ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16h18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119114 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 119055 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119054 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 118995 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118994 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 118935 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118934 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 118875 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118874 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 118815 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118814 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 118755 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118754 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 118695 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118694 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 118635 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 118634 aaaacattggtgagaatccaatgccccgaaaac 118602 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96042 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 96101 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96102 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 96161 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96162 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 96221 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96222 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 96281 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96282 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 96341 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96342 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 96401 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96402 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 96461 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96462 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 96521 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 96522 aaaacattggtgagaatccaatgccccgaaaac 96554
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119114 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 119055 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119054 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 118995 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118994 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 118935 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118934 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 118875 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118874 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 118815 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118814 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 118755 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118754 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 118695 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118694 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 118635 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 118634 aaaacattggtgagaatccaatgccccgaaaac 118602 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96042 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 96101 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96102 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 96161 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96162 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 96221 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96222 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 96281 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96282 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 96341 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96342 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 96401 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96402 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 96461 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96462 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 96521 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 96522 aaaacattggtgagaatccaatgccccgaaaac 96554
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119063 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 119004 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119003 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 118944 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118943 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 118884 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118883 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 118824 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118823 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 118764 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118763 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 118704 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118703 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 118644 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118643 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 118584 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 118583 aaaacattggtgagaatccaatgccccgaaaac 118551 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95987 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 96046 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96047 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 96106 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96107 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 96166 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96167 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 96226 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96227 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 96286 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96287 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 96346 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96347 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 96406 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96407 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 96466 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 96467 aaaacattggtgagaatccaatgccccgaaaac 96499
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508620 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 31508679 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508680 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 31508739 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508740 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 31508799 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508800 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 31508859 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508860 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 31508919 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508920 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 31508979 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508980 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 31509039 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509040 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 31509099 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 31509100 aaaacattggtgagaatccaatgccccgaaaac 31509132 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Minus Query: 180 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 240 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 300 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 360 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 420 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 480 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 11512970 Score = 480 bits (242), Expect = e-132 Identities = 245/246 (99%) Strand = Plus / Minus Query: 282 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 342 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 402 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 462 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 521 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 522 gaaaac 527 |||||| Sbjct: 27320423 gaaaac 27320418 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 196 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 255 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 256 taaaggaggtggggg 270 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 199 gtcgagagggaaacagcccggatcaccagctaaggccc 236 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 98 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 152 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83976 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 83917 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83916 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 83857 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83856 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 83797 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83796 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 83737 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83736 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 83677 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83676 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 83617 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83616 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 83557 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83556 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 83497 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 83496 aaaacattggtgagaatccaatgccccgaaaac 83464
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 119024 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 118964 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 118904 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 118844 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118843 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 118784 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118783 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 118724 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118723 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 118664 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118663 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 118604 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 118603 aaaacattggtgagaatccaatgccccgaaaac 118571 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96035 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 96094 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96095 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 96154 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96155 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 96214 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96215 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 96274 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96275 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 96334 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96335 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 96394 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96395 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 96454 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96455 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 96514 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 96515 aaaacattggtgagaatccaatgccccgaaaac 96547
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123083 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 123142 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123143 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 123202 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123203 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 123262 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123263 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 123322 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123323 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 123382 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123383 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 123442 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123443 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 123502 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123503 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 123562 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 123563 aaaacattggtgagaatccaatgccccgaaaac 123595 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14809 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 14868 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14869 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 14928 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14929 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 14988 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14989 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 15048 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15049 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 15108 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15109 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 15168 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15169 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 15228 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15229 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 15288 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 15289 aaaacattggtgagaatccaatgccccgaaaac 15321
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141617 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 141676 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141677 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 141736 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141737 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 141796 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141797 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 141856 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141857 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 141916 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141917 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 141976 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141977 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 142036 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142037 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 142096 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 142097 aaaacattggtgagaatccaatgccccgaaaac 142129
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268969 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 9269028 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269029 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 9269088 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269089 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 9269148 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269149 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 9269208 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269209 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 9269268 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269269 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 9269328 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269329 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 9269388 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269389 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 9269448 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 9269449 aaaacattggtgagaatccaatgccccgaaaac 9269481 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228469 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 9228528 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228529 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 9228588 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228589 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 9228648 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228649 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 9228708 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228709 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 9228768 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228769 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 9228828 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228829 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 9228888 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228889 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 9228948 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 9228949 aaaacattggtgagaatccaatgccccgaaaac 9228981 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165057 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 9165116 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165117 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 9165176 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165177 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 9165236 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165237 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 9165296 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165297 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 9165356 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165357 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 9165416 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165417 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 9165476 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165477 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 9165536 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 9165537 aaaacattggtgagaatccaatgccccgaaaac 9165569 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056883 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 9056942 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056943 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 9057002 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057003 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 9057062 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057063 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 9057122 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057123 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 9057182 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057183 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 9057242 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057243 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 9057302 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057303 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 9057362 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 9057363 aaaacattggtgagaatccaatgccccgaaaac 9057395
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938954 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 19939013 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939014 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 19939073 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939074 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 19939133 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939134 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 19939193 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939194 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 19939253 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939254 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 19939313 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939314 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 19939373 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939374 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 19939433 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 19939434 aaaacattggtgagaatccaatgccccgaaaac 19939466 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387821 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 10387880 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387881 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 10387940 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387941 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 10388000 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388001 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 10388060 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388061 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 10388120 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388121 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 10388180 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10388181 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagg 10388240 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388241 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 10388300 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 10388301 aaaacattggtgagaatccaatgccccgaaaac 10388333 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276477 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 10276418 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276417 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 10276358 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276357 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 10276298 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276297 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 10276238 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276237 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 10276178 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276177 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 10276118 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276117 aatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 10276058 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276057 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 10275998 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 10275997 aaaacattggtgagaatccaatgccccgaaaac 10275965 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 336 gatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 105 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 164 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 165 tcggccagtgagacgatgggggataagcttcatcgtcgagag 206 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241312 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 9241253 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241252 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 9241193 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241192 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 9241133 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241132 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 9241073 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241072 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 9241013 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241012 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 9240953 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240952 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 9240893 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240892 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 9240833 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 9240832 aaaacattggtgagaatccaatgccccgaaaac 9240800 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 70 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 129 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 130 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 189 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 190 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 235 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 224 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 277 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 278 acagccaggaggtttgcctagaagcagccaccctttaaagag 319 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 385 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 431 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagct 388 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 223 accagctaaggcccctaaatgaccgctcagtgataaagga 262 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599136 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 31599195 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599196 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 31599255 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599256 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 31599315 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599316 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 31599375 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599376 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 31599435 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599436 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 31599495 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599496 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 31599555 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599556 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 31599615 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 31599616 aaaacattggtgagaatccaatgccccgaaaac 31599648 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Minus Query: 180 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 240 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 300 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 360 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 420 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 480 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 11509733 Score = 480 bits (242), Expect = e-132 Identities = 245/246 (99%) Strand = Plus / Minus Query: 282 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 342 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 402 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 462 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 521 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 522 gaaaac 527 |||||| Sbjct: 27411746 gaaaac 27411741 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 196 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 255 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 256 taaaggaggtggggg 270 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 199 gtcgagagggaaacagcccggatcaccagctaaggccc 236 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 98 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 152 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47089 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 47030 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47029 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 46970 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46969 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 46910 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46909 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 46850 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46849 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 46790 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46789 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 46730 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46729 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 46670 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46669 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 46610 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 46609 aaaacattggtgagaatccaatgccccgaaaac 46577
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52525 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 52466 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52465 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 52406 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52405 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 52346 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52345 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 52286 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52285 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 52226 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52225 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 52166 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52165 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 52106 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52105 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 52046 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 52045 aaaacattggtgagaatccaatgccccgaaaac 52013
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 480 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 540 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 600 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 660 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 720 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 780 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 840 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 900 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 901 aaaacattggtgagaatccaatgccccgaaaac 933
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 675 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 735 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 795 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 855 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 915 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 975 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 1035 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 1095 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 1096 aaaacattggtgagaatccaatgccccgaaaac 1128
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 546 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 606 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 666 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 726 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 786 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 846 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 906 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 966 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 967 aaaacattggtgagaatccaatgccccgaaaac 999
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 296 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 356 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 416 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 476 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 536 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 596 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 656 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 716 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 717 aaaacattggtgagaatccaatgccccgaaaac 749
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 675 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 735 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 795 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 855 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 915 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 975 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 1035 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 1095 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 1096 aaaacattggtgagaatccaatgccccgaaaac 1128
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950230 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 19950289 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950290 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 19950349 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950350 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 19950409 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950410 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 19950469 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950470 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 19950529 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950530 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 19950589 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950590 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 19950649 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950650 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 19950709 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 19950710 aaaacattggtgagaatccaatgccccgaaaac 19950742 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393860 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 10393919 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393920 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 10393979 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393980 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 10394039 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394040 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 10394099 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394100 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 10394159 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394160 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 10394219 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10394220 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagg 10394279 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394280 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 10394339 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 10394340 aaaacattggtgagaatccaatgccccgaaaac 10394372 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282516 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 10282457 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282456 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 10282397 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282396 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 10282337 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282336 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 10282277 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282276 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 10282217 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282216 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 10282157 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282156 aatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 10282097 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282096 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 10282037 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 10282036 aaaacattggtgagaatccaatgccccgaaaac 10282004 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 336 gatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 105 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 164 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 165 tcggccagtgagacgatgggggataagcttcatcgtcgagag 206 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119057 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 118998 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118997 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 118938 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118937 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 118878 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118877 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 118818 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118817 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 118758 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118757 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 118698 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118697 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 118638 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118637 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 118578 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 118577 aaaacattggtgagaatccaatgccccgaaaac 118545 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95982 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 96041 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96042 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 96101 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96102 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 96161 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96162 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 96221 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96222 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 96281 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96282 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 96341 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96342 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 96401 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96402 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 96461 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 96462 aaaacattggtgagaatccaatgccccgaaaac 96494
