ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16i20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1096 bits (553), Expect = 0.0 Identities = 556/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119857 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119798 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119797 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119738 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119737 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119678 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119618 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119617 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119558 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119557 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119498 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119438 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119437 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 119378 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119377 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 119318 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 119317 aaccgactgatgttgaa 119301 Score = 1096 bits (553), Expect = 0.0 Identities = 556/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95037 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95096 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95097 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95156 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95157 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95216 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95217 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95276 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95277 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95336 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95337 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95396 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95397 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95456 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95457 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 95516 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95517 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 95576 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 95577 aaccgactgatgttgaa 95593
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118638 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 118579 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118578 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 118519 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118518 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 118459 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118458 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 118399 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118398 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 118339 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118338 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 118279 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118278 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 118219 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118218 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 118159 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118158 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 118099 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 118098 aaccgactgatgttgaa 118082
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119663 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119603 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119602 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119543 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119542 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119483 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119423 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119363 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119303 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119302 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119243 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119242 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 119183 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 119182 aaccgactgatgttgaa 119166 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95493 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95494 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95553 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95554 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95613 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95673 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95733 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95793 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95794 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95853 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95854 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95913 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 95973 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 95974 aaccgactgatgttgaa 95990
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119722 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119663 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119662 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119603 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119602 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119543 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119542 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119483 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119482 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119423 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119422 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119363 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119362 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119303 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119302 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119243 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119242 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 119183 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 119182 aaccgactgatgttgaa 119166 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95493 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95494 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95553 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95554 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95613 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95673 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95733 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95793 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95794 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95853 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95854 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95913 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 95973 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 95974 aaccgactgatgttgaa 95990
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119671 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119612 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119611 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119552 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119551 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119492 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119491 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119432 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119431 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119372 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119371 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119312 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119311 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119252 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119251 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119192 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119191 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 119132 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 119131 aaccgactgatgttgaa 119115 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95438 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95439 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95498 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95499 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95558 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95559 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95618 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95619 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95678 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95679 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95738 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95739 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95798 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95799 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95858 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95859 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 95918 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 95919 aaccgactgatgttgaa 95935
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508012 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 31508071 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508072 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 31508131 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31508132 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 31508191 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508192 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 31508251 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508252 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 31508311 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508312 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 31508371 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508372 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 31508431 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 31508432 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 31508491 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508492 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 31508551 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 31508552 aaccgactgatgttgaa 31508568
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84584 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 84525 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84524 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 84465 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84464 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 84405 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84404 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 84345 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84344 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 84285 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84284 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 84225 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84224 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 84165 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 84164 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 84105 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84104 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 84045 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 84044 aaccgactgatgttgaa 84028
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119632 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119572 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119571 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119512 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119511 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119452 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119392 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119391 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119332 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119331 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119272 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119271 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119212 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119211 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 119152 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 119151 aaccgactgatgttgaa 119135 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95427 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95486 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95487 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95546 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95547 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95606 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95607 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95666 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95667 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95726 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95727 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95786 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95787 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95846 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95847 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95906 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95907 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 95966 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 95967 aaccgactgatgttgaa 95983
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58410 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 58351 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58350 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 58291 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 58290 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 58231 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58230 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 58171 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58170 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 58111 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58110 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 58051 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58050 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 57991 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 57990 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 57931 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57930 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 57871 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 57870 aaccgactgatgttgaa 57854
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268361 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9268420 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268421 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9268480 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9268481 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9268540 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268541 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9268600 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268601 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9268660 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268661 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9268720 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268721 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9268780 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9268781 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9268840 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268841 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 9268900 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 9268901 aaccgactgatgttgaa 9268917 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227861 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9227920 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227921 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9227980 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9227981 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9228040 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228041 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9228100 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228101 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9228160 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228161 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9228220 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228221 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9228280 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9228281 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9228340 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228341 gaacctaggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 9228400 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 9228401 aaccgactgatgttgaa 9228417 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056275 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9056334 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056335 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9056394 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9056395 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9056454 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056455 gcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9056514 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056515 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9056574 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056575 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9056634 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056635 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9056694 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9056695 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9056754 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056755 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 9056814 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 9056815 aaccgactgatgttgaa 9056831 Score = 1065 bits (537), Expect = 0.0 Identities = 553/557 (99%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164450 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9164509 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164510 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9164569 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9164570 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9164629 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164630 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9164689 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164690 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9164749 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164750 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9164809 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164810 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 9164869 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9164870 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9164929 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164930 gaa-ctaggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 9164988 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 9164989 aaccgactgatgttgaa 9165005 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 238 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 297 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 298 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938346 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 19938405 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938406 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 19938465 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19938466 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 19938525 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938526 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 19938585 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938586 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 19938645 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938646 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 19938705 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938706 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 19938765 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19938766 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 19938825 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938826 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 19938885 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 19938886 aaccgactgatgttgaa 19938902 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277085 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10277026 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277025 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10276966 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10276965 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10276906 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276905 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10276846 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276845 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 10276786 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276785 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10276726 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276725 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10276666 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10276665 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10276606 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276605 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 10276546 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 10276545 aaccgactgatgttgaa 10276529 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10387272 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387273 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10387332 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10387333 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10387392 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10387452 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10387453 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 10387512 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387513 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10387572 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387573 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10387632 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10387633 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10387692 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387693 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 10387752 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 10387753 aaccgactgatgttgaa 10387769 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 256 agtaccgtgagggaaaggtgaaaagaacccc 286 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 ttgtgctgctaggcgaagcggttgagtgc 109 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598528 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 31598587 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598588 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 31598647 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 31598648 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 31598707 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598708 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 31598767 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598768 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 31598827 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598828 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 31598887 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598888 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 31598947 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 31598948 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 31599007 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599008 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 31599067 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 31599068 aaccgactgatgttgaa 31599084
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525844 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 33525903 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525904 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 33525963 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33525964 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 33526023 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526024 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 33526083 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526084 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 33526143 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526144 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 33526203 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526204 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 33526263 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33526264 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 33526323 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526324 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 33526383 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 33526384 aaccgactgatgttgaa 33526400 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 260 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 319 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 320 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 379 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 380 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 274 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 333 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 334 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 383 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 267 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 305 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47697 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 47638 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47637 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 47578 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 47577 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 47518 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47517 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 47458 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47457 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 47398 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47397 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 47338 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47337 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 47278 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 47277 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 47218 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47217 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 47158 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 47157 aaccgactgatgttgaa 47141
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71041 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 71100 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71101 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 71160 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 71161 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 71220 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71221 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 71280 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71281 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 71340 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71341 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 71400 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71401 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 71460 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 71461 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 71520 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71521 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 71580 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 71581 aaccgactgatgttgaa 71597 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 64 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 124 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 125 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 184 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 244 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 304 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 364 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 424 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 425 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 484 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 544 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 545 aaccgactgatgttgaa 561
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 272 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 332 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 333 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 392 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 452 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 512 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 572 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 632 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 633 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 692 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 752 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 753 aaccgactgatgttgaa 769
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 67 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 127 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 128 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 187 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 247 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 307 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 367 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 427 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 428 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 487 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 547 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 548 aaccgactgatgttgaa 564
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 179 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 239 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 240 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 299 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 359 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 419 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 479 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 539 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 540 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 599 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 659 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 660 aaccgactgatgttgaa 676
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 69 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 129 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 189 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 249 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 309 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 369 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 429 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 430 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 489 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 549 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 550 aaccgactgatgttgaa 566
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 67 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 127 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 128 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 187 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 247 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 307 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 367 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 427 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 428 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 487 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 547 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 548 aaccgactgatgttgaa 564
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 69 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 129 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 189 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 249 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 309 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 369 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 429 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 430 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 489 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 549 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 550 aaccgactgatgttgaa 566
