagcagtgggaggagaatgagatctctaaccgcgtgcct 88354 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| ||||| ||||| ||||||||| | ||||| ||| Sbjct: 88353 gttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccg 88296 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| | |||| |||||||| |||||| ||||||||||| Sbjct: 88295 gagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctg 88236 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 88235 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 88176 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88175 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 88116 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggt 593 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 88115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggt 88056 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 ||||||| ||| |||||||||||||| |||| Sbjct: 88055 aaagcaccgttccggtgcgggctgcgagagc 88025
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 652 bits (329), Expect = 0.0 Identities = 512/571 (89%), Gaps = 9/571 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 138926 agtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggcacgtg 138867 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||| |||||||| |||||||||| | ||||||||||||| ||||||||||||| Sbjct: 138866 gaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgaccgat 138807 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 138806 agcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 138747 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 |||||||| | ||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 138746 atgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgtgcct 138690 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||| | ||| |||||||| ||||||||||| Sbjct: 138689 gttgaagaatgagccggcgacttataggcggcggcctggttaag-----ggaacccaccg 138635 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| ||||| | |||| ||||||||||||||||||| | Sbjct: 138634 gagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccg 138575 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||| Sbjct: 138574 ggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgac 138515 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 138514 tgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccgga 138455 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggt 593 ||||||||||||||||||||||||||||||||||||| ||||||| || | || | ||| Sbjct: 138454 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggt 138395 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||| |||||||||||||| |||| Sbjct: 138394 aaagcactgttacggtgcgggctgcgagagc 138364 Score = 652 bits (329), Expect = 0.0 Identities = 512/571 (89%), Gaps = 9/571 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 82951 agtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggcacgtg 83010 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||| |||||||| |||||||||| | ||||||||||||| ||||||||||||| Sbjct: 83011 gaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgaccgat 83070 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 83071 agcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 83130 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 |||||||| | ||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct: 83131 atgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgtgcct 83187 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||| | ||| |||||||| ||||||||||| Sbjct: 83188 gttgaagaatgagccggcgacttataggcggcggcctggttaag-----ggaacccaccg 83242 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 ||||||||||||||||||||||| ||||| | |||| ||||||||||||||||||| | Sbjct: 83243 gagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccg 83302 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 |||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||| Sbjct: 83303 ggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgac 83362 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 83363 tgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccgga 83422 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggt 593 ||||||||||||||||||||||||||||||||||||| ||||||| || | || | ||| Sbjct: 83423 gctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggt 83482 Query: 594 aaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||| |||||||||||||| |||| Sbjct: 83483 aaagcactgttacggtgcgggctgcgagagc 83513
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 638 bits (322), Expect = e-180 Identities = 480/529 (90%), Gaps = 9/529 (1%) Strand = Plus / Plus Query: 92 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 151 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 152 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 211 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 271 |||| ||| ||||||||||||| ||||||||| ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggaga 554 Query: 272 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 331 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 332 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 391 |||||||| | ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 392 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 451 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 670 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 729 Query: 452 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 511 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 730 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 789 Query: 512 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 849 Query: 572 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 850 ggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 898
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 638 bits (322), Expect = e-180 Identities = 480/529 (90%), Gaps = 9/529 (1%) Strand = Plus / Plus Query: 92 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 151 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 152 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 211 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 271 |||| ||| ||||||||||||| ||||||||| ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggaga 567 Query: 272 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 331 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 332 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 391 |||||||| | ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 392 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 451 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 683 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 742 Query: 452 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 511 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 743 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 802 Query: 512 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 803 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 862 Query: 572 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 863 ggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 911
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 638 bits (322), Expect = e-180 Identities = 325/326 (99%) Strand = Plus / Plus Query: 299 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 359 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 418 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 419 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 479 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 539 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 599 actgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagc 327
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 636 bits (321), Expect = e-179 Identities = 324/325 (99%) Strand = Plus / Plus Query: 300 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 360 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 419 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 420 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 480 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 540 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 600 ctgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagc 325
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 632 bits (319), Expect = e-178 Identities = 480/529 (90%), Gaps = 11/529 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 333 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 391 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 392 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 451 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 787 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 846 Query: 452 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 511 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 847 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 906 Query: 512 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 966 Query: 572 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 967 ggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcg 1015
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 628 bits (317), Expect = e-177 Identities = 493/547 (90%), Gaps = 11/547 (2%) Strand = Plus / Plus Query: 68 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 127 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 128 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 187 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 188 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 247 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaacata-- 550 Query: 248 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 307 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 551 -agctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 308 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 367 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 368 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 427 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaacca 722 Query: 428 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 487 ||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 723 tgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaa 782 Query: 488 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 547 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 783 tcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttct 842 Query: 548 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 607 |||||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||| Sbjct: 843 ccccgaaatgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcg 901 Query: 608 gtgcggg 614 ||||||| Sbjct: 902 gtgcggg 908
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 628 bits (317), Expect = e-177 Identities = 410/439 (93%), Gaps = 9/439 (2%) Strand = Plus / Plus Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 306 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 365 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 366 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 425 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 426 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 485 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 486 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 351 Query: 546 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 605 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 352 ctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgttt 411 Query: 606 cggtgcgggctgcgcgagc 624 |||||||||| ||| |||| Sbjct: 412 cggtgcgggccgcgagagc 430
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 620 bits (313), Expect = e-174 Identities = 334/339 (98%), Gaps = 2/339 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 288 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 347 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 348 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 407 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 467 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 527 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 587 Query: 306 agccggcgactcataggcagtggcttggttaagggaacg 344 ||||||||||||||||||||||||||||||||||||||| Sbjct: 588 agccggcgactcataggcagtggcttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 611 bits (308), Expect = e-171 Identities = 332/338 (98%), Gaps = 2/338 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 248 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 307 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 308 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 367 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 427 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 487 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 488 ctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatg 547 Query: 306 agccggcgactcataggcagtggcttggttaagggaac 343 |||||||||||||||||||||||||||||||||||||| Sbjct: 548 agccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 605 bits (305), Expect = e-170 Identities = 422/457 (92%), Gaps = 11/457 (2%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 448 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 389 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 329 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 269 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | | Sbjct: 268 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taa 212 Query: 250 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 309 ||||||||||||||||||| | | | ||||||||||||||||||||||||||||||| Sbjct: 211 gctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagcc 153 Query: 310 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 369 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 152 ggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaaag 98 Query: 370 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 429 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 38 Query: 430 accaggatgaagcttggatgaaactaagcagaggtcc 466 ||||||||||||||||| |||||||||| ||||||| Sbjct: 37 accaggatgaagcttgggtgaaactaagtggaggtcc 1
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 603 bits (304), Expect = e-169 Identities = 325/330 (98%), Gaps = 2/330 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 161 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 220 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 221 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 280 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 340 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 400 Query: 246 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 460 Query: 306 agccggcgactcataggcagtggcttggtt 335 |||||||||||||||||||||||||||||| Sbjct: 461 agccggcgactcataggcagtggcttggtt 490