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119249 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 119190 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119189 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 119130 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119129 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 119070 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119069 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 119010 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119009 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 118950 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118949 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 118890 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118889 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 118830 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118829 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 118770 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 118769 aaaacattggtgagaatccaatgccccgaaaac 118737 Score = 1017 bits (513), Expect = 0.0 Identities = 513/513 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95645 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 95704 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 95764 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95765 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 95824 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95825 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 95884 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95885 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 95944 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95945 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 96004 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96005 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 96064 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96065 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 96124 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 96125 aaaacattggtgagaatccaatgccccgaaaac 96157
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1011 bits (510), Expect = 0.0 Identities = 510/510 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526452 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 33526511 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526512 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 33526571 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526572 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 33526631 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526632 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 33526691 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526692 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 33526751 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526752 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 33526811 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526812 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 33526871 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526872 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 33526931 Query: 495 aaaacattggtgagaatccaatgccccgaa 524 |||||||||||||||||||||||||||||| Sbjct: 33526932 aaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 189 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 248 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 249 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 308 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 309 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 369 ctaagcgatctgccgaagctgtgggatgtcaaaat 403 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 93.7 bits (47), Expect = 6e-16 Identities = 103/119 (86%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaac 1076662 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 336 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 377 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 405 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 464 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 465 gcggaagcgagaatgtcggcttgagtaac 493 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 485 ttgagtaacgaaaacattggtgagaatc 512 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1011 bits (510), Expect = 0.0 Identities = 510/510 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71649 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 71708 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71709 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 71768 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71769 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 71828 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71829 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 71888 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71889 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 71948 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71949 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 72008 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72009 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 72068 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72069 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 72128 Query: 495 aaaacattggtgagaatccaatgccccgaa 524 |||||||||||||||||||||||||||||| Sbjct: 72129 aaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 485 ttgagtaacgaaaacattggtgagaatc 512 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118030 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 117971 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117970 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 117911 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117910 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 117851 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117850 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 117791 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117790 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 117731 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117730 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 117671 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117670 aatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 117611 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117610 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 117551 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 117550 aaaacattggtgagaatccaatgccccgaaaac 117518
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94213 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 94272 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94273 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 94332 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94333 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 94392 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94393 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 94452 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94453 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 94512 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94513 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 94572 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 94573 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagg 94632 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94633 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 94692 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 94693 aaaacattggtgagaatccaatgccccgaaaac 94725
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21044 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 21103 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21104 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 21163 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21164 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 21223 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21224 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 21283 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21284 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 21343 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21344 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 21403 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21404 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 21463 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21464 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 21523 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 21524 aaaacattggtgagaatccaatgccccgaaaac 21556 Score = 1001 bits (505), Expect = 0.0 Identities = 511/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44073 ctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 44014 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44013 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 43954 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43953 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 43894 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43893 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 43834 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43833 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 43774 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43773 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 43714 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43713 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 43654 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43653 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 43594 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 43593 aaaacattggtgagaatccaatgccccgaaaac 43561
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57802 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 57743 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57742 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 57683 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57682 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 57623 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57622 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 57563 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57562 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 57503 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57502 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 57443 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57442 aatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 57383 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57382 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 57323 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 57322 aaaacattggtgagaatccaatgccccgaaaac 57290
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 644 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 584 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 524 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 464 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 404 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 344 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 284 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 224 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 223 aaaacattggtgagaatccaatgccccgaaaac 191
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28277 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 28336 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28337 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 28396 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28397 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 28456 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28457 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 28516 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28517 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 28576 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28577 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 28636 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 28637 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagg 28696 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28697 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 28756 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 28757 aaaacattggtgagaatccaatgccccgaaaac 28789
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122913 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 122854 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122853 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 122794 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122793 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 122734 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122733 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 122674 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122673 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 122614 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122613 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 122554 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122553 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 122494 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122493 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 122434 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 122433 aaaacattggtgagaatccaatgccccgaaaac 122401 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99924 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 99983 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99984 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 100043 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100044 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 100103 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100104 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 100163 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100164 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 100223 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100224 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 100283 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100284 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 100343 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100344 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 100403 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 100404 aaaacattggtgagaatccaatgccccgaaaac 100436
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 674 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 734 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 794 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 854 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 atagaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 914 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 974 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 1034 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1035 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 1094 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 1095 aaaacattggtgagaatccaatgccccgaaaac 1127
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 298 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 358 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 418 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 478 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 538 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 598 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 658 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 659 gaagcaaccgcgaaagcgggggttgacgaagcggaagcgagaatgtcggcttgagtaacg 718 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 719 aaaacattggtgagaatccaatgccccgaaaac 751
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123630 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 123571 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123570 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 123511 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123510 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 123451 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123450 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 123391 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123390 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 123331 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123330 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 123271 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123270 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 123211 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123210 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 123151 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 123150 aaaacattggtgagaatccaatgccccgaaaac 123118 Score = 1009 bits (509), Expect = 0.0 Identities = 512/513 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100601 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 100660 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100661 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 100720 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100721 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 100780 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100781 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 100840 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100841 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 100900 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100901 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 100960 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100961 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 101020 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101021 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 101080 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 101081 aaaacattggtgagaatccaatgccccgaaaac 101113
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 975 bits (492), Expect = 0.0 Identities = 492/492 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 677 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 737 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 797 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 857 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 917 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 977 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 1037 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 1097 Query: 495 aaaacattggtg 506 |||||||||||| Sbjct: 1098 aaaacattggtg 1109
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 946 bits (477), Expect = 0.0 Identities = 506/513 (98%), Gaps = 2/513 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122853 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 122794 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122793 agcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 122735 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122734 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 122675 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122674 catcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtg 122615 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122614 ataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttta 122555 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 122554 aagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagc 122496 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122495 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 122436 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122435 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 122376 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 122375 aaaacattggtgagaatccaatgccccgaaaac 122343 Score = 946 bits (477), Expect = 0.0 Identities = 506/513 (98%), Gaps = 2/513 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99884 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 99943 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99944 agcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 100002 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100003 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 100062 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100063 catcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtg 100122 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100123 ataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttta 100182 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 100183 aagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagc 100241 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100242 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 100301 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100302 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 100361 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 100362 aaaacattggtgagaatccaatgccccgaaaac 100394
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 946 bits (477), Expect = 0.0 Identities = 506/513 (98%), Gaps = 2/513 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6237 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 6296 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6297 agcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 6355 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6356 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 6415 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 6416 catcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtg 6475 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6476 ataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttta 6535 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 6536 aagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagc 6594 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6595 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 6654 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6655 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 6714 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 6715 aaaacattggtgagaatccaatgccccgaaaac 6747
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 946 bits (477), Expect = 0.0 Identities = 506/513 (98%), Gaps = 2/513 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 825 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 884 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 885 agcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 943 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 1003 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1004 catcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtg 1063 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1064 ataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagccacccttta 1123 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1124 aagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagc 1182 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1183 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 1242 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1243 gaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 1302 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||| Sbjct: 1303 aaaacattggtgagaatccaatgccccgaaaac 1335
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 882 bits (445), Expect = 0.0 Identities = 496/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 871 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 872 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 931 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 932 gatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagctt 991 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1051 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 1052 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 1111 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1112 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1171 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1172 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggg 1231 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1232 gaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacg 1291 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 1292 caaacattggtgagaatccaatgccccgaaaac 1324
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 882 bits (445), Expect = 0.0 Identities = 496/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132185 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 132126 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 132125 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 132066 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 132065 gatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagctt 132006 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132005 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 131946 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 131945 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 131886 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131885 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 131826 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131825 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggg 131766 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 131765 gaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacg 131706 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 131705 caaacattggtgagaatccaatgccccgaaaac 131673 Score = 882 bits (445), Expect = 0.0 Identities = 496/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104579 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 104638 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104639 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 104698 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 104699 gatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagctt 104758 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104759 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 104818 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 104819 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 104878 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104879 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 104938 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104939 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggg 104998 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 104999 gaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacg 105058 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 105059 caaacattggtgagaatccaatgccccgaaaac 105091
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 882 bits (445), Expect = 0.0 Identities = 496/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133146 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 133087 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 133086 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 133027 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 133026 gatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagctt 132967 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132966 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 132907 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 132906 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 132847 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 132846 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 132787 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132786 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggg 132727 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 132726 gaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacg 132667 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 132666 caaacattggtgagaatccaatgccccgaaaac 132634 Score = 882 bits (445), Expect = 0.0 Identities = 496/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105503 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 105562 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 105563 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 105622 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 105623 gatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagctt 105682 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105683 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 105742 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 105743 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 105802 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105803 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 105862 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105863 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggg 105922 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 105923 gaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacg 105982 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 105983 caaacattggtgagaatccaatgccccgaaaac 106015
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 874 bits (441), Expect = 0.0 Identities = 495/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138691 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 138632 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 138631 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 138572 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 138571 gatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagctt 138512 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138511 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 138452 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 138451 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 138392 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138391 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 138332 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 138331 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagggg 138272 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 138271 gaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggcttgagtaacg 138212 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 138211 caaacattggtgagaatccaatgccccgaaaac 138179 Score = 874 bits (441), Expect = 0.0 Identities = 495/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110406 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 110465 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 110466 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 110525 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110526 gatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagctt 110585 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110586 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 110645 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 110646 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 110705 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110706 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 110765 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 110766 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagggg 110825 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 110826 gaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggcttgagtaacg 110885 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 110886 caaacattggtgagaatccaatgccccgaaaac 110918
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 874 bits (441), Expect = 0.0 Identities = 495/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141294 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 141235 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 141234 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 141175 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141174 gatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagctt 141115 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141114 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 141055 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 141054 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 140995 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 140994 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 140935 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 140934 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagt 140875 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 140874 gaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 140815 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 140814 caaacattggtgagaatccaatgccccgaaaac 140782 Score = 874 bits (441), Expect = 0.0 Identities = 495/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112363 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 112422 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 112423 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 112482 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112483 gatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagctt 112542 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112543 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 112602 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 112603 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 112662 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 112663 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 112722 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112723 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagt 112782 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 112783 gaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 112842 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 112843 caaacattggtgagaatccaatgccccgaaaac 112875
