ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16h15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071900.1| Oryza sativa (japonica cultivar-group) cDNA clon... 188 9e-45
2ref|NM_188596.1| Oryza sativa (japonica cultivar-group), predic... 180 2e-42
3dbj|AK061937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
4dbj|AK066024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 2e-42
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
6dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
7dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
8gb|AY106313.1| Zea mays PCO145155 mRNA sequence 80 6e-12
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
10dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
11dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
12dbj|AK101738.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
13dbj|AK058294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.022
14dbj|AK106136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
15gb|AC127465.3| Didelphis virginiana clone LB3-97M17, complete se... 42 1.3
16gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 42 1.3
17gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, c... 40 5.3
18ref|XM_654616.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.3
19gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's... 40 5.3
20ref|XM_447604.1| Candida glabrata CBS138 hypothetical protein (C... 40 5.3
21gb|AC128661.3| Mus musculus BAC clone RP24-567N23 from chromosom... 40 5.3
22emb|CR380955.1| Candida glabrata strain CBS138 chromosome I comp... 40 5.3
23gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Canc... 40 5.3
24gb|AC116026.1| Homo sapiens 3 BAC RP11-3F11 (Roswell Park Cancer... 40 5.3
25gb|AC097478.2| Homo sapiens BAC clone RP11-115D19 from 4, comple... 40 5.3
26gb|AC011411.4| Homo sapiens chromosome 5 clone CTB-78O21, comple... 40 5.3
27emb|AL844608.18| Mouse DNA sequence from clone RP23-27L22 on chr... 40 5.3
28gb|AC147138.3| Mus musculus BAC clone RP24-230H23 from 7, comple... 40 5.3
29gb|AC146616.3| Mus musculus BAC clone RP23-9A18 from 7, complete... 40 5.3
30emb|AL807386.14| Mouse DNA sequence from clone RP23-190K7 on chr... 40 5.3 
>dbj|AK071900.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057N07, full
           insert sequence
          Length = 1589

 Score =  188 bits (95), Expect = 9e-45
 Identities = 247/298 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcaagcactagtagatattgatgaccctacaagccaagattctaaaacagagccaa 60
           ||||||| ||||| ||||||||||| || ||||||| ||||||  |||| | ||||||||
Sbjct: 44  aagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagagccaa 103

                                                                       
Query: 61  atcaaagcaccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtat 120
             |||||  |||||| || ||| || |||||||||||||||||||||||||||||||| |
Sbjct: 104 gccaaagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgt 163

                                                                       
Query: 121 cgaatggctcagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctggg 180
           | ||||||||||||| | | ||||||||| | |||  |||| | ||||||||||||||||
Sbjct: 164 caaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctggg 223

                                                                       
Query: 181 atgataccccatccactgcagagaattcactggctcttgtcccggtcactgatccattgg 240
           |||| | |||||| ||  |||| |||||||| || |||||||| || ||||||||| | |
Sbjct: 224 atgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtag 283

                                                                     
Query: 241 ctgactctacttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
            ||| |||||| ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 284 ttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 341



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 359 tggatcacagccatacaacactggaacccagcatcct 395
           ||||||||||||||||||  ||  |||||||||||||
Sbjct: 405 tggatcacagccatacaatgctccaacccagcatcct 441
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>ref|NM_188596.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1524

 Score =  180 bits (91), Expect = 2e-42
 Identities = 246/298 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagagcaagcactagtagatattgatgaccctacaagccaagattctaaaacagagccaa 60
            ||||||| ||||| ||||||||||| || ||||||| ||||||  |||| | ||| ||||
Sbjct: 872  aagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaa 931

                                                                        
Query: 61   atcaaagcaccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtat 120
              |||||  |||||| || ||| || |||||||||||||||||||||||||||||||| |
Sbjct: 932  gccaaagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgt 991

                                                                        
Query: 121  cgaatggctcagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctggg 180
            | ||||||||||||| | | ||||||||| | |||  |||| | ||||||||||||||||
Sbjct: 992  caaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctggg 1051