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 595 bits (300), Expect = e-167 Identities = 502/566 (88%), Gaps = 10/566 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||| | ||||||| ||| ||| ||||| |||||||||||||||| |||||| Sbjct: 343 agtccagtaatcaaaagcatatctaacttttgctccaacccgagtagcatgggacacgtg 402 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 403 aaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgat 462 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 463 agagaagaagtaccgcgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 522 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 523 atgaaatcgta---agctttcaagcagtgggaggagaattcaatctctgaccgcgtgcct 579 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 580 gttgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt-----caccg 634 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 635 gagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccg 693 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 ||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||| Sbjct: 694 ggtgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgac 753 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | || Sbjct: 754 tgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcgga 813 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||| Sbjct: 814 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 873 Query: 594 aaagcactgtttcggtgcgggctgcg 619 |||||||||||||||||||||||||| Sbjct: 874 aaagcactgtttcggtgcgggctgcg 899
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 591 bits (298), Expect = e-165 Identities = 334/346 (96%), Gaps = 5/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 47158 Score = 363 bits (183), Expect = 5e-97 Identities = 242/259 (93%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||| |||||||||| ||||| ||||||||||||||| Sbjct: 46548 gtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccagtagccgaa 46607 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46608 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 46667 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46668 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 46727 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | | Sbjct: 46728 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taa 46784 Query: 250 gctcccaagcagtgggagg 268 |||| |||||||||||||| Sbjct: 46785 gctctcaagcagtgggagg 46803
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 589 bits (297), Expect = e-165 Identities = 396/426 (92%), Gaps = 11/426 (2%) Strand = Plus / Plus Query: 188 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 247 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 248 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 307 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 308 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 367 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 368 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 427 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 428 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 487 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 488 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctct 349 Query: 548 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 607 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 409 Query: 608 gtgcgg 613 |||||| Sbjct: 410 gtgcgg 415
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 587 bits (296), Expect = e-164 Identities = 501/566 (88%), Gaps = 10/566 (1%) Strand = Plus / Minus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||| | ||||||| ||| ||| ||||| |||||||||||||||| |||||| Sbjct: 124922 agtccagtaatcaaaagcatatctaacttttgctccaacccgagtagcatgggacacgtg 124863 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 124862 aaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgat 124803 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 124802 agagaagaagtaccgcgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 124743 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 124742 atgaaatcgta---agctttcaagcagtgggaggagaattcaatctctgaccgcgtgcct 124686 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 124685 gttgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt-----caccg 124631 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 124630 gagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccg 124572 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 ||||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||| Sbjct: 124571 ggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgac 124512 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | || Sbjct: 124511 tgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcgga 124452 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||| Sbjct: 124451 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 124392 Query: 594 aaagcactgtttcggtgcgggctgcg 619 |||||||||||||||||||||||||| Sbjct: 124391 aaagcactgtttcggtgcgggctgcg 124366 Score = 587 bits (296), Expect = e-164 Identities = 501/566 (88%), Gaps = 10/566 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 ||||||||| | ||||||| ||| ||| ||||| |||||||||||||||| |||||| Sbjct: 94944 agtccagtaatcaaaagcatatctaacttttgctccaacccgagtagcatgggacacgtg 95003 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 95004 aaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgat 95063 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 95064 agagaagaagtaccgcgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 95123 Query: 235 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 294 ||||| ||| |||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 95124 atgaaatcgta---agctttcaagcagtgggaggagaattcaatctctgaccgcgtgcct 95180 Query: 295 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 354 |||||||||||||||||||||| |||||||||||| |||||||||||| ||||| Sbjct: 95181 gttgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt-----caccg 95235 Query: 355 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 414 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 95236 gagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccg 95294 Query: 415 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 474 ||||||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||| Sbjct: 95295 ggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgac 95354 Query: 475 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 534 |||||||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | || Sbjct: 95355 tgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcgga 95414 Query: 535 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 593 ||||||||||||||||||||||||||||||||||||| ||| | ||| | |||||||| Sbjct: 95415 gctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggt 95474 Query: 594 aaagcactgtttcggtgcgggctgcg 619 |||||||||||||||||||||||||| Sbjct: 95475 aaagcactgtttcggtgcgggctgcg 95500
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 583 bits (294), Expect = e-163 Identities = 333/346 (96%), Gaps = 5/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 386
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 575 bits (290), Expect = e-161 Identities = 332/346 (95%), Gaps = 5/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 402
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 567 bits (286), Expect = e-158 Identities = 377/404 (93%), Gaps = 10/404 (2%) Strand = Plus / Plus Query: 222 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 281 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 342 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 400 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 401 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 460 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 461 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 520 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 364980 Query: 521 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364981 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 365040 Query: 581 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 365041 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 365084 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 567 bits (286), Expect = e-158 Identities = 331/346 (95%), Gaps = 5/346 (1%) Strand = Plus / Minus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 129629 Score = 567 bits (286), Expect = e-158 Identities = 331/346 (95%), Gaps = 5/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 102827 Score = 363 bits (183), Expect = 5e-97 Identities = 242/259 (93%), Gaps = 5/259 (1%) Strand = Plus / Minus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 130239 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaa 130180 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130179 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 130120 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 130119 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccg 130060 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | | Sbjct: 130059 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taa 130003 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 130002 gctcccaagcagtgggagg 129984 Score = 363 bits (183), Expect = 5e-97 Identities = 242/259 (93%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 102217 gtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaa 102276 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102277 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 102336 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 102337 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccg 102396 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | | Sbjct: 102397 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taa 102453 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 102454 gctcccaagcagtgggagg 102472
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 559 bits (282), Expect = e-156 Identities = 330/346 (95%), Gaps = 5/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 921 Score = 339 bits (171), Expect = 7e-90 Identities = 239/259 (92%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 304 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 363 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 423 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 424 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccg 483 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| || ||||||||||||| |||||||| | | Sbjct: 484 tgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taa 540 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 541 gctcccaagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 551 bits (278), Expect = e-154 Identities = 330/346 (95%), Gaps = 6/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagc 177744 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacc 94 |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177371 aaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 167 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 545 bits (275), Expect = e-152 Identities = 473/534 (88%), Gaps = 10/534 (1%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 333 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 392 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 393 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 452 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 670 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 729 Query: 453 ctaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagggg 512 || || || |||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 730 ctcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagggg 789 Query: 513 tgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagca 572 |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 790 tgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcg 849 Query: 573 gttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 850 gttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagc 903
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 545 bits (275), Expect = e-152 Identities = 473/534 (88%), Gaps = 10/534 (1%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 333 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 392 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 393 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 452 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 114933 Query: 453 ctaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagggg 512 || || || |||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 114932 ctcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagggg 114873 Query: 513 tgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagca 572 |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 114872 tgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcg 114813 Query: 573 gttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 114812 gttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagc 114759 Score = 545 bits (275), Expect = e-152 Identities = 473/534 (88%), Gaps = 10/534 (1%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 333 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 392 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 393 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 452 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 87055 Query: 453 ctaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagggg 512 || || || |||||||||||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 87056 ctcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagggg 87115 Query: 513 tgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagca 572 |||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 87116 tgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcg 87175 Query: 573 gttgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||| | || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 87176 gttggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagc 87229
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 545 bits (275), Expect = e-152 Identities = 495/565 (87%), Gaps = 5/565 (0%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 4385 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 4444 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 | ||||| |||||||| || |||||||||| | |||||||||||||||||||| |||| Sbjct: 4445 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 4504 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 4505 atagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagaga 4564 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| || |||||||||||||| ||| |||| ||||||||||| Sbjct: 4565 acatgaaaccgtag---gccttcaagcagtgggaggagaattgtatctttgaccgcgtgc 4621 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct: 4622 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-ac 4680 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| Sbjct: 4681 cggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacc 4740 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| Sbjct: 4741 cgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccg 4800 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 || ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 4801 accgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcg 4860 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 591 |||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||| Sbjct: 4861 gagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggg 4920 Query: 592 gtaaagcactgtttcggtgcgggct 616 ||||||||||||||||||||||||| Sbjct: 4921 gtaaagcactgtttcggtgcgggct 4945