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949622 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 19949681 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949682 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 19949741 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19949742 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 19949801 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949802 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 19949861 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949862 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 19949921 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949922 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 19949981 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949982 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 19950041 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19950042 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 19950101 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950102 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 19950161 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 19950162 aaccgactgatgttgaa 19950178 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283124 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10283065 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283064 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10283005 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10283004 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10282945 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282944 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10282885 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282884 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 10282825 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282824 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10282765 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282764 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10282705 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10282704 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10282645 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282644 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 10282585 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 10282584 aaccgactgatgttgaa 10282568 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393252 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 10393311 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393312 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 10393371 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10393372 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 10393431 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393432 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 10393491 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 10393492 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 10393551 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393552 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 10393611 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393612 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 10393671 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10393672 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 10393731 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393732 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 10393791 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 10393792 aaccgactgatgttgaa 10393808 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 ttgtgctgctaggcgaagcggttgagtgc 109 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119665 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 119606 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119605 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 119546 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 119545 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 119486 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119485 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 119426 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119425 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 119366 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119365 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 119306 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119305 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 119246 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119245 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 119186 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119185 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 119126 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 119125 aaccgactgatgttgaa 119109 Score = 1088 bits (549), Expect = 0.0 Identities = 555/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95374 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 95433 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95434 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 95493 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 95494 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 95553 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95554 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 95613 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95614 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 95673 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95674 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 95733 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 95793 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95794 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 95853 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95854 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 95913 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 95914 aaccgactgatgttgaa 95930
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 709 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 649 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 648 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 589 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 529 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 469 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 409 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 408 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 349 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 348 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 289 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 229 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 228 aaccgactgatgttgaa 212
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14201 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 14260 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14261 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 14320 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14321 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 14380 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14381 gcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 14440 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14441 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 14500 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14501 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 14560 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14561 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 14620 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14621 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 14680 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14681 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 14740 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 14741 aaccgactgatgttgaa 14757 Score = 1065 bits (537), Expect = 0.0 Identities = 553/557 (99%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122476 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 122535 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122536 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 122595 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122596 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 122655 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122656 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 122715 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122716 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 122775 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122776 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 122835 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122836 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 122895 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122896 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 122955 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122956 gaa-ctaggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 123014 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 123015 aaccgactgatgttgaa 123031
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141009 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 141068 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141069 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 141128 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 141129 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 141188 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141189 gcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 141248 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141249 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 141308 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141309 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 141368 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141369 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 141428 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141429 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 141488 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141489 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 141548 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 141549 aaccgactgatgttgaa 141565
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93605 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 93664 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93665 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 93724 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 93725 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 93784 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93785 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 93844 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 93845 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 93904 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93905 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 93964 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93965 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 94024 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 94025 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 94084 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94085 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 94144 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 94145 aaccgactgatgttgaa 94161
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20436 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 20495 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20496 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 20555 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 20556 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 20615 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20616 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 20675 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20676 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 20735 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20736 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 20795 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 20796 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 20855 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 20856 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 20915 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20916 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 20975 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 20976 aaccgactgatgttgaa 20992 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44682 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 44623 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44622 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 44563 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 44562 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 44503 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44502 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 44443 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44442 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 44383 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44382 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 44323 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 44322 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 44263 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 44262 ccctccggagccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 44203 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44202 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 44143 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 44142 aaccgactgatgttgaa 44126
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 1252 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 1192 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1191 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 1132 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 1072 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 1012 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 952 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 951 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 892 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 891 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 832 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 772 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 771 aaccgactgatgttgaa 755
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27669 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 27728 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27729 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 27788 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27789 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 27848 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27849 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 27908 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 27909 gaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaa 27968 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27969 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 28028 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28029 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 28088 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28089 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 28148 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28149 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 28208 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 28209 aaccgactgatgttgaa 28225
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123521 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 123462 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123461 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 123402 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 123401 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 123342 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123341 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 123282 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123281 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 123222 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123221 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 123162 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123161 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 123102 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123101 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 123042 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123041 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 122982 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 122981 aaccgactgatgttgaa 122965 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99316 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 99375 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99376 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 99435 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99436 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 99495 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99496 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 99555 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99556 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 99615 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99616 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 99675 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99676 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 99735 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 99736 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 99795 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99796 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 99855 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 99856 aaccgactgatgttgaa 99872
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 66 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 126 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 127 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 186 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 246 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 306 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 366 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 426 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 427 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 486 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 487 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaaccaagcagaggtccg 546 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 547 aaccgactgatgttgaa 563
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124238 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 124179 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124178 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 124119 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 124118 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 124059 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124058 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 123999 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123998 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 123939 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123938 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 123879 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123878 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 123819 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123818 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 123759 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123758 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 123699 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 123698 aaccgactgatgttgaa 123682 Score = 1080 bits (545), Expect = 0.0 Identities = 554/557 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99993 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 100052 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100053 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 100112 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100113 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 100172 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100173 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 100232 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100233 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 100292 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100293 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 100352 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 100353 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 100412 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100413 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 100472 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100473 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 100532 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 100533 aaccgactgatgttgaa 100549
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241920 agcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 9241861 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241860 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 9241801 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9241800 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 9241741 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241740 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 9241681 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241680 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 9241621 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241620 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 9241561 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241560 cgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaa 9241501 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241500 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 9241441 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241440 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 9241381 Query: 541 aaccgactgatgttgaa 557 ||||| ||||||||||| Sbjct: 9241380 aaccgtctgatgttgaa 9241364
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1065 bits (537), Expect = 0.0 Identities = 552/557 (99%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 53133 agcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 53074 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53073 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 53014 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 53013 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 52954 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52953 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 52894 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52893 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 52834 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52833 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 52774 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52773 cgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaa 52714 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52713 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 52654 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52653 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 52594 Query: 541 aaccgactgatgttgaa 557 ||||| ||||||||||| Sbjct: 52593 aaccgtctgatgttgaa 52577
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1041 bits (525), Expect = 0.0 Identities = 550/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123460 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 123401 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123400 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 123341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 123340 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 123282 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123281 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 123222 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123221 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 123162 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123161 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 123102 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123101 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 123042 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123041 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 122982 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122981 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 122922 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 122921 aaccgactgatgttgaa 122905 Score = 1041 bits (525), Expect = 0.0 Identities = 550/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99277 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 99336 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99337 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 99396 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 99397 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 99455 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99456 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 99515 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99516 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 99575 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99576 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 99635 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99636 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 99695 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 99696 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 99755 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99756 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 99815 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 99816 aaccgactgatgttgaa 99832
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1041 bits (525), Expect = 0.0 Identities = 550/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5630 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 5689 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5690 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 5749 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 5750 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 5808 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5809 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 5868 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5869 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 5928 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5929 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 5988 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5989 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 6048 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6049 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 6108 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6109 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 6168 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 6169 aaccgactgatgttgaa 6185
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1041 bits (525), Expect = 0.0 Identities = 550/557 (98%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 277 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 gtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 337 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||| Sbjct: 338 tggctatagtccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggg 396 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 456 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 516 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 576 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 577 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaa 636 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 637 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 696 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 756 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 757 aaccgactgatgttgaa 773
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 993 bits (501), Expect = 0.0 Identities = 510/513 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 175 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 235 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 236 tggctaaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggg 295 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 355 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 415 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 475 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 535 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 536 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 595 Query: 481 gaacctgggtgatctatccatgaccaggatgaa 513 ||||||||||||||||||||||||||||||||| Sbjct: 596 gaacctgggtgatctatccatgaccaggatgaa 628
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 977 bits (493), Expect = 0.0 Identities = 538/554 (97%), Gaps = 13/554 (2%) Strand = Plus / Minus Query: 9 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 69 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 129 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 188 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 189 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 364 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 75007 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75006 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 74947 Query: 544 cgactgatgttgaa 557 |||||||||||||| Sbjct: 74946 cgactgatgttgaa 74933 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 977 bits (493), Expect = 0.0 Identities = 538/554 (97%), Gaps = 13/554 (2%) Strand = Plus / Plus Query: 9 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 69 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 129 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 188 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 189 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 364 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 382531 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382532 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 382591 Query: 544 cgactgatgttgaa 557 |||||||||||||| Sbjct: 382592 cgactgatgttgaa 382605 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 977 bits (493), Expect = 0.0 Identities = 538/554 (97%), Gaps = 13/554 (2%) Strand = Plus / Minus Query: 9 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 69 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 129 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 188 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 189 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 364 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 113098 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113097 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 113038 Query: 544 cgactgatgttgaa 557 |||||||||||||| Sbjct: 113037 cgactgatgttgaa 113024 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 977 bits (493), Expect = 0.0 Identities = 538/554 (97%), Gaps = 13/554 (2%) Strand = Plus / Minus Query: 9 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 69 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 129 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 188 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 189 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 364 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 367780 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367779 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 367720 Query: 544 cgactgatgttgaa 557 |||||||||||||| Sbjct: 367719 cgactgatgttgaa 367706 Score = 977 bits (493), Expect = 0.0 Identities = 538/554 (97%), Gaps = 13/554 (2%) Strand = Plus / Minus Query: 9 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 69 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 129 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 188 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 189 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 364 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa 184385 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184384 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 184325 Query: 544 cgactgatgttgaa 557 |||||||||||||| Sbjct: 184324 cgactgatgttgaa 184311 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 286 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 886 bits (447), Expect = 0.0 Identities = 530/557 (95%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134009 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 133950 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 133949 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctaga 133890 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133889 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 133830 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133829 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 133770 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 133769 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 133710 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||||| Sbjct: 133709 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccg 133653 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133652 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 133598 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133597 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 133538 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 133537 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 133478 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 133477 aaccgactgatgttgaa 133461 Score = 886 bits (447), Expect = 0.0 Identities = 530/557 (95%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103962 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104021 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 104022 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctaga 104081 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104082 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 104141 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104142 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104201 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 104202 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 104261 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||||| Sbjct: 104262 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccg 104318 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104319 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104373 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104374 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 104433 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 104434 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 104493 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 104494 aaccgactgatgttgaa 104510
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 870 bits (439), Expect = 0.0 Identities = 528/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139372 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 139313 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||| Sbjct: 139312 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctaga 139253 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 139252 tggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagcatggg 139193 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139192 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 139133 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 139132 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 139073 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 139072 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 139016 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139015 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 138961 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 138960 cccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 138901 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 138900 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 138841 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 138840 aaccgactgatgttgaa 138824 Score = 870 bits (439), Expect = 0.0 Identities = 528/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110573 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 110632 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||| Sbjct: 110633 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctaga 110692 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 110693 tggcgagagtccagtagccgaaagcatcactggcttacgctctgacccgagtagcatggg 110752 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110753 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 110812 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 110813 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 110872 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 110873 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 110929 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110930 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 110984 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110985 cccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 111044 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 111045 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 111104 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 111105 aaccgactgatgttgaa 111121
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 870 bits (439), Expect = 0.0 Identities = 528/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141894 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 141835 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| Sbjct: 141834 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctaga 141775 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 141774 tggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggg 141715 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 141714 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 141655 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 141654 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 141595 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 141594 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 141538 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 141537 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 141483 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 141482 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 141423 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 141422 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 141363 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 141362 aaccgactgatgttgaa 141346 Score = 870 bits (439), Expect = 0.0 Identities = 528/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111763 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 111822 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| Sbjct: 111823 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctaga 111882 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||| |||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 111883 tggcgagagtccagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggg 111942 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 111943 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 112002 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 112003 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 112062 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 112063 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccg 112119 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 112120 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 112174 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 112175 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 112234 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 112235 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 112294 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 112295 aaccgactgatgttgaa 112311