                                                                        
Query: 181  atgataccccatccactgcagagaattcactggctcttgtcccggtcactgatccattgg 240
            |||| | |||||| ||  |||| |||||||| || |||||||| || ||||||||| | |
Sbjct: 1052 atgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtag 1111

                                                                      
Query: 241  ctgactctacttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
             ||| |||||| ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 1112 ttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 1169



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 359  tggatcacagccatacaacactggaacccagcatcct 395
            ||||||||||||||||||  ||  |||||||||||||
Sbjct: 1233 tggatcacagccatacaatgctccaacccagcatcct 1269
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>dbj|AK061937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D06, full
           insert sequence
          Length = 1972

 Score =  180 bits (91), Expect = 2e-42
 Identities = 246/298 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcaagcactagtagatattgatgaccctacaagccaagattctaaaacagagccaa 60
           ||||||| ||||| ||||||||||| || ||||||| ||||||  |||| | ||| ||||
Sbjct: 565 aagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaa 624

                                                                       
Query: 61  atcaaagcaccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtat 120
             |||||  |||||| || ||| || |||||||||||||||||||||||||||||||| |
Sbjct: 625 gccaaagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgt 684

                                                                       
Query: 121 cgaatggctcagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctggg 180
           | ||||||||||||| | | ||||||||| | |||  |||| | ||||||||||||||||
Sbjct: 685 caaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctggg 744

                                                                       
Query: 181 atgataccccatccactgcagagaattcactggctcttgtcccggtcactgatccattgg 240
           |||| | |||||| ||  |||| |||||||| || |||||||| || ||||||||| | |
Sbjct: 745 atgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtag 804

                                                                     
Query: 241 ctgactctacttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
            ||| |||||| ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 805 ttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 862



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 359 tggatcacagccatacaacactggaacccagcatcct 395
           ||||||||||||||||||  ||  |||||||||||||
Sbjct: 926 tggatcacagccatacaatgctccaacccagcatcct 962
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>dbj|AK066024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047G02, full
            insert sequence
          Length = 2599

 Score =  180 bits (91), Expect = 2e-42
 Identities = 246/298 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagagcaagcactagtagatattgatgaccctacaagccaagattctaaaacagagccaa 60
            ||||||| ||||| ||||||||||| || ||||||| ||||||  |||| | ||| ||||
Sbjct: 1034 aagagcaggcacttgtagatattgaggatcctacaacccaagagactaataaagaaccaa 1093

                                                                        
Query: 61   atcaaagcaccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtat 120
              |||||  |||||| || ||| || |||||||||||||||||||||||||||||||| |
Sbjct: 1094 gccaaagtgccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgt 1153

                                                                        
Query: 121  cgaatggctcagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctggg 180
            | ||||||||||||| | | ||||||||| | |||  |||| | ||||||||||||||||
Sbjct: 1154 caaatggctcagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctggg 1213

                                                                        
Query: 181  atgataccccatccactgcagagaattcactggctcttgtcccggtcactgatccattgg 240
            |||| | |||||| ||  |||| |||||||| || |||||||| || ||||||||| | |
Sbjct: 1214 atgacaacccatctacaacagaaaattcactagcgcttgtcccagttactgatccagtag 1273

                                                                      
Query: 241  ctgactctacttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
             ||| |||||| ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 1274 ttgattctactccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 1331



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 359  tggatcacagccatacaacactggaacccagcatcct 395
            ||||||||||||||||||  ||  |||||||||||||
Sbjct: 1395 tggatcacagccatacaatgctccaacccagcatcct 1431
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  155 bits (78), Expect = 1e-34
 Identities = 191/229 (83%)
 Strand = Plus / Plus

                                                                           
Query: 70      ccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtatcgaatggct 129
               |||||| || ||| || |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 7134686 ccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggct 7134745

                                                                           
Query: 130     cagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctgggatgataccc 189
               |||||| | | ||||||||| | |||  |||| | |||||||||||||||||||| | ||
Sbjct: 7134746 cagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacc 7134805

                                                                           
Query: 190     catccactgcagagaattcactggctcttgtcccggtcactgatccattggctgactcta 249
               |||| ||  |||| |||||||| || |||||||| || ||||||||| | | ||| ||||
Sbjct: 7134806 catctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattcta 7134865