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 545 bits (275), Expect = e-152 Identities = 495/565 (87%), Gaps = 5/565 (0%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 352 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 411 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 | ||||| |||||||| || |||||||||| | |||||||||||||||||||| |||| Sbjct: 412 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 471 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 472 atagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagaga 531 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| || |||||||||||||| ||| |||| ||||||||||| Sbjct: 532 acatgaaaccgtag---gccttcaagcagtgggaggagaattgtatctttgaccgcgtgc 588 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct: 589 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-ac 647 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| Sbjct: 648 cggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacc 707 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| Sbjct: 708 cgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccg 767 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 || ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 768 accgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcg 827 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 591 |||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||| Sbjct: 828 gagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggg 887 Query: 592 gtaaagcactgtttcggtgcgggct 616 ||||||||||||||||||||||||| Sbjct: 888 gtaaagcactgtttcggtgcgggct 912
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 545 bits (275), Expect = e-152 Identities = 495/565 (87%), Gaps = 5/565 (0%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||| |||||||| ||| ||||| ||||| |||| ||||||||||| |||| Sbjct: 352 aaagtccagtagtcgaaagcaacacaagctttagctctaacccaagtagcatgggacacg 411 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 | ||||| |||||||| || |||||||||| | |||||||||||||||||||| |||| Sbjct: 412 ggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccg 471 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||| Sbjct: 472 atagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagaga 531 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || ||||||||| || |||||||||||||| ||| |||| ||||||||||| Sbjct: 532 acatgaaaccgtag---gccttcaagcagtgggaggagaattgtatctttgaccgcgtgc 588 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 352 |||||||||||||||||||||||||||||||||||||||||||||||||| | || || Sbjct: 589 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-ac 647 Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| Sbjct: 648 cggagccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacc 707 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 |||||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||| Sbjct: 708 cgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccg 767 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 || ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | Sbjct: 768 accgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcg 827 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggg 591 |||||||||||||||||||||||||||||||||||||||| || |||| || ||| |||| Sbjct: 828 gagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggg 887 Query: 592 gtaaagcactgtttcggtgcgggct 616 ||||||||||||||||||||||||| Sbjct: 888 gtaaagcactgtttcggtgcgggct 912
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 543 bits (274), Expect = e-151 Identities = 464/524 (88%), Gaps = 10/524 (1%) Strand = Plus / Plus Query: 97 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 156 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 157 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 216 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 217 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 276 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 277 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 336 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 337 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 396 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 397 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 456 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || Sbjct: 676 tttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaa 735 Query: 457 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 516 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 517 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 576 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 577 actggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 856 aatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 533 bits (269), Expect = e-148 Identities = 466/529 (88%), Gaps = 12/529 (2%) Strand = Plus / Plus Query: 92 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 151 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 152 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 211 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 271 ||| ||| ||||||||||||| ||||||||| ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccgta---agcctacaagcagtgggaggaga 513 Query: 272 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 331 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 332 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 391 ||||||| ||| || ||||||||||||||||| |||| || | || || ||| Sbjct: 574 ggttaagagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgt 625 Query: 392 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 451 ||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaa 685 Query: 452 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 511 | ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 686 gccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggg 745 Query: 512 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 805 Query: 572 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 |||| ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 806 gattgattggactacttaggggtaaagcactgtttcggtgcgggctgcg 854
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 529 bits (267), Expect = e-147 Identities = 329/347 (94%), Gaps = 7/347 (2%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 339 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 397 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 398 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 457 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 458 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 518 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 578 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||| |||||||||||||||||||||||||| ||| |||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagc 921 Score = 339 bits (171), Expect = 7e-90 Identities = 239/259 (92%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 304 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 363 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 423 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 424 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccg 483 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| | | Sbjct: 484 tgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taa 540 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 541 gctcccaagcagtgggagg 559
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 527 bits (266), Expect = e-146 Identities = 327/346 (94%), Gaps = 6/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 920 Score = 331 bits (167), Expect = 2e-87 Identities = 238/259 (91%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 304 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 363 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 423 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 424 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccg 483 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | | Sbjct: 484 tgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taa 540 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 541 gctcccaagcagtgggagg 559
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 525 bits (265), Expect = e-146 Identities = 327/346 (94%), Gaps = 5/346 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 921 Score = 331 bits (167), Expect = 2e-87 Identities = 238/259 (91%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 304 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 363 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 423 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 424 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccg 483 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| || ||||||||||||| |||||||| | | Sbjct: 484 tgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taa 540 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 541 gctcccaagcagtgggagg 559
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 525 bits (265), Expect = e-146 Identities = 470/535 (87%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 86 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 145 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 146 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 205 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 206 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 265 |||||||||| ||| ||||||| ||||| ||||||||| ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccgtag---gctttcaagcagtggg 556 Query: 266 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 325 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 326 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 385 ||||| ||||||||||| | | || |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaatttatgc-actggagccatagcgaaagcaagtcttttcagggc 675 Query: 386 gattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttg 445 |||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttg 735 Query: 446 gatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtgg 505 | |||||||||| ||||||| ||||||| ||||||||| |||| ||||||||| ||||| Sbjct: 736 ggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtgg 795 Query: 506 ttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgagg 565 |||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 796 ttagtggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgagg 855 Query: 566 cgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 ||||||| || ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 856 cgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgggctgcg 910
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 507 bits (256), Expect = e-140 Identities = 298/312 (95%), Gaps = 5/312 (1%) Strand = Plus / Plus Query: 313 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 372 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 373 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 432 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 433 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 492 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 493 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 553 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 613 ggctgcgcgagc 624 ||| ||| |||| Sbjct: 887 ggccgcgagagc 898 Score = 339 bits (171), Expect = 7e-90 Identities = 239/259 (92%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| |||||| |||||||| ||| | ||||||||||||||| Sbjct: 304 gtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaa 363 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 423 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 424 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccg 483 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| | | Sbjct: 484 tgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taa 540 Query: 250 gctcccaagcagtgggagg 268 ||||||||||||||||||| Sbjct: 541 gctcccaagcagtgggagg 559
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 502 bits (253), Expect = e-139 Identities = 274/281 (97%) Strand = Plus / Plus Query: 344 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 403 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 404 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 463 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 464 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 524 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 584 atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||||||||| ||| |||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagc 882 Score = 317 bits (160), Expect = 2e-83 Identities = 208/222 (93%), Gaps = 4/222 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 347 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 406 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 466 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||| | Sbjct: 467 atagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaa 525 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 274 || |||||||| | ||||| |||||||||||||| ||||| Sbjct: 526 acatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 498 bits (251), Expect = e-137 Identities = 488/561 (86%), Gaps = 12/561 (2%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgt 113 |||||||||| |||| |||| ||||||||||| | | ||||||||||||||| || | Sbjct: 334 agtccagtagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatat 393 Query: 114 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 173 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 394 ggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaa 453 Query: 174 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 233 ||| |||||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| Sbjct: 454 tagtgaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaa 513 Query: 234 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 293 | ||||| | | ||| ||||||||||||||| || || | |||||||| |||||| Sbjct: 514 catgaaaacatat---gctaccaagcagtgggaggagacaggg--ctctgaccacgtgcc 568 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||| |||||||||||| | |||||| ||||||||| |||| ||||| Sbjct: 569 cgttgaagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccacc 623 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| | Sbjct: 624 ggagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaactt 683 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| |||||||||||||| | |||| | |||||||| | |||| ||||||| Sbjct: 684 gggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccga 743 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 744 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaa 803 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 593 ||||||||||||| ||||||||||| || ||||||||||||| || || ||||||||||| Sbjct: 804 agctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctaggggt 862 Query: 594 aaagcactgtttcggtgcggg 614 |||||| ||||| |||||||| Sbjct: 863 aaagcattgttttggtgcggg 883