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 870 bits (439), Expect = 0.0 Identities = 528/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127650 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 127591 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| Sbjct: 127590 gtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctaga 127531 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 127530 tggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagcatggg 127471 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127470 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 127411 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 127410 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 127351 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 127350 atagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgaccg 127294 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127293 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaat---- 127238 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127237 -ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 127179 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 127178 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 127119 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 127118 aaccgactgatgttgaa 127102 Score = 870 bits (439), Expect = 0.0 Identities = 528/557 (94%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107272 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 107331 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||| Sbjct: 107332 gtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctaga 107391 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 107392 tggcgagagtccagtagccgaaaacatcactagcttacgctctgacccgagtagcatggg 107451 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107452 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 107511 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 107512 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 107571 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||| Sbjct: 107572 atagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgaccg 107628 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107629 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaat---- 107684 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107685 -ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 107743 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 107744 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 107803 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 107804 aaccgactgatgttgaa 107820
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 860 bits (434), Expect = 0.0 Identities = 527/557 (94%), Gaps = 12/557 (2%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134767 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 134708 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 134707 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctaga 134648 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 134647 tggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagcatggg 134588 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134587 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 134528 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 134527 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 134468 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 134467 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccg 134415 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 134414 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 134360 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134359 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 134300 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 134299 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 134240 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 134239 aaccgactgatgttgaa 134223 Score = 860 bits (434), Expect = 0.0 Identities = 527/557 (94%), Gaps = 12/557 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105515 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105574 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 105575 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctaga 105634 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| |||||||||||||||||||||||||||||| | ||| |||||||||||||||| Sbjct: 105635 tggctagagtccagtagccgaaagcatcactagcttacgttctaacccgagtagcatggg 105694 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105695 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 105754 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 105755 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 105814 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct: 105815 atagaacatgaaaccg---tgagctcccaagcagtgggaggagaa----atctctgaccg 105867 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105868 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 105922 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105923 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 105982 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 105983 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 106042 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 106043 aaccgactgatgttgaa 106059
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 848 bits (428), Expect = 0.0 Identities = 526/557 (94%), Gaps = 10/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136318 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 136317 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 136258 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 136257 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 136198 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136197 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 136138 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 136137 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 136078 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || | ||||||||| Sbjct: 136077 atagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccg 136023 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 136022 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 135968 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135967 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 135908 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 135907 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 135848 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 135847 aaccgactgatgttgaa 135831 Score = 848 bits (428), Expect = 0.0 Identities = 526/557 (94%), Gaps = 10/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106107 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 106108 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 106167 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106168 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 106227 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106228 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 106287 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 106288 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 106347 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || | ||||||||| Sbjct: 106348 atagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccg 106402 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106403 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 106457 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106458 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 106517 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 106518 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 106577 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 106578 aaccgactgatgttgaa 106594
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 846 bits (427), Expect = 0.0 Identities = 433/435 (99%) Strand = Plus / Plus Query: 123 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 182 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 183 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 243 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 303 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 363 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 423 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 482 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 360 Query: 483 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 420 Query: 543 ccgactgatgttgaa 557 ||||||||||||||| Sbjct: 421 ccgactgatgttgaa 435
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 839 bits (423), Expect = 0.0 Identities = 525/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132561 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 132502 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 132501 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 132442 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132441 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 132382 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132381 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 132322 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 132321 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 132262 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 132261 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 132206 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132205 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 132151 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132150 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 132091 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 132090 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 132031 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 132030 aaccgactgatgttgaa 132014 Score = 839 bits (423), Expect = 0.0 Identities = 525/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104317 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104376 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 104377 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 104436 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104437 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 104496 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104497 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104556 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 104557 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 104616 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 104617 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 104672 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104673 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104727 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104728 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 104787 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 104788 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 104847 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 104848 aaccgactgatgttgaa 104864
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 839 bits (423), Expect = 0.0 Identities = 525/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132784 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 132725 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 132724 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 132665 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132664 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 132605 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132604 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 132545 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 132544 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 132485 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 132484 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 132429 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132428 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 132374 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132373 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 132314 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| Sbjct: 132313 gaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccg 132254 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 132253 aaccgactgatgttgaa 132237 Score = 839 bits (423), Expect = 0.0 Identities = 525/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103980 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104039 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 104040 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 104099 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104100 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 104159 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104160 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104219 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 104220 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 104279 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 104280 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 104335 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104336 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104390 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104391 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 104450 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| Sbjct: 104451 gaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccg 104510 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 104511 aaccgactgatgttgaa 104527
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 839 bits (423), Expect = 0.0 Identities = 525/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132554 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 132495 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 132494 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 132435 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132434 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 132375 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132374 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 132315 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 132314 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 132255 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 132254 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 132199 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 132198 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 132144 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132143 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 132084 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 132083 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 132024 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 132023 aaccgactgatgttgaa 132007 Score = 839 bits (423), Expect = 0.0 Identities = 525/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104315 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104374 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 104375 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 104434 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104435 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 104494 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104495 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 104554 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 104555 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 104614 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 104615 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 104670 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104671 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 104725 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104726 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 104785 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 104786 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 104845 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 104846 aaccgactgatgttgaa 104862
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 831 bits (419), Expect = 0.0 Identities = 524/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131453 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 131394 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 131393 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 131334 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 131333 tggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 131274 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131273 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 131214 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 131213 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 131154 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 131153 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 131098 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131097 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 131043 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131042 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 130983 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 130982 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 130923 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 130922 aaccgactgatgttgaa 130906 Score = 831 bits (419), Expect = 0.0 Identities = 524/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103182 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 103241 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 103242 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 103301 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 103302 tggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 103361 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103362 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 103421 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 103422 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 103481 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 103482 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 103537 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103538 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 103592 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 103593 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 103652 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 103653 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 103712 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 103713 aaccgactgatgttgaa 103729
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 831 bits (419), Expect = 0.0 Identities = 524/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133745 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 133686 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 133685 gtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 133626 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133625 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 133566 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133565 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 133506 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 133505 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 133446 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 133445 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 133390 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133389 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 133335 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 133334 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 133275 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| Sbjct: 133274 gaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccg 133215 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 133214 aaccgactgatgttgaa 133198 Score = 831 bits (419), Expect = 0.0 Identities = 524/557 (94%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104904 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 104963 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 104964 gtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 105023 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105024 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 105083 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105084 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 105143 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 105144 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 105203 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 105204 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 105259 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105260 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 105314 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105315 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 105374 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| Sbjct: 105375 gaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccg 105434 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 105435 aaccgactgatgttgaa 105451
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136086 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136027 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 136026 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 135967 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135966 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 135907 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135906 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135847 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135846 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135787 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135786 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135732 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135731 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135677 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135676 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135617 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135616 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135557 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 135556 gaaccgactgatgttgaa 135539 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106544 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106603 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 106604 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 106663 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106664 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 106723 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106724 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106783 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106784 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106843 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106844 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106898 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106899 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106953 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106954 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107013 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107014 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107073 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 107074 gaaccgactgatgttgaa 107091
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136724 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136665 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 136664 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 136605 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136604 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 136545 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136544 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 136485 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 136484 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 136425 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 136424 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 136370 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136369 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 136315 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 136314 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 136255 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 136254 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 136195 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 136194 gaaccgactgatgttgaa 136177 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106833 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106892 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 106893 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 106952 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106953 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 107012 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107013 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 107072 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 107073 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 107132 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 107133 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 107187 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107188 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 107242 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107243 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107302 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107303 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107362 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 107363 gaaccgactgatgttgaa 107380
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1738 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 1797 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 1798 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 1857 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1858 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 1917 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 1977 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 1978 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 2037 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 2038 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 2092 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2093 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 2147 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2148 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 2207 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 2208 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 2267 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 2268 gaaccgactgatgttgaa 2285
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135332 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135273 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135272 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135213 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135212 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135153 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135152 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135093 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135092 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135033 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135032 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 134978 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134977 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 134923 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134922 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134863 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134862 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134803 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 134802 gaaccgactgatgttgaa 134785 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105763 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105764 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105823 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105824 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 105883 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105943 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105944 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106003 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106004 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106058 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106059 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106113 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106114 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106173 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106174 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106233 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 106234 gaaccgactgatgttgaa 106251
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135467 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135408 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135407 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135348 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135347 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135288 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135287 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135228 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135227 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135168 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135167 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135113 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135112 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135058 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135057 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134998 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134997 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134938 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 134937 gaaccgactgatgttgaa 134920 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105876 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105935 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105936 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105995 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105996 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 106055 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106056 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106115 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106116 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106175 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106176 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106230 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106231 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106285 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106286 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106345 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106346 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106405 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 106406 gaaccgactgatgttgaa 106423
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135465 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135406 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135405 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135346 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135345 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135286 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135285 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135226 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135225 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135166 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135165 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135111 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135110 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135056 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135055 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134996 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134995 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134936 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 134935 gaaccgactgatgttgaa 134918 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105873 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105932 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105933 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105992 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105993 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 106052 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106053 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106112 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106113 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106172 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106173 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106227 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106228 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106282 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106283 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106342 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106343 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106402 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 106403 gaaccgactgatgttgaa 106420
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135377 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135318 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135317 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135258 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135257 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135198 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135197 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135138 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135137 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135078 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135077 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135023 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135022 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 134968 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134967 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134908 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134907 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134848 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 134847 gaaccgactgatgttgaa 134830 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105751 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105810 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105811 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105870 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105871 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 105930 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105931 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105990 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105991 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106050 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106051 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106105 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106106 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106160 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106161 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106220 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106221 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106280 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 106281 gaaccgactgatgttgaa 106298