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 874 bits (441), Expect = 0.0 Identities = 495/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138896 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 138837 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 138836 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 138777 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138776 gatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagctt 138717 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138716 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 138657 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 138656 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 138597 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138596 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 138537 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 138536 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagg 138477 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138476 gaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggcttgagtaacg 138417 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 138416 caaacattggtgagaatccaatgccccgaaaac 138384 Score = 874 bits (441), Expect = 0.0 Identities = 495/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110403 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 110462 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 110463 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 110522 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110523 gatatgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagctt 110582 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110583 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 110642 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 110643 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 110702 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110703 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 110762 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 110763 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagg 110822 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| |||||| ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110823 gaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggcttgagtaacg 110882 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 110883 caaacattggtgagaatccaatgccccgaaaac 110915
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 872 bits (440), Expect = 0.0 Identities = 495/513 (96%), Gaps = 4/513 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127050 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 126991 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 126990 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 126931 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 126930 gatatgaccccaaa----caggggtcaaggtcggccagtgagacgatgggggataagctt 126875 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126874 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 126815 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 126814 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 126755 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 126754 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 126695 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126694 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 126635 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| |||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 126634 gaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 126575 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 126574 caaacattggtgagaatccaatgccccgaaaac 126542 Score = 872 bits (440), Expect = 0.0 Identities = 495/513 (96%), Gaps = 4/513 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107872 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 107931 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107932 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107991 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107992 gatatgaccccaaa----caggggtcaaggtcggccagtgagacgatgggggataagctt 108047 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108048 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 108107 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 108108 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 108167 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 108168 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 108227 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108228 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 108287 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| |||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 108288 gaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 108347 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 108348 caaacattggtgagaatccaatgccccgaaaac 108380
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 866 bits (437), Expect = 0.0 Identities = 494/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130854 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 130795 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 130794 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 130735 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130734 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 130675 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130674 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 130615 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 130614 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 130555 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 130554 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 130495 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 130494 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagt 130435 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 130434 gaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 130375 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 130374 caaacattggtgagaatccaatgccccgaaaac 130342 Score = 866 bits (437), Expect = 0.0 Identities = 494/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103781 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 103840 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 103841 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 103900 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103901 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 103960 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103961 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 104020 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 104021 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 104080 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104081 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 104140 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 104141 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagt 104200 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 104201 gaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 104260 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 104261 caaacattggtgagaatccaatgccccgaaaac 104293
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131962 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 131903 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 131902 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 131843 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131842 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 131783 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131782 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 131723 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 131722 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 131663 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131662 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 131603 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 131602 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagt 131543 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 131542 gaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 131483 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 131482 caaacattggtgagaatccaatgccccgaaaac 131450 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104916 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 104975 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104976 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 105035 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105036 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 105095 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105096 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 105155 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 105156 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 105215 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105216 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 105275 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 105276 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagt 105335 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 105336 gaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 105395 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 105396 caaacattggtgagaatccaatgccccgaaaac 105428
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135088 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 135029 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 135028 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 134969 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134968 gatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 134909 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134908 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 134849 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134848 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134789 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134788 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134729 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134728 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagg 134669 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| | ||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 134668 gaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacg 134609 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134608 caaacattggtgagaatccaatgccccgaaaac 134576 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106818 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106877 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106878 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106937 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106938 gatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 106997 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106998 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 107057 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 107058 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 107117 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107118 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107177 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107178 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagg 107237 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| | ||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 107238 gaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacg 107297 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107298 caaacattggtgagaatccaatgccccgaaaac 107330
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135779 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 135720 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 135719 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 135660 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 135659 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 135600 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135599 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 135540 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 135539 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 135480 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135479 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 135420 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 135419 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagg 135360 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||| | ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 135359 gaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 135300 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 135299 caaacattggtgagaatccaatgccccgaaaac 135267 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106646 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106705 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106706 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106765 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106766 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 106825 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106826 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106885 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106886 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106945 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106946 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107005 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 107006 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagg 107065 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||| | ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 107066 gaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 107125 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107126 caaacattggtgagaatccaatgccccgaaaac 107158
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135367 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 135308 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 135307 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 135248 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135247 gatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 135188 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135187 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 135128 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 135127 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 135068 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135067 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 135008 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135007 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagg 134948 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| | ||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 134947 gaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacg 134888 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134887 caaacattggtgagaatccaatgccccgaaaac 134855 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107040 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 107099 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107100 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107159 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107160 gatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 107219 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107220 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 107279 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 107280 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 107339 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107340 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107399 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107400 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagg 107459 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| | ||| ||| | || |||||||||||||||||||||||||||||||||||| Sbjct: 107460 gaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacg 107519 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107520 caaacattggtgagaatccaatgccccgaaaac 107552
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 858 bits (433), Expect = 0.0 Identities = 494/513 (96%), Gaps = 1/513 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133409 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaa 133350 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 133349 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 133290 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133289 gatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatgggggataagctt 133231 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133230 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 133171 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| | Sbjct: 133170 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgccacccttga 133111 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 133110 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 133051 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 133050 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagaga 132991 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| |||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 132990 gaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 132931 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 132930 caaacattggtgagaatccaatgccccgaaaac 132898 Score = 858 bits (433), Expect = 0.0 Identities = 494/513 (96%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104562 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaa 104621 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104622 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 104681 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104682 gatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatgggggataagctt 104740 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104741 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 104800 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| | Sbjct: 104801 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgccacccttga 104860 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104861 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 104920 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104921 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagaga 104980 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| |||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 104981 gaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 105040 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 105041 caaacattggtgagaatccaatgccccgaaaac 105073
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131955 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 131896 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 131895 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 131836 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131835 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 131776 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131775 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 131716 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 131715 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 131656 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131655 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 131596 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 131595 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagt 131536 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 131535 gaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 131476 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 131475 caaacattggtgagaatccaatgccccgaaaac 131443 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104914 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 104973 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104974 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 105033 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105034 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 105093 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105094 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 105153 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 105154 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 105213 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105214 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 105273 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 105274 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagagt 105333 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 105334 gaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacg 105393 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 105394 caaacattggtgagaatccaatgccccgaaaac 105426
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 858 bits (433), Expect = 0.0 Identities = 493/513 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 873 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 874 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 933 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 993 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 994 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1053 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 1054 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 1113 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1114 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1173 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| || Sbjct: 1174 gatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgccttagggg 1233 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| | ||| ||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1234 gaagcacctgcgcgagcagcggtagacgaagcggaagcgagaatgtcggcttgagtaacg 1293 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 1294 caaacattggtgagaatccaatgccccgaaaac 1326
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 852 bits (430), Expect = 0.0 Identities = 496/518 (95%), Gaps = 5/518 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138772 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 138713 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 138712 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 138653 Query: 135 gatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggata 189 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138652 gatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggata 138593 Query: 190 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138592 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 138533 Query: 250 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 309 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138532 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 138473 Query: 310 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 369 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 138472 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggc 138413 Query: 370 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138412 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcctt 138353 Query: 430 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 489 |||| |||||| ||||| ||| || || ||||||||||||||||||||||||||||||| Sbjct: 138352 agagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgag 138293 Query: 490 taacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||| |||||||||||||||||||||||||||||||| Sbjct: 138292 taacgcaaacattggtgagaatccaatgccccgaaaac 138255 Score = 852 bits (430), Expect = 0.0 Identities = 496/518 (95%), Gaps = 5/518 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111173 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 111232 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 111233 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 111292 Query: 135 gatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggata 189 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111293 gatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggata 111352 Query: 190 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111353 agcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgct 111412 Query: 250 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 309 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111413 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 111472 Query: 310 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 369 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 111473 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggc 111532 Query: 370 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111533 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcctt 111592 Query: 430 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 489 |||| |||||| ||||| ||| || || ||||||||||||||||||||||||||||||| Sbjct: 111593 agagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgag 111652 Query: 490 taacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||| |||||||||||||||||||||||||||||||| Sbjct: 111653 taacgcaaacattggtgagaatccaatgccccgaaaac 111690
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135487 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 135428 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 135427 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 135368 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 135367 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 135308 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135307 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 135248 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 135247 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 135188 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135187 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 135128 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 135127 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 135068 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135067 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 135008 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 135007 caaacattggtgagaatccaatgccccgaaaac 134975 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107143 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 107202 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107203 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107262 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107263 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 107322 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107323 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 107382 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 107383 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 107442 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107443 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107502 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107503 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 107562 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107563 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 107622 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107623 caaacattggtgagaatccaatgccccgaaaac 107655
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136125 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 136066 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 136065 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 136006 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 136005 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 135946 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135945 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 135886 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 135885 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 135826 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135825 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 135766 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 135765 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttataga 135706 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135705 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 135646 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 135645 caaacattggtgagaatccaatgccccgaaaac 135613 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107432 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 107491 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107492 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107551 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107552 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 107611 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107612 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 107671 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 107672 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 107731 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107732 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107791 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 107792 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttataga 107851 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107852 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 107911 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107912 caaacattggtgagaatccaatgccccgaaaac 107944
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2337 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 2396 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 2397 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 2456 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2457 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 2516 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2517 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 2576 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 2577 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 2636 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2637 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 2696 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 2697 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 2756 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 2757 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 2816 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 2817 caaacattggtgagaatccaatgccccgaaaac 2849
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134733 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 134674 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 134673 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 134614 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134613 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 134554 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134553 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 134494 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134493 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134434 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134433 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134374 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134373 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 134314 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134313 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 134254 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134253 caaacattggtgagaatccaatgccccgaaaac 134221 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106303 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106362 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106363 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106422 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106423 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 106482 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106483 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106542 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106543 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106602 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106603 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 106662 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106663 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 106722 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106723 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 106782 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 106783 caaacattggtgagaatccaatgccccgaaaac 106815
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134868 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 134809 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 134808 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 134749 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134748 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 134689 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134688 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 134629 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134628 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134569 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134568 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134509 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134508 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 134449 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134448 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 134389 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134388 caaacattggtgagaatccaatgccccgaaaac 134356 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106475 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106534 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106535 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106594 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106595 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 106654 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106655 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106714 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106715 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106774 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106775 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 106834 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106835 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 106894 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106895 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 106954 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 106955 caaacattggtgagaatccaatgccccgaaaac 106987