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 494 bits (249), Expect = e-136 Identities = 357/391 (91%), Gaps = 9/391 (2%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactag-cttatgctctgacccgagtagcatggggcacgt 113 |||||||||||||||||||| || | || ||||||| |||||||||||||||||||||| Sbjct: 2385 agtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgt 2444 Query: 114 ggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccga 173 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2445 ggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccga 2504 Query: 174 tagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaa 233 ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 2505 tagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaa 2564 Query: 234 cgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcc 293 | |||||||| | |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 2565 catgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcc 2621 Query: 294 tgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccacc 353 ||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||| Sbjct: 2622 tgttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaacccacc 2676 Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| Sbjct: 2677 ggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacct 2736 Query: 414 gggtgatctatccatgaccaggatgaagctt 444 |||||||||| |||||||||||||||||||| Sbjct: 2737 gggtgatctaaccatgaccaggatgaagctt 2767
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 478 bits (241), Expect = e-131 Identities = 458/529 (86%), Gaps = 11/529 (2%) Strand = Plus / Plus Query: 92 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 151 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 152 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 211 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 271 |||| ||| ||||||||||| ||||||||| |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccgta---agcttacaagcagtgggagaaga 960 Query: 272 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 331 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 332 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 391 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 392 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 451 ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaa 1133 Query: 452 actaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 511 | ||| |||| |||||||||||| ||||||| || ||||||||||| ||||||||||| Sbjct: 1134 gccaagtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggg 1193 Query: 512 gtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 gtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 1253 Query: 572 agttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 |||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 1254 gattgactaaactgtttaggggtaaagcactgtttcggtgcgggctgcg 1302
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 456 bits (230), Expect = e-125 Identities = 293/310 (94%), Gaps = 8/310 (2%) Strand = Plus / Plus Query: 319 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 377 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 378 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 435 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 436 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 495 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 496 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct-ccccgaa 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 555 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 615 ctgcgcgagc 624 | ||| |||| Sbjct: 909 ccgcgagagc 918 Score = 248 bits (125), Expect = 2e-62 Identities = 153/160 (95%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 338 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 397 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 398 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgat 455 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 214 || |||||||||||||||||||| |||| ||||||||||| Sbjct: 456 agtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 440 bits (222), Expect = e-120 Identities = 458/530 (86%), Gaps = 15/530 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 211 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 271 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| | Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg--a 529 Query: 272 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 331 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 332 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--tt 389 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| | | Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 390 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 449 |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 646 gtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 705 Query: 450 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 509 |||| ||| ||||||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 706 aaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 765 Query: 510 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 569 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 766 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 825 Query: 570 gcagtt---gactggacatctaggggtaaagcactgtttcggtgcgggct 616 || ||| ||| || |||||||||||||||||||||||||||||||| Sbjct: 826 gcggttggcgacgggctgtctaggggtaaagcactgtttcggtgcgggct 875
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 434 bits (219), Expect = e-118 Identities = 269/284 (94%), Gaps = 5/284 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 278 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 338 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 339 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 398 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || |||||||| | |||||||||||||||||||| | || | |||||||||||||| Sbjct: 399 acatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 453 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttggtta 336 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 ctgttgaagaatgagccggcgactcataggcagtggcttggtta 497
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 426 bits (215), Expect = e-116 Identities = 310/339 (91%), Gaps = 7/339 (2%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 581 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 582 ac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 | || ||||||||||||||||||||||||||||||||| Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 97 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 156 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 157 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 216 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 217 tgggtagtgaaatagaacgtgaaacc 242 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 426 bits (215), Expect = e-116 Identities = 310/339 (91%), Gaps = 7/339 (2%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 581 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 582 ac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 | || ||||||||||||||||||||||||||||||||| Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcg 3933 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 97 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 156 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 157 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 216 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 217 tgggtagtgaaatagaacgtgaaacc 242 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 420 bits (212), Expect = e-114 Identities = 265/281 (94%), Gaps = 5/281 (1%) Strand = Plus / Minus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 217 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 216 tggaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccg 157 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 156 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 97 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || |||||||| | |||||||||||||||||||| | || | |||||||||||||| Sbjct: 96 acatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgc 42 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttgg 333 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 ctgttgaagaatgagccggcgactcataggcagtggcttgg 1
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 337 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 338 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 397 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 398 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 457 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 458 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 518 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 561 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 579 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagc 362
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 233 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 292 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 293 ctgttgaagaatgagccggcgactcataggcagtggcttg 332 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 394 bits (199), Expect = e-106 Identities = 220/225 (97%), Gaps = 2/225 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 292 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 351 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 352 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 411 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 471 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 387 bits (195), Expect = e-104 Identities = 216/221 (97%), Gaps = 2/221 (0%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 206 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 265 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 266 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 325 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 385 Query: 186 accgtgagggaaaggtgaaaagaacccccagtgggtagtga 226 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 accgtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 379 bits (191), Expect = e-102 Identities = 302/336 (89%), Gaps = 6/336 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 579 tggacatctaggggtaaagcactgtttcggtgcggg 614 ||||||||||||||||||||||||||||| |||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcggg 895 Score = 226 bits (114), Expect = 7e-56 Identities = 168/186 (90%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||| ||||||||||||| |||||| Sbjct: 347 agtccagtagtataaagtatcattagcttatgctttgactcgagtagcatgggacacgtg 406 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || Sbjct: 407 gaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatactcttgggtgaccaat 466 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| ||||||||||||| | | |||| ||||||||||||| Sbjct: 467 agtgaagtagtaccgtgagggaagggtgaaaagaacctctactggggagtgaaatagaac 526 Query: 235 gtgaaa 240 ||||| Sbjct: 527 atgaaa 532
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 345 bits (174), Expect = 1e-91 Identities = 308/349 (88%), Gaps = 9/349 (2%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 340 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 341 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 398 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 577 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 578 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 || | ||||||||||||||||||||||||||||||||||| |||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagc 973 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 211 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 345 bits (174), Expect = 1e-91 Identities = 405/478 (84%), Gaps = 13/478 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 333 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 389 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 390 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 449 |||||| |||||||||||||||| || ||||||||||||| |||| |||||| | | | Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatccatggccagattgaagcgttggta 720 Query: 450 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 509 ||||| | ||| ||||||||| ||||||||| |||| ||||||||||||||| ||| Sbjct: 721 aaacttcgtgaaggatcgaaccgaccgatgttgaaaaatcggcggatgagttgtggatag 780 Query: 510 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 567 || ||||| || ||||| || ||||||||||| |||| ||||||| ||||||||| Sbjct: 781 cggagaaattcctatcgaatcccgagctagctggatctctccgaaatttgttgaggcg 838 Score = 40.1 bits (20), Expect = 8.5 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 589 ggggtaaagc-actgtttcggtgcgggctgcg 619 |||||||||| || |||||||||||||||||| Sbjct: 862 ggggtaaagctaccgtttcggtgcgggctgcg 893
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 341 bits (172), Expect = 2e-90 Identities = 270/298 (90%), Gaps = 8/298 (2%) Strand = Plus / Plus Query: 12 gtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagccgaa 69 ||||||||||||||| |||| ||||||| |||||| ||| | ||||||||||||||| Sbjct: 345 gtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaa 404 Query: 70 agcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 129 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 agcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaat 464 Query: 130 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 cagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccg 524 Query: 190 tgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctga 249 |||||||| |||||||||||||||| ||| ||||||||||||| |||||||| | | Sbjct: 525 tgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taa 581 Query: 250 gctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 306 |||||||||||| |||||| | || | |||||||||||||||||||||||||||| Sbjct: 582 gctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 333 bits (168), Expect = 4e-88 Identities = 186/192 (96%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 84 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 85 tggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaatactcctgggtgaccg 144 Query: 173 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 232 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 145 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 204 Query: 233 acgtgaaaccgt 244 || ||||||||| Sbjct: 205 acatgaaaccgt 216