                                                                
Query: 250     cttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
               || ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 7134866 ctccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 7134914



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 1       aagagcaagcactagtagatattgatgaccctacaagccaaga 43
               ||||||| ||||| ||||||||||| || ||||||| ||||||
Sbjct: 7133046 aagagcaggcacttgtagatattgaggatcctacaacccaaga 7133088



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 359     tggatcacagccatacaacactggaacccagcatcct 395
               ||||||||||||||||||  ||  |||||||||||||
Sbjct: 7134978 tggatcacagccatacaatgctccaacccagcatcct 7135014
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>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score =  155 bits (78), Expect = 1e-34
 Identities = 191/229 (83%)
 Strand = Plus / Plus

                                                                         
Query: 70    ccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtatcgaatggct 129
             |||||| || ||| || |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 29334 ccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggct 29393

                                                                         
Query: 130   cagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctgggatgataccc 189
             |||||| | | ||||||||| | |||  |||| | |||||||||||||||||||| | ||
Sbjct: 29394 cagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacc 29453

                                                                         
Query: 190   catccactgcagagaattcactggctcttgtcccggtcactgatccattggctgactcta 249
             |||| ||  |||| |||||||| || |||||||| || ||||||||| | | ||| ||||
Sbjct: 29454 catctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattcta 29513

                                                              
Query: 250   cttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
             || ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 29514 ctccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 29562



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 1     aagagcaagcactagtagatattgatgaccctacaagccaaga 43
             ||||||| ||||| ||||||||||| || ||||||| ||||||
Sbjct: 27694 aagagcaggcacttgtagatattgaggatcctacaacccaaga 27736



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 359   tggatcacagccatacaacactggaacccagcatcct 395
             ||||||||||||||||||  ||  |||||||||||||
Sbjct: 29626 tggatcacagccatacaatgctccaacccagcatcct 29662
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>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0452F10
          Length = 145120

 Score =  155 bits (78), Expect = 1e-34
 Identities = 191/229 (83%)
 Strand = Plus / Plus

                                                                          
Query: 70     ccagtgggccgtctccttttgagcaactagcgcttccagcacctccggtatcgaatggct 129
              |||||| || ||| || |||||||||||||||||||||||||||||||| || |||||||
Sbjct: 122266 ccagtgtgcagtcaccatttgagcaactagcgcttccagcacctccggtgtcaaatggct 122325

                                                                          
Query: 130    cagcaaacgctgcaccaaaacctgattctggcattgatcttcttagctgggatgataccc 189
              |||||| | | ||||||||| | |||  |||| | |||||||||||||||||||| | ||
Sbjct: 122326 cagcaaccccagcaccaaaatccgatcttggcgtcgatcttcttagctgggatgacaacc 122385

                                                                          
Query: 190    catccactgcagagaattcactggctcttgtcccggtcactgatccattggctgactcta 249
              |||| ||  |||| |||||||| || |||||||| || ||||||||| | | ||| ||||
Sbjct: 122386 catctacaacagaaaattcactagcgcttgtcccagttactgatccagtagttgattcta 122445

                                                               
Query: 250    cttcaaatcaaaatgcactggcaattgncgacatatattctcaaaacaa 298
              || ||| |||||||||||| || || |  |||||||  |||||||||||
Sbjct: 122446 ctccaagtcaaaatgcactagctatcgttgacatattctctcaaaacaa 122494



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 1      aagagcaagcactagtagatattgatgaccctacaagccaaga 43
              ||||||| ||||| ||||||||||| || ||||||| ||||||
Sbjct: 120626 aagagcaggcacttgtagatattgaggatcctacaacccaaga 120668



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 359    tggatcacagccatacaacactggaacccagcatcct 395
              ||||||||||||||||||  ||  |||||||||||||
Sbjct: 122558 tggatcacagccatacaatgctccaacccagcatcct 122594
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>gb|AY106313.1| Zea mays PCO145155 mRNA sequence
          Length = 1360

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 102/122 (83%), Gaps = 3/122 (2%)
 Strand = Plus / Plus