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134866 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 134807 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 134806 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 134747 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134746 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 134687 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134686 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 134627 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134626 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134567 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134566 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134507 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134506 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 134447 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134446 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 134387 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134386 caaacattggtgagaatccaatgccccgaaaac 134354 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106472 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106531 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106532 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106591 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106592 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 106651 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106652 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106711 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106712 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106771 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106772 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 106831 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106832 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 106891 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106892 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 106951 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 106952 caaacattggtgagaatccaatgccccgaaaac 106984
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134778 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 134719 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 134718 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 134659 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134658 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 134599 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134598 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 134539 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134538 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134479 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134478 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134419 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134418 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 134359 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134358 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 134299 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134298 caaacattggtgagaatccaatgccccgaaaac 134266 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106350 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106409 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106410 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106469 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106470 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 106529 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106530 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106589 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106590 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106649 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106650 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 106709 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106710 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 106769 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106770 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 106829 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 106830 caaacattggtgagaatccaatgccccgaaaac 106862
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135485 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 135426 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 135425 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 135366 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 135365 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 135306 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135305 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 135246 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 135245 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 135186 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135185 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 135126 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 135125 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 135066 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 135065 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 135006 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 135005 caaacattggtgagaatccaatgccccgaaaac 134973 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107141 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 107200 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107201 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107260 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107261 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 107320 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107321 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 107380 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 107381 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 107440 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107441 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107500 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107501 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 107560 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107561 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 107620 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107621 caaacattggtgagaatccaatgccccgaaaac 107653
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135216 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 135157 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 135156 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 135097 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 135096 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 135037 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135036 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 134977 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134976 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134917 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134916 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134857 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134856 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 134797 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134796 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 134737 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134736 caaacattggtgagaatccaatgccccgaaaac 134704 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106922 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106981 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106982 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 107041 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107042 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 107101 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107102 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 107161 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 107162 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 107221 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107222 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 107281 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 107282 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 107341 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 107342 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 107401 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 107402 caaacattggtgagaatccaatgccccgaaaac 107434
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 850 bits (429), Expect = 0.0 Identities = 492/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 969 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 970 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 1029 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1030 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 1089 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1090 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 1149 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 1150 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 1209 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1210 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1269 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1270 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 1329 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1330 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 1389 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 1390 caaacattggtgagaatccaatgccccgaaaac 1422
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 842 bits (425), Expect = 0.0 Identities = 491/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142066 ctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 142007 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 142006 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 141947 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141946 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 141887 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141886 gatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 141827 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141826 ataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttga 141767 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 141766 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 141707 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 141706 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 141647 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 141646 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 141587 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 141586 caaacattggtgagaatccaatgccccgaaaac 141554 Score = 842 bits (425), Expect = 0.0 Identities = 491/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111262 ctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 111321 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 111322 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 111381 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111382 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 111441 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111442 gatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtg 111501 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111502 ataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttga 111561 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 111562 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 111621 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 111622 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 111681 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 111682 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 111741 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 111742 caaacattggtgagaatccaatgccccgaaaac 111774
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 842 bits (425), Expect = 0.0 Identities = 491/513 (95%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134745 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 134686 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || Sbjct: 134685 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataata 134626 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 134625 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 134566 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134565 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 134506 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 134505 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 134446 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134445 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 134386 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 134385 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 134326 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 134325 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 134266 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 134265 caaacattggtgagaatccaatgccccgaaaac 134233 Score = 842 bits (425), Expect = 0.0 Identities = 491/513 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106376 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| || Sbjct: 106377 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataata 106436 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 106437 gatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagctt 106496 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106497 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106556 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106557 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106616 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106617 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 106676 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 | ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 106677 ggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 106736 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 106737 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 106796 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 106797 caaacattggtgagaatccaatgccccgaaaac 106829
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 841 bits (424), Expect = 0.0 Identities = 490/512 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 869 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 870 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 929 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 930 gatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagctt 989 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1049 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1050 ataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagccacccttga 1109 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1110 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1169 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 1170 gatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccgccttaaagg 1229 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||||||||| ||| |||| |||||||||||||||| |||||| |||||||||||| Sbjct: 1230 gaagcaaccgcgccagcaagggtggacgaagcggaagcgaaaatgtccgcttgagtaacg 1289 Query: 495 aaaacattggtgagaatccaatgccccgaaaa 526 ||||||||||||||||| |||||||| |||| Sbjct: 1290 caaacattggtgagaatctaatgcccccaaaa 1321
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 496 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 556 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 616 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 676 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 736 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 796 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 856 Query: 435 gaa 437 ||| Sbjct: 857 gaa 859
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 835 bits (421), Expect = 0.0 Identities = 491/513 (95%), Gaps = 1/513 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2583 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 2642 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 2643 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 2702 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2703 gatatgactcaaaa-taacaggggtcaaggtcggctagtgagacgatgggggataagctt 2761 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2762 catcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagtg 2821 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 2822 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 2881 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2882 aagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagatgaacggggctaagc 2941 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 2942 gatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgccttagaga 3001 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 3002 gaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 3061 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 3062 caaacattggtgagaatccaatgccccgaaaac 3094
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 827 bits (417), Expect = 0.0 Identities = 420/421 (99%) Strand = Plus / Minus Query: 107 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 167 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 227 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 287 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 347 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 407 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 466 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 467 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 100 Query: 527 c 527 | Sbjct: 99 c 99
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 811 bits (409), Expect = 0.0 Identities = 487/513 (94%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131054 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaa 130995 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 130994 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 130935 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 130934 gatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagctt 130875 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130874 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 130815 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| | Sbjct: 130814 ataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagccacccttga 130755 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 130754 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 130695 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 130694 gatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgccttagagg 130635 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||| | ||||| ||| | | | |||||||||||||||||||||||||||||||||||| Sbjct: 130634 gaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggcttgagtaacg 130575 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||| ||||||||||||||||||| ||||||| Sbjct: 130574 caaacgttggtgagaatccaatgcctcgaaaac 130542 Score = 811 bits (409), Expect = 0.0 Identities = 487/513 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104340 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaa 104399 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104400 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 104459 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104460 gatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagctt 104519 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104520 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 104579 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| | Sbjct: 104580 ataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagccacccttga 104639 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104640 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 104699 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 104700 gatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgccttagagg 104759 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||| | ||||| ||| | | | |||||||||||||||||||||||||||||||||||| Sbjct: 104760 gaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggcttgagtaacg 104819 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||| ||||||||||||||||||| ||||||| Sbjct: 104820 caaacgttggtgagaatccaatgcctcgaaaac 104852
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 811 bits (409), Expect = 0.0 Identities = 487/513 (94%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 129717 ctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaa 129658 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 129657 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 129598 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 129597 gatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagctt 129538 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 129537 catcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 129478 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 129477 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 129418 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 129417 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 129358 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 129357 gatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgccttagagg 129298 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||| | ||||| ||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 129297 gaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 129238 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||| ||||||||||||||||||| ||||||| Sbjct: 129237 caaacgttggtgagaatccaatgcctcgaaaac 129205 Score = 811 bits (409), Expect = 0.0 Identities = 487/513 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 102739 ctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaa 102798 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 102799 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 102858 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 102859 gatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagctt 102918 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102919 catcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 102978 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 102979 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 103038 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 103039 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 103098 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 103099 gatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgccttagagg 103158 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||| | ||||| ||| | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 103159 gaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggcttgagtaacg 103218 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||| ||||||||||||||||||| ||||||| Sbjct: 103219 caaacgttggtgagaatccaatgcctcgaaaac 103251
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 807 bits (407), Expect = 0.0 Identities = 487/513 (94%), Gaps = 8/513 (1%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134171 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 134112 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 134111 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 134052 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||| || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 134051 gatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagctt 133999 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133998 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 133939 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 133938 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 133879 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 133878 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 133819 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 133818 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-cttagagg 133760 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 133759 gaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 133700 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 133699 caaacattggtgagaatccaatgccccgaaaac 133667 Score = 807 bits (407), Expect = 0.0 Identities = 487/513 (94%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106111 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 106170 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 106171 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 106230 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||| || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106231 gatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagctt 106283 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106284 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 106343 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 106344 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 106403 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106404 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 106463 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 106464 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-cttagagg 106522 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||||| ||||| ||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 106523 gaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacg 106582 Query: 495 aaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 106583 caaacattggtgagaatccaatgccccgaaaac 106615
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 799 bits (403), Expect = 0.0 Identities = 403/403 (100%) Strand = Plus / Plus Query: 125 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 185 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 245 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 305 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 365 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 425 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 485 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 403
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 789 bits (398), Expect = 0.0 Identities = 486/514 (94%), Gaps = 1/514 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1308 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 1367 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1368 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 1427 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg-ataagct 193 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1428 gatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggggataagct 1487 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1488 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 1547 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1548 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1607 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1608 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1667 Query: 374 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 433 |||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| | Sbjct: 1668 cgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgtgttaggg 1727 Query: 434 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaac 493 ||||||| | ||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct: 1728 ggaagcatcggcgcgagccatgccagacgaagcggaagcgagaatgtcggcttgagtaac 1787 Query: 494 gaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||||||||||||||||||||||||||| Sbjct: 1788 gcaaacattggtgagaatccaatgccccgaaaac 1821
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 773 bits (390), Expect = 0.0 Identities = 485/514 (94%), Gaps = 2/514 (0%) Strand = Plus / Plus Query: 15 ctagctggttctcccc-gaaatgcgttgaggcgcagcagttgactggacatctaggggta 73 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 ctagctggttctcccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 888 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 889 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 948 Query: 134 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 949 agatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatgggggataagct 1008 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 |||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||| Sbjct: 1009 tcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatgatcgctcagt 1068 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 |||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||| Sbjct: 1069 gataaaggaggtaggggtgcagagacagccaggaggtttg-ctataagcagccacccttg 1127 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1128 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 1187 Query: 374 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 433 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||| | Sbjct: 1188 tgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgtcttaggg 1247 Query: 434 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaac 493 ||||||| | ||| ||| | ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1248 ggaagcacctgcgcgagcagtggtagacgaagcggaagcgagaatgtcggcttgagtaac 1307 Query: 494 gaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||||||||||||||||||||||||||| Sbjct: 1308 gcaaacattggtgagaatccaatgccccgaaaac 1341
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 767 bits (387), Expect = 0.0 Identities = 489/518 (94%), Gaps = 5/518 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 892 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 893 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 952 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 953 gatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagctt 1012 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1072 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 1073 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 1132 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1133 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1192 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | Sbjct: 1193 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttaaaag 1252 Query: 435 gaagcaac--cgcgaaagcgggggtcgacgaagcgg-aagcgagaatgtcggcttgagta 491 ||| || | |||||| |||| | |||||| ||| || | |||||||||||||||||| Sbjct: 1253 gaaacacccgcgcgaacaaggggttggacgaaacggaaaccaagaatgtcggcttgagta 1312 Query: 492 acg-aaaaca-ttggtgagaatccaatgccccgaaaac 527 ||| |||||| |||||||||||| |||||||||||||| Sbjct: 1313 acgcaaaacatttggtgagaatctaatgccccgaaaac 1350
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 767 bits (387), Expect = 0.0 Identities = 485/515 (94%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 874 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 875 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 934 Query: 134 agatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataagc 192 |||||||| || |||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 935 agatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggggataagc 994 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 ttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcag 1054 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 1114 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct: 1115 gaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaa 1174 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1175 gcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttaga 1234 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 |||||||| | ||| ||| || || |||||||||||||||||||||||||||||||||| Sbjct: 1235 gggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaa 1294 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1295 cgcaaacattggtgagaatccaatgccccgaaaac 1329
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 751 bits (379), Expect = 0.0 Identities = 486/522 (93%), Gaps = 16/522 (3%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 139547 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaa 139488 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 139487 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 139428 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139427 gatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagctt 139375 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139374 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 139315 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 139314 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 139255 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 139254 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 139195 Query: 375 gatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcgttccgcc 427 ||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 139194 gatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgcc 139135 Query: 428 ttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaatgtcggct 485 ||||||||||||| ||||| ||| | | || ||||||||||||||||||||||||||| Sbjct: 139134 ttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaatgtcggct 139075 Query: 486 tgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139074 tgagtaacgcaaacattggtgagaatccaatgccccgaaaac 139033 Score = 751 bits (379), Expect = 0.0 Identities = 486/522 (93%), Gaps = 16/522 (3%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 110513 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaa 110572 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 110573 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 110632 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110633 gatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagctt 110685 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110686 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 110745 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 110746 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 110805 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110806 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 110865 Query: 375 gatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcgttccgcc 427 ||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 110866 gatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgcc 110925 Query: 428 ttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaatgtcggct 485 ||||||||||||| ||||| ||| | | || ||||||||||||||||||||||||||| Sbjct: 110926 ttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaatgtcggct 110985 Query: 486 tgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110986 tgagtaacgcaaacattggtgagaatccaatgccccgaaaac 111027