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 187 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 246 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 247 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 306 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 307 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 1e-82 Identities = 174/179 (97%) Strand = Plus / Plus Query: 344 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 403 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 404 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 463 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 464 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 522 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 315 bits (159), Expect = 1e-82 Identities = 442/528 (83%), Gaps = 10/528 (1%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||| ||||| |||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 2197 taaatattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccc 2256 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 | | ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 2257 cgggaggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggacga 2313 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 | | ||||||| ||||| ||||||||||||||||||||||| || |||||||| | Sbjct: 2314 cttaacgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-g 2372 Query: 333 gttaagg-gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattg 390 ||||||| | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | | Sbjct: 2373 gttaaggcgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcg 2429 Query: 391 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 450 |||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | Sbjct: 2430 tcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaa 2489 Query: 451 aactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttagg 510 |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 2490 cactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattagg 2549 Query: 511 ggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcag 570 |||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||| Sbjct: 2550 ggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcag 2609 Query: 571 cagttgactggacatc-taggggtaaagcactgtttcggtgcgggctg 617 | ||||| | | | ||||||||||||||||||||||| ||||||| Sbjct: 2610 cggttgatgctatagcttaggggtaaagcactgtttcggtacgggctg 2657
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 305 bits (154), Expect = 9e-80 Identities = 250/279 (89%), Gaps = 6/279 (2%) Strand = Plus / Plus Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 409 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 410 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 469 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 470 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 529 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 530 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 585 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 586 ctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||||||||||||||||||||||||||||||| |||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagc 910 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 211 |||||||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||| Sbjct: 437 taaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacc 496 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 || ||| ||||||| ||||| ||||||||| Sbjct: 497 cctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 301 bits (152), Expect = 1e-78 Identities = 299/345 (86%), Gaps = 6/345 (1%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 580 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 581 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 | | ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagc 1054 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 213 ccagt-gggtagtgaaatagaacgtgaaaccgt 244 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 293 bits (148), Expect = 4e-76 Identities = 239/268 (89%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 351 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 410 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 411 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 470 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 471 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 530 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 531 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 589 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 590 gggtaaagcactgtttcggtgcgggctg 617 |||||||||||||||||||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctg 859 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 87 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 146 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 147 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 206 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 207 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 266 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 267 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 326 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 327 ggcttggttaagg 339 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 285 bits (144), Expect = 9e-74 Identities = 190/204 (93%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 52 taaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatggggca 110 |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| | Sbjct: 95258 taaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatgggaaa 95317 Query: 111 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 170 |||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 95318 cgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgggtgac 95377 Query: 171 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95378 cgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtgaaata 95437 Query: 231 gaacgtgaaaccgtgctgagctcc 254 |||||||||||||||||||||||| Sbjct: 95438 gaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 285 bits (144), Expect = 9e-74 Identities = 190/204 (93%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 52 taaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatggggca 110 |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| | Sbjct: 931 taaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatgggaaa 872 Query: 111 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 170 |||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 871 cgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgggtgac 812 Query: 171 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 811 cgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtgaaata 752 Query: 231 gaacgtgaaaccgtgctgagctcc 254 |||||||||||||||||||||||| Sbjct: 751 gaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 285 bits (144), Expect = 9e-74 Identities = 190/204 (93%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 52 taaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatggggca 110 |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| | Sbjct: 11893531 taaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatgggaaa 11893590 Query: 111 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 170 |||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 11893591 cgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgggtgac 11893650 Query: 171 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11893651 cgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtgaaata 11893710 Query: 231 gaacgtgaaaccgtgctgagctcc 254 |||||||||||||||||||||||| Sbjct: 11893711 gaacgtgaaaccgtgctgagctcc 11893734 Score = 54.0 bits (27), Expect = 6e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 302 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 361 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 419 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9056697 Query: 420 tctatccatgaccaggat 437 | |||||||||| ||||| Sbjct: 9056698 tttatccatgactaggat 9056715 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 tgagctcccaagcagtgggaggggaaagtgatc 279 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 285 bits (144), Expect = 9e-74 Identities = 165/170 (97%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 8 cgttgtgctgctaggcgaa-cggttgagtgccgcaccctann-ggctaaagtccagtagc 65 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 197 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 256 Query: 66 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 125 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 316 Query: 126 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 175 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 366
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 285 bits (144), Expect = 9e-74 Identities = 190/204 (93%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 52 taaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcatggggca 110 |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||||| | Sbjct: 11971938 taaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcatgggaaa 11971997 Query: 111 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 170 |||||||||| ||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 11971998 cgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctgggtgac 11972057 Query: 171 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 230 ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11972058 cgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagtgaaata 11972117 Query: 231 gaacgtgaaaccgtgctgagctcc 254 |||||||||||||||||||||||| Sbjct: 11972118 gaacgtgaaaccgtgctgagctcc 11972141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 302 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 361 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 419 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9128394 Query: 420 tctatccatgaccaggat 437 | |||||||||| ||||| Sbjct: 9128395 tttatccatgactaggat 9128412 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 247 tgagctcccaagcagtgggaggggaaagtgatc 279 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 281 bits (142), Expect = 1e-72 Identities = 148/150 (98%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 318 agtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtg 377 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 437 Query: 175 agcgaagtagtaccgtgagggaaaggtgaa 204 ||||||||||||||||||||||| |||||| Sbjct: 438 agcgaagtagtaccgtgagggaagggtgaa 467
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 280 bits (141), Expect = 5e-72 Identities = 294/341 (86%), Gaps = 8/341 (2%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 579 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 580 ggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 || | || ||||||||||||||||||||||||||||||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcg 192764 Score = 280 bits (141), Expect = 5e-72 Identities = 294/341 (86%), Gaps = 8/341 (2%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 579 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 580 ggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 || | || ||||||||||||||||||||||||||||||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcg 144018 Score = 170 bits (86), Expect = 4e-39 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 192250 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 192309 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 192310 taaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-c 192368 Query: 212 cccagt-gggtagtgaaatagaacgtgaaaccgt 244 |||||| ||| ||||||||||||| ||||||||| Sbjct: 192369 cccagtcggggagtgaaatagaacatgaaaccgt 192402 Score = 170 bits (86), Expect = 4e-39 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 144532 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 144473 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 144472 taaatactcctgaatgaccgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-c 144414 Query: 212 cccagt-gggtagtgaaatagaacgtgaaaccgt 244 |||||| ||| ||||||||||||| ||||||||| Sbjct: 144413 cccagtcggggagtgaaatagaacatgaaaccgt 144380
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 6228 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 6169 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||| | ||||||| |||||||||||||||||||||| Sbjct: 6168 taagtactactgtgtgaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaaccc 6109 Query: 213 ccagtgggtagtgaaatagaacgtgaaacc 242 | | ||| ||||||||||||| ||||||| Sbjct: 6108 cgggaggggagtgaaatagaacatgaaacc 6079 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 139 bits (70), Expect = 1e-29 Identities = 130/150 (86%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 211544 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 211603 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||| | ||||||| |||||||||||||||||||||| Sbjct: 211604 taagtactactgtgtgaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaaccc 211663 Query: 213 ccagtgggtagtgaaatagaacgtgaaacc 242 | | ||| ||||||||||||| ||||||| Sbjct: 211664 cgggaggggagtgaaatagaacatgaaacc 211693 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 333 gttaagg 339 ||||||| Sbjct: 644 gttaagg 650 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Plus Query: 466 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 525 ||||| ||| ||||||||| |||| || |||||| |||| ||| || ||||| ||| || Sbjct: 1427 cgaacggaccgatgttgaaaaatcggccgatgagctgtgtctagcggagaaattccaatc 1486 Query: 526 gaacccagagctagctggttctccccgaaatgcgttgaggcg 567 ||| | ||||||||||| |||| ||||||| ||||||||| Sbjct: 1487 gaattccgagctagctggatctctccgaaatttgttgaggcg 1528 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 390 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 442 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 274 bits (138), Expect = 3e-70 Identities = 217/241 (90%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 387 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 446 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 447 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 506 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 507 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 566 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 567 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 623 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 624 c 624 | Sbjct: 1040 c 1040 Score = 168 bits (85), Expect = 1e-38 Identities = 137/153 (89%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 490 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 549 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 211 |||||||| ||| |||||||||| ||| ||||||||||||||||||||| ||||||||| Sbjct: 550 taaatacttttggatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaaagaacc 609 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 || ||| ||||||||||||| ||||||||| Sbjct: 610 cctgtaggggagtgaaatagaacatgaaaccgt 642 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtgaaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 270 bits (136), Expect = 5e-69 Identities = 173/184 (94%), Gaps = 1/184 (0%) Strand = Plus / Minus Query: 432 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 491 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 492 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 551 |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactc-aaaccagagctagctggttctccct 2993 Query: 552 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 611 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 612 gggc 615 |||| Sbjct: 2932 gggc 2929 Score = 157 bits (79), Expect = 5e-35 Identities = 88/91 (96%) Strand = Plus / Minus Query: 60 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 119 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3468 agtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatc 3409 Query: 120 ccgtgtgaatcagcaaggaccaccttgcaag 150 |||||||||| |||||||||||||||||||| Sbjct: 3408 ccgtgtgaattagcaaggaccaccttgcaag 3378 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 399 tatggacccgaacct 413 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 159 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 218 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 219 ggtagtgaaatagaacgtgaaacc 242 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 567 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 168 bits (85), Expect = 1e-38 Identities = 136/153 (88%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2590 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2649 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 2650 taagtactcctgtgtgaccgatagtgaagcagtaccgcgagggaaaggtgaaaagaaccc 2709 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 2710 cgggaggggagtgaaatagaacatgaaaccgtg 2742 Score = 42.1 bits (21), Expect = 2.2 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 589 ggggtaaagc-actgtttcggtgcgggctgcgcgagc 624 |||||||||| ||||||||||| ||||||||| |||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagc 3115