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136084 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 136025 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 136024 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 135965 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135964 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 135905 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135904 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135845 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135844 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135785 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135784 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135730 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135729 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135675 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135674 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135615 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135614 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135555 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 135554 gaaccgactgatgttgaa 135537 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106542 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106601 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 106602 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 106661 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106662 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 106721 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106722 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106781 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106782 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106841 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106842 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106896 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106897 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106951 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106952 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107011 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107012 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107071 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 107072 gaaccgactgatgttgaa 107089
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135815 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135756 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 135755 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 135696 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135695 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 135636 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135635 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135576 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135575 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135516 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135515 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 135461 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135460 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 135406 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135405 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135346 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135345 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135286 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 135285 gaaccgactgatgttgaa 135268 Score = 827 bits (417), Expect = 0.0 Identities = 525/558 (94%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106323 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106382 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 106383 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 106442 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106443 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 106502 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106503 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106562 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106563 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106622 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106623 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106677 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106678 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 106732 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106733 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106792 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106793 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106852 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 106853 gaaccgactgatgttgaa 106870
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 823 bits (415), Expect = 0.0 Identities = 523/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140146 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 140087 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| Sbjct: 140086 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctaga 140027 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 140026 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 139967 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139966 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 139907 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 139906 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 139847 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | || ||||||||||||||||| | | | | ||||||||| Sbjct: 139846 atagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccg 139791 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139790 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 139736 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 139735 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 139676 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 139675 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 139616 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 139615 aaccgactgatgttgaa 139599 Score = 823 bits (415), Expect = 0.0 Identities = 523/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109914 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 109973 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||| || ||| |||||||||| Sbjct: 109974 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctaga 110033 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110034 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 110093 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110094 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 110153 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 110154 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 110213 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | || ||||||||||||||||| | | | | ||||||||| Sbjct: 110214 atagaacatgaaaccg---taagttcccaagcagtgggaggag-acgggggctctgaccg 110269 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110270 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 110324 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110325 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 110384 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 110385 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 110444 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 110445 aaccgactgatgttgaa 110461
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 823 bits (415), Expect = 0.0 Identities = 523/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131577 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 131518 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 131517 gtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctaga 131458 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131457 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 131398 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131397 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 131338 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 131337 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 131278 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | ||||| |||||||||||||||| | || | ||||||| Sbjct: 131277 atagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccg 131222 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131221 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 131167 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131166 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 131107 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 131106 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 131047 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 131046 aaccgactgatgttgaa 131030 Score = 823 bits (415), Expect = 0.0 Identities = 523/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101868 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 101927 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 101928 gtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctaga 101987 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101988 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 102047 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102048 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 102107 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 102108 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 102167 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | ||||| |||||||||||||||| | || | ||||||| Sbjct: 102168 atagaacatgaaaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccg 102223 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 102224 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 102278 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 102279 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 102338 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 102339 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 102398 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 102399 aaccgactgatgttgaa 102415
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 823 bits (415), Expect = 0.0 Identities = 523/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 272 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 273 gtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 332 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 333 tggcgagagtccagtagccgagagcatcactagcttatgctctgacccgagtagcatggg 392 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 452 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 453 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 512 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | || ||||||||| Sbjct: 513 atagaacatgaaaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccg 568 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 569 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 623 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 624 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 683 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| Sbjct: 684 gaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccg 743 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 744 aaccgactgatgttgaa 760
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 819 bits (413), Expect = 0.0 Identities = 416/417 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 269 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 329 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 330 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 389 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 390 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 449 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 509 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 569 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 417 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 626
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 819 bits (413), Expect = 0.0 Identities = 524/558 (93%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135344 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135285 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 135284 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 135225 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135224 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 135165 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135164 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135105 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135104 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135045 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 135044 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 134990 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 134989 gcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag-----gga 134935 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134934 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134875 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134874 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134815 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 134814 gaaccgactgatgttgaa 134797 Score = 819 bits (413), Expect = 0.0 Identities = 524/558 (93%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105718 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 105777 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| ||||||||| Sbjct: 105778 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctag 105837 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105838 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 105897 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105898 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105957 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105958 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106017 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 106018 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 106072 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 106073 gcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag-----gga 106127 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106128 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106187 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106188 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106247 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 106248 gaaccgactgatgttgaa 106265
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 817 bits (412), Expect = 0.0 Identities = 524/558 (93%), Gaps = 10/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 59 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 agcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 273 Query: 60 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 119 |||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| Sbjct: 274 tgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctag 333 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 334 atggctagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 393 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 453 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 454 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtga 513 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | | | |||||||| Sbjct: 514 aatagaacatgaaaccg---taagctcccaagcagtgggaggagcctg-gggctctgacc 569 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 570 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 624 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 625 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 684 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 685 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 744 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 745 gaaccgactgatgttgaa 762
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 815 bits (411), Expect = 0.0 Identities = 522/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 577 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 578 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 632 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 633 cccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggaccc 692 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 693 gaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagtggaggtccg 752 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 753 aaccgactgatgttgaa 769
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 811 bits (409), Expect = 0.0 Identities = 523/558 (93%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139290 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 139231 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||| Sbjct: 139230 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctaga 139171 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139170 tggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 139111 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139110 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 139051 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 139050 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaa 138991 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgacc 359 ||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 138990 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgacc 138936 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138935 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 138881 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138880 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 138821 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 138820 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 138761 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 138760 gaaccgactgatgttgaa 138743 Score = 811 bits (409), Expect = 0.0 Identities = 523/558 (93%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109807 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 109866 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||| Sbjct: 109867 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctaga 109926 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 109927 tggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 109986 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109987 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 110046 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 110047 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaa 110106 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgacc 359 ||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 110107 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccaggg--ctctgacc 110161 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110162 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 110216 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110217 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 110276 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 110277 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 110336 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 110337 gaaccgactgatgttgaa 110354
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 807 bits (407), Expect = 0.0 Identities = 521/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106219 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106278 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| Sbjct: 106279 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctaga 106338 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106339 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 106398 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106399 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 106458 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 106459 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 106518 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||||| Sbjct: 106519 atagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccg 106574 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106575 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 106629 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 106630 cccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggaccc 106689 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 106690 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 106749 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 106750 aaccgactgatgttgaa 106766 Score = 757 bits (382), Expect = 0.0 Identities = 520/560 (92%), Gaps = 12/560 (2%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135690 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135631 Query: 61 gtgggagagcaa-tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 119 |||||||||||| ||||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 135630 gtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctag 135571 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctc-tgacccgagtagcatg 178 ||||| | |||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 135570 atggcgagagtccagtagccgaaagcatcactagcttacgcccctgacccgagtagcatg 135511 Query: 179 gggcacgtggaatcccgtgtgaatcagc-aaggaccaccttgcaaggctaaatactcctg 237 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 135510 gggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctg 135451 Query: 238 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 297 |||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||| Sbjct: 135450 ggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagt 135391 Query: 298 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 357 |||||||||| |||||||| | |||| ||||||||||||||| | | | | |||||| Sbjct: 135390 gaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctga 135335 Query: 358 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135334 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 135280 Query: 418 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 477 ||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||| Sbjct: 135279 gaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatgga 135220 Query: 478 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 537 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 135219 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 135160 Query: 538 ccgaaccgactgatgttgaa 557 |||||||||||||||||||| Sbjct: 135159 ccgaaccgactgatgttgaa 135140
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 807 bits (407), Expect = 0.0 Identities = 521/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135966 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 135907 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| Sbjct: 135906 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctaga 135847 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135846 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 135787 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135786 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 135727 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 135726 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 135667 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||||| Sbjct: 135666 atagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccg 135611 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135610 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 135556 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 135555 cccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggaccc 135496 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 135495 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 135436 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 135435 aaccgactgatgttgaa 135419 Score = 807 bits (407), Expect = 0.0 Identities = 521/557 (93%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106441 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 106500 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||| Sbjct: 106501 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctaga 106560 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106561 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 106620 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106621 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 106680 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 106681 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 106740 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||| ||||||||||||||| | | | | ||||||||| Sbjct: 106741 atagaacatgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccg 106796 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106797 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 106851 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 106852 cccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggaccc 106911 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 106912 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 106971 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 106972 aaccgactgatgttgaa 106988
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 803 bits (405), Expect = 0.0 Identities = 523/558 (93%), Gaps = 12/558 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 248 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | ||| ||| |||||| | Sbjct: 249 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-at 307 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 308 atggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 367 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 427 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 428 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 487 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 488 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 542 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 543 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 597 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 598 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 657 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 658 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 717 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 718 gaaccgactgatgttgaa 735
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 803 bits (405), Expect = 0.0 Identities = 522/558 (93%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142665 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 142606 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctag 119 ||||||||| |||||||||| ||||||||||||||||| | || ||||| ||||||||| Sbjct: 142605 gtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctag 142546 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 142545 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 142486 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 142485 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 142426 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 142425 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 142366 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | ||||||||||||||||||| | || | |||||||| Sbjct: 142365 aatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgacc 142311 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 142310 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 142256 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 142255 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 142196 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142195 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtcc 142136 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 142135 gaaccgactgatgttgaa 142118 Score = 803 bits (405), Expect = 0.0 Identities = 522/558 (93%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110663 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 110722 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctag 119 ||||||||| |||||||||| ||||||||||||||||| | || ||||| ||||||||| Sbjct: 110723 gtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctag 110782 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110783 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 110842 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110843 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 110902 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110903 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110962 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | ||||||||||||||||||| | || | |||||||| Sbjct: 110963 aatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgacc 111017 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111018 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 111072 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 111073 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 111132 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111133 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtcc 111192 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 111193 gaaccgactgatgttgaa 111210
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 801 bits (404), Expect = 0.0 Identities = 413/416 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 229 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 gtgggagagcagtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 289 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 290 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 349 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 409 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 469 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 470 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccg 529 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 801 bits (404), Expect = 0.0 Identities = 407/408 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 142 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 202 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 203 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 262 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 322 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 382 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 442 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 408 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 490
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 795 bits (401), Expect = 0.0 Identities = 506/539 (93%), Gaps = 9/539 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 471 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 470 gtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 411 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 410 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 351 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 291 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 290 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 231 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 230 atagaacatgaaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccg 175 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 174 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 120 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 119 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 60 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 59 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 1
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 791 bits (399), Expect = 0.0 Identities = 522/560 (93%), Gaps = 11/560 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139499 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 139440 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| || || ||| ||||||||| Sbjct: 139439 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctag 139380 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139379 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 139320 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139319 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 139260 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 139259 tgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 139200 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctga 357 |||||||| |||||||| | |||||||||||||||||||| || | | |||||| Sbjct: 139199 aatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggactctga 139143 Query: 358 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 139142 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 139088 Query: 418 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 477 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 139087 gaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 139028 Query: 478 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 537 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 139027 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 138968 Query: 538 ccgaaccgactgatgttgaa 557 |||||||||||||||||||| Sbjct: 138967 ccgaaccgactgatgttgaa 138948 Score = 791 bits (399), Expect = 0.0 Identities = 522/560 (93%), Gaps = 11/560 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109800 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 109859 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| || || ||| ||||||||| Sbjct: 109860 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctag 109919 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 109920 atggtgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgg 109979 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109980 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 110039 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110040 tgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110099 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctga 357 |||||||| |||||||| | |||||||||||||||||||| || | | |||||| Sbjct: 110100 aatagaacatgaaaccg---taagctcccaagcagtgggaggagactactaggactctga 110156 Query: 358 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 110157 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 110211 Query: 418 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 477 ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 110212 gaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 110271 Query: 478 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 537 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 110272 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 110331 Query: 538 ccgaaccgactgatgttgaa 557 |||||||||||||||||||| Sbjct: 110332 ccgaaccgactgatgttgaa 110351
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 789 bits (398), Expect = 0.0 Identities = 523/559 (93%), Gaps = 13/559 (2%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1982 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 2041 Query: 62 tgggagagcaatacaagcgtt-gtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 2042 tgggagagcaatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctag 2101 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2102 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 2161 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2162 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 2221 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 2222 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 2281 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 2282 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 2336 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2337 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 2391 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2392 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 2451 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga-ggtc 538 |||||||||||||||||||||||||||||||||||||||| |||||||||| || |||| Sbjct: 2452 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtc 2511 Query: 539 cgaaccgactgatgttgaa 557 ||||||||||||||||||| Sbjct: 2512 cgaaccgactgatgttgaa 2530
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 781 bits (394), Expect = 0.0 Identities = 519/558 (93%), Gaps = 12/558 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 769 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 770 gtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctaga 829 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 830 tggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 889 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 949 Query: 241 gaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 |||||||||| || ||||| ||||||||||||||||||||||||||||| ||| ||||| Sbjct: 950 gaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtga 1009 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | ||||| |||||||||||||| || || |||||||| Sbjct: 1010 aatagaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctctgacc 1063 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1064 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 1118 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1119 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 1178 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1179 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtcc 1238 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 1239 gaaccgactgatgttgaa 1256