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 743 bits (375), Expect = 0.0 Identities = 482/515 (93%), Gaps = 2/515 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 117334 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 117275 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 117274 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 117215 Query: 134 agatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggggataagc 192 |||||||| || |||||| ||||| || |||| ||||||||||| |||||||||||| Sbjct: 117214 agatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataagc 117155 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 117154 ttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaag 117095 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117094 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 117035 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct: 117034 gaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaa 116975 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 116974 gcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttaga 116915 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 |||||||| | ||| ||| || || |||||||||||||||||||||||||||||||||| Sbjct: 116914 gggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaa 116855 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 116854 cgcaaacattggtgagaatccaatgccccgaaaac 116820 Score = 743 bits (375), Expect = 0.0 Identities = 482/515 (93%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 90768 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 90827 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 90828 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 90887 Query: 134 agatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatgggggataagc 192 |||||||| || |||||| ||||| || |||| ||||||||||| |||||||||||| Sbjct: 90888 agatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataagc 90947 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 90948 ttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctaag 91007 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91008 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 91067 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct: 91068 gaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaa 91127 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 91128 gcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttaga 91187 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 |||||||| | ||| ||| || || |||||||||||||||||||||||||||||||||| Sbjct: 91188 gggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaa 91247 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 91248 cgcaaacattggtgagaatccaatgccccgaaaac 91282
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 728 bits (367), Expect = 0.0 Identities = 480/515 (93%), Gaps = 2/515 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51873 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 51814 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||| |||||||| | | ||||||||||||||||| ||||||||||||||||| Sbjct: 51813 agcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatacta 51754 Query: 135 ga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 || ||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 51753 gaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagct 51694 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 51693 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcagt 51634 Query: 254 gataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 51633 gataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 51574 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||| Sbjct: 51573 gaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaa 51514 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 51513 gcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgccttaga 51454 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || ||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 51453 gggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggcttgagtaa 51394 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 51393 cgcaaacattggtgagaatccaatgccccgaaaac 51359 Score = 728 bits (367), Expect = 0.0 Identities = 480/515 (93%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37955 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 38014 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||| |||||||| | | ||||||||||||||||| ||||||||||||||||| Sbjct: 38015 agcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatacta 38074 Query: 135 ga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 || ||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 38075 gaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagct 38134 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 38135 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcagt 38194 Query: 254 gataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 38195 gataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 38254 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||| Sbjct: 38255 gaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaa 38314 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 38315 gcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgccttaga 38374 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || ||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 38375 gggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggcttgagtaa 38434 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 38435 cgcaaacattggtgagaatccaatgccccgaaaac 38469
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 728 bits (367), Expect = 0.0 Identities = 480/515 (93%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 874 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 875 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 934 Query: 134 agatatgacccaaaaataacaggggtcaagg-tcggccagtgagacgatgggggataagc 192 |||||||| | |||||| |||| |||| || ||||||||||| |||||||||||| Sbjct: 935 agatatgatctccgaataacgggggataagggtcaaccagtgagacggtgggggataagc 994 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 ttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcag 1054 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 || |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctt 1114 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| |||| Sbjct: 1115 gaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaa 1174 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1175 gcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgccttagg 1234 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 |||||||| | ||| ||| || || |||||||||||||||||||||||||||||||||| Sbjct: 1235 gggaagcaccagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaa 1294 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1295 cgcaaacattggtgagaatccaatgccccgaaaac 1329
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 728 bits (367), Expect = 0.0 Identities = 480/515 (93%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4883 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 4942 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||| |||||||| | | ||||||||||||||||| ||||||||||||||||| Sbjct: 4943 agcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatacta 5002 Query: 135 ga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 || ||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 5003 gaatatgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagct 5062 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 5063 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatcgctcagt 5122 Query: 254 gataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5123 gataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 5182 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||| Sbjct: 5183 gaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaa 5242 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 5243 gcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccgccttaga 5302 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || ||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 5303 gggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggcttgagtaa 5362 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 5363 cgcaaacattggtgagaatccaatgccccgaaaac 5397
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 716 bits (361), Expect = 0.0 Identities = 481/520 (92%), Gaps = 7/520 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 871 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||| |||||||| | | ||||||||||||||||| ||||||||||||||||| Sbjct: 872 agcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatacta 931 Query: 135 ga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 932 gaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggggataagct 991 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 |||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| Sbjct: 992 tcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgatcgctcagt 1051 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1052 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 1111 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 ||| |||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||| Sbjct: 1112 aaatagtgcgtaatagcttactgatcgagcgctcttgcgccgaagattaacggggctaag 1171 Query: 374 cgatctgccgaagctgtgggatg------tcaaaatgcatcggtaggggagcgttccgcc 427 ||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 1172 cgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtaggggagcgttccgcc 1231 Query: 428 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 487 |||||||||||| | || ||| | ||| |||||| |||||||||||||||||||||| Sbjct: 1232 ttagagggaagcctctgcacgagcagcggtggacgaaacggaagcgagaatgtcggcttg 1291 Query: 488 agtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1292 agtaacgcaaacattggtgagaatccaatgccccgaaaac 1331
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 706 bits (356), Expect = 0.0 Identities = 477/514 (92%), Gaps = 5/514 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 87078 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggta 87137 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 87138 aagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 87197 Query: 134 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 |||| || ||| ||||| |||||| | |||| ||||||||||||||||||||||||| Sbjct: 87198 agat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatgggggataagct 87253 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 87254 tcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 87313 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 ||| ||||| || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 87314 gatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttg 87373 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| Sbjct: 87374 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaag 87433 Query: 374 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 433 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 87434 cgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcctcagag 87493 Query: 434 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaac 493 |||||| | ||| ||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 87494 agaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaac 87553 Query: 494 gaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||||||||||||||||||||||||||| Sbjct: 87554 gcaaacattggtgagaatccaatgccccgaaaac 87587
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 704 bits (355), Expect = 0.0 Identities = 397/411 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130978 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 130919 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 130918 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 130859 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130858 gatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 130799 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130798 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 130739 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 130738 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 130679 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 130678 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 130619 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 425 | ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 130618 ggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 704 bits (355), Expect = 0.0 Identities = 397/411 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102467 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 102526 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 102527 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 102586 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102587 gatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 102646 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102647 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 102706 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 102707 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 102766 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 102767 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 102826 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 425 | ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 102827 ggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 102877 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 130474 cccgaaaac 130466 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 102971 cccgaaaac 102979
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 696 bits (351), Expect = 0.0 Identities = 405/423 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 880 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 881 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 940 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 941 gatatgacctcaaaataacaggggttaaggtcggccagtgagacaatgggggataagctt 1000 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1001 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcaatg 1060 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| | Sbjct: 1061 ataaaggaggtaggggtgcacagacagccacgaggtttgcctataagcagccacccttga 1120 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| | Sbjct: 1121 aagagtgcgtaatagctcactgatcgagcgctcttgcgcccaagatgaacggggctaaac 1180 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1181 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttcccccttagagg 1240 Query: 435 gaa 437 ||| Sbjct: 1241 gaa 1243 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 483 gcttgagtaacgaaaacattggtgagaatccaatgcccc 521 |||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccc 1326
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 696 bits (351), Expect = 0.0 Identities = 468/507 (92%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 891 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 892 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 951 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 952 gatatgacctcaaaataacaggggttaaggtcggccagtgagaccatgggggataagctt 1011 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 catcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1071 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| | Sbjct: 1072 ataaaggaggtaggggtgcagagacagccaagaggtttgcctagaagcagccacccttga 1131 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||| Sbjct: 1132 aagagtgcgtaatagctcactgatccagcgctcttgcgcccaaaatgaacggggctaagc 1191 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||| Sbjct: 1192 gatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcccccttaaagg 1251 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 ||| || || | | | |||| ||| || ||||| | |||||||| || | ||||||| Sbjct: 1252 gaaacaccccccccaacatgggtggaccaaacggaaaccagaatgtccgccttagtaacg 1311 Query: 495 aaaacattggtgagaatccaatgcccc 521 ||||||||||||||||| |||||||| Sbjct: 1312 caaacattggtgagaatctaatgcccc 1338
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 694 bits (350), Expect = 0.0 Identities = 407/426 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 819 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 878 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 879 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 938 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 939 gatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 998 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 catcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1058 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| | Sbjct: 1059 ataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaagcagccacccttga 1118 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct: 1119 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaaac 1178 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||| || Sbjct: 1179 gatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgtgttagggg 1238 Query: 435 gaagca 440 |||||| Sbjct: 1239 gaagca 1244
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 690 bits (348), Expect = 0.0 Identities = 348/348 (100%) Strand = Plus / Minus Query: 180 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 240 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 300 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 360 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 420 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 480 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 63542
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 690 bits (348), Expect = 0.0 Identities = 442/470 (94%), Gaps = 5/470 (1%) Strand = Plus / Plus Query: 58 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 117 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 118 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 177 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 178 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 238 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 297 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 298 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 357 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 358 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 417 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 418 gcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaa 477 |||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||| Sbjct: 676 gcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaa 735 Query: 478 tgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| | ||||| | |||||||||||||||||||||||||||||||| Sbjct: 736 tgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaac 781 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgtt 40 |||||||||||||||||||||||||| Sbjct: 273 ctagctggttctccccgaaatgcgtt 298
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 688 bits (347), Expect = 0.0 Identities = 480/520 (92%), Gaps = 7/520 (1%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 145744 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 145685 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145684 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 145625 Query: 134 agatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacgatggggga 187 || ||||| | |||| || |||||| ||| |||||| |||||||||||| ||||||| Sbjct: 145624 aggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggga 145565 Query: 188 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 247 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 145564 taagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccg 145505 Query: 248 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 307 ||||||| | |||||||| || ||||| |||||||||||| ||||||||||||||||||| Sbjct: 145504 ctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaagcagcca 145445 Query: 308 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 367 ||||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||| Sbjct: 145444 cccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacggg 145385 Query: 368 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 427 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 145384 actaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgcc 145325 Query: 428 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 487 ||||||||||||| | ||| ||| || || ||| ||||||||||||||||||||||||| Sbjct: 145324 ttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgtcggcttg 145265 Query: 488 agtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||| |||||||||||||||||||||||||||||||| Sbjct: 145264 agtaacgcaaacattggtgagaatccaatgccccgaaaac 145225 Score = 688 bits (347), Expect = 0.0 Identities = 480/520 (92%), Gaps = 7/520 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112718 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 112777 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112778 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 112837 Query: 134 agatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacgatggggga 187 || ||||| | |||| || |||||| ||| |||||| |||||||||||| ||||||| Sbjct: 112838 aggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggga 112897 Query: 188 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 247 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 112898 taagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccg 112957 Query: 248 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 307 ||||||| | |||||||| || ||||| |||||||||||| ||||||||||||||||||| Sbjct: 112958 ctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaagcagcca 113017 Query: 308 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 367 ||||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||| Sbjct: 113018 cccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacggg 113077 Query: 368 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 427 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 113078 actaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgcc 113137 Query: 428 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 487 ||||||||||||| | ||| ||| || || ||| ||||||||||||||||||||||||| Sbjct: 113138 ttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgtcggcttg 113197 Query: 488 agtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||| |||||||||||||||||||||||||||||||| Sbjct: 113198 agtaacgcaaacattggtgagaatccaatgccccgaaaac 113237
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 688 bits (347), Expect = 0.0 Identities = 410/431 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 833 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaa 892 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 893 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 952 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 953 aatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagctt 1012 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 catcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1072 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| | Sbjct: 1073 ataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaagcagccacccttga 1132 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1133 aagagtgcgtaataactcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1192 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||| Sbjct: 1193 gatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttcccccttatagg 1252 Query: 435 gaagcaaccgc 445 |||||| |||| Sbjct: 1253 gaagcacccgc 1263
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 682 bits (344), Expect = 0.0 Identities = 411/432 (95%), Gaps = 1/432 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 853 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 854 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 913 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 gatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 973 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 974 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgcccagtg 1033 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 1034 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 1093 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1094 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1153 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggta-ggggagcgttccgccttagag 433 ||||||||||||||||||||||| |||| |||| ||| ||| ||||||||| |||| | Sbjct: 1154 gatctgccgaagctgtgggatgtaaaaaaacatccgtatgggaagcgttccgtgttaggg 1213 Query: 434 ggaagcaaccgc 445 ||||||| |||| Sbjct: 1214 ggaagcatccgc 1225
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 680 bits (343), Expect = 0.0 Identities = 343/343 (100%) Strand = Plus / Plus Query: 185 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 245 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 305 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 365 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 425 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 485 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 343
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 672 bits (339), Expect = 0.0 Identities = 473/514 (92%), Gaps = 4/514 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 89164 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggta 89223 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||| Sbjct: 89224 aagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctgaatact 89283 Query: 134 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 |||| |||| || | || ||||| | |||| ||||||||||||||||||||||||| Sbjct: 89284 agatt--accccaataaaag-ggggtaagggtcaaccagtgagacgatgggggataagct 89340 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 89341 tcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagt 89400 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 ||| ||||| || | |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 89401 gatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttg 89460 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||| Sbjct: 89461 aaagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagatgaacgggactaag 89520 Query: 374 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 433 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| Sbjct: 89521 cgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcctcagag 89580 Query: 434 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaac 493 ||||||| | ||| ||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 89581 ggaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaac 89640 Query: 494 gaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||||||||||||||||||||||||||| Sbjct: 89641 gcaaacattggtgagaatccaatgccccgaaaac 89674
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 658 bits (332), Expect = 0.0 Identities = 332/332 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 677 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 737 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 797 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 857 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 917 Query: 315 aagagtgcgtaatagctcactgatcgagcgcc 346 |||||||||||||||||||||||||||||||| Sbjct: 918 aagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 654 bits (330), Expect = 0.0 Identities = 354/362 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122393 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 122334 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122333 agcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatacta 122274 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 122273 gatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagctt 122214 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 122213 catcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatg 122154 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122153 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 122094 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122093 aagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagc 122034 Query: 375 ga 376 || Sbjct: 122033 ga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 654 bits (330), Expect = 0.0 Identities = 354/362 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824934 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 12824875 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 12824874 agcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatacta 12824815 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 12824814 gatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagctt 12824755 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 12824754 catcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatg 12824695 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824694 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 12824635 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12824634 aagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagc 12824575 Query: 375 ga 376 || Sbjct: 12824574 ga 12824573
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 648 bits (327), Expect = 0.0 Identities = 470/515 (91%), Gaps = 2/515 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 819 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggggta 878 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 879 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 938 Query: 134 agatatgacccaaaaataacaggg-gtcaaggtcggccagtgagacgatgggggataagc 192 |||| ||| | ||||| || | || | |||| |||||||||| |||||||||||| Sbjct: 939 ggataggactccctaataatagagagtaagggtcaaccagtgagacagtgggggataagc 998 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||| || Sbjct: 999 ttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgaccgctaag 1058 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 || |||||||||| || |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1059 tggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccatcctt 1118 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 |||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| |||| Sbjct: 1119 gaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaa 1178 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1179 gcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgccttagg 1238 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 | |||||| | ||| ||| || || |||||||||||||||||||||||||||||||||| Sbjct: 1239 gagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaa 1298 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1299 cgcaaacattggtgagaatccaatgccccgaaaac 1333
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 646 bits (326), Expect = 0.0 Identities = 403/429 (93%), Gaps = 6/429 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 892 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| Sbjct: 893 agcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaatacta 952 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| | |||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 953 gatatgacc------tcacaggggttaaggtcggccaatgagacgatgggggataagctt 1006 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 catcttccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 1066 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 1067 ataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaagcagccacccttga 1126 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||| | Sbjct: 1127 aagagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaac 1186 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 1187 gatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccctaaagg 1246 Query: 435 gaagcaacc 443 ||| ||||| Sbjct: 1247 gaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 496 aaacattggtgagaatccaatgccccgaaaa 526 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 642 bits (324), Expect = 0.0 Identities = 375/392 (95%) Strand = Plus / Minus Query: 136 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 195 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 196 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 255 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 256 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 315 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 316 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 376 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 436 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 495 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 496 aaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaac 249
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 640 bits (323), Expect = e-180 Identities = 385/403 (95%), Gaps = 2/403 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177656 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 177715 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 177716 agcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 177775 Query: 135 gatatgacccaaaaataacaggggt-caaggtcggccagtgagacgatgggggataagct 193 ||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||| Sbjct: 177776 gatatgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggggataagct 177835 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177836 tcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgaccgctcagt 177895 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177896 gataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 177955 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 177956 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 178015 Query: 374 cgat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 415 |||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178016 cgatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 277 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 277 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 231 aggcccctaaatgaccgctcag 252 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gtcgagagggaaacagcccggatc 222 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gtcgagagggaaacagcccggatc 222 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 611 bits (308), Expect = e-171 Identities = 363/382 (95%), Gaps = 7/382 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 298 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaa 357 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 358 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 417 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 418 gatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagctt 470 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 530 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 531 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 590 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 591 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 650 Query: 375 gatctgccgaagctgtgggatg 396 |||||||||||||||||||||| Sbjct: 651 gatctgccgaagctgtgggatg 672