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||| || || ||||||||||| ||||||||||| | |||||||||| | ||||| Sbjct: 355848 cccgagtaacacggagcacgtggaattccgtgtgaatctacgaggaccacctcgtaaggc 355907 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 355908 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 355967 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 355968 cgggaggggagtgaaatagaacatgaaaccgtg 356000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 264 bits (133), Expect = 3e-67 Identities = 292/341 (85%), Gaps = 8/341 (2%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 341 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 342 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 401 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 402 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 461 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 462 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 521 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 522 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 579 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 580 ggac-atctaggggtaaagcactgtttcggtgcgggctgcg 619 || | | ||||||||||||||||||||||||||||||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcg 933 Score = 170 bits (86), Expect = 4e-39 Identities = 140/154 (90%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 419 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 478 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| | Sbjct: 479 taaatactcctgaatgaccgatagcgaaatagtaccgtgagggaaaggtgaaacagaa-c 537 Query: 212 cccagt-gggtagtgaaatagaacgtgaaaccgt 244 |||||| ||| ||||||| ||||| ||||||||| Sbjct: 538 cccagtcggggagtgaaaaagaacatgaaaccgt 571
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 264 bits (133), Expect = 3e-67 Identities = 286/332 (86%), Gaps = 5/332 (1%) Strand = Plus / Plus Query: 287 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 346 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 347 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 405 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 406 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 465 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 466 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 525 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 526 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 584 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 585 tctaggggtaaagcactgtttcggtgcgggct 616 | |||||||||||||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggct 2713 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 97 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 156 |||||||||||||||||| |||||||||||||||||| |||||||||| | ||||||||| Sbjct: 2196 agtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaa 2255 Query: 157 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 206 || ||||| |||||||||||| | |||||||||||||||||||||||| Sbjct: 2256 tattcctgaatgaccgatagcgtaacagtaccgtgagggaaaggtgaaaa 2305
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 262 bits (132), Expect = 1e-66 Identities = 297/347 (85%), Gaps = 5/347 (1%) Strand = Plus / Minus Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 340 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 398 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 579 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagc 624 | | | ||||||||||||||||||||||||||||||||| |||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagc 114527 Score = 262 bits (132), Expect = 1e-66 Identities = 297/347 (85%), Gaps = 5/347 (1%) Strand = Plus / Plus Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 340 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 398 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 579 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagc 624 | | | ||||||||||||||||||||||||||||||||| |||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagc 2990 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 115053 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 114994 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 114993 taaatattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccc 114934 Query: 213 ccagt-gggtagtgaaatagaacgtgaaaccgt 244 | | ||| |||||||||||| ||||||||| Sbjct: 114933 cgggcaggggagtgaaatagaatatgaaaccgt 114901 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 2464 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 2523 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 2524 taaatattcctgaatgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccc 2583 Query: 213 ccagt-gggtagtgaaatagaacgtgaaaccgt 244 | | ||| |||||||||||| ||||||||| Sbjct: 2584 cgggcaggggagtgaaatagaatatgaaaccgt 2616
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 2138411 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 2138352 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 2138351 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 2138292 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 2138291 cgggaggggagtgaaatagaacatgaaaccgtg 2138259 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 476449 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 476508 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 476509 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 476568 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 476569 cgggaggggagtgaaatagaacatgaaaccgtg 476601 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 340 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 399 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 400 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 459 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 460 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 519 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 520 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 147 bits (74), Expect = 5e-32 Identities = 129/146 (88%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 97 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 156 |||||||||| ||||||| ||| |||||||||||||| |||||||||| | ||||||||| Sbjct: 2123 agtagcatggagcacgtgaaattccgtgtgaatcagcgaggaccacctcgtaaggctaaa 2182 Query: 157 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 216 || ||||| |||||||||| ||| |||||||||||||||||||||||||||||||| | Sbjct: 2183 tattcctgaatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccggg 2242 Query: 217 tgggtagtgaaatagaacgtgaaacc 242 ||| ||||||| ||||| ||||||| Sbjct: 2243 aggggagtgaaa-agaacatgaaacc 2267
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 339662 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 339603 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 339602 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 339543 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 339542 cgggaggggagtgaaatagaacatgaaaccgtg 339510 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 132722 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 132663 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 132662 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 132603 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 132602 cgggaggggagtgaaatagaacatgaaaccgtg 132570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 256 bits (129), Expect = 8e-65 Identities = 144/149 (96%) Strand = Plus / Minus Query: 460 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 519 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 520 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 579 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 580 ggacatctaggggtaaagcactgtttcgg 608 |||||| ||||||||||||| |||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcgg 141761
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgc 867 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 235 gtgaaa 240 ||||| Sbjct: 503 atgaaa 508
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 254 bits (128), Expect = 3e-64 Identities = 284/333 (85%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 254 bits (128), Expect = 3e-64 Identities = 201/223 (90%), Gaps = 3/223 (1%) Strand = Plus / Plus Query: 398 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 457 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 458 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 517 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 518 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 577 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 578 c--tggacatct-aggggtaaagcactgtttcggtgcgggctg 617 | ||| | | | |||||||||||||||||||| ||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctg 909 Score = 159 bits (80), Expect = 1e-35 Identities = 135/152 (88%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 94 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 153 ||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||| Sbjct: 382 ccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggct 441 Query: 154 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaaccc 212 ||||||||||| || |||||||| |||||||||||| |||||||||||| |||||||||| Sbjct: 442 aaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaaccc 501 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgt 244 | ||| ||||||| ||||| ||||||||| Sbjct: 502 ctgtaggggagtgaaaaagaacatgaaaccgt 533 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 254 bits (128), Expect = 3e-64 Identities = 230/262 (87%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 420 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 421 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 480 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 481 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 540 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 541 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 597 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 598 cactgtttcggtgcgggctgcg 619 |||||||||||||||||||||| Sbjct: 860 cactgtttcggtgcgggctgcg 881 Score = 168 bits (85), Expect = 1e-38 Identities = 137/153 (89%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 358 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 417 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 211 |||||||||||| || |||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 418 taaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacc 477 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 || ||| ||||||||||||| ||||||||| Sbjct: 478 cctgcaggggagtgaaatagaacatgaaaccgt 510 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 322 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 254 bits (128), Expect = 3e-64 Identities = 211/238 (88%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 390 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 449 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 450 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 509 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 510 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 569 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 570 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 || || ||| || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagc 917 Score = 163 bits (82), Expect = 9e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 387 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 446 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 206 |||||||| ||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 447 taaatacttttggatgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 500 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 337 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 254 bits (128), Expect = 3e-64 Identities = 201/223 (90%), Gaps = 3/223 (1%) Strand = Plus / Plus Query: 398 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 457 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 458 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 517 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 518 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 577 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 578 c--tggacatct-aggggtaaagcactgtttcggtgcgggctg 617 | ||| | | | |||||||||||||||||||| ||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctg 2647 Score = 161 bits (81), Expect = 3e-36 Identities = 136/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 2119 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 2178 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 211 |||||||||||| || |||||||| |||||||||||| |||||||||||| ||||||||| Sbjct: 2179 taaatactcctgagtcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacc 2238 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 || ||| ||||||| ||||| ||||||||| Sbjct: 2239 cctgtaggggagtgaaaaagaacatgaaaccgt 2271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 252 bits (127), Expect = 1e-63 Identities = 234/269 (86%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 411 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 412 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 471 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 472 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 531 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 532 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 588 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 589 ggggtaaagcactgtttcggtgcgggctg 617 ||||||||||||||||||||||||||||| Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctg 137386 Score = 252 bits (127), Expect = 1e-63 Identities = 234/269 (86%), Gaps = 3/269 (1%) Strand = Plus / Minus Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 411 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 412 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 471 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 472 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 531 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 532 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 588 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 589 ggggtaaagcactgtttcggtgcgggctg 617 ||||||||||||||||||||||||||||| Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctg 48158 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 212 cccagt-gggtagtgaaatagaacgtgaaacc 242 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 212 cccagt-gggtagtgaaatagaacgtgaaacc 242 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 542 ggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 121 bits (61), Expect = 3e-24 Identities = 141/167 (84%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 148 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 207 ||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 53 aaggctaaatactcctgtgtgaccgatagagaaccagtaccgcgagggaaaggtgaaaag 112 Query: 208 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 267 |||||| | ||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct: 113 aaccccgggaggggagtgaaatagaacctgaaaccgtt---agcttacaagcagtgggag 169 Query: 268 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 314 | | | |||||||||||||||||||||| |||||||||||| Sbjct: 170 gacgattaaacgtctgaccgcgtgcctgttgaagcatgagccggcga 216 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||| |||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagc 523