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 781 bits (394), Expect = 0.0 Identities = 519/559 (92%), Gaps = 10/559 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88562 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 88621 Query: 61 gtgggagagca--atacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 118 ||||||||||| ||| |||| |||||||||||||||||||||||||| | |||||||| Sbjct: 88622 gtgggagagcacaatataagctctgtgctgctaggcgaagcggttgagtcctgcacccta 88681 Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 178 ||||| | |||||||||||||||||||||| | ||||| ||||| |||||||||||||| Sbjct: 88682 gatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagtagcatg 88741 Query: 179 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88742 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 88801 Query: 239 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 298 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 88802 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 88861 Query: 299 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 358 ||||||||| |||||||| | |||||||||||||||||||| || |||||||||| Sbjct: 88862 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgac 88918 Query: 359 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 418 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 88919 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaag-----gg 88973 Query: 419 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 478 ||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||| Sbjct: 88974 aacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggac 89033 Query: 479 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 538 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 89034 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 89093 Query: 539 cgaaccgactgatgttgaa 557 ||||||||||||||||||| Sbjct: 89094 cgaaccgactgatgttgaa 89112
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 779 bits (393), Expect = 0.0 Identities = 517/557 (92%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||| ||| |||||||| | ||||| |||||||||||||| || || |||||| || Sbjct: 522 ataaaacatgaaaccg---taagctctcaagcagtgggaggagacag---gctctgaacg 575 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 576 cgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag-----ggaa 630 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 631 cccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggaccc 690 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 691 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 750 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 751 aaccgactgatgttgaa 767
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 775 bits (391), Expect = 0.0 Identities = 516/557 (92%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 215 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 274 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| ||| |||||| ||||||||||||||||||||| |||||||| ||| Sbjct: 275 gtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagtcccgcaccccaga 334 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 335 tggtgagagtccagtagccgaaagcatcactagcttacgctctaacccgagtagcatggg 394 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 454 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 455 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 514 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| ||| |||||||||||| Sbjct: 515 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccg 571 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 572 cgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggga 626 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| | |||| ||||||||| ||||||||||| Sbjct: 627 cccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggaccc 686 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||| Sbjct: 687 gaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtccg 746 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 747 aaccgactgatgttgaa 763
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 773 bits (390), Expect = 0.0 Identities = 518/559 (92%), Gaps = 10/559 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86476 agcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 86535 Query: 61 gtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 118 |||||||||| |||| |||| |||||||||||||||||||||||||| | |||||||| Sbjct: 86536 gtgggagagcccaatataagctctgtgctgctaggcgaagcggttgagtcctgcacccta 86595 Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 178 ||||| | |||||||||||||||||||||| | ||||| ||||| |||||||||||||| Sbjct: 86596 gatggtgagagtccagtagccgaaagcatcattggcttacgctctaacccgagtagcatg 86655 Query: 179 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86656 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 86715 Query: 239 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 298 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 86716 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 86775 Query: 299 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 358 ||||||||| |||||||| | |||||||||||||||||||| || |||||||||| Sbjct: 86776 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaattagatctctgac 86832 Query: 359 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 418 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 86833 cgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaag-----gg 86887 Query: 419 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 478 ||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||| Sbjct: 86888 aacccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggac 86947 Query: 479 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 538 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 86948 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 87007 Query: 539 cgaaccgactgatgttgaa 557 ||||||||||||||||||| Sbjct: 87008 cgaaccgactgatgttgaa 87026
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 769 bits (388), Expect = 0.0 Identities = 516/557 (92%), Gaps = 10/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4445 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 4504 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||| ||||||||||||| | || || |||||||||| Sbjct: 4505 gtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctaga 4564 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4565 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 4624 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4625 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4684 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 4685 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaa 4744 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 4745 atagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccg 4799 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4800 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 4854 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 4855 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 4914 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| Sbjct: 4915 gaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccg 4974 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 4975 aaccgactgatgttgaa 4991
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 769 bits (388), Expect = 0.0 Identities = 516/557 (92%), Gaps = 10/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 23480 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 23421 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||| ||||||||||||| | || || |||||||||| Sbjct: 23420 gtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctaga 23361 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23360 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 23301 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 23241 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 23240 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaa 23181 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| | | | ||||||||| Sbjct: 23180 atagaacatgaaaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccg 23126 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23125 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 23071 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 23070 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 23011 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||| Sbjct: 23010 gaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccg 22951 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 22950 aaccgactgatgttgaa 22934
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 767 bits (387), Expect = 0.0 Identities = 520/560 (92%), Gaps = 12/560 (2%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131656 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 131597 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 118 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 131596 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 131537 Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 178 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131536 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 131477 Query: 179 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131476 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 131417 Query: 239 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 298 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 131416 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 131357 Query: 299 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 357 ||||||||| |||||||| | |||||||||||||||||||| || | || |||||| Sbjct: 131356 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctga 131301 Query: 358 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131300 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 131246 Query: 418 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 477 ||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 131245 gaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatgga 131186 Query: 478 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 537 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 131185 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 131126 Query: 538 ccgaaccgactgatgttgaa 557 |||||||||||||||||||| Sbjct: 131125 ccgaaccgactgatgttgaa 131106 Score = 767 bits (387), Expect = 0.0 Identities = 520/560 (92%), Gaps = 12/560 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103738 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 103797 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 118 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 103798 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 103857 Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 178 |||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103858 gatggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatg 103917 Query: 179 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103918 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 103977 Query: 239 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 298 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 103978 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 104037 Query: 299 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctga 357 ||||||||| |||||||| | |||||||||||||||||||| || | || |||||| Sbjct: 104038 aaatagaacatgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctga 104093 Query: 358 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104094 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----g 104148 Query: 418 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 477 ||| ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 104149 gaaaccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatgga 104208 Query: 478 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 537 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 104209 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 104268 Query: 538 ccgaaccgactgatgttgaa 557 |||||||||||||||||||| Sbjct: 104269 ccgaaccgactgatgttgaa 104288
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 767 bits (387), Expect = 0.0 Identities = 519/558 (93%), Gaps = 15/558 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 315 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-tt 373 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctag 119 ||||||||||||||||||||| |||||||||||||||| || || ||| ||||||||| Sbjct: 374 gtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctag 433 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 493 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 494 ggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctggg 553 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||| Sbjct: 554 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtga 612 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | | |||||||| Sbjct: 613 aatagaacatgaaaccg---taagctcccaagcagtgggaggcca----gggctctgacc 665 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 666 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----gga 720 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 721 acccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 780 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 781 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 840 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 841 gaaccgactgatgttgaa 858
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 761 bits (384), Expect = 0.0 Identities = 516/557 (92%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4714 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 4773 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || || |||||||||| Sbjct: 4774 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctaga 4833 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4834 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatggg 4893 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4894 gcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4953 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 4954 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaa 5013 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | ||||||||| |||||||||| | | | ||||||||| Sbjct: 5014 atagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccg 5067 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5068 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 5122 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5123 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 5182 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||| || | |||||||||| |||||||| Sbjct: 5183 gaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccg 5242 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 5243 aaccgactgatgttgaa 5259
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 761 bits (384), Expect = 0.0 Identities = 516/557 (92%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4714 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 4773 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || || |||||||||| Sbjct: 4774 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctaga 4833 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4834 tggtgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtaacatggg 4893 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4894 gcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4953 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 4954 gaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaa 5013 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | ||||||||| |||||||||| | | | ||||||||| Sbjct: 5014 atagaacatgaaaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccg 5067 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5068 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaa 5122 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5123 accaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggaccc 5182 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 |||||||||||||||||||||||||||||||||| || | |||||||||| |||||||| Sbjct: 5183 gaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccg 5242 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 5243 aaccgactgatgttgaa 5259
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 747 bits (377), Expect = 0.0 Identities = 383/385 (99%) Strand = Plus / Plus Query: 173 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 233 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 293 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 352 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 353 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 413 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 472 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300 Query: 473 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 360 Query: 533 gaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 361 gaggtccgaaccgactgatgttgaa 385
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 739 bits (373), Expect = 0.0 Identities = 514/558 (92%), Gaps = 11/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52472 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggtt 52413 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctag 119 |||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||||| Sbjct: 52412 gtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctag 52353 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 52352 atggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgg 52293 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52292 gacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 52233 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 | |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||| Sbjct: 52232 taaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtga 52173 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 52172 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 52118 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 52117 gcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----gga 52063 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 52062 acccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacc 52003 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 52002 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 51943 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 51942 gaaccgactgatgttgaa 51925 Score = 739 bits (373), Expect = 0.0 Identities = 514/558 (92%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37356 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggtt 37415 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctag 119 |||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||||| Sbjct: 37416 gtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctag 37475 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 37476 atggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgg 37535 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37536 gacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 37595 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 | |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||| Sbjct: 37596 taaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtga 37655 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 37656 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 37710 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 37711 gcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----gga 37765 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 37766 acccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacc 37825 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 37826 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 37885 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 37886 gaaccgactgatgttgaa 37903
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 739 bits (373), Expect = 0.0 Identities = 515/562 (91%), Gaps = 14/562 (2%) Strand = Plus / Minus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 61 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 128231 gcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttg 128172 Query: 62 tgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 115 |||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 128171 tgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcacc 128112 Query: 116 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 175 ||||||||| | |||||||||||||||||||||||||||| | ||||| |||| |||||| Sbjct: 128111 ctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagc 128052 Query: 176 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128051 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 127992 Query: 236 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 295 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| | Sbjct: 127991 tgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccatagggga 127932 Query: 296 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 355 |||||||||||| |||||||| | |||||||||||||||||||| ||| ||||||| Sbjct: 127931 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctct 127875 Query: 356 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 415 |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 127874 gaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag---- 127819 Query: 416 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 475 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| Sbjct: 127818 -ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatg 127760 Query: 476 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 535 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 127759 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggag 127700 Query: 536 gtccgaaccgactgatgttgaa 557 |||||||||||||||||||||| Sbjct: 127699 gtccgaaccgactgatgttgaa 127678 Score = 739 bits (373), Expect = 0.0 Identities = 515/562 (91%), Gaps = 14/562 (2%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 61 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 95216 gcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttg 95275 Query: 62 tgggagagc------aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacc 115 |||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 95276 tgggggagcgatacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcacc 95335 Query: 116 ctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagc 175 ||||||||| | |||||||||||||||||||||||||||| | ||||| |||| |||||| Sbjct: 95336 ctagatggcaagagtccagtagccgaaagcatcactagctcacgctctaacccaagtagc 95395 Query: 176 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95396 atggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcc 95455 Query: 236 tgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggta 295 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| | Sbjct: 95456 tgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccatagggga 95515 Query: 296 gtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctct 355 |||||||||||| |||||||| | |||||||||||||||||||| ||| ||||||| Sbjct: 95516 gtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaattggatctct 95572 Query: 356 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 415 |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 95573 gaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaag---- 95628 Query: 416 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 475 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| Sbjct: 95629 -ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatg 95687 Query: 476 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 535 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 95688 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggag 95747 Query: 536 gtccgaaccgactgatgttgaa 557 |||||||||||||||||||||| Sbjct: 95748 gtccgaaccgactgatgttgaa 95769
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 739 bits (373), Expect = 0.0 Identities = 514/558 (92%), Gaps = 11/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4284 agcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggtt 4343 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctag 119 |||||||||||||| ||| || ||||||||||||||| | | |||| ||| ||||||||| Sbjct: 4344 gtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctag 4403 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 4404 atggcgaaagtccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgg 4463 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4464 gacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 4523 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 | |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||| Sbjct: 4524 taaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtga 4583 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 4584 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 4638 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 4639 gcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag-----gga 4693 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||| Sbjct: 4694 acccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacc 4753 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 4754 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 4813 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 4814 gaaccgactgatgttgaa 4831
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 729 bits (368), Expect = 0.0 Identities = 512/558 (91%), Gaps = 9/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 146345 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 146286 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| ||||||| |||||||||||||||| ||||||| | | |||||||| Sbjct: 146285 gtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctaga 146226 Query: 121 tggctaaagtccagtagccgaaagcatcactagctt-atgctctgacccgagtagcatgg 179 ||| | |||||||||||||||||||||||| |||| |||||| ||||||||||||||| Sbjct: 146225 tggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtagcatgg 146166 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 146165 ggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 146106 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 146105 tgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtga 146046 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | ||||||||||||||||||| ||| |||| |||||| Sbjct: 146045 aatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgacc 145989 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| Sbjct: 145988 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----gga 145934 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 145933 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 145874 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 145873 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 145814 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 145813 gaaccgactgatgttgaa 145796 Score = 729 bits (368), Expect = 0.0 Identities = 512/558 (91%), Gaps = 9/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112117 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 112176 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| ||||||| |||||||||||||||| ||||||| | | |||||||| Sbjct: 112177 gtgggagagcaatataagcgttttgctgctaggcgaagcagttgagtcctgtaccctaga 112236 Query: 121 tggctaaagtccagtagccgaaagcatcactagctt-atgctctgacccgagtagcatgg 179 ||| | |||||||||||||||||||||||| |||| |||||| ||||||||||||||| Sbjct: 112237 tggtgagagtccagtagccgaaagcatcactggctttatgctccaacccgagtagcatgg 112296 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112297 ggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 112356 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 112357 tgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtga 112416 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | ||||||||||||||||||| ||| |||| |||||| Sbjct: 112417 aatagaacatgaaaccg---taggctcccaagcagtgggaggagaatcggatccctgacc 112473 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||| Sbjct: 112474 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----gga 112528 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 112529 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 112588 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 112589 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 112648 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 112649 gaaccgactgatgttgaa 112666
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 728 bits (367), Expect = 0.0 Identities = 511/557 (91%), Gaps = 9/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 115995 agcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-tt 115937 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 115936 gtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctaga 115877 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 115876 tggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggg 115817 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 115816 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 115757 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 115756 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 115697 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 115696 atagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccg 115640 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 115639 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggagc---- 115584 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 115583 -ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggaccc 115525 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 115524 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 115465 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 115464 aaccgactgatgttgaa 115448 Score = 728 bits (367), Expect = 0.0 Identities = 511/557 (91%), Gaps = 9/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct: 86125 agcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-tt 86183 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||| | | ||| |||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 86184 gtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctaga 86243 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| ||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 86244 tggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggg 86303 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86304 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 86363 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 86364 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 86423 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 86424 atagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgaccg 86480 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 86481 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggagc---- 86536 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 86537 -ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggaccc 86595 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 86596 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 86655 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 86656 aaccgactgatgttgaa 86672
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 728 bits (367), Expect = 0.0 Identities = 510/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4104 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 4163 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| ||| Sbjct: 4164 gtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccaga 4223 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||||||||| |||| |||| || | |||||||||||||||| Sbjct: 4224 tggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggg 4283 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4284 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 4343 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 4344 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 4403 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||||| Sbjct: 4404 atagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccg 4460 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct: 4461 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaa 4515 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 4516 ttcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggaccc 4575 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 4576 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 4635 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 4636 aaccgactgatgttgaa 4652
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 728 bits (367), Expect = 0.0 Identities = 510/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 214 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 273 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| ||| Sbjct: 274 gtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccaga 333 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||||||||| |||| |||| || | |||||||||||||||| Sbjct: 334 tggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggg 393 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 453 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 454 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 513 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||||| Sbjct: 514 atagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccg 570 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct: 571 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaa 625 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 626 ttcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggaccc 685 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 686 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 745 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 746 aaccgactgatgttgaa 762
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 728 bits (367), Expect = 0.0 Identities = 510/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 151031 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 150972 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| ||| Sbjct: 150971 gtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccaga 150912 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||||||||| |||| |||| || | |||||||||||||||| Sbjct: 150911 tggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggg 150852 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150851 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 150792 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 150791 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 150732 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||||| Sbjct: 150731 atagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccg 150675 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct: 150674 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaa 150620 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 150619 ttcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggaccc 150560 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 150559 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 150500 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 150499 aaccgactgatgttgaa 150483 Score = 728 bits (367), Expect = 0.0 Identities = 510/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117635 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 117694 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| ||| Sbjct: 117695 gtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccaga 117754 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||||||||| |||| |||| || | |||||||||||||||| Sbjct: 117755 tggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggg 117814 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117815 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 117874 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 117875 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 117934 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||||| Sbjct: 117935 atagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccg 117991 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct: 117992 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaa 118046 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 118047 ttcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggaccc 118106 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 118107 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 118166 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 118167 aaccgactgatgttgaa 118183