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 607 bits (306), Expect = e-170 Identities = 463/514 (90%), Gaps = 1/514 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 127626 ctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggta 127567 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 127566 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 127507 Query: 134 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 || |||||||| || ||| ||| | |||| ||||||||||||||||||||||||| Sbjct: 127506 aggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagct 127447 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 |||| |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 127446 tcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcagt 127387 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 | |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127386 ggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctta 127327 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| Sbjct: 127326 aaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaag 127267 Query: 374 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 433 | ||||||||||||||| ||||||||| ||||||||||||||||||||| | ||| Sbjct: 127266 tggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgtatcagaa 127207 Query: 434 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaac 493 |||||| ||| ||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 127206 agaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaac 127147 Query: 494 gaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||||||||||||||||||||||||||| Sbjct: 127146 gcaaacattggtgagaatccaatgccccgaaaac 127113 Score = 607 bits (306), Expect = e-170 Identities = 463/514 (90%), Gaps = 1/514 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 95821 ctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggta 95880 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95881 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 95940 Query: 134 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 193 || |||||||| || ||| ||| | |||| ||||||||||||||||||||||||| Sbjct: 95941 aggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagct 96000 Query: 194 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 253 |||| |||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 96001 tcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactgctcagt 96060 Query: 254 gataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 313 | |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96061 ggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagccaccctta 96120 Query: 314 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 373 |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| Sbjct: 96121 aaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaag 96180 Query: 374 cgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagag 433 | ||||||||||||||| ||||||||| ||||||||||||||||||||| | ||| Sbjct: 96181 tggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgtatcagaa 96240 Query: 434 ggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaac 493 |||||| ||| ||| || || ||||||||||||||||||||||||||||||||||| Sbjct: 96241 agaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaac 96300 Query: 494 gaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||||||||||||||||||||||||||| Sbjct: 96301 gcaaacattggtgagaatccaatgccccgaaaac 96334
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 583 bits (294), Expect = e-163 Identities = 349/368 (94%), Gaps = 7/368 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 314 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaa 373 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 374 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 433 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||| || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 434 gatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagctt 486 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 546 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 547 ataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 606 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 607 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 666 Query: 375 gatctgcc 382 |||||||| Sbjct: 667 gatctgcc 674
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 571 bits (288), Expect = e-160 Identities = 456/512 (89%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||| |||| Sbjct: 3008 ctagctggttctccctgaaatgcattgaagcgcagcagttgactggacatctaggagtaa 2949 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| | |||| ||||||||| ||||||||||||||||| || Sbjct: 2948 agcactgtttcggtgcgggcaatgagagcagtaccaaattgaggcaaactctgaatatta 2889 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||| || | ||||| ||| |||||||||||||| |||||||||| | ||||||||||| Sbjct: 2888 gatacgatctcaaaatcacaagggtcaaggtcggcgagtgagacgacgagggataagctt 2829 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 ||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||| Sbjct: 2828 catcgtcgagagggaaacaacctggatcaccagctaaggcccctaaatgactgctcagtg 2769 Query: 255 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 314 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 2768 ataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcaaccacccttga 2709 Query: 315 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 374 || |||||||||||||||||| ||||||||| ||||| | |||||||| ||||||||| Sbjct: 2708 aaaagtgcgtaatagctcactaatcgagcgcacttgcaccaaagatgaattgggctaagc 2649 Query: 375 gatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagg 434 |||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2648 gatctgttgaagctatgggatgtcaaaatgcatcgataggggagcgttccgccttagagg 2589 Query: 435 gaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacg 494 |||||| | || || | ||| || || ||||||||| |||||||||||| ||| | Sbjct: 2588 gaagcacctgcacgagtagtggtggaagaggcggaagcgggaatgtcggcttttttaagg 2529 Query: 495 aaaacattggtgagaatccaatgccccgaaaa 526 ||||||||||||||||||||||||| ||||| Sbjct: 2528 caaacattggtgagaatccaatgccctgaaaa 2497
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 565 bits (285), Expect = e-158 Identities = 352/373 (94%), Gaps = 1/373 (0%) Strand = Plus / Plus Query: 156 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 214 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 215 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 274 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 275 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 334 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 335 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 394 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 395 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 454 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 455 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 514 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 515 atgccccgaaaac 527 ||||||||||||| Sbjct: 5805 atgccccgaaaac 5817 Score = 234 bits (118), Expect = 2e-58 Identities = 127/130 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5311 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 5370 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 5371 agcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 5430 Query: 135 gatatgaccc 144 |||||||||| Sbjct: 5431 gatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 565 bits (285), Expect = e-158 Identities = 352/373 (94%), Gaps = 1/373 (0%) Strand = Plus / Plus Query: 156 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 214 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 215 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 274 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 275 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 334 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 335 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 394 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 395 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 454 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 455 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 514 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 515 atgccccgaaaac 527 ||||||||||||| Sbjct: 5805 atgccccgaaaac 5817 Score = 234 bits (118), Expect = 2e-58 Identities = 127/130 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5311 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 5370 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 5371 agcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 5430 Query: 135 gatatgaccc 144 |||||||||| Sbjct: 5431 gatatgaccc 5440
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 555 bits (280), Expect = e-155 Identities = 343/364 (94%) Strand = Plus / Plus Query: 164 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 224 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 283 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 284 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 343 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 344 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 403 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 404 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 463 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 464 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 523 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 524 aaac 527 |||| Sbjct: 5542 aaac 5545 Score = 224 bits (113), Expect = 2e-55 Identities = 122/125 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5043 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 5102 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 5103 agcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 5162 Query: 135 gatat 139 ||||| Sbjct: 5163 gatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 555 bits (280), Expect = e-155 Identities = 343/364 (94%) Strand = Plus / Minus Query: 164 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 224 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 283 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 284 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 343 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 344 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 403 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 404 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 463 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 464 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 523 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 524 aaac 527 |||| Sbjct: 22383 aaac 22380 Score = 224 bits (113), Expect = 2e-55 Identities = 122/125 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22882 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 22823 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 22822 agcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 22763 Query: 135 gatat 139 ||||| Sbjct: 22762 gatat 22758
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 539 bits (272), Expect = e-150 Identities = 272/272 (100%) Strand = Plus / Plus Query: 256 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 316 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 376 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 436 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 496 aaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaac 272
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 523 aaaac 527 ||||| Sbjct: 5218 aaaac 5222 Score = 220 bits (111), Expect = 4e-54 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4704 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 4763 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4764 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 4823 Query: 134 agatatg 140 || |||| Sbjct: 4824 aggtatg 4830
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 525 bits (265), Expect = e-146 Identities = 460/521 (88%), Gaps = 8/521 (1%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||| ||||||| | | | || | |||| Sbjct: 138453 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggta 138394 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 138393 aagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatact 138334 Query: 134 agatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataag 191 | |||| ||| | | | ||| | ||| ||||||||||||||||||| ||||||||||| Sbjct: 138333 gggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataag 138274 Query: 192 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 251 ||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 138273 cttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctca 138214 Query: 252 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 311 ||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 138213 gtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccaccct 138154 Query: 312 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 371 | |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| ||| Sbjct: 138153 tgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggacta 138094 Query: 372 agcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct- 428 |||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 138093 agcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcctc 138034 Query: 429 --tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 486 |||||||||| | ||| ||| || | |||||||||||||||||| ||||||||| Sbjct: 138033 ggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggctt 137974 Query: 487 gagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||| |||||||||||||||||||||||||||||||| Sbjct: 137973 gagtaacgcaaacattggtgagaatccaatgccccgaaaac 137933 Score = 525 bits (265), Expect = e-146 Identities = 460/521 (88%), Gaps = 8/521 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||| ||||||| | | | || | |||| Sbjct: 83424 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggta 83483 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 83484 aagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatact 83543 Query: 134 agatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataag 191 | |||| ||| | | | ||| | ||| ||||||||||||||||||| ||||||||||| Sbjct: 83544 gggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataag 83603 Query: 192 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 251 ||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 83604 cttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctca 83663 Query: 252 gtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccct 311 ||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 83664 gtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccaccct 83723 Query: 312 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 371 | |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| ||| Sbjct: 83724 tgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggacta 83783 Query: 372 agcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct- 428 |||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 83784 agcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcctc 83843 Query: 429 --tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 486 |||||||||| | ||| ||| || | |||||||||||||||||| ||||||||| Sbjct: 83844 ggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggctt 83903 Query: 487 gagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||| |||||||||||||||||||||||||||||||| Sbjct: 83904 gagtaacgcaaacattggtgagaatccaatgccccgaaaac 83944
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 523 aaaac 527 ||||| Sbjct: 1328 aaaac 1332 Score = 220 bits (111), Expect = 4e-54 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 814 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 873 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 874 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 933 Query: 134 agatatg 140 || |||| Sbjct: 934 aggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Minus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 523 aaaac 527 ||||| Sbjct: 149917 aaaac 149913 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 523 aaaac 527 ||||| Sbjct: 118749 aaaac 118753 Score = 220 bits (111), Expect = 4e-54 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 150431 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 150372 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 150371 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 150312 Query: 134 agatatg 140 || |||| Sbjct: 150311 aggtatg 150305 Score = 220 bits (111), Expect = 4e-54 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 118235 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 118294 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 118295 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 118354 Query: 134 agatatg 140 || |||| Sbjct: 118355 aggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 525 bits (265), Expect = e-146 Identities = 340/365 (93%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 523 aaaac 527 ||||| Sbjct: 1328 aaaac 1332 Score = 220 bits (111), Expect = 4e-54 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 814 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 873 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 874 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 933 Query: 134 agatatg 140 || |||| Sbjct: 934 aggtatg 940
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 509 bits (257), Expect = e-141 Identities = 321/341 (94%), Gaps = 1/341 (0%) Strand = Plus / Plus Query: 187 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 247 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 306 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 307 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 366 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 367 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 426 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 427 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 486 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 487 gagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||| |||| ||||||||||||||||||| ||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaac 596
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 502 bits (253), Expect = e-139 Identities = 256/257 (99%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 787 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 847 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 907 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 908 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 967 Query: 255 ataaaggaggtgggggt 271 ||||||||||| ||||| Sbjct: 968 ataaaggaggtaggggt 984
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 498 bits (251), Expect = e-137 Identities = 332/359 (92%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 145257 Score = 498 bits (251), Expect = e-137 Identities = 332/359 (92%) Strand = Plus / Minus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 87594 Score = 198 bits (100), Expect = 1e-47 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 144737 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggta 144796 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 144797 aagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 144856 Query: 134 agat 137 |||| Sbjct: 144857 agat 144860 Score = 198 bits (100), Expect = 1e-47 Identities = 119/124 (95%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 88114 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggta 88055 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 88054 aagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 87995 Query: 134 agat 137 |||| Sbjct: 87994 agat 87991
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 498 bits (251), Expect = e-137 Identities = 332/359 (92%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1313 Score = 200 bits (101), Expect = 3e-48 Identities = 120/125 (96%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 801 ctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggggta 860 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 861 aagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatact 920 Query: 134 agata 138 |||| Sbjct: 921 ggata 925
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 494 bits (249), Expect = e-136 Identities = 337/365 (92%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 523 aaaac 527 ||||| Sbjct: 114887 aaaac 114883 Score = 494 bits (249), Expect = e-136 Identities = 337/365 (92%), Gaps = 1/365 (0%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 523 aaaac 527 ||||| Sbjct: 87233 aaaac 87237 Score = 218 bits (110), Expect = 1e-53 Identities = 120/122 (98%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 115396 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 115337 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 115336 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 115277 Query: 134 ag 135 || Sbjct: 115276 ag 115275 Score = 218 bits (110), Expect = 1e-53 Identities = 120/122 (98%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 86724 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggta 86783 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86784 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 86843 Query: 134 ag 135 || Sbjct: 86844 ag 86845
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 480 bits (242), Expect = e-132 Identities = 245/246 (99%) Strand = Plus / Minus Query: 282 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 342 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 402 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 462 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 521 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 522 gaaaac 527 |||||| Sbjct: 20630 gaaaac 20625
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 468 bits (236), Expect = e-129 Identities = 236/236 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 672 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 732 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 792 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 460 bits (232), Expect = e-126 Identities = 373/418 (89%), Gaps = 9/418 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||| ||||||||||||||||||||| |||||||| |||| || ||||||||||||||| Sbjct: 818 ctagttggttctccccgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaa 876 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||| |||| ||| |||| ||||||||| |||||||||| ||||||||| Sbjct: 877 agcactgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactatgaatacta 936 Query: 135 gatatgacc--caaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 ||||||||| |||||||||||||| | ||||| | |||||||||| ||||||||||||| Sbjct: 937 gatatgacctccaaaaataacagggataaaggtggaccagtgagaccatgggggataagc 996 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || Sbjct: 997 ttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctaag 1056 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 1057 ttataaaggaggtaggggtgcatagacaaccaggaggtttgcctagaagaagccaccctt 1116 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| ||||||||||||| ||||||| ||| ||||| ||| ||| Sbjct: 1117 taaagagtgcgtaatagctaactgatcgagcgctcttgcgccgaatatgaatgggaataa 1176 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctta 430 |||| | |||||||||||||||||| | |||||||||||||||||| |||||| Sbjct: 1177 gcgacccgccgaagctgtgggatgtaa------atcggtaggggagcgttctgcctta 1228 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 462 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 521 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 522 gaaaac 527 |||||| Sbjct: 1330 gaaaac 1335
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 454 bits (229), Expect = e-124 Identities = 331/365 (90%) Strand = Plus / Minus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 402 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 403 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 462 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 523 aaaac 527 ||||| Sbjct: 5242 aaaac 5238 Score = 149 bits (75), Expect = 1e-32 Identities = 115/127 (90%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggta 73 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 5733 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggta 5674 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||| ||| | | |||||||| | ||||||||||||| |||||||| Sbjct: 5673 aagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatgaatact 5614 Query: 134 agatatg 140 ||||||| Sbjct: 5613 agatatg 5607
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 450 bits (227), Expect = e-123 Identities = 329/362 (90%), Gaps = 2/362 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 405 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 406 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 465 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 526 ac 527 || Sbjct: 1313 ac 1314 Score = 163 bits (82), Expect = 7e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 73 |||||||||||||||||||||||||||||||||||| ||| | ||| | | |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggta 874 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 875 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 934 Query: 134 ag 135 || Sbjct: 935 ag 936
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 446 bits (225), Expect = e-122 Identities = 328/362 (90%), Gaps = 4/362 (1%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 405 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 406 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 465 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 526 ac 527 || Sbjct: 1272 ac 1273 Score = 172 bits (87), Expect = 7e-40 Identities = 118/127 (92%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggta 73 |||||||||||||||||||||||||||||||||||| |||| ||||| || ||||||| Sbjct: 770 ctagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttaggggta 829 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 830 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 889 Query: 134 agatatg 140 || |||| Sbjct: 890 aggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 444 bits (224), Expect = e-121 Identities = 332/367 (90%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 400 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 401 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 460 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 461 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 520 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 521 cgaaaac 527 ||||||| Sbjct: 1306 cgaaaac 1312 Score = 186 bits (94), Expect = 5e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 73 |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 814 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 873 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 933 Query: 134 ag 135 || Sbjct: 934 ag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 444 bits (224), Expect = e-121 Identities = 332/367 (90%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 400 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 401 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 460 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 461 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 520 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 521 cgaaaac 527 ||||||| Sbjct: 1319 cgaaaac 1325 Score = 186 bits (94), Expect = 5e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 73 |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 827 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 886 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 887 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 946 Query: 134 ag 135 || Sbjct: 947 ag 948
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 440 bits (222), Expect = e-120 Identities = 266/278 (95%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 250 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 309 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 310 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 369 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 370 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-ctt 178 Query: 430 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 489 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 490 taacgaaaacattggtgagaatccaatgccccgaaaac 527 ||||| |||||||||||||||||||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaac 276
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 440 bits (222), Expect = e-120 Identities = 222/222 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 880 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 940 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 1000 Query: 195 catcgtcgagagggaaacagcccggatcaccagctaaggccc 236 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 catcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 436 bits (220), Expect = e-119 Identities = 331/367 (90%), Gaps = 2/367 (0%) Strand = Plus / Plus Query: 163 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 222 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 223 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 282 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 283 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 342 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 343 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 400 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 401 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 460 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 461 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 520 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 521 cgaaaac 527 ||||||| Sbjct: 1423 cgaaaac 1429 Score = 186 bits (94), Expect = 5e-44 Identities = 116/122 (95%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 73 |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct: 931 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 990 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 991 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1050 Query: 134 ag 135 || Sbjct: 1051 ag 1052
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 793 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 851 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 852 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 911 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 912 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 971 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 972 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1031 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1032 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1091 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1092 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1151 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1152 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1206 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1207 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1266 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1267 cgcaaacattggtgagaatccaatgccccgaaaac 1301
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 793 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 851 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 852 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 911 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 912 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 971 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 972 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1031 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1032 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1091 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1092 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1151 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1152 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1206 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1207 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1266 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1267 cgcaaacattggtgagaatccaatgccccgaaaac 1301
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 436 bits (220), Expect = e-119 Identities = 443/515 (86%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaaggagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 434 bits (219), Expect = e-118 Identities = 327/362 (90%), Gaps = 2/362 (0%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 405 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 406 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 465 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 526 ac 527 || Sbjct: 123952 ac 123951 Score = 434 bits (219), Expect = e-118 Identities = 327/362 (90%), Gaps = 2/362 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 405 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 406 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 465 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 526 ac 527 || Sbjct: 95914 ac 95915 Score = 155 bits (78), Expect = 2e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 73 |||||||||||||||||||||||||||||||||||| ||| | ||| | | |||||||| Sbjct: 124450 ctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggta 124391 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 124390 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatact 124331 Query: 134 ag 135 || Sbjct: 124330 ag 124329 Score = 155 bits (78), Expect = 2e-34 Identities = 112/122 (91%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggta 73 |||||||||||||||||||||||||||||||||||| ||| | ||| | | |||||||| Sbjct: 95416 ctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggta 95475 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 95476 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatact 95535 Query: 134 ag 135 || Sbjct: 95536 ag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 430 bits (217), Expect = e-117 Identities = 325/361 (90%), Gaps = 5/361 (1%) Strand = Plus / Plus Query: 167 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 226 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 227 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 286 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 287 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 346 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 347 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 406 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 407 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 466 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 467 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 526 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 527 c 527 | Sbjct: 1355 c 1355 Score = 167 bits (84), Expect = 5e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||| Sbjct: 831 ctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatctaggggtaa 889 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 ||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||| Sbjct: 890 agcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatgaatacta 949 Query: 135 gatatgac 142 |||||||| Sbjct: 950 gatatgac 957
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 428 bits (216), Expect = e-117 Identities = 442/515 (85%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| |||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaggccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 428 bits (216), Expect = e-117 Identities = 442/515 (85%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| | ||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagcttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 428 bits (216), Expect = e-117 Identities = 443/515 (86%), Gaps = 9/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagc-gtt-accagacctctaggggtaa 851 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 852 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 911 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 912 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 971 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 972 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1031 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1032 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1091 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1092 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1151 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1152 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1206 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1207 aggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1266 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1267 cgcaaacattggtgagaatccaatgccccgaaaac 1301
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 428 bits (216), Expect = e-117 Identities = 216/216 (100%) Strand = Plus / Plus Query: 312 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 372 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 432 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 492 acgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaac 216