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 542 ggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 96 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 155 |||||||| ||||| |||| ||||||||||||||| || ||||||| || | |||||||| Sbjct: 1 gagtagcacggggcccgtgaaatcccgtgtgaatctgcgaggaccatctcgtaaggctaa 60 Query: 156 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 215 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| | Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 216 gtgggtagtgaaatagaacgtgaaaccgt 244 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacctgaaaccgt 149 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||| |||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagc 523 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 322 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 322 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 322 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 248 bits (125), Expect = 2e-62 Identities = 196/217 (90%), Gaps = 2/217 (0%) Strand = Plus / Plus Query: 403 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 462 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 463 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 522 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 523 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 581 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 582 ac-atctaggggtaaagcactgtttcggtgcgggctg 617 | |||||||||||||||||||||||||||||||||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctg 6591 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 109 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 168 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 6067 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 6126 Query: 169 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 6127 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 6171 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgact 316 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 agccgtagcgaaagcgagtcttaatagggcgat 388 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 248 bits (125), Expect = 2e-62 Identities = 196/217 (90%), Gaps = 2/217 (0%) Strand = Plus / Plus Query: 403 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 462 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 463 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 522 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 523 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 581 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 582 ac-atctaggggtaaagcactgtttcggtgcgggctg 617 | |||||||||||||||||||||||||||||||||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctg 3654 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 109 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 168 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 3130 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 3189 Query: 169 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 3190 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 3234 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgact 316 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 agccgtagcgaaagcgagtcttaatagggcgat 388 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 351 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 410 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 411 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 470 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 471 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 530 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 531 cagagctagctggttctccccgaaatgcgttgaggcgcagc 571 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgt 244 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 584 atctaggggtaaagcactgtttcggtgcgggctgcg 619 |||||||||||||||||||| ||||||||||||||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcg 894
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 248 bits (125), Expect = 2e-62 Identities = 196/217 (90%), Gaps = 2/217 (0%) Strand = Plus / Plus Query: 403 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 462 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 463 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 522 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 523 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 581 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 582 ac-atctaggggtaaagcactgtttcggtgcgggctg 617 | |||||||||||||||||||||||||||||||||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctg 942 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 109 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 168 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 418 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 477 Query: 169 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 213 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 478 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 522 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgact 316 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 356 agccgtagcgaaagcgagtcttaatagggcgat 388 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 248 bits (125), Expect = 2e-62 Identities = 233/267 (87%), Gaps = 4/267 (1%) Strand = Plus / Plus Query: 356 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 415 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 416 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 475 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 476 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 535 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 536 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 593 taaagcactgtttcggtgcgggctgcg 619 |||||| |||||||||||||||||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcg 901 Score = 137 bits (69), Expect = 5e-29 Identities = 133/153 (86%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||| |||| |||||| ||||||| |||||||||| |||||||||| | ||||| Sbjct: 369 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 428 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 ||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| |||||| Sbjct: 429 taaatactcctaagtgaccgatagtgaacaagtaccgcgagggaaaggtgaaatagaacc 488 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 || ||| ||||||||||||| ||||||||| Sbjct: 489 cctgaaggggagtgaaatagaacatgaaaccgt 521 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 337 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 248 bits (125), Expect = 2e-62 Identities = 233/267 (87%), Gaps = 4/267 (1%) Strand = Plus / Plus Query: 356 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 415 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 416 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 475 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 476 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 535 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 536 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 592 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 593 taaagcactgtttcggtgcgggctgcg 619 |||||| |||||||||||||||||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcg 2783 Score = 137 bits (69), Expect = 5e-29 Identities = 133/153 (86%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||| |||| |||||| ||||||| |||||||||| |||||||||| | ||||| Sbjct: 2250 cccgagtagcctgggacacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggc 2309 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 211 ||||||||||| ||||||||||| ||| ||||||| ||||||||||||||| |||||| Sbjct: 2310 taaatactcctaagtgaccgatagtgaacaagtaccgcgagggaaaggtgaaatagaacc 2369 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgt 244 || ||| ||||||||||||| ||||||||| Sbjct: 2370 cctgaaggggagtgaaatagaacatgaaaccgt 2402 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 337 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 246 bits (124), Expect = 7e-62 Identities = 283/333 (84%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgc 867 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 235 gtgaaa 240 ||||| Sbjct: 503 atgaaa 508
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 246 bits (124), Expect = 7e-62 Identities = 284/333 (85%), Gaps = 7/333 (2%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgc 867 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 246 bits (124), Expect = 7e-62 Identities = 283/333 (84%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 542 ggttctccccgaaatgcgttgaggcgcagcagttg 576 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 96 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 155 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 156 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 215 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 216 gtgggtagtgaaatagaacgtgaaaccgt 244 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcga 314 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 589 ggggtaaagcactgtttcggtgcgggctgc 618 |||||||||||||||||||||||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgc 519
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 244 bits (123), Expect = 3e-61 Identities = 231/267 (86%) Strand = Plus / Plus Query: 353 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 412 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 413 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 472 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 473 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 532 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 533 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 592 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 593 taaagcactgtttcggtgcgggctgcg 619 ||||||||||||||||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcg 2455 Score = 131 bits (66), Expect = 3e-27 Identities = 129/150 (86%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||| ||||| |||||| || ||||| ||||||||| |||||||||| | ||||| Sbjct: 1937 cccgagtaatatgggacacgtgaaaccccgtatgaatcagcgaggaccacctcgtaaggc 1996 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||| |||| | | |||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 1997 taaatattcctagataaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2056 Query: 213 ccagtgggtagtgaaatagaacgtgaaacc 242 | | ||| ||||||||||||| ||||||| Sbjct: 2057 cgtgaggggagtgaaatagaacatgaaacc 2086 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 280 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 319972 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 320031 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 320032 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 320091 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 320092 cgggaggggagtgaaatagaacatgaaaccgtg 320124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 1776108 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 1776049 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1776048 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 1775989 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 1775988 cgggaggggagtgaaatagaacatgaaaccgtg 1775956 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 375961 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 376020 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 376021 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 376080 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 376081 cgggaggggagtgaaatagaacatgaaaccgtg 376113 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 139 bits (70), Expect = 1e-29 Identities = 134/154 (87%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2394 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2453 Query: 153 taaatac-tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 211 ||| ||| | ||| ||||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 2454 taagtacctactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaacc 2513 Query: 212 cccagtgggtagtgaaatagaacgtgaaaccgtg 245 || | ||| ||||||||||||| |||||||||| Sbjct: 2514 ccgggaggggagtgaaatagaacatgaaaccgtg 2547 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2396 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2455 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 2456 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 2515 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 2516 cgggaggggagtgaaatagaacatgaaaccgtg 2548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 2623 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 2682 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 2683 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 2742 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 2743 cgggaggggagtgaaatagaacatgaaaccgtg 2775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 242 bits (122), Expect = 1e-60 Identities = 237/274 (86%), Gaps = 1/274 (0%) Strand = Plus / Plus Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 411 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 412 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 471 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 