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 728 bits (367), Expect = 0.0 Identities = 510/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 214 agcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 273 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||||||||||||||| ||||| ||||||| | |||||| ||| Sbjct: 274 gtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagttctgcaccccaga 333 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||||||||| |||| |||| || | |||||||||||||||| Sbjct: 334 tggtgagagtccagtagccgaaagcaccactgtcttacactttaacccgagtagcatggg 393 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 453 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 454 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 513 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| ||||| || | |||| |||||||||| |||| ||| |||||||||||| Sbjct: 514 atagaacatgaaatcg---taagcttccaagcagtgagaggagaatcggatctctgaccg 570 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct: 571 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag-----ggaa 625 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 626 ttcaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggaccc 685 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 686 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 745 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 746 aaccgactgatgttgaa 762
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 724 bits (365), Expect = 0.0 Identities = 368/369 (99%) Strand = Plus / Plus Query: 189 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 249 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 309 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 369 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 429 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 488 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 489 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 360 Query: 549 gatgttgaa 557 ||||||||| Sbjct: 361 gatgttgaa 369
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 720 bits (363), Expect = 0.0 Identities = 509/557 (91%), Gaps = 8/557 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 215 agcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggtt 274 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||||| | |||||||| |||||||||||| ||||| | | ||||| |||| Sbjct: 275 gtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaatcctgcaccataga 334 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 335 tggtgagagtccagtagccgaaagcatcactagtttatgctctaacccgagtagcatggg 394 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 395 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggt 454 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 455 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaa 514 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||||||||||||||||||| ||| ||||||||||| Sbjct: 515 atagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccg 571 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||| Sbjct: 572 cgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----ggaa 626 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| Sbjct: 627 cccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggaccc 686 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 687 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 746 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 747 aaccgactgatgttgaa 763
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 718 bits (362), Expect = 0.0 Identities = 512/561 (91%), Gaps = 12/561 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 215 agcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggtt 274 Query: 61 gtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccc 116 ||||| |||| |||||| || ||| ||||||||||||||| ||||||| | |||||| Sbjct: 275 gtgggggagctatacaaataagcattgcgctgctaggcgaagcagttgagtcctgcaccc 334 Query: 117 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 176 |||||| | ||||||||| |||||||||| || | |||||||||| |||||||||||| Sbjct: 335 cagatggtgagagtccagtaaccgaaagcataacaatcttatgctctaacccgagtagca 394 Query: 177 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 454 Query: 237 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 296 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 455 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggag 514 Query: 297 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 356 ||||||||||| |||||||| | |||||||||||||||||||| ||| |||||||| Sbjct: 515 tgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcggatctctg 571 Query: 357 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 416 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 572 accgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaag----- 626 Query: 417 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 476 ||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||||| Sbjct: 627 ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatgg 686 Query: 477 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 687 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 746 Query: 537 tccgaaccgactgatgttgaa 557 ||||||||||||||||||||| Sbjct: 747 tccgaaccgactgatgttgaa 767
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 706 bits (356), Expect = 0.0 Identities = 508/557 (91%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 198 agcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggtt 257 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||| |||| | | |||| |||| ||||||||||||| ||||||| | |||||||||| Sbjct: 258 gtgggggagctaaagaagcattgtattgctaggcgaagcagttgagtcctgcaccctaga 317 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||| |||||||||| || ||||| ||||| ||||||||| |||||| Sbjct: 318 tggtgagagtccagtaaccgaaagcattacaagcttgggctctaacccgagtaacatggg 377 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 437 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 438 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaa 497 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| | |||| ||||||||||||||| ||| |||||||||||| Sbjct: 498 atagaacatgaaaccg---taagcttccaagcagtgggaggagaatcggatctctgaccg 554 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | | Sbjct: 555 cgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaaag--a 612 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 613 accaccggagccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggaccc 672 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 673 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 732 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 733 aaccgactgatgttgaa 749
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 700 bits (353), Expect = 0.0 Identities = 371/376 (98%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 184 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 364 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 421 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 422 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 481 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 122461 Query: 542 accgactgatgttgaa 557 |||||||||||||||| Sbjct: 122460 accgactgatgttgaa 122445 Score = 365 bits (184), Expect = 1e-97 Identities = 190/192 (98%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123255 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 123196 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123195 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 123136 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 123135 tggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtagcatggg 123076 Query: 181 gcacgtggaatc 192 |||||||||||| Sbjct: 123075 gcacgtggaatc 123064
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 700 bits (353), Expect = 0.0 Identities = 371/376 (98%), Gaps = 2/376 (0%) Strand = Plus / Minus Query: 184 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 244 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 304 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 364 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 421 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 422 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 481 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 12825002 Query: 542 accgactgatgttgaa 557 |||||||||||||||| Sbjct: 12825001 accgactgatgttgaa 12824986 Score = 365 bits (184), Expect = 1e-97 Identities = 190/192 (98%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825796 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 12825737 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825736 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 12825677 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 12825676 tggctaaagtccagtagccgaaagcatcactagcttacgctctgccccgagtagcatggg 12825617 Query: 181 gcacgtggaatc 192 |||||||||||| Sbjct: 12825616 gcacgtggaatc 12825605 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 129 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 188 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 690 bits (348), Expect = 0.0 Identities = 507/558 (90%), Gaps = 9/558 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117935 agcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggtt 117876 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 117875 gtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctaga 117816 Query: 121 tggctaaagtccagtagccgaaagcatcactag-cttatgctctgacccgagtagcatgg 179 ||| | |||||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 117815 tggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatgg 117756 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117755 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 117696 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 117695 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 117636 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 117635 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 117579 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 117578 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 117524 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 117523 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 117464 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 117463 cgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 117404 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 117403 gaaccgactgatgttgaa 117386 Score = 690 bits (348), Expect = 0.0 Identities = 507/558 (90%), Gaps = 9/558 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 90167 agcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggtt 90226 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 90227 gtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctaga 90286 Query: 121 tggctaaagtccagtagccgaaagcatcactag-cttatgctctgacccgagtagcatgg 179 ||| | |||||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 90287 tggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatgg 90346 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90347 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 90406 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 90407 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 90466 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 90467 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 90523 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 90524 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 90578 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 90579 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 90638 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 90639 cgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 90698 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 90699 gaaccgactgatgttgaa 90716
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 644 bits (325), Expect = 0.0 Identities = 503/558 (90%), Gaps = 12/558 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 214 agcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggtt 273 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcgg-ttgagtgccgcaccctag 119 |||||||||||||| |||||| ||||||||||||||||| | || | || ||||||||| Sbjct: 274 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctag 333 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||| | |||||||||||| || ||||||||||||||||||||| Sbjct: 334 atggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgg 393 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 453 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 | ||| |||| ||||||||||||||||||| ||||||||||||||| | |||| ||||| Sbjct: 454 taaccaatagtaaagtagtaccgtgagggaagggtgaaaagaacccc-attggggagtga 512 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| ||||||||| |||| ||||||||||||||| | || | |||||||| Sbjct: 513 aatagaacatgaaaccgta---agctaccaagcagtgggaggagccaggg--ctctgacc 567 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 568 gcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaagggaac--- 624 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||| Sbjct: 625 --ccaccggagccatagcgaaagcgagtattcataggactattgtcactgcttatggacc 682 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| Sbjct: 683 cgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtcc 742 Query: 540 gaaccgactgatgttgaa 557 |||||||||||||||||| Sbjct: 743 gaaccgactgatgttgaa 760
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 634 bits (320), Expect = e-179 Identities = 470/518 (90%), Gaps = 9/518 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2258 agcgattcccatagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggtt 2317 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||| | ||| ||||| ||||||||||||| ||||||| | |||||||||| Sbjct: 2318 gtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctaga 2377 Query: 121 tggctaaagtccagtagccgaaagcatcactag-cttatgctctgacccgagtagcatgg 179 ||| | |||||||||||||||||||| || | || ||||||| ||||||||||||||| Sbjct: 2378 tggtgagagtccagtagccgaaagcataacaacactcatgctctaacccgagtagcatgg 2437 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2438 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 2497 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 2498 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 2557 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 2558 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 2614 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 419 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 2615 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 2669 Query: 420 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 479 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 2670 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 2729 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagctt 517 ||||||||||||||||| |||||||||||||||||||| Sbjct: 2730 cgaacctgggtgatctaaccatgaccaggatgaagctt 2767
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 620 bits (313), Expect = e-174 Identities = 461/507 (90%), Gaps = 10/507 (1%) Strand = Plus / Minus Query: 50 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 109 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 110 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 169 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 170 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 230 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 289 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 290 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 349 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 350 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 409 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 410 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 469 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 470 c-ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 528 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagc-tggatgaaacta 5814 Query: 529 agcagaggtccgaaccgactgatgttg 555 || |||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttg 5787 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 48 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6362 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 6315
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 613 bits (309), Expect = e-172 Identities = 387/410 (94%), Gaps = 6/410 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 152 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 153 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 212 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 272 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 332 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 333 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 392 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 393 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 447 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 409 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 497
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 599 bits (302), Expect = e-168 Identities = 383/407 (94%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 343 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctag 119 ||||||||||||||||||||| ||||||||||||||||| | || ||| ||||||||| Sbjct: 342 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctag 283 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 179 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 atggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgg 223 Query: 180 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 239 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 222 ggcacgtggaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctggg 163 Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 162 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 103 Query: 300 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 359 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 102 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 48 Query: 360 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 406 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 1
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 593 bits (299), Expect = e-166 Identities = 302/303 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 273 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 333 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 334 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 393 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 453 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 513 Query: 301 ata 303 ||| Sbjct: 514 ata 516
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 585 bits (295), Expect = e-164 Identities = 298/299 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 187 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 247 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 248 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 307 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 367 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 426
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 553 bits (279), Expect = e-154 Identities = 326/341 (95%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 46466 agcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggtt 46525 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 46526 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctaga 46585 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46586 tggctagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 46645 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46646 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 46705 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 46706 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 46765 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46766 atagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 329 bits (166), Expect = 6e-87 Identities = 196/206 (95%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaa 47018
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 553 bits (279), Expect = e-154 Identities = 326/341 (95%), Gaps = 3/341 (0%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130321 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 130262 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 130261 gtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 130202 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130201 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 130142 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130141 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 130082 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 130081 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 130022 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 130021 atagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 553 bits (279), Expect = e-154 Identities = 326/341 (95%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102135 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 102194 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 102195 gtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctaga 102254 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102255 tggcgagagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 102314 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102315 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 102374 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 102375 gaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 102434 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 102435 atagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 313 bits (158), Expect = 3e-82 Identities = 194/206 (94%), Gaps = 5/206 (2%) Strand = Plus / Minus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaa 129769 Score = 313 bits (158), Expect = 3e-82 Identities = 194/206 (94%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaa 102687
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 551 bits (278), Expect = e-154 Identities = 492/561 (87%), Gaps = 13/561 (2%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 139056 agcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggtt 138997 Query: 61 gtgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 116 |||||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || Sbjct: 138996 gtgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcc 138938 Query: 117 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 176 ||| || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||| Sbjct: 138937 cagacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagca 138878 Query: 177 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 236 ||||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| || Sbjct: 138877 tggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttct 138818 Query: 237 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 296 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || Sbjct: 138817 gggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggag 138758 Query: 297 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 356 ||||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||| Sbjct: 138757 tgaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctg 138701 Query: 357 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 416 ||||||||||||||||||||||||||||||||| |||||| | ||| |||||||| Sbjct: 138700 accgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag----- 138646 Query: 417 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 476 |||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 138645 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 138586 Query: 477 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 536 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 138585 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 138526 Query: 537 tccgaaccgactgatgttgaa 557 ||||||||||||||||||||| Sbjct: 138525 tccgaaccgactgatgttgaa 138505 Score = 551 bits (278), Expect = e-154 Identities = 492/561 (87%), Gaps = 13/561 (2%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 ||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 82821 agcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggtt 82880 Query: 61 gtgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 116 |||||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || Sbjct: 82881 gtgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcc 82939 Query: 117 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 176 ||| || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||| Sbjct: 82940 cagacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagca 82999 Query: 177 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 236 ||||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| || Sbjct: 83000 tggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttct 83059 Query: 237 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 296 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| || Sbjct: 83060 gggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggag 83119 Query: 297 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 356 ||||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||| Sbjct: 83120 tgaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctg 83176 Query: 357 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 416 ||||||||||||||||||||||||||||||||| |||||| | ||| |||||||| Sbjct: 83177 accgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaag----- 83231 Query: 417 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 476 |||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||| Sbjct: 83232 ggaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgg 83291 Query: 477 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 536 ||||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||| Sbjct: 83292 acccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggagg 83351 Query: 537 tccgaaccgactgatgttgaa 557 ||||||||||||||||||||| Sbjct: 83352 tccgaaccgactgatgttgaa 83372
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 537 bits (271), Expect = e-149 Identities = 324/341 (95%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||| ||| |||||||| | |||||||||||||||||||| Sbjct: 522 ataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 246 bits (124), Expect = 7e-62 Identities = 160/172 (93%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 386 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 445 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 446 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 505 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 506 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 |||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaa 758
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 537 bits (271), Expect = e-149 Identities = 324/341 (95%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||| Sbjct: 462 gaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccgggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 297 bits (150), Expect = 2e-77 Identities = 192/206 (93%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaa 781
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 537 bits (271), Expect = e-149 Identities = 324/341 (95%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 276 bits (139), Expect = 7e-71 Identities = 192/207 (92%), Gaps = 7/207 (3%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 412 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 470 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 531 cagaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaa 781
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 531 bits (268), Expect = e-148 Identities = 354/380 (93%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 322 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||| Sbjct: 323 gtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctaga 382 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 383 tggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 442 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 502 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| Sbjct: 503 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaa 562 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgacc 359 ||||||| |||||||| | ||||||||||||| |||||| | || | |||||||| Sbjct: 563 atagaacatgaaaccg---taagctcccaagcagngggaggagcccaggg--ctctgacc 617 Query: 360 gcgtgcctgttgaagaatga 379 |||||||||||||||||||| Sbjct: 618 gcgtgcctgttgaagaatga 637
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 529 bits (267), Expect = e-147 Identities = 323/341 (94%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccgggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||||||| |||||||| | |||||||||||||||||||| Sbjct: 522 atagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 264 bits (133), Expect = 3e-67 Identities = 189/206 (91%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaa 781
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 529 bits (267), Expect = e-147 Identities = 323/341 (94%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | ||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 342 tggcgagagtccagtagccgaaagcatccctagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaa 521 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||| ||| |||||||| | |||||||||||||||||||| Sbjct: 522 ataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 266 bits (134), Expect = 7e-68 Identities = 189/206 (91%), Gaps = 6/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaa 780
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 502 bits (253), Expect = e-139 Identities = 325/347 (93%), Gaps = 4/347 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 281 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||| | || |||||| | |||||||| Sbjct: 282 gtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctaga 341 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 342 tggtgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 401 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 461 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||| Sbjct: 462 gaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaa 520 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 347 ||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 521 ataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564 Score = 240 bits (121), Expect = 4e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 417 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 476 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 477 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 537 tccgaaccgactgatgttgaa 557 ||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaa 742
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 490 bits (247), Expect = e-135 Identities = 482/557 (86%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||||| Sbjct: 144134 agcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggtt 144193 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||| || || | || | ||||||||||| ||||||||| |||||| ||| Sbjct: 144194 gtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccaga 144253 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||| ||| | |||||| | |||| |||| ||||||||||| Sbjct: 144254 tggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggg 144313 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||| || Sbjct: 144314 gcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagt 144373 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 144374 gaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaa 144433 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 144434 atagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccg 144490 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||| Sbjct: 144491 cgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaa 144549 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||| |||||||||||||||||||||||||| | |||| |||||||| |||||| |||| Sbjct: 144550 ccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaaccc 144608 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 144609 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 144668 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 144669 aaccgactgatgttgaa 144685 Score = 490 bits (247), Expect = e-135 Identities = 482/557 (86%), Gaps = 5/557 (0%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||| ||||||| |||| |||| ||||||||||||||| |||||||| Sbjct: 88717 agcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggtt 88658 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||| || || | || | ||||||||||| ||||||||| |||||| ||| Sbjct: 88657 gtgggagagtgatgagggcttcgttttactaggcgaagcagttgagtgctgcaccccaga 88598 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| | ||||||||||||| ||| | |||||| | |||| |||| ||||||||||| Sbjct: 88597 tggtgatagtccagtagccggaagtacagctagctcacgctccaacccaagtagcatggg 88538 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||| || Sbjct: 88537 gcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagt 88478 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 300 |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct: 88477 gaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaa 88418 Query: 301 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 360 ||||||| |||||||| ||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 88417 atagaacatgaaaccg---cgagctcccaagcagtgggaggagaatgagatctctaaccg 88361 Query: 361 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaa 420 ||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||| Sbjct: 88360 cgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaaggg-ggagaa 88302 Query: 421 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 480 ||| |||||||||||||||||||||||||| | |||| |||||||| |||||| |||| Sbjct: 88301 ccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaaccc 88243 Query: 481 gaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccg 540 ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct: 88242 gaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccg 88183 Query: 541 aaccgactgatgttgaa 557 ||||||||||||||||| Sbjct: 88182 aaccgactgatgttgaa 88166
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 484 bits (244), Expect = e-133 Identities = 247/248 (99%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 178 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 238 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 239 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 298 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 358 Query: 241 gaccgata 248 |||||||| Sbjct: 359 gaccgata 366
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 454 bits (229), Expect = e-124 Identities = 412/471 (87%), Gaps = 9/471 (1%) Strand = Plus / Plus Query: 87 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 146 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 147 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 206 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 207 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 266 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 267 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 326 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 327 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 386 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 387 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 446 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 447 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 506 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 654 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 712 Query: 507 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||||| |||||| ||| ||||||||||||||||||||||||| Sbjct: 713 ggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaa 763 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||||| Sbjct: 216 agcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggtt 275 Query: 61 gtgggagagc 70 |||||||||| Sbjct: 276 gtgggagagc 285