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 420 bits (212), Expect = e-114 Identities = 441/515 (85%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| || ||| || ||| ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagtcgtt-accagacctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| ||| Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataa 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| || | |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcacgagaagtggtggatgaagcagaggtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 414 bits (209), Expect = e-112 Identities = 320/357 (89%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 5361 Score = 159 bits (80), Expect = 1e-35 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 ||||||||||||||||||||||||||||||||||||| || |||| || ||| ||||||| Sbjct: 4864 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggta 4923 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 4924 aagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 414 bits (209), Expect = e-112 Identities = 320/357 (89%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1328 Score = 159 bits (80), Expect = 1e-35 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 ||||||||||||||||||||||||||||||||||||| || |||| || ||| ||||||| Sbjct: 831 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggta 890 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 891 aagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 440/515 (85%), Gaps = 8/515 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||| ||||| ||| || | | || ||||||||||| Sbjct: 794 ctagctggttctccccgaaatgcgtttaggcggagccgtatccag-acctctaggggtaa 852 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||| ||||||||| || ||| |||||||||||||| |||||||||| |||||| || Sbjct: 853 agcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatgaatatta 912 Query: 135 gatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||| ||||||||||||||| | ||||| | |||| ||||| ||||||||||||| Sbjct: 913 gatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggggataagc 972 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 |||||||||||||||| |||| ||| |||||| ||||||||||||||||||||| || || Sbjct: 973 ttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgaccactaag 1032 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 | ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||||||| || Sbjct: 1033 ttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagccaccttt 1092 Query: 313 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 372 ||||||||||||||||||| |||||||||| || |||| || ||| ||||||||| || Sbjct: 1093 taaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacgggaatag 1152 Query: 373 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttaga 432 || ||| ||||||| ||||||||| | |||||| |||||||||||| |||||| | Sbjct: 1153 gcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctgccttata 1207 Query: 433 gggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaa 492 ||||||| | || || | ||| || ||||| |||| |||||||||||||||||||| Sbjct: 1208 aggaagcacctgcccgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaa 1267 Query: 493 cgaaaacattggtgagaatccaatgccccgaaaac 527 || |||||||||||||||||||||||||||||||| Sbjct: 1268 cgcaaacattggtgagaatccaatgccccgaaaac 1302
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 410 bits (207), Expect = e-111 Identities = 207/207 (100%) Strand = Plus / Plus Query: 321 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 381 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 441 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 501 ttggtgagaatccaatgccccgaaaac 527 ||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaac 207
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaac 1323 Score = 176 bits (89), Expect = 5e-41 Identities = 117/125 (93%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| Sbjct: 826 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggta 885 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 886 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatact 945 Query: 134 agata 138 |||| Sbjct: 946 ggata 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1328 Score = 159 bits (80), Expect = 1e-35 Identities = 111/120 (92%), Gaps = 1/120 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 ||||||||||||||||||||||||||||||||||||| || |||| || ||| ||||||| Sbjct: 831 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggta 890 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 891 aagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 398 bits (201), Expect = e-108 Identities = 323/363 (88%), Gaps = 3/363 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 404 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 405 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 464 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 465 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 524 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 525 aac 527 ||| Sbjct: 1275 aac 1277 Score = 159 bits (80), Expect = 1e-35 Identities = 117/128 (91%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 777 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggta 836 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||| | | ||||||||||| || |||||||||||||||| Sbjct: 837 aagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatact 896 Query: 134 agatatga 141 | |||||| Sbjct: 897 aaatatga 904
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 361 bits (182), Expect = 2e-96 Identities = 318/363 (87%), Gaps = 4/363 (1%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 404 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 405 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 464 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 465 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 524 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 525 aac 527 ||| Sbjct: 1312 aac 1314 Score = 161 bits (81), Expect = 3e-36 Identities = 114/124 (91%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggt 72 |||||||||||||||||||||||||||||||||||| |||| | || ||||||||| Sbjct: 813 ctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggt 872 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 873 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatac 932 Query: 133 taga 136 |||| Sbjct: 933 taga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 361 bits (182), Expect = 2e-96 Identities = 318/363 (87%), Gaps = 4/363 (1%) Strand = Plus / Minus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 404 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 405 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 464 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 465 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 524 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 525 aac 527 ||| Sbjct: 114350 aac 114348 Score = 361 bits (182), Expect = 2e-96 Identities = 318/363 (87%), Gaps = 4/363 (1%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 404 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 405 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 464 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 465 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 524 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 525 aac 527 ||| Sbjct: 87638 aac 87640 Score = 161 bits (81), Expect = 3e-36 Identities = 114/124 (91%), Gaps = 2/124 (1%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggt 72 |||||||||||||||||||||||||||||||||||| |||| | || ||||||||| Sbjct: 114849 ctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggt 114790 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 114789 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatac 114730 Query: 133 taga 136 |||| Sbjct: 114729 taga 114726 Score = 161 bits (81), Expect = 3e-36 Identities = 114/124 (91%), Gaps = 2/124 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggt 72 |||||||||||||||||||||||||||||||||||| |||| | || ||||||||| Sbjct: 87139 ctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggt 87198 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 87199 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatac 87258 Query: 133 taga 136 |||| Sbjct: 87259 taga 87262
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 133 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 313 taaagagtgcgtaatagctca 333 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 133 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 192 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 193 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 252 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 253 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 312 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 313 taaagagtgcgtaatagctca 333 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 189 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 248 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 249 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 308 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 309 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 369 ctaagcgatctgccgaagctgtgggatgtcaaaat 403 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 189 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 248 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 249 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 308 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 309 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 369 ctaagcgatctgccgaagctgtgggatgtcaaaat 403 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 349 bits (176), Expect = 6e-93 Identities = 314/360 (87%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 407 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Score = 165 bits (83), Expect = 2e-37 Identities = 117/127 (92%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||| ||| | ||| | || |||||||| Sbjct: 3849 ctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggta 3908 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 3909 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 3968 Query: 134 agatatg 140 | ||||| Sbjct: 3969 aaatatg 3975
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 345 bits (174), Expect = 9e-92 Identities = 198/206 (96%) Strand = Plus / Plus Query: 322 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 381 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 382 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 441 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 442 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 501 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 502 tggtgagaatccaatgccccgaaaac 527 |||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaac 960
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 343 bits (173), Expect = 4e-91 Identities = 188/193 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364996 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 365055 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 365056 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 365115 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 365116 gatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtgggggataagctt 365175 Query: 195 catcgtcgagagg 207 ||||||||||||| Sbjct: 365176 catcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 202 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 261 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 262 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 320 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 321 gcgtaatagctcactg 336 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 277 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 gtcgagagggaaacagcccggatc 222 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 341 bits (172), Expect = 1e-90 Identities = 314/360 (87%), Gaps = 1/360 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 407 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Score = 165 bits (83), Expect = 2e-37 Identities = 117/127 (92%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||| ||| | ||| | || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggta 874 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 875 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 934 Query: 134 agatatg 140 | ||||| Sbjct: 935 aaatatg 941
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 339 bits (171), Expect = 6e-90 Identities = 312/359 (86%), Gaps = 5/359 (1%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 2858 Score = 133 bits (67), Expect = 6e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||| ||| | | | | ||||||| Sbjct: 2372 ctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttgggggtaa 2431 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2432 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 2490
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 196 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 255 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 256 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 315 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 316 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 375 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 376 atctgccgaagctgtgggat 395 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 333 bits (168), Expect = 3e-88 Identities = 312/360 (86%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 407 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Score = 165 bits (83), Expect = 2e-37 Identities = 117/127 (92%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 73 |||||||||||||||||||||||||||||||||||| ||| | ||| | || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggta 874 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 875 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 934 Query: 134 agatatg 140 | ||||| Sbjct: 935 aaatatg 941
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 317 bits (160), Expect = 2e-83 Identities = 160/160 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 101 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 41 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtg 174 |||||||||||||||||||||||||||||||||||||||| Sbjct: 40 gatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 317 bits (160), Expect = 2e-83 Identities = 175/180 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47070 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 47129 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 47130 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 47189 Query: 135 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47190 gatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 47249
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 167 bits (84), Expect = 5e-38 Identities = 118/128 (92%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggta 73 |||||||||||||||||||||||||||||||||||| |||||| || | |||||||| Sbjct: 1218 ctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggta 1277 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1278 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1337 Query: 134 agatatga 141 ||| |||| Sbjct: 1338 agacatga 1345 Score = 131 bits (66), Expect = 3e-27 Identities = 108/122 (88%) Strand = Plus / Plus Query: 406 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 465 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 526 ac 527 || Sbjct: 1721 ac 1722
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 293 bits (148), Expect = 3e-76 Identities = 309/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 349 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 407 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 127 gaatact 133 ||||||| Sbjct: 917 gaatact 923 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 803 ctagctggttctccccgaaatgcgttgaggcgcagc 838
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 293 bits (148), Expect = 3e-76 Identities = 309/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 349 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 407 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 127 gaatact 133 ||||||| Sbjct: 930 gaatact 936 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 816 ctagctggttctccccgaaatgcgttgaggcgcagc 851
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 293 bits (148), Expect = 3e-76 Identities = 309/360 (85%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 349 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 407 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 127 gaatact 133 ||||||| Sbjct: 5504 gaatact 5510 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 5390 ctagctggttctccccgaaatgcgttgaggcgcagc 5425
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 293 bits (148), Expect = 3e-76 Identities = 307/359 (85%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 190228 Score = 293 bits (148), Expect = 3e-76 Identities = 307/359 (85%), Gaps = 2/359 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 151655 Score = 141 bits (71), Expect = 3e-30 Identities = 108/119 (90%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-ta 73 |||||||||||||||||||||| ||||||||||||| ||||| |||| |||| || Sbjct: 189738 ctagctggttctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggta 189797 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189798 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 141 bits (71), Expect = 3e-30 Identities = 108/119 (90%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-ta 73 |||||||||||||||||||||| ||||||||||||| ||||| |||| |||| || Sbjct: 151165 ctagctggttctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggta 151224 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151225 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 133 bits (67), Expect = 6e-28 Identities = 111/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctagggg 71 |||||||||||||||||||||||||||||||||||| ||| || || |||||||| Sbjct: 826 ctagctggttctccccgaaatgcgttgaggcgcagcggttaatgatgggcggtctagggg 885 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 886 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaata 945 Query: 132 ctaga 136 ||||| Sbjct: 946 ctaga 950 Score = 121 bits (61), Expect = 2e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 523 aaaac 527 ||||| Sbjct: 1359 aaaac 1363 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 atcggtaggggagcgttccgc 426 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 7e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 165 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 224 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 225 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 284 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 285 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 344 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 345 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 404 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 405 catcggtaggggagcgttccgc 426 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 121 bits (61), Expect = 2e-24 Identities = 110/125 (88%), Gaps = 6/125 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact-----ggaca-tctag 68 |||||||||||||||||||||||||||||||||||| || || | || || ||||| Sbjct: 809 ctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctag 868 Query: 69 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 128 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || Sbjct: 869 gggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaaga 928 Query: 129 atact 133 ||||| Sbjct: 929 atact 933 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 519 cccgaaaac 527 |||||||| Sbjct: 1300 tccgaaaac 1308
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 303/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 189305 Score = 274 bits (138), Expect = 3e-70 Identities = 303/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaac 150862 Score = 149 bits (75), Expect = 1e-32 Identities = 112/122 (91%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg--acatctaggggt 72 |||||||||||||||||||||| ||||||||||||| ||||| || | | ||||||| Sbjct: 188815 ctagctggttctccccgaaatgtgttgaggcgcagcggttga-tgcttaaacttaggggt 188873 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 188874 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 188933 Query: 133 ta 134 || Sbjct: 188934 ta 188935 Score = 149 bits (75), Expect = 1e-32 Identities = 112/122 (91%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg--acatctaggggt 72 |||||||||||||||||||||| ||||||||||||| ||||| || | | ||||||| Sbjct: 150372 ctagctggttctccccgaaatgtgttgaggcgcagcggttga-tgcttaaacttaggggt 150430 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 150431 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 150490 Query: 133 ta 134 || Sbjct: 150491 ta 150492
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 128 aatac 132 ||||| Sbjct: 550 aatac 554 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttg 55 |||||||||||||||||||||| ||||||||||||| |||| Sbjct: 436 ctagctggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaa 498 |||| ||||||||||||||||||| |||||| Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaa 903
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 147 bits (74), Expect = 4e-32 Identities = 110/122 (90%) Strand = Plus / Plus Query: 406 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 465 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 526 ac 527 || Sbjct: 1530 ac 1531 Score = 145 bits (73), Expect = 2e-31 Identities = 114/125 (91%), Gaps = 2/125 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tggaca-tctaggggt 72 |||||||||||||||||||||||||||||||||||| ||| || ||| | ||||||||| Sbjct: 964 ctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggt 1023 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 1024 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatac 1083 Query: 133 tagat 137 ||||| Sbjct: 1084 tagat 1088
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 149 bits (75), Expect = 1e-32 Identities = 114/125 (91%), Gaps = 4/125 (3%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggg 70 |||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||| Sbjct: 818 ctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggg 877 Query: 71 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 130 |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||| Sbjct: 878 gtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaat 937 Query: 131 actag 135 ||||| Sbjct: 938 actag 942 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1328 cccgaaaac 1336 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 atcggtaggggagcgttccgc 426 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 147 bits (74), Expect = 4e-32 Identities = 107/118 (90%) Strand = Plus / Plus Query: 408 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 467 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1309 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 63 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 122 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 123 ctctgaatactagata 138 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 807 ctagctggttctccccgaaatgcgttgaggcgcagc 842
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 406 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 407 tcggtaggggagcgttccg 425 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 119 bits (60), Expect = 1e-23 Identities = 111/126 (88%), Gaps = 4/126 (3%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggaca-tctaggg 70 |||||||||||||||||||||||||||||||||||| ||| || | | | ||||||| Sbjct: 816 ctagctggttctccccgaaatgcgttgaggcgcagcggttgatgattaggctgtctaggg 875 Query: 71 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 130 ||| |||||||| ||||||||||||||| |||||||||||||||| |||||||| |||| Sbjct: 876 gtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccgaat 935 Query: 131 actaga 136 |||||| Sbjct: 936 actaga 941 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 524 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 525 a 525 | Sbjct: 1312 a 1312
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 390 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 390 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 127 gaatact 133 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaac 170176 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaac 122750 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 127 gaatact 133 ||||||| Sbjct: 122369 gaatact 122375 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||| ||||||||||||||||||||||||||| Sbjct: 170690 ctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||| ||||||||||||||||||||||||||| Sbjct: 122236 ctagctggatctccccgaaatgcgttgaggcgcagc 122271
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 407 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 408 cggtaggggagcgttccg 425 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 89.7 bits (45), Expect = 9e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 473 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3007 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 128 aatac 132 ||||| Sbjct: 2630 aatac 2634 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 2516 ctagctggttctccccgaaatgtgttgaggcgcagc 2551
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 250 bits (126), Expect = 4e-63 Identities = 300/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Minus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 17738 Score = 250 bits (126), Expect = 4e-63 Identities = 300/357 (84%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 410 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 411 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 470 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 471 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 3128 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 66 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 124 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 125 ctgaatacta 134 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 66 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 124 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 125 ctgaatacta 134 |||||||||| Sbjct: 2748 ctgaatacta 2757 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||| ||||||||||||||||||||||||||| Sbjct: 18230 ctagctggatctccccgaaatgcgttgaggcgcagc 18195 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||| ||||||||||||||||||||||||||| Sbjct: 2636 ctagctggatctccccgaaatgcgttgaggcgcagc 2671
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 390 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 93.7 bits (47), Expect = 6e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaac 1341 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 127 gaatact 133 ||||||| Sbjct: 960 gaatact 966 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||| ||||||||||||||||||||||||||| Sbjct: 827 ctagctggatctccccgaaatgcgttgaggcgcagc 862
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 128 aatac 132 ||||| Sbjct: 548 aatac 552 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| |||||||| |||| Sbjct: 434 ctagctggttctccccgaaatgtgttgaggcacagc 469 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 465 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 ||||||| ||||||||||||||||||| || ||| | ||||||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcc 911
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 393 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 131 bits (66), Expect = 3e-27 Identities = 112/125 (89%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggaca-tctagggg 71 |||||||| ||||||||||||||||||||||||||| ||| || ||| | |||||||| Sbjct: 949 ctagctggatctccccgaaatgcgttgaggcgcagcggttaacgatgggctgtctagggg 1008 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 1009 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaata 1068 Query: 132 ctaga 136 ||||| Sbjct: 1069 ctaga 1073 Score = 121 bits (61), Expect = 2e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 523 aaaac 527 ||||| Sbjct: 1454 aaaac 1458
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 128 aatac 132 ||||| Sbjct: 547 aatac 551 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 433 ctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 128 aatac 132 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 128 aatac 132 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 128 aatac 132 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 128 aatac 132 ||||| Sbjct: 1005844 aatac 1005848 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 5434551 ctagctggttctccccgaaatgtgttgaggcgcagc 5434516 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 3896887 ctagctggttctccccgaaatgtgttgaggcgcagc 3896922 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 2807272 ctagctggttctccccgaaatgtgttgaggcgcagc 2807237 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 1005730 ctagctggttctccccgaaatgtgttgaggcgcagc 1005765
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 128 aatac 132 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 128 aatac 132 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 128 aatac 132 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 128 aatac 132 ||||| Sbjct: 2378672 aatac 2378676 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 5944591 ctagctggttctccccgaaatgtgttgaggcgcagc 5944556 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 4916947 ctagctggttctccccgaaatgtgttgaggcgcagc 4916912 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 2503349 ctagctggttctccccgaaatgtgttgaggcgcagc 2503384 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 2378558 ctagctggttctccccgaaatgtgttgaggcgcagc 2378593
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 244 bits (123), Expect = 2e-61 Identities = 319/383 (83%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 145 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 204 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 205 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 264 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 265 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 324 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 325 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 384 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 385 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 444 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 445 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 504 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 505 tgagaatccaatgccccgaaaac 527 ||||||||||| |||| ||||| Sbjct: 1298 cgagaatccaattccccaaaaac 1320 Score = 127 bits (64), Expect = 4e-26 Identities = 113/128 (88%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 ||||||||||| ||||||||||| || ||||||||||||| || || ||||||||||||| Sbjct: 806 ctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctaggggtaa 864 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||| ||||| |||||||| || |||||||||||||| |||||| ||| ||||||||| Sbjct: 865 agcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaatacta 924 Query: 135 gatatgac 142 |||||||| Sbjct: 925 gatatgac 932
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1342 cccgaaaac 1350 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 64 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 123 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 124 tctgaatactaga 136 || |||||||||| Sbjct: 944 tcagaatactaga 956 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 832 ctagctggttctccccgaaatgcgttgaggcgcagc 867
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 3111 cccgaaaac 3119 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 64 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 123 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 124 tctgaatactaga 136 || |||||||||| Sbjct: 2713 tcagaatactaga 2725 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 2601 ctagctggttctccccgaaatgcgttgaggcgcagc 2636
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 87.7 bits (44), Expect = 3e-14 Identities = 103/121 (85%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag---ggg 71 |||||||||||||||||||||| ||||||||||||| || | |||| | ||| ||| Sbjct: 2349 ctagctggttctccccgaaatgtgttgaggcgcagcggtag--tggaagtttagtcgggg 2406 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||| |||||||| | || ||||||||| |||||||||||||||||| Sbjct: 2407 taaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaata 2466 Query: 132 c 132 | Sbjct: 2467 c 2467 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcc 2823
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 519 cccgaaa 525 ||||||| Sbjct: 919 cccgaaa 925 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 127 gaatact 133 ||||||| Sbjct: 546 gaatact 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 433 ctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 145 bits (73), Expect = 2e-31 Identities = 113/125 (90%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggta 73 |||||||||||||||||||||||||||||||||||| ||| | | | | |||||||| Sbjct: 807 ctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgtttaggggta 866 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 867 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatact 926 Query: 134 agata 138 ||||| Sbjct: 927 agata 931 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1298 cccgaaaac 1306
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 145 bits (73), Expect = 2e-31 Identities = 113/125 (90%), Gaps = 1/125 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggta 73 |||||||||||||||||||||||||||||||||||| ||| | | | | |||||||| Sbjct: 25616 ctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgtttaggggta 25675 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 25676 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatact 25735 Query: 134 agata 138 ||||| Sbjct: 25736 agata 25740 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 26107 cccgaaaac 26115
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 348 ttgcgctgaagatgaacggggctaag 373 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 519 cccgaaa 525 || |||| Sbjct: 920 cctgaaa 926 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 128 aatactagat 137 ||||| |||| Sbjct: 547 aataccagat 556 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 433 ctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 9e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 403 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 404 gcatcggtaggggagcgttccg 425 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 128 aatac 132 ||||| Sbjct: 547 aatac 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||| ||||||||| Sbjct: 433 ctagctggttctccccgaaatgtgtttaggcgcagc 468 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 519 cccgaaa 525 ||||||| Sbjct: 921 cccgaaa 927
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 87.7 bits (44), Expect = 3e-14 Identities = 103/121 (85%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag---ggg 71 |||||||||||||||||||||| ||||||||||||| || | |||| | ||| ||| Sbjct: 433 ctagctggttctccccgaaatgtgttgaggcgcagcggtag--tggaagtttagtcgggg 490 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||| |||||||| | || ||||||||| |||||||||||||||||| Sbjct: 491 taaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaata 550 Query: 132 c 132 | Sbjct: 551 c 551 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcc 906