472 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 531 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 532 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 590 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 591 ggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||| |||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagc 522 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 96 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 155 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 156 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 215 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 216 gtgggtagtgaaatagaacgtgaaaccgt 244 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 289 gtgcctgttgaagaatgagccggcgactcatagg 322 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 20485 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 20426 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 20425 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 20366 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 20365 cgggaggggagtgaaatagaacatgaaaccgtg 20333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 2239 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 2180 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 2179 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 2120 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 2119 cgggaggggagtgaaatagaacatgaaaccgtg 2087 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||||||| ||||||||||| || |||||||||| | ||||| Sbjct: 315461 cccgagtagcacggagcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggc 315520 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 315521 taagtactactgtgtgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccc 315580 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 315581 cgggaggggagtgaaatagaacatgaaaccgtg 315613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 1658875 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 1658934 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1658935 taaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccc 1658994 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | ||| ||||||||||||| |||||||||| Sbjct: 1658995 cggaaggggagtgaaatagaacatgaaaccgtg 1659027 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 1049869 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 1049810 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1049809 taaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccc 1049750 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | ||| ||||||||||||| |||||||||| Sbjct: 1049749 cggaaggggagtgaaatagaacatgaaaccgtg 1049717 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||| ||||||| |||||||||||||||| |||| Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagc 1659399 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||| ||||||| |||||||||||||||| |||| Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagc 1049345
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 233 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 292 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 293 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 352 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 353 cgggaggggagtgaaatagaacatgaaaccgtg 385 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 332 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 333 gttaagg 339 ||||||| Sbjct: 611 gttaagg 617 Score = 238 bits (120), Expect = 2e-59 Identities = 241/280 (86%), Gaps = 6/280 (2%) Strand = Plus / Plus Query: 351 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 410 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 411 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 470 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 471 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 530 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 531 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 584 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 585 tctaggggtaaagcactgtttcggtgcgggctgcgcgagc 624 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagc 903
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 637 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 696 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 697 taaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccc 756 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | ||| ||||||||||||| |||||||||| Sbjct: 757 cggaaggggagtgaaatagaacatgaaaccgtg 789 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||| ||||||| |||||||||||||||| |||| Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagc 1161
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 362 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 421 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 422 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 481 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 482 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 541 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 542 ggttctccccgaaatgcgttgaggcg 567 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Minus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 2657911 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 2657852 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 2657851 taaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccc 2657792 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | ||| ||||||||||||| |||||||||| Sbjct: 2657791 cggaaggggagtgaaatagaacatgaaaccgtg 2657759 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 571010 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 571069 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 571070 taaatactcctgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccc 571129 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | ||| ||||||||||||| |||||||||| Sbjct: 571130 cggaaggggagtgaaatagaacatgaaaccgtg 571162 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Minus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||| ||||||| |||||||||||||||| |||| Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagc 2657387 Score = 48.1 bits (24), Expect = 0.035 Identities = 33/36 (91%) Strand = Plus / Plus Query: 589 ggggtaaagcactgtttcggtgcgggctgcgcgagc 624 |||||| ||||||| |||||||||||||||| |||| Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagc 571534
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 226 bits (114), Expect = 7e-56 Identities = 192/218 (88%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 710 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 769 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 | ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | | Sbjct: 770 ccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcgg 829 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||||||||||||||||||||||| Sbjct: 830 agctagctggttctccccgaaatgcgttgaggcgcagc 867 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 585 tctaggggtaaagcactgtttcggtgcgggctg 617 ||||||||||||||||||||||||||||||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctg 916
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 272 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 273 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 226 bits (114), Expect = 7e-56 Identities = 192/218 (88%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 2479 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 2538 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 | ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | | Sbjct: 2539 ccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcgg 2598 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||||||||||||||||||||||||||||||| Sbjct: 2599 agctagctggttctccccgaaatgcgttgaggcgcagc 2636 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 585 tctaggggtaaagcactgtttcggtgcgggctg 617 ||||||||||||||||||||||||||||||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctg 2685
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 238 bits (120), Expect = 2e-59 Identities = 282/333 (84%), Gaps = 6/333 (1%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 398 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 399 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 458 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 459 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 518 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 519 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 578 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 579 tggacatctaggggtaaagcactgtttcggtgc 611 ||| ||||||||||||||||| ||||||||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 236 bits (119), Expect = 7e-59 Identities = 122/123 (99%) Strand = Plus / Plus Query: 53 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 185 Query: 113 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 172 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 186 tggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggtgaccg 245 Query: 173 ata 175 ||| Sbjct: 246 ata 248
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 236 bits (119), Expect = 7e-59 Identities = 194/218 (88%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 356 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 413 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 534 agctagctggttctccccgaaatgcgttgaggcgcagc 571 |||||||||| ||||||||||||||||||||||||||| Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagc 873 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgt 244 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 340 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA gene, partial sequence Length = 807 Score = 234 bits (118), Expect = 3e-58 Identities = 190/214 (88%) Strand = Plus / Plus Query: 354 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 413 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 414 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 473 |||||||||| ||||| |||||||||||||||| || || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggcgataccaagtggaggtccgaaccga 605 Query: 474 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 533 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 534 agctagctggttctccccgaaatgcgttgaggcg 567 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 153 bits (77), Expect = 8e-34 Identities = 134/153 (87%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||| || ||||||| ||| ||||||||||| || |||||||||| | ||||| Sbjct: 233 cccgagtagcacggagcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggc 292 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 ||| |||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 293 taagtactactgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 352 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgtg 245 | | ||| ||||||||||||| |||||||||| Sbjct: 353 cgggaggggagtgaaatagaacatgaaaccgtg 385 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 282 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 329 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 232 bits (117), Expect = 1e-57 Identities = 193/217 (88%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 395 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 454 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 455 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 514 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 515 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 574 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 575 tgactggacatctaggggtaaagcactgtttcggtgc 611 | || ||| ||||||||||||||||| ||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgc 868 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 55 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 114 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 115 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 174 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 175 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 234 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 235 gtgaaa 240 ||||| Sbjct: 504 atgaaa 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 279 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 338 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 339 gg 340 || Sbjct: 602 gg 603
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 232 bits (117), Expect = 1e-57 Identities = 198/225 (88%), Gaps = 5/225 (2%) Strand = Plus / Plus Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 406 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 407 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 466 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 467 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 526 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 527 aacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 ||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc 986 Score = 167 bits (84), Expect = 5e-38 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 569 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaaccc 627 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgt 244 | ||| ||||||||||||| ||||||||| Sbjct: 628 ctgtaggggagtgaaatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 232 bits (117), Expect = 1e-57 Identities = 198/225 (88%), Gaps = 5/225 (2%) Strand = Plus / Plus Query: 352 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 406 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 407 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 466 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 467 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 526 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 527 aacccagagctagctggttctccccgaaatgcgttgaggcgcagc 571 ||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc 986 Score = 167 bits (84), Expect = 5e-38 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 93 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 152 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 153 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 212 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 569 taaatactcctgggtgaccgatagtgca-aagtaccgcgagggaatggtgataagaaccc 627 Query: 213 ccagtgggtagtgaaatagaacgtgaaaccgt 244 | ||| ||||||||||||| ||||||||| Sbjct: 628 ctgtaggggagtgaaatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 281 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 339 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,414,708 Number of Sequences: 3902068 Number of extensions: 3414708 Number of successful extensions: 95269 Number of sequences better than 10.0: 25480 Number of HSP's better than 10.0 without gapping: 25312 Number of HSP's successfully gapped in prelim test: 199 Number of HSP's that attempted gapping in prelim test: 53774 Number of HSP's gapped (non-prelim): 39447 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)