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 454 bits (229), Expect = e-124 Identities = 265/277 (95%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 250 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||| Sbjct: 251 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctaga 310 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 311 tggtgggagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 370 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 430 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaa 277 |||||||||||||||||||||||||||||| |||||| Sbjct: 431 gaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 446 bits (225), Expect = e-122 Identities = 411/471 (87%), Gaps = 9/471 (1%) Strand = Plus / Minus Query: 87 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 146 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 147 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 206 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 207 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 266 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 267 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 326 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 327 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 386 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 387 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 446 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 447 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 506 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 124611 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 124553 Query: 507 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||||| |||| | ||| ||||||||||||||||||||||||| Sbjct: 124552 ggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaa 124502 Score = 446 bits (225), Expect = e-122 Identities = 411/471 (87%), Gaps = 9/471 (1%) Strand = Plus / Plus Query: 87 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 146 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 147 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 206 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 207 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 266 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 267 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 326 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 327 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 386 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 387 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 446 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 447 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 506 || ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 95255 tc-taacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggcca 95313 Query: 507 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||||| |||| | ||| ||||||||||||||||||||||||| Sbjct: 95314 ggatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaa 95364 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||||| Sbjct: 125049 agcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggtt 124990 Query: 61 gtgggagagc 70 |||||||||| Sbjct: 124989 gtgggagagc 124980 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||||||||||||||| |||| |||||||||||| |||| ||||||| Sbjct: 94817 agcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggtt 94876 Query: 61 gtgggagagc 70 |||||||||| Sbjct: 94877 gtgggagagc 94886
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 444 bits (224), Expect = e-121 Identities = 273/287 (95%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 270 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| |||||||||||||||||||| || | | |||||||||| Sbjct: 271 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctaga 330 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 331 tggcgatagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 390 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 391 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggt 448 Query: 241 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 287 ||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 449 gaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 208 bits (105), Expect = 1e-50 Identities = 155/169 (91%), Gaps = 7/169 (4%) Strand = Plus / Plus Query: 392 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 450 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 451 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 508 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 509 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaa 777
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 440 bits (222), Expect = e-120 Identities = 352/393 (89%), Gaps = 8/393 (2%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 405 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 464 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 465 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 524 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 670 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 729 Query: 525 actaagcagaggtccgaaccgactgatgttgaa 557 | ||| ||||||||||||||||||||||||| Sbjct: 730 gccaagtggaggtccgaaccgactgatgttgaa 762 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 48 |||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 203 agcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 440 bits (222), Expect = e-120 Identities = 352/393 (89%), Gaps = 8/393 (2%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 405 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 464 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 465 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 524 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 683 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 742 Query: 525 actaagcagaggtccgaaccgactgatgttgaa 557 | ||| ||||||||||||||||||||||||| Sbjct: 743 gccaagtggaggtccgaaccgactgatgttgaa 775 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 48 |||||||||| ||||| |||||||||||||||| ||||||||||||| Sbjct: 216 agcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 434 bits (219), Expect = e-118 Identities = 352/393 (89%), Gaps = 10/393 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 406 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 464 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 465 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 524 ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 787 cactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaa 846 Query: 525 actaagcagaggtccgaaccgactgatgttgaa 557 | ||| ||||||||||||||||||||||||| Sbjct: 847 gccaagtggaggtccgaaccgactgatgttgaa 879 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 |||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 320 agcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 426 bits (215), Expect = e-116 Identities = 369/417 (88%), Gaps = 10/417 (2%) Strand = Plus / Plus Query: 141 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 200 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 201 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 260 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 261 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 320 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 321 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 380 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 381 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 440 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 441 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 500 ||| |||||| ||||||| | ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaacca 722 Query: 501 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||||| |||| |||||||||| ||||||||||||||||||||||||| Sbjct: 723 tgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaa 779 Score = 60.0 bits (30), Expect = 8e-06 Identities = 95/116 (81%), Gaps = 3/116 (2%) Strand = Plus / Plus Query: 5 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 64 |||||| |||||| ||||||||||| |||| |||||||||||| |||| |||||| | Sbjct: 213 attcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggtt---g 269 Query: 65 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 | |||||||| ||| ||||| |||||| |||||| || |||| | | |||||||| Sbjct: 270 gggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctaga 325
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 422 bits (213), Expect = e-115 Identities = 234/241 (97%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 186 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 120 ||||||||||||||||||||| ||||||||||||||||| || || ||| |||||||||| Sbjct: 185 gtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctaga 126 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 125 tggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 66 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 6 Query: 241 g 241 | Sbjct: 5 g 5
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 126 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 185 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 186 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 246 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 305 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 306 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 365 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 366 ctgttgaagaatgagccggcgactcataggcagtggcttg 405 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 61 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 62 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 120 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 121 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 241 gaccgata 248 |||||||| Sbjct: 241 gaccgata 248
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 383 bits (193), Expect = e-103 Identities = 385/447 (86%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 111 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 170 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 171 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 230 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 231 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 290 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 291 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 350 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 351 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 410 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 411 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 470 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 4725 Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 4726 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 4785 Query: 531 cagaggtccgaaccgactgatgttgaa 557 ||||||| ||||||| ||||||||| Sbjct: 4786 tggaggtccaaaccgaccgatgttgaa 4812 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 44 |||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4248 agcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 383 bits (193), Expect = e-103 Identities = 385/447 (86%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 111 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 170 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 171 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 230 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 231 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 290 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 291 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 350 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 351 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 410 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 411 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 470 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 693 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 752 Query: 531 cagaggtccgaaccgactgatgttgaa 557 ||||||| ||||||| ||||||||| Sbjct: 753 tggaggtccaaaccgaccgatgttgaa 779 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 44 |||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 215 agcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 383 bits (193), Expect = e-103 Identities = 385/447 (86%), Gaps = 4/447 (0%) Strand = Plus / Plus Query: 111 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 170 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 171 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 230 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 231 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 290 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 291 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 350 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 351 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 410 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 411 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 470 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactgt 692 Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 |||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| Sbjct: 693 ctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaag 752 Query: 531 cagaggtccgaaccgactgatgttgaa 557 ||||||| ||||||| ||||||||| Sbjct: 753 tggaggtccaaaccgaccgatgttgaa 779 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 44 |||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 215 agcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 381 bits (192), Expect = e-102 Identities = 345/392 (88%), Gaps = 8/392 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 406 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 465 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 669 Query: 466 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 525 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 670 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 729 Query: 526 ctaagcagaggtccgaaccgactgatgttgaa 557 || || || |||||||||||| ||||||||| Sbjct: 730 ctcagtggaagtccgaaccgaccgatgttgaa 761 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 203 agcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 381 bits (192), Expect = e-102 Identities = 345/392 (88%), Gaps = 8/392 (2%) Strand = Plus / Minus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 406 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 465 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 114993 Query: 466 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 525 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 114992 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 114933 Query: 526 ctaagcagaggtccgaaccgactgatgttgaa 557 || || || |||||||||||| ||||||||| Sbjct: 114932 ctcagtggaagtccgaaccgaccgatgttgaa 114901 Score = 381 bits (192), Expect = e-102 Identities = 345/392 (88%), Gaps = 8/392 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 406 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 465 ||||| || || || ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgtc 86995 Query: 466 actgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaa 525 |||| ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||| Sbjct: 86996 actgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaa 87055 Query: 526 ctaagcagaggtccgaaccgactgatgttgaa 557 || || || |||||||||||| ||||||||| Sbjct: 87056 ctcagtggaagtccgaaccgaccgatgttgaa 87087 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115460 agcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86528 agcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 375 bits (189), Expect = e-100 Identities = 273/299 (91%), Gaps = 9/299 (3%) Strand = Plus / Plus Query: 259 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 318 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 319 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 378 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 379 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 438 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 439 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 498 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 499 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaa 290
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 361 bits (182), Expect = 2e-96 Identities = 185/186 (99%) Strand = Plus / Plus Query: 372 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 432 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 491 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 492 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 552 gttgaa 557 |||||| Sbjct: 182 gttgaa 187
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 359 bits (181), Expect = 6e-96 Identities = 184/185 (99%) Strand = Plus / Plus Query: 373 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 433 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 492 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 493 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 553 ttgaa 557 ||||| Sbjct: 181 ttgaa 185
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 111 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 170 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 171 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 230 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 231 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 290 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 291 gggtagtgaaatagaacgtgaaaccgt 317 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 353 bits (178), Expect = 4e-94 Identities = 337/388 (86%), Gaps = 9/388 (2%) Strand = Plus / Plus Query: 170 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 229 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 230 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 289 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 290 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 349 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaaccata---agctttcaagcagtgggaggaggattga 561 Query: 350 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 409 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 410 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 469 |||||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 agggaat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675 Query: 470 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 529 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || Sbjct: 676 tttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaa 735 Query: 530 gcagaggtccgaaccgactgatgttgaa 557 | ||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaa 763 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| ||||| ||||||||||| |||| |||||||||||| |||| ||||||| Sbjct: 216 agcgattccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggtt 275 Query: 61 gtggga 66 |||||| Sbjct: 276 gtggga 281
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 351 bits (177), Expect = 2e-93 Identities = 340/393 (86%), Gaps = 11/393 (2%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 405 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 464 ||||||| ||| || ||||||||||||||||| |||| | || |||| ||| Sbjct: 574 ggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatgt 625 Query: 465 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 524 ||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| Sbjct: 626 cactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaa 685 Query: 525 actaagcagaggtccgaaccgactgatgttgaa 557 | ||| ||||||||||||||||||||||||| Sbjct: 686 gccaagtggaggtccgaaccgactgatgttgaa 718 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 170 agcgattccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 349 bits (176), Expect = 6e-93 Identities = 269/297 (90%), Gaps = 11/297 (3%) Strand = Plus / Plus Query: 261 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 320 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 321 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 380 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 381 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 440 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 441 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 500 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 501 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaa 286
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 343 bits (173), Expect = 4e-91 Identities = 344/399 (86%), Gaps = 4/399 (1%) Strand = Plus / Plus Query: 159 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 218 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 219 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 278 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 279 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 338 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 339 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 398 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 399 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 458 ||||| ||||||||||| | ||| |||||| |||||||||| |||||| ||||| Sbjct: 617 tggctgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcagggc 675 Query: 459 gattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttg 518 |||||||||| |||||||||||||| |||||||||| ||||| ||||||||||||||| Sbjct: 676 tattgtcactgtctatggacccgaacccgggtgatctaaccatggccaggatgaagcttg 735 Query: 519 gatgaaactaagcagaggtccgaaccgactgatgttgaa 557 | |||||||||| ||||||| ||||||| ||||||||| Sbjct: 736 ggtgaaactaagtggaggtcccaaccgaccgatgttgaa 774 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 13 agtagcggcgagcgaaatgggagcagcctaaa 44 ||||||||||||||||||||||| |||||||| Sbjct: 228 agtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 333 bits (168), Expect = 4e-88 Identities = 380/446 (85%), Gaps = 11/446 (2%) Strand = Plus / Plus Query: 113 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccgag 171 ||||||||||| | |||||||||| |||| |||| ||||||||||| | | |||||| Sbjct: 319 accctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccgag 378 Query: 172 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 231 ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 379 tagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaata 438 Query: 232 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 291 ||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 439 ctcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccattg 498 Query: 292 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 351 || |||||| |||||| ||||| | | ||| ||||||||||||||| || || | Sbjct: 499 gggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg-- 553 Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 532 agaggtccgaaccgactgatgttgaa 557 | |||| |||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaa 754
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 260 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 319 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 320 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 379 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 380 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 329 bits (166), Expect = 6e-87 Identities = 196/206 (95%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaa 262
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 329 bits (166), Expect = 6e-87 Identities = 196/206 (95%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaa 246
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 313 bits (158), Expect = 3e-82 Identities = 240/264 (90%), Gaps = 10/264 (3%) Strand = Plus / Plus Query: 295 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 354 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 415 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 473 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 474 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 533 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 534 aggtccgaaccgactgatgttgaa 557 |||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaa 364944 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 313 bits (158), Expect = 3e-82 Identities = 195/206 (94%), Gaps = 6/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 532 agaggtccgaaccgactgatgttgaa 557 |||||||| |||||||||||||||| Sbjct: 177580 ggaggtccg-accgactgatgttgaa 177604 Score = 230 bits (116), Expect = 4e-57 Identities = 156/168 (92%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 177245 agcgattcccgtagtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggtt 177304 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctag 119 ||||||||||||||||||||| |||| |||||||||||| | || ||| ||||||||| Sbjct: 177305 gtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctag 177364 Query: 120 atggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 167 ||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177365 atggcgaaagtccagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 240 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 311 bits (157), Expect = 1e-81 Identities = 334/393 (84%), Gaps = 10/393 (2%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 405 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 464 ||||||||| | |||| |||||||||||||||||||| | |||||| ||| Sbjct: 1021 ggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatgt 1073 Query: 465 cactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaa 524 ||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| Sbjct: 1074 cactgtttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaa 1133 Query: 525 actaagcagaggtccgaaccgactgatgttgaa 557 | ||| |||| |||||||||||| ||||||| Sbjct: 1134 gccaagtggaggcccgaaccgactggtgttgaa 1166 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 48 |||||||||| |||||| ||||||||||| |||| ||||||||||||| Sbjct: 616 agcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 303 bits (153), Expect = 3e-79 Identities = 300/345 (86%), Gaps = 13/345 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 406 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gatt 462 ||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaatg 660 Query: 463 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 507 |||||| |||||||||||||||| || ||||||||||||| |||| Sbjct: 661 gtcacttcttatggacccgaaccgggatgatctatccatggccag 705 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaa 28 ||||||| || ||||||||||||||||| Sbjct: 195 agcgatttccttagtagcggcgagcgaa 222
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 291 bits (147), Expect = 1e-75 Identities = 196/210 (93%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2814 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 2873 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 118 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 2874 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 2933 Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 178 |||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 2934 gatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagcata 2992 Query: 179 gggcacgtggaatcccgtgtgaatcagcaa 208 |||||||||||||||||||||||||||||| Sbjct: 2993 gggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 291 bits (147), Expect = 1e-75 Identities = 196/210 (93%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 1128 Query: 61 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcacccta 118 |||||||||| ||||||| || ||||||||||||||||| | ||| ||| |||||||| Sbjct: 1129 gtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcacccta 1188 Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 178 |||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 1189 gatggcgagagtccagtagccgaaagcatcact-gcttacgctctgacccgagtagcata 1247 Query: 179 gggcacgtggaatcccgtgtgaatcagcaa 208 |||||||||||||||||||||||||||||| Sbjct: 1248 gggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 177 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 178 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 237 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 238 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 297 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 298 gaaatagaacgtgaaaccgtgctgagctcc 327 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 177 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 178 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 237 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 238 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 297 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 298 gaaatagaacgtgaaaccgtgctgagctcc 327 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 177 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 178 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 237 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 238 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 297 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 298 gaaatagaacgtgaaaccgtgctgagctcc 327 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 375 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 434 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 435 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 492 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9056638 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9056697 Query: 493 tctatccatgaccaggat 510 | |||||||||| ||||| Sbjct: 9056698 tttatccatgactaggat 9056715 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 320 tgagctcccaagcagtgggaggggaaagtgatc 352 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 119 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 177 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 178 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 237 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 238 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 297 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 298 gaaatagaacgtgaaaccgtgctgagctcc 327 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 54.0 bits (27), Expect = 5e-04 Identities = 111/138 (80%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 375 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 434 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 435 agcgaaagcgagtcttaatagggcgattgtcactgcttatg--gacccgaacctgggtga 492 ||||||||||| |||||||||| | ||| ||||| |||| | || |||||| | ||||| Sbjct: 9128335 agcgaaagcgactcttaataggacaattttcactacttacggagatccgaacttaggtga 9128394 Query: 493 tctatccatgaccaggat 510 | |||||||||| ||||| Sbjct: 9128395 tttatccatgactaggat 9128412 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 320 tgagctcccaagcagtgggaggggaaagtgatc 352 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 287 bits (145), Expect = 2e-74 Identities = 337/395 (85%), Gaps = 12/395 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 284 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 405 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc--gatt 462 ||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| || Sbjct: 590 ggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatc 645 Query: 463 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 522 |||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 646 gtcactttttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 705 Query: 523 aaactaagcagaggtccgaaccgactgatgttgaa 557 |||| ||| ||||||||||||||| ||||||||| Sbjct: 706 aaaccaagtggaggtccgaaccgaccgatgttgaa 740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 45 ||||||||| |||||||||||||||||| |||| |||||||||| Sbjct: 114 gcgattcccctagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 406 gttaagg 412 ||||||| Sbjct: 644 gttaagg 650 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 463 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 515 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 13 agtagcggcgagcgaaatgggagcagcctaaac 45 ||||||||||||||||| || | |||||||||| Sbjct: 215 agtagcggcgagcgaaacggaatcagcctaaac 247
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 270 bits (136), Expect = 5e-69 Identities = 199/220 (90%) Strand = Plus / Minus Query: 4 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtg 63 ||||||||||||| || |||| ||||||||||||||||||||||| |||| | ||||||| Sbjct: 3597 gattcccgtagtaacgacgagtgaaatgggagcagcctaaaccgtaaaaatgaggttgtg 3538 Query: 64 ggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 123 |||||||||| ||| ||| |||| ||||||| ||||||| ||||| ||||||||||||| Sbjct: 3537 ggagagcaatgcaaacgtagtgccgctaggcaaagcggtggagtgttgcaccctagatgg 3478 Query: 124 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 183 | | ||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 3477 cgagagtttagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggca 3418 Query: 184 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 223 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 3417 cgtggaatcccgtgtgaattagcaaggaccaccttgcaag 3378 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 472 tatggacccgaacct 486 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 232 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 291 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 292 ggtagtgaaatagaacgtgaaacc 315 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 505 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||||| ||||||| |||||||||| ||||||||||| ||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaa 3059
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 268 bits (135), Expect = 2e-68 Identities = 190/207 (91%), Gaps = 6/207 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 410 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 411 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 470 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 531 cagaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaa 221
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 4e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 160 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 219 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 220 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 279 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 280 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 339 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 340 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 399 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 400 ggcttggttaagg 412 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 544 cgactgatgttgaa 557 |||||| ||||||| Sbjct: 712 cgactggtgttgaa 725 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||| || |||||| ||||||||||| || | ||||||||||| Sbjct: 173 agcgatttccttagtagtggcgagcgaaacggaatcagcctaaacc 218
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 406 gttaagg 412 ||||||| Sbjct: 611 gttaagg 617 Score = 93.7 bits (47), Expect = 6e-16 Identities = 89/103 (86%) Strand = Plus / Plus Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaac 526 || |||||||||| ||||| |||||| ||||||||| |||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaac 726 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 204 gcgattcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 240 bits (121), Expect = 4e-60 Identities = 136/141 (96%) Strand = Plus / Plus Query: 417 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 476 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 477 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 536 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 537 tccgaaccgactgatgttgaa 557 ||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaa 145
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 94 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 153 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 154 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 213 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 214 accttgcaaggctaaatactcctgggtgaccga 246 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 710 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 769 Query: 547 ctgatgttgaa 557 | ||||||||| Sbjct: 770 ccgatgttgaa 780 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 |||||||||| |||||||||||||| || |||| |||||||||||| Sbjct: 203 agcgattccctgagtagcggcgagcggaaagggaacagcctaaaccg 249
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 109 bits (55), Expect = 1e-20 Identities = 112/131 (85%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||| || |||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| | |||| ||| || | ||||||||| Sbjct: 2479 gggtgatctaaccatggccaggatgaagcttgggtaaaacgaagtggaagaccgaaccga 2538 Query: 547 ctgatgttgaa 557 | ||||||||| Sbjct: 2539 ccgatgttgaa 2549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 |||||||||| |||||||||||||| || |||| |||||||||||| Sbjct: 1969 agcgattccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 236 bits (119), Expect = 6e-59 Identities = 183/203 (90%), Gaps = 6/203 (2%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 414 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 415 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 474 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 475 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 534 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 535 ggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaa 763 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 170 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 229 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 230 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 289 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 290 tgggtagtgaaatagaacgtgaaacc 315 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||| Sbjct: 216 agcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggtt 275 Query: 61 gtgggaga 68 |||||||| Sbjct: 276 gtgggaga 283