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 519 cccgaaa 525 ||||||| Sbjct: 919 cccgaaa 925 Score = 101 bits (51), Expect = 2e-18 Identities = 106/121 (87%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-ggg 71 |||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | ||| Sbjct: 433 ctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctgggggg 490 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||| Sbjct: 491 taaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaata 550 Query: 132 c 132 | Sbjct: 551 c 551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 atcggtaggggagcgttccg 425 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 95.6 bits (48), Expect = 1e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 128 aatac 132 ||||| Sbjct: 547 aatac 551 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 433 ctagctggttctccccgaaatgtgttgaggcgcagc 468
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Minus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||| |||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaac 2050555 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 ||| |||||||| |||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaac 1450946 Score = 77.8 bits (39), Expect = 3e-11 Identities = 89/103 (86%), Gaps = 2/103 (1%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg-acatctaggggta 73 |||||||||||||||||||||||||||||||||||| || ||| || || | |||||| Sbjct: 2051037 ctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggtacctggtggggta 2050979 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 116 ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050978 gagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 77.8 bits (39), Expect = 3e-11 Identities = 89/103 (86%), Gaps = 2/103 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg-acatctaggggta 73 |||||||||||||||||||||||||||||||||||| || ||| || || | |||||| Sbjct: 1450464 ctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggtacctggtggggta 1450522 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 116 ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450523 gagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 137800 cccgaaaac 137808 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 47744 cccgaaaac 47736 Score = 91.7 bits (46), Expect = 2e-15 Identities = 105/124 (84%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctagggg 71 ||||||||||||| ||||||| ||||||||||||| |||| || || |||||||| Sbjct: 137302 ctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctagggg 137361 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||| | | |||||||||||| |||||||| ||||| Sbjct: 137362 taaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaata 137421 Query: 132 ctag 135 |||| Sbjct: 137422 ctag 137425 Score = 91.7 bits (46), Expect = 2e-15 Identities = 105/124 (84%), Gaps = 3/124 (2%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctagggg 71 ||||||||||||| ||||||| ||||||||||||| |||| || || |||||||| Sbjct: 48242 ctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctagggg 48183 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||| | | |||||||||||| |||||||| ||||| Sbjct: 48182 taaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaata 48123 Query: 132 ctag 135 |||| Sbjct: 48122 ctag 48119
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 349 tgcgctgaagatgaacggggctaag 373 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 128 aatac 132 ||||| Sbjct: 548 aatac 552 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 434 ctagctggttctccccgaaatgcgttgaggcgcagc 469 Score = 69.9 bits (35), Expect = 8e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcc 911
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 393 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 129 bits (65), Expect = 1e-26 Identities = 111/124 (89%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggaca-tctagggg 71 |||||||||||||||||||||||||||||||||||| ||||| || | |||||||| Sbjct: 882 ctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctagggg 941 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 942 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaata 1001 Query: 132 ctag 135 |||| Sbjct: 1002 ctag 1005 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1492 cccgaaaac 1500
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 224 bits (113), Expect = 2e-55 Identities = 302/361 (83%), Gaps = 3/361 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 227 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 348 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 406 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 407 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 466 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 467 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 526 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 527 c 527 | Sbjct: 1312 c 1312 Score = 155 bits (78), Expect = 2e-34 Identities = 113/124 (91%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 71 |||||||||||||||||||||||||||||||||||| || | | || ||||||||| Sbjct: 812 ctagctggttctccccgaaatgcgttgaggcgcagcggtgggtttagggctatctagggg 871 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 872 taaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctgaata 931 Query: 132 ctag 135 |||| Sbjct: 932 ctag 935
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 79.8 bits (40), Expect = 8e-12 Identities = 102/121 (84%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag---ggg 71 |||||||||||||||||||||| ||||||||||||| || | |||| | ||| ||| Sbjct: 2348 ctagctggttctccccgaaatgtgttgaggcgcagcggtag--tggaagtttagtcgggg 2405 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||| |||||||| | || |||||||| |||||||||||||||||| Sbjct: 2406 taaagcactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactctgaata 2465 Query: 132 c 132 | Sbjct: 2466 c 2466 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcc 2822
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 93.7 bits (47), Expect = 6e-16 Identities = 105/121 (86%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-ggg 71 |||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | ||| Sbjct: 433 ctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgggggg 490 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||| | || ||||||||||||||| ||||||| ||||| Sbjct: 491 taaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaata 550 Query: 132 c 132 | Sbjct: 551 c 551 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagta 491 |||||| ||||||||||||||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagta 893
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/120 (84%), Gaps = 2/120 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg--t 72 |||||||||||||||||||||| ||| ||||||||| |||| | || || |||| | Sbjct: 3327831 ctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagtcaacttggggggt 3327890 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| |||||| Sbjct: 3327891 aaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcagaatac 3327950 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/120 (84%), Gaps = 2/120 (1%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg--t 72 |||||||||||||||||||||| ||| ||||||||| |||| | || || |||| | Sbjct: 2450897 ctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagtcaacttggggggt 2450838 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| |||||| Sbjct: 2450837 aaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcagaatac 2450778 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 3328319 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 2450409
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 2313589 cccgaaaac 2313597 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1108258 cccgaaaac 1108250 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 2313115 ctagctggttctccccgaaatgcgttgaggcgcagc 2313150 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 1108732 ctagctggttctccccgaaatgcgttgaggcgcagc 1108697
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 115 bits (58), Expect = 2e-22 Identities = 108/124 (87%), Gaps = 3/124 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctagggg 71 |||||||||||||||||||||||||||||||||||| |||| || || |||||||| Sbjct: 792 ctagctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctagggg 851 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 |||||||||||||||||||||||| || || |||||||||||| ||||||| ||||| Sbjct: 852 taaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaata 911 Query: 132 ctag 135 |||| Sbjct: 912 ctag 915 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 463 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 522 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 523 aaaac 527 ||||| Sbjct: 1296 aaaac 1300 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 atcggtaggggagcgttccg 425 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 348 ttgcgctgaagatgaacggggctaag 373 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 519 cccgaaa 525 || |||| Sbjct: 918 cctgaaa 924 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 128 aatactagat 137 ||||| |||| Sbjct: 547 aataccagat 556 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||||||||||||| Sbjct: 433 ctagctggttctccccgaaatgtgttgaggcgcagc 468
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 128 aatac 132 ||||| Sbjct: 2333890 aatac 2333886 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 519 cccgaaa 525 ||||||| Sbjct: 2333521 cccgaaa 2333515 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggc 45 ||||||||||||||||||||| |||||||| Sbjct: 2334004 ctagctggttctccccgaaatatgttgaggc 2333974
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 181 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 240 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 241 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 300 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 301 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 360 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 361 gaacggggctaagcgatctgccgaagctgtgggatgt 397 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 121 bits (61), Expect = 2e-24 Identities = 107/121 (88%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggta 73 |||||||||||||||||||||| ||||||||||||| ||| | | | || ||||||| Sbjct: 1264 ctagctggttctccccgaaatgtgttgaggcgcagcggttaagattataacttaggggta 1323 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 1324 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactaagaatact 1383 Query: 134 a 134 | Sbjct: 1384 a 1384 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1786 cccgaaaac 1794
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 101 bits (51), Expect = 2e-18 Identities = 106/121 (87%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-ggg 71 |||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | ||| Sbjct: 433 ctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctgggggg 490 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||| Sbjct: 491 taaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaata 550 Query: 132 c 132 | Sbjct: 551 c 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagta 491 |||||| |||||| ||||||||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagta 893
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagct 388 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1324 Score = 125 bits (63), Expect = 2e-25 Identities = 110/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 71 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 132 ctaga 136 ||||| Sbjct: 935 ctaga 939
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagct 388 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 409 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 468 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 469 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3206 Score = 125 bits (63), Expect = 2e-25 Identities = 110/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 71 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 132 ctaga 136 ||||| Sbjct: 2817 ctaga 2821
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 181 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 240 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 241 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 300 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 301 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 360 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 361 gaacggggctaagcgatctgccgaagctgtgggat 395 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1341 cccgaaaac 1349 Score = 87.7 bits (44), Expect = 3e-14 Identities = 105/123 (85%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggac-atctagggg 71 |||||||| ||||| ||||||| ||||||||||||| ||||| ||| | | |||||| Sbjct: 847 ctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctagttagggg 906 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||| Sbjct: 907 taaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaata 966 Query: 132 cta 134 ||| Sbjct: 967 cta 969
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 212 bits (107), Expect = 9e-52 Identities = 297/358 (82%), Gaps = 3/358 (0%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 409 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 410 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 469 |||||||||||||| | |||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctg-cttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 470 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 527 || ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaac 2994 Score = 131 bits (66), Expect = 3e-27 Identities = 106/120 (88%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 74 |||||||||||||||||||||||||||||||||||| ||||| | | ||||||||| Sbjct: 2506 ctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggtaa 2565 Query: 75 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 134 |||||||||||||||||||||||| || ||||||||||||| ||||||| |||||||| Sbjct: 2566 agcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatacta 2625
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 128 aatac 132 ||||| Sbjct: 547 aatac 551 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||| ||||||| |||||||| |||| Sbjct: 433 ctagctggttctcctcgaaatgtgttgaggcacagc 468 Score = 44.1 bits (22), Expect = 0.46 Identities = 40/46 (86%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 |||| |||||||||||||| |||| |||||| | ||||||||||| Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcc 911
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 350 gcgctgaagatgaacggggctaagc 374 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 519 cccgaaa 525 |||||| Sbjct: 907 tccgaaa 913 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 128 aatac 132 ||||| Sbjct: 545 aatac 549 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||| |||| |||| Sbjct: 431 ctagctggttctccccgaaatgtgtttaggcacagc 466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 109 bits (55), Expect = 9e-21 Identities = 104/119 (87%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggta 73 |||||||||||||||||||||| ||| ||||||||| || | |||||| ||||| Sbjct: 433 ctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggta 492 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 ||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 493 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 519 cccgaaa 525 ||||||| Sbjct: 915 cccgaaa 921
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 81.8 bits (41), Expect = 2e-12 Identities = 101/120 (84%), Gaps = 2/120 (1%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg--t 72 |||||||||||||||||||||| ||| ||||||||| |||| | || || |||| | Sbjct: 434 ctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagtcaacttggggggt 493 Query: 73 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| |||||| Sbjct: 494 aaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcagaatac 553 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaa 921
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1321 cccgaaaac 1329 Score = 85.7 bits (43), Expect = 1e-13 Identities = 104/122 (85%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggacatcta-gggg 71 |||||||| ||||| ||||||||||||||||||||| |||| | ||| | | || |||| Sbjct: 825 ctagctggatctcctcgaaatgcgttgaggcgcagcggttgtcgatgggcttttaagggg 884 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||| ||||||||| | ||||||||||||||| ||||||| ||||| Sbjct: 885 taaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaata 944 Query: 132 ct 133 || Sbjct: 945 ct 946
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 336 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 3059 cccgaaaac 3067 Score = 85.7 bits (43), Expect = 1e-13 Identities = 104/122 (85%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggacatcta-gggg 71 |||||||| ||||| ||||||||||||||||||||| |||| | ||| | | || |||| Sbjct: 2563 ctagctggatctcctcgaaatgcgttgaggcgcagcggttgtcgatgggcttttaagggg 2622 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||| ||||||||| | ||||||||||||||| ||||||| ||||| Sbjct: 2623 taaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaata 2682 Query: 132 ct 133 || Sbjct: 2683 ct 2684
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 127 gaatact 133 ||||||| Sbjct: 545 gaatact 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||| ||||||||| Sbjct: 432 ctagctggttctccccgaaatgtgtttaggcgcagc 467 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaa 927
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 395 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 127 gaatact 133 ||||||| Sbjct: 545 gaatact 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||| ||| ||||||||| Sbjct: 432 ctagctggttctccccgaaatgtgtttaggcgcagc 467 Score = 44.1 bits (22), Expect = 0.46 Identities = 49/58 (84%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaa 927
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 8e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 67 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||| Sbjct: 874 aggggtaaagcactgtttcggtgcgggctgcgaaagtggtaccaaatcgtagcaaactca 933 Query: 127 gaatact 133 ||||||| Sbjct: 934 gaatact 940 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||| |||||| |||||||||||||||||||| Sbjct: 820 ctagctggatctccctgaaatgcgttgaggcgcagc 855 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacg 494 |||| |||||||||||||||||||||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacg 1285
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 397 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 397 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 153 bits (77), Expect = 7e-34 Identities = 111/121 (91%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggta 73 |||||||||||||||||||||| ||||||||||||| ||||| | | || ||||||| Sbjct: 114616 ctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggta 114557 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 114556 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 114497 Query: 134 a 134 | Sbjct: 114496 a 114496 Score = 153 bits (77), Expect = 7e-34 Identities = 111/121 (91%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatct-aggggta 73 |||||||||||||||||||||| ||||||||||||| ||||| | | || ||||||| Sbjct: 2901 ctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggta 2960 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 133 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2961 aagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 3020 Query: 134 a 134 | Sbjct: 3021 a 3021 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 526 ac 527 || Sbjct: 114116 ac 114115 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 466 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 526 ac 527 || Sbjct: 3401 ac 3402 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 catcggtaggggagcgttccg 425 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 405 catcggtaggggagcgttccg 425 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 392 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 101 bits (51), Expect = 2e-18 Identities = 103/119 (86%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg-ta 73 |||||||||||||| ||||||| |||||||| |||| |||| ||| || |||| || Sbjct: 433 ctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagctggggggta 492 Query: 74 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 132 |||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 493 aagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcagaatac 551 Score = 99.6 bits (50), Expect = 9e-18 Identities = 56/58 (96%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 923
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 202 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 261 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 262 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 320 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 321 gcgtaatagctcactg 336 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 5e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 350 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 408 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 409 ggtaggggagcgttc 423 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 3041 cccgaaaac 3049 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||| ||||||||| Sbjct: 2555 ctagctggttctccccgaaatgcgtttaggcgcagc 2590
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 181 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 240 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 241 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 300 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 301 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 360 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 361 gaacggggctaagcgatctgccgaagctgtgggat 395 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 181 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 240 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 241 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 300 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 301 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 360 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 361 gaacggggctaagcgatctgccgaagctgtgggat 395 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 454 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 514 aatgccccgaaaac 527 |||| ||||||||| Sbjct: 193167 aatgtcccgaaaac 193180 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 454 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 513 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 514 aatgccccgaaaac 527 |||| ||||||||| Sbjct: 143615 aatgtcccgaaaac 143602 Score = 95.6 bits (48), Expect = 1e-16 Identities = 106/123 (86%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggac-atctagggg 71 |||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || |||||| Sbjct: 192678 ctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttagggg 192737 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||| Sbjct: 192738 taaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaata 192797 Query: 132 cta 134 ||| Sbjct: 192798 cta 192800 Score = 95.6 bits (48), Expect = 1e-16 Identities = 106/123 (86%), Gaps = 3/123 (2%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttgac--tggac-atctagggg 71 |||||||| ||||| ||||||| ||||||||||||| ||||| ||| | || |||||| Sbjct: 144104 ctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgatgggctatttagggg 144045 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| |||||||| |||||| ||||||| ||||| Sbjct: 144044 taaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaagaata 143985 Query: 132 cta 134 ||| Sbjct: 143984 cta 143982
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 348 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 394 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 465 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 524 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 525 a 525 | Sbjct: 1335 a 1335 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 64 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 123 |||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 882 tctaggggtaaagctctgtttcgatgcgggctgcgaaagcggtaccaaatcgtggcaaac 941 Query: 124 tctgaatactaga 136 | |||||||||| Sbjct: 942 taagaatactaga 954 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 |||||||||||||||||||||||||||||||||||| Sbjct: 830 ctagctggttctccccgaaatgcgttgaggcgcagc 865 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 tcggtaggggagcgttccgcc 427 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 348 ttgcgctgaagatgaacggggctaag 373 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 348 ttgcgctgaagatgaacggggctaag 373 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 519 cccgaaa 525 ||||||| Sbjct: 1659793 cccgaaa 1659799 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 519 cccgaaa 525 ||||||| Sbjct: 1048951 cccgaaa 1048945 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 128 aatac 132 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 128 aatac 132 ||||| Sbjct: 1049320 aatac 1049316 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||||||||| Sbjct: 1659310 ctagctggttctccccgaaatacgttgaggcg 1659341 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||||||||| Sbjct: 1049434 ctagctggttctccccgaaatacgttgaggcg 1049403
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 169 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 228 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 229 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 288 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 289 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 348 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 349 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 408 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 409 ggtaggggagcgttccgc 426 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 121 bits (61), Expect = 2e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 519 cccgaaaac 527 ||||||||| Sbjct: 1285 cccgaaaac 1293 Score = 119 bits (60), Expect = 1e-23 Identities = 107/122 (87%), Gaps = 3/122 (2%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagcagttg---actggacatctagggg 71 |||||||| ||||||||||||||||||||||||||| |||| | || | || ||||| Sbjct: 795 ctagctggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaagggg 854 Query: 72 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 131 ||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 855 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 914 Query: 132 ct 133 || Sbjct: 915 ct 916
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 348 ttgcgctgaagatgaacggggctaag 373 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 519 cccgaaa 525 ||||||| Sbjct: 1555 cccgaaa 1561 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 128 aatac 132 ||||| Sbjct: 1186 aatac 1190 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||||||||| Sbjct: 1072 ctagctggttctccccgaaatacgttgaggcg 1103
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 348 ttgcgctgaagatgaacggggctaag 373 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 168 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 227 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 228 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 287 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 288 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 347 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 348 ttgcgctgaagatgaacggggctaag 373 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 519 cccgaaa 525 ||||||| Sbjct: 2656993 cccgaaa 2656987 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 519 cccgaaa 525 ||||||| Sbjct: 571928 cccgaaa 571934 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 128 aatac 132 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 128 aatac 132 ||||| Sbjct: 571559 aatac 571563 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||||||||| Sbjct: 2657476 ctagctggttctccccgaaatacgttgaggcg 2657445 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||||||||| Sbjct: 571445 ctagctggttctccccgaaatacgttgaggcg 571476
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 8e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 171 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 230 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 231 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 290 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 291 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 350 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 351 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 391 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 124 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 878 ggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtagcaaact 934 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 500 |||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 1255 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaaca 1296 Score = 48.1 bits (24), Expect = 0.029 Identities = 33/36 (91%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcgcagc 50 ||||||||||||||||||||||| || ||| ||||| Sbjct: 822 ctagctggttctccccgaaatgcatttaggtgcagc 857
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 8e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 170 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 229 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 230 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 289 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 290 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 349 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 350 gcgctgaagatgaacggggctaagc 374 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 459 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 518 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 519 cccgaaa 525 |||||| Sbjct: 1569479 tccgaaa 1569473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 68 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 127 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1569901 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagccaaactccg 1569842 Query: 128 aatac 132 ||||| Sbjct: 1569841 aatac 1569837 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 16 tagctggttctccccgaaatgcgttgaggcgcagc 50 ||||||||||||||||||||| ||| |||| |||| Sbjct: 1569954 tagctggttctccccgaaatgtgtttaggcacagc 1569920
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 192 bits (97), Expect = 8e-46 Identities = 181/209 (86%) Strand = Plus / Plus Query: 181 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 240 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 241 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 300 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 301 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 360 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3351 Query: 361 gaacggggctaagcgatctgccgaagctg 389 ||||||||||||||| | | ||||||||| Sbjct: 3352 gaacggggctaagcgttttaccgaagctg 3380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 68 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 126 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 127 gaatac 132 |||||| Sbjct: 3139 gaatac 3144 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 3453 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 3510 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||| ||||| Sbjct: 3025 ctagctggttctccccgaaatacgtttaggcg 3056
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 70 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 129 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 59055 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 58996 Query: 130 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 189 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 58995 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 58937 Query: 190 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 235 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 58936 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 58890 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 224 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 277 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 58891 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 58832 Query: 278 acagccaggaggtttgcctagaagcagccaccctttaaagag 319 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58831 acaaccaggaggtttgcctagaagcagccaccctttaaagag 58790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 385 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 431 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 58791 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 58745
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 70 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 129 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 136266 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 136207 Query: 130 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 189 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 136206 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 136148 Query: 190 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 235 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 136147 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 136101 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 224 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 277 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 136102 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 136043 Query: 278 acagccaggaggtttgcctagaagcagccaccctttaaagag 319 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136042 acaaccaggaggtttgcctagaagcagccaccctttaaagag 136001 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 385 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 431 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136002 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 135956
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 181 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 240 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 241 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 300 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 301 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 360 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 320733 Query: 361 gaacggggctaagcgatctgccgaagctg 389 ||||||||||||||| | | ||||||||| Sbjct: 320734 gaacggggctaagcgttataccgaagctg 320762 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 468 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 525 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 320838 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaa 320895 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 15 ctagctggttctccccgaaatgcgttgaggcg 46 ||||||||||||||||||||| |||||||||| Sbjct: 320407 ctagctggttctccccgaaatacgttgaggcg 320438 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 82 tttcggtgcgggctgcgcgagcggtaccaaatcga 116 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,074,667 Number of Sequences: 3902068 Number of extensions: 3074667 Number of successful extensions: 58850 Number of sequences better than 10.0: 2377 Number of HSP's better than 10.0 without gapping: 2408 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 44026 Number of HSP's gapped (non-prelim): 14162 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