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 236 bits (119), Expect = 6e-59 Identities = 183/203 (90%), Gaps = 6/203 (2%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 414 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 415 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 474 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 475 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 534 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 535 ggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaa 3797 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 170 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 229 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 230 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 289 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 290 tgggtagtgaaatagaacgtgaaacc 315 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||| Sbjct: 3250 agcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggtt 3309 Query: 61 gtgggaga 68 |||||||| Sbjct: 3310 gtgggaga 3317
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 113 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 172 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 173 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 232 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 233 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 292 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 293 gtagtgaaatagaacgtgaaa 313 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 208 bits (105), Expect = 1e-50 Identities = 182/206 (88%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaa 766 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 12 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 61 |||||| |||||| |||| |||| |||||||||||| |||| ||||||| Sbjct: 222 tagtagtggcgagtgaaaagggaacagcctaaaccgctaaaatggggttg 271
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 308 gtgaaa 313 ||||| Sbjct: 503 atgaaa 508 Score = 89.7 bits (45), Expect = 9e-15 Identities = 167/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| || |||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaa 741
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 468 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 527 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 528 aagcagaggtccgaaccgactgatgttgaa 557 ||| ||||||||||| ||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaa 742 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 gg 413 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 308 gtgaaa 313 ||||| Sbjct: 503 atgaaa 508 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaa 741
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 1e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 343 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 344 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 403 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 404 tggttaagg 412 ||||||||| Sbjct: 621 tggttaagg 629 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 217 gcgattcccgtagtagcggcgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 463 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 507 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 1e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 343 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 344 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 403 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 404 tggttaagg 412 ||||||||| Sbjct: 621 tggttaagg 629 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 217 gcgattcccgtagtagcggcgagcgaaccgggatcagcctaaacc 261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 463 gtcactgcttatggacccgaacctgggtgatctatccatgaccag 507 |||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaacccgggtgatctaatcatgaccag 727
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 2e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 463 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaag 514 |||||| ||||||||||||||||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaacctggatgatctaaccatgagcatgatgaag 857 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatggga 34 |||||||||| ||||||||||||||||||||||| Sbjct: 203 agcgattcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccg 316 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgact 389 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 435 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 492 ||||||||||||||| |||||||| | |||| | |||| ||||||||||| || || Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaacccggtcga 932 Query: 493 tctatccatgaccaggatgaagct 516 |||| ||||| ||||||||||||| Sbjct: 933 tctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 128 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 187 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 188 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 247 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 248 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 307 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 308 gtgaaa 313 ||||| Sbjct: 504 atgaaa 509 Score = 97.6 bits (49), Expect = 4e-17 Identities = 168/206 (81%), Gaps = 5/206 (2%) Strand = Plus / Plus Query: 352 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 411 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 412 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 471 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 532 agaggtccgaaccgactgatgttgaa 557 ||||||||||| ||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaa 742
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 470 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 529 |||| ||||||||||| || |||||| ||||| |||||||||||||||| | | ||||| Sbjct: 1030 cttacggacccgaacccggtcgatctaaccatgtccaggatgaagcttgggtaacactaa 1089 Query: 530 gcagaggtccgaaccgactgatgttgaa 557 | |||||||| |||||| ||||||||| Sbjct: 1090 gtagaggtcccgaccgaccgatgttgaa 1117 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgact 389 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 agcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 474 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 533 |||||||||||| |||||||||| ||||||||||||||||||||| | | |||||| | Sbjct: 712 tggacccgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacactaagtgg 771 Query: 534 aggtccgaaccgactgatgttgaa 557 |||||||||||||| ||||||||| Sbjct: 772 aggtccgaaccgaccgatgttgaa 795 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 353 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 agcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 245 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 436 gcgaaagcgagtcttaatagggcga 460 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 343 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 344 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 401 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 81.8 bits (41), Expect = 2e-12 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgatt---gtcactgcttatggaccc 480 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 481 gaacctgggtgatctatccatgaccag 507 ||||| ||||||||||| ||||||||| Sbjct: 745 gaacccgggtgatctattcatgaccag 771 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 198 gcgattcccgtagtagtggcgagcgaaccgggaacagcctaaacc 242
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 9e-49 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 284 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 405 ggttaagg 412 |||||||| Sbjct: 675 ggttaagg 682 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/97 (85%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 482 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 483 acctgggtgatctatccatgaccaggatgaagcttgg 519 ||| |||||||||| | |||||||||||||| |||| Sbjct: 751 acccgggtgatctaatcctgaccaggatgaagtttgg 787 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 196 agcgattcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 285 cc 286 || Sbjct: 493 cc 494 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 356 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 462 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 517 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 205 gcgattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 170 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 229 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 230 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 289 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 290 tgggtagtgaaatagaacgtgaaacc 315 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 60 |||||||||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||| Sbjct: 1983 agcgattcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggtt 2042 Query: 61 gtggga 66 |||||| Sbjct: 2043 gtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 3e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 284 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 285 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 343 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 344 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 403 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 404 tggttaagg 412 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 3e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 284 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 285 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 343 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 344 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 403 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 404 tggttaagg 412 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 103 bits (52), Expect = 6e-19 Identities = 115/135 (85%), Gaps = 2/135 (1%) Strand = Plus / Minus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 482 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 483 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 542 |||||| ||||||| |||| ||||| |||||||||| | | || ||| |||| ||||| Sbjct: 155526 acctggatgatctaatcatggccaggttgaagcttgggtaacaccaagtcgaggaccgaa 155467 Query: 543 ccgactgatgttgaa 557 ||||| ||||||||| Sbjct: 155466 ccgaccgatgttgaa 155452 Score = 103 bits (52), Expect = 6e-19 Identities = 115/135 (85%), Gaps = 2/135 (1%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 482 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 483 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 542 |||||| ||||||| |||| ||||| |||||||||| | | || ||| |||| ||||| Sbjct: 78366 acctggatgatctaatcatggccaggttgaagcttgggtaacaccaagtcgaggaccgaa 78425 Query: 543 ccgactgatgttgaa 557 ||||| ||||||||| Sbjct: 78426 ccgaccgatgttgaa 78440 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156083 agcgattcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77809 agcgattcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 226 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 342 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 343 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 403 tt 404 || Sbjct: 636 tt 637 Score = 105 bits (53), Expect = 2e-19 Identities = 107/124 (86%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 436 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 493 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 494 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 553 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 786 Query: 554 tgaa 557 |||| Sbjct: 787 tgaa 790 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaa 28 ||||||||||||||||||||||||||| Sbjct: 215 gcgattcccgtagtagcggcgagcgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 112/133 (84%), Gaps = 2/133 (1%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 484 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 485 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 544 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 545 gactgatgttgaa 557 ||| ||||||||| Sbjct: 938 gaccgatgttgaa 950 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 196 agcgattcccgtagtagcggcgagcgaactgggactagcctaaacc 241
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 131 bits (66), Expect = 3e-27 Identities = 118/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 483 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 544 cgactgatgttgaa 557 |||| ||||||||| Sbjct: 768 cgaccgatgttgaa 781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 403 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 45 |||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 216 gcgattcccgtagtagtggcgagcgaactgggaacagcctaaac 259
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 123 bits (62), Expect = 7e-25 Identities = 118/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 820 Query: 542 accgactgatgttgaa 557 |||||| ||||||||| Sbjct: 821 accgaccgatgttgaa 836 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 216 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 260
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 410 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 195 agcgattcccgtagtagcggcgagcgaaacgggaacagcctaaacc 240 Score = 61.9 bits (31), Expect = 2e-06 Identities = 74/88 (84%), Gaps = 4/88 (4%) Strand = Plus / Plus Query: 436 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaacctgggtg 491 |||||||||||||| || |||||| |||||||| ||| |||||||||||| |||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaacccaggtg 732 Query: 492 atctatccatgaccaggatgaagcttgg 519 ||||| |||||||||| |||||||||| Sbjct: 733 atctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 226 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 342 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 343 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 403 tt 404 || Sbjct: 617 tt 618 Score = 105 bits (53), Expect = 2e-19 Identities = 107/124 (86%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 436 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 493 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 707 Query: 494 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 553 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 708 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 767 Query: 554 tgaa 557 |||| Sbjct: 768 tgaa 771 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaa 28 ||||||||||||||||||||||||||| Sbjct: 196 gcgattcccgtagtagcggcgagcgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 123 bits (62), Expect = 7e-25 Identities = 118/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Minus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 151680 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 151621 Query: 542 accgactgatgttgaa 557 |||||| ||||||||| Sbjct: 151620 accgaccgatgttgaa 151605 Score = 123 bits (62), Expect = 7e-25 Identities = 118/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 42523 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 42582 Query: 542 accgactgatgttgaa 557 |||||| ||||||||| Sbjct: 42583 accgaccgatgttgaa 42598 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 152165 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 152121 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 42038 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 42082
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 226 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 342 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 343 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 403 tt 404 || Sbjct: 636 tt 637 Score = 105 bits (53), Expect = 2e-19 Identities = 107/124 (86%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 436 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtgat 493 |||||||||||||| ||||||||| || |||| | | | |||||||||||| ||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaacccgggtgat 726 Query: 494 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 553 ||| ||||||||||||||||||||| | | |||||| ||||||||||||||| ||||| Sbjct: 727 ctaatcatgaccaggatgaagcttgggtaacactaagtggaggtccgaaccgaccgatgt 786 Query: 554 tgaa 557 |||| Sbjct: 787 tgaa 790 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaa 28 ||||||||||||||||||||||||||| Sbjct: 215 gcgattcccgtagtagcggcgagcgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 123 bits (62), Expect = 7e-25 Identities = 118/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 761 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 820 Query: 542 accgactgatgttgaa 557 |||||| ||||||||| Sbjct: 821 accgaccgatgttgaa 836 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 216 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 260
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 131 bits (66), Expect = 3e-27 Identities = 118/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 483 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 544 cgactgatgttgaa 557 |||| ||||||||| Sbjct: 768 cgaccgatgttgaa 781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 403 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 45 |||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 216 gcgattcccgtagtagtggcgagcgaactgggaacagcctaaac 259
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 123 bits (62), Expect = 7e-25 Identities = 118/136 (86%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||| ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||| Sbjct: 695 aacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccga 754 Query: 542 accgactgatgttgaa 557 |||||| ||||||||| Sbjct: 755 accgaccgatgttgaa 770 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 210 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 254
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/96 (87%), Gaps = 4/96 (4%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 482 aacctgggtgatctatccatgaccaggatgaagctt 517 |||| ||||||||||| |||| || ||||||||||| Sbjct: 780 aacccgggtgatctattcatggcc-ggatgaagctt 814 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 295 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 339
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 5e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 169 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 228 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 229 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 288 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 289 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 348 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 349 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 397 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 438 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 497 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 498 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 557 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 286 ccagtgggtagtgaaatagaacgtgaaacc 315 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 95.6 bits (48), Expect = 1e-16 Identities = 114/135 (84%), Gaps = 2/135 (1%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 482 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 483 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 542 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 543 ccgactgatgttgaa 557 ||||| ||||||||| Sbjct: 741 ccgaccgatgttgaa 755 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgact 389 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||| ||||| |||||||||||||||| | ||||||||| Sbjct: 196 gcgattccctgagtagtggcgagcgaaatgggaacggcctaaacc 240
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 274 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 333 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 334 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 383 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 286 ccagtgggtagtgaaatagaacgtgaaacc 315 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 95.6 bits (48), Expect = 1e-16 Identities = 114/135 (84%), Gaps = 2/135 (1%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 482 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 483 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 542 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 543 ccgactgatgttgaa 557 ||||| ||||||||| Sbjct: 25550 ccgaccgatgttgaa 25564 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgact 389 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 25005 gcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 25049
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 8e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 169 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 228 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 229 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 288 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 289 gtgggtagtgaaatagaacgtgaaaccgt 317 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 105 bits (53), Expect = 2e-19 Identities = 113/133 (84%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 484 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 485 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 544 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 545 gactgatgttgaa 557 ||||||||||||| Sbjct: 369 gactgatgttgaa 381 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 362 gtgcctgttgaagaatgagccggcgactcatagg 395 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 8e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 284 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 344 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 389 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 195 agcgattcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 ||||||||||||||| |||||||||| | | ||||||||||| |||| | | || || Sbjct: 804 ttatggacccgaacccgggtgatctaatcctttccaggatgaagtttgggtcacaccaaa 863 Query: 531 cagaggtccgaaccgactgatgttgaa 557 ||||||||||||||||||||||||| Sbjct: 864 tggaggtccgaaccgactgatgttgaa 890
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 131 bits (66), Expect = 3e-27 Identities = 119/136 (87%), Gaps = 3/136 (2%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 481 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 482 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 541 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 542 accgactgatgttgaa 557 |||||| ||||||||| Sbjct: 764 accgaccgatgttgaa 779 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 198 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 242
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 3e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 346 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 405 ggttaagg 412 |||||||| Sbjct: 800 ggttaagg 807 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%), Gaps = 5/138 (3%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 479 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 480 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 539 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 540 gaaccgactgatgttgaa 557 |||||||| ||||||||| Sbjct: 936 gaaccgaccgatgttgaa 953 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 195 gcgattcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 127 bits (64), Expect = 4e-26 Identities = 115/131 (87%), Gaps = 2/131 (1%) Strand = Plus / Plus Query: 429 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 486 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 547 ctgatgttgaa 557 | ||||||||| Sbjct: 776 ccgatgttgaa 786 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 413 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 216 gcgattcccgtagtagcggcgagcgaaccgggaacagcctaaacc 260
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 484 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 485 ctgggtgatctatccatgaccaggatgaagcttgg 519 | |||||||||| |||||||||||||||||||||| Sbjct: 170814 ccgggtgatctaaccatgaccaggatgaagcttgg 170780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 484 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 485 ctgggtgatctatccatgaccaggatgaagcttgg 519 | |||||||||| |||||||||||||||||||||| Sbjct: 122112 ccgggtgatctaaccatgaccaggatgaagcttgg 122146 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171302 gcgattcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121624 gcgattcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 341 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 425 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 484 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 485 ctgggtgatctatccatgaccaggatgaagcttgg 519 | |||||||||| |||||||||||||||||||||| Sbjct: 703 ccgggtgatctaaccatgaccaggatgaagcttgg 737 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| ||||||||||||||| | |||| |||||||||||| Sbjct: 215 gcgattcccccagtagcggcgagcgacaagggatcagcctaaaccg 260
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 284 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 285 cccagtgggtagtgaaatagaacgtgaaaccgt 317 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 178 bits (90), Expect = 1e-41 Identities = 178/206 (86%), Gaps = 6/206 (2%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 413 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 414 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 471 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 472 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 531 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 532 agaggtccgaaccgactgatgttgaa 557 || |||||||||||| ||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaa 830 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 204 gcgattcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 184 bits (93), Expect = 2e-43 Identities = 324/394 (82%), Gaps = 9/394 (2%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 2137 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 2196 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||| ||||| |||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 2197 taaatattcctgaatgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccc 2256 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 345 | | ||| ||||||||||||| |||||||| | |||| |||||||||||||| | Sbjct: 2257 cgggaggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggacga 2313 Query: 346 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 405 | | ||||||| ||||| ||||||||||||||||||||||| || |||||||| | Sbjct: 2314 cttaacgtctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggc-ag 2372 Query: 406 gttaagg-gaacggaacccaccggagccgtagcgaaagcgagtcttaat-agggcgattg 463 ||||||| | | ||| ||||||||| ||| ||||||||| ||| || || ||| | | Sbjct: 2373 gttaaggcgtaaagaa--taccggagccatagtgaaagcgag-cttgataagagcgttcg 2429 Query: 464 tcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatga 523 |||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | Sbjct: 2430 tcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaa 2489 Query: 524 aactaagcagaggtccgaaccgactgatgttgaa 557 |||||| ||||||||||||||||||||||||| Sbjct: 2490 cactaagtggaggtccgaaccgactgatgttgaa 2523 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1959 agcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 8e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 284 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 285 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 341 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 342 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 395 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 107 bits (54), Expect = 4e-20 Identities = 108/125 (86%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 435 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaacctgggtga 492 ||||||||||||||| ||||||||| | ||||| | ||||||||||||||||||| ||| Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacctggatga 702 Query: 493 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 552 |||| ||||| |||||||||||||||| | | || || ||||||||||||||| |||| Sbjct: 703 tctaaccatggccaggatgaagcttgggtaacaccaattggaggtccgaaccgaccgatg 762 Query: 553 ttgaa 557 ||||| Sbjct: 763 ttgaa 767 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 1 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 45 |||||||||| |||||||||||||| ||||||| |||||||||| Sbjct: 197 agcgattcccaaagtagcggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgt 317 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 424 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 483 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 484 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 543 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 544 cgactgatgttgaa 557 |||| ||||||||| Sbjct: 742 cgaccgatgttgaa 755 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 353 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 204 gcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 286 ccagtgggtagtgaaatagaacgtgaaacc 315 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 103 bits (52), Expect = 6e-19 Identities = 78/86 (90%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 435 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 491 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 492 atctatccatgaccaggatgaagctt 517 |||||| |||||||||| |||||||| Sbjct: 719 atctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 215 gcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 286 ccagtgggtagtgaaatagaacgtgaaacc 315 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 476 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 535 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 547 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 606 Query: 536 gtccgaaccgactgatgttgaa 557 ||||||||| |||||||||||| Sbjct: 607 gtccgaacccactgatgttgaa 628 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 49 gcgattcccggagtagtggcgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgact 389 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 286 ccagtgggtagtgaaatagaacgtgaaacc 315 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 103 bits (52), Expect = 6e-19 Identities = 78/86 (90%), Gaps = 3/86 (3%) Strand = Plus / Plus Query: 435 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 491 ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaacccgggtg 718 Query: 492 atctatccatgaccaggatgaagctt 517 |||||| |||||||||| |||||||| Sbjct: 719 atctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 412 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 215 gcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 344 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 345 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 404 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 405 ggttaa 410 |||||| Sbjct: 731 ggttaa 736 Score = 95.6 bits (48), Expect = 1e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 462 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 521 ||||||| ||||| ||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 786 tgtcacttcttatccacccgaacccgggtgatctaaccatggccaggatgaagcttgggt 845 Query: 522 gaaactaagcagaggtccgaaccgactgatgttgaa 557 |||| ||| ||||||||||||||| ||||||||| Sbjct: 846 aaaaccaagtggaggtccgaaccgaccgatgttgaa 881 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 46 ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 316 gcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 169 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 228 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 229 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 288 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 289 gtgggtagtgaaatagaacgtgaaaccgt 317 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 435 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 494 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 495 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 554 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 555 gaa 557 ||| Sbjct: 382 gaa 384 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 353 tctgaccgcgtgcctgttgaagaatgagccggcga 387 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 286 ccagt-gggtagtgaaatagaacgtgaaaccgt 317 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 131 bits (66), Expect = 3e-27 Identities = 169/203 (83%), Gaps = 4/203 (1%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 414 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 415 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 474 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 475 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 534 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 535 ggtccgaaccgactgatgttgaa 557 |||||||||||| ||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaa 912 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 204 gcgattcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 133 bits (67), Expect = 7e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 547 ctgatgttgaa 557 ||||||||||| Sbjct: 592 ctgatgttgaa 602 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 395 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 133 bits (67), Expect = 7e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 547 ctgatgttgaa 557 ||||||||||| Sbjct: 592 ctgatgttgaa 602 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 395 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 547 ctgatgttgaa 557 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 547 ctgatgttgaa 557 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 133 bits (67), Expect = 7e-28 Identities = 115/131 (87%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 547 ctgatgttgaa 557 ||||||||||| Sbjct: 592 ctgatgttgaa 602 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 395 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 547 ctgatgttgaa 557 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 547 ctgatgttgaa 557 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 225 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 226 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 285 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 286 ccagtgggtagtgaaatagaacgtgaaaccgtg 318 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 141 bits (71), Expect = 3e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 427 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 486 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 487 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 546 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 547 ctgatgttgaa 557 |||| |||||| Sbjct: 605 ctgacgttgaa 615 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 355 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 285 c 285 | Sbjct: 485 c 485 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 402 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 431 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 490 ||||||||||||| ||||| | ||||| ||||| | ||||||||||||||| | || Sbjct: 625 ccgtagcgaaagcaagtctgacaagggcccatgtcatcgtttatggacccgaacccgagt 684 Query: 491 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 550 |||||| ||||| ||||| |||||||| | ||| ||| || |||| ||| |||||| || Sbjct: 685 gatctaaccatggccagggtgaagctttggtgagactgagtggaggcccgtaccgaccga 744 Query: 551 tgttgaa 557 ||||||| Sbjct: 745 tgttgaa 751 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| |||||||||||||||| |||| |||||||||||| Sbjct: 200 gcgattcccccagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 88 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 137 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 165 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 224 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 225 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 284 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 285 c 285 | Sbjct: 498 c 498 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Plus Query: 354 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 395 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 471 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 530 ||||||||||||||| | |||||||| ||||| ||||| |||||||| | ||| ||| || Sbjct: 678 ttatggacccgaacccgagtgatctaaccatggccagggtgaagctttggtgagactgag 737 Query: 531 cagaggtccgaaccgactgatgttgaa 557 |||| ||| |||||| ||||||||| Sbjct: 738 tggaggcccgtaccgaccgatgttgaa 764 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 2 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47 ||||||||| |||||||||||||||| |||| |||||||||||| Sbjct: 213 gcgattcccccagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 88 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 137 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,008,464 Number of Sequences: 3902068 Number of extensions: 3008464 Number of successful extensions: 90713 Number of sequences better than 10.0: 25948 Number of HSP's better than 10.0 without gapping: 25790 Number of HSP's successfully gapped in prelim test: 191 Number of HSP's that attempted gapping in prelim test: 47306 Number of HSP's gapped (non-prelim): 41821 length of query: 557 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 534 effective length of database: 17,143,297,704 effective search space: 9154520973936 effective search space used: 9154520973936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