                                                                       
Query: 158 tggcattgatcttcttagctgggatgataccccatccactgcagagaattcactggctct 217
           ||||||||||||||| |||||||||||||||||  | || ||| | ||| |||| |||||
Sbjct: 851 tggcattgatcttctgagctgggatgatacccctgctacagcacaaaatccactagctct 910

                                                                       
Query: 218 tgtcccggtcactgatccattggctgactctacttca---aatcaaaatgcactggcaat 274
           ||| || ||||| |||||  | |||||||| ||||||   |||||||||||||| |||||
Sbjct: 911 tgttcctgtcacagatcctcttgctgactcgacttcatcgaatcaaaatgcactagcaat 970

             
Query: 275 tg 276
           ||
Sbjct: 971 tg 972



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                       
Query: 16  tagatattgatgaccctacaagccaagattctaaaacagagccaaatcaaagcaccagtg 75
           |||||||||| || || |||||||||||| ||  || ||||||||||||||| || ||||
Sbjct: 719 tagatattgaggatcccacaagccaagatgctgcaaaagagccaaatcaaagtacaagtg 778

                                                
Query: 76  ggccgtctccttttgagcaactagcgcttccagcacc 112
             |  ||||||||||||||| |||| |||||||||||
Sbjct: 779 accaatctccttttgagcaattagctcttccagcacc 815
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 82       ctccttttgagcaactagcgcttccagcacct 113
                |||| ||||||||| |||||||||||||||||
Sbjct: 13011939 ctccatttgagcaattagcgcttccagcacct 13011970
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>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0531C01
          Length = 158574

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 82    ctccttttgagcaactagcgcttccagcacct 113
             |||| ||||||||| |||||||||||||||||
Sbjct: 50740 ctccatttgagcaattagcgcttccagcacct 50771
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>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0577H07
          Length = 126757

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 82    ctccttttgagcaactagcgcttccagcacct 113
             |||| ||||||||| |||||||||||||||||
Sbjct: 94316 ctccatttgagcaattagcgcttccagcacct 94347
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>dbj|AK101738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061J09, full
            insert sequence
          Length = 2528

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 82   ctccttttgagcaactagcgcttccagcacct 113
            |||| ||||||||| |||||||||||||||||
Sbjct: 1073 ctccatttgagcaattagcgcttccagcacct 1104
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>dbj|AK058294.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F02, full
            insert sequence
          Length = 2291

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 82   ctccttttgagcaactagcgcttccagcacct 113
            |||| ||||||||| |||||||||||||||||
Sbjct: 1097 ctccatttgagcaattagcgcttccagcacct 1128
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>dbj|AK106136.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-G04, full
           insert sequence
          Length = 1173

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 359 tggatcacagccatacaacactggaacccagcatcct 395
           ||||||||||||||||||  ||  |||||||||||||
Sbjct: 102 tggatcacagccatacaatgctccaacccagcatcct 138
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>gb|AC127465.3| Didelphis virginiana clone LB3-97M17, complete sequence
          Length = 165669

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 191   atccactgcagagaattcact 211
             |||||||||||||||||||||
Sbjct: 24362 atccactgcagagaattcact 24382
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 191    atccactgcagagaattcact 211
              |||||||||||||||||||||
Sbjct: 162236 atccactgcagagaattcact 162256
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>gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, complete sequence
          Length = 155372

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    taaaacagagccaaatcaaa 66
             ||||||||||||||||||||
Sbjct: 28801 taaaacagagccaaatcaaa 28820
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>ref|XM_654616.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2104.2), mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 tccagcacctccggtatcga 123
           ||||||||||||||||||||
Sbjct: 626 tccagcacctccggtatcga 607
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>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 181157

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 348    agtcccactcttggatcacagccataca 375
              |||||||| ||||| |||||||||||||
Sbjct: 133341 agtcccacacttggctcacagccataca 133368
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>ref|XM_447604.1| Candida glabrata CBS138 hypothetical protein (CAGL0I08195g) partial
           mRNA
          Length = 1347

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 15  gtagatattgatgaccctac 34
           ||||||||||||||||||||
Sbjct: 463 gtagatattgatgaccctac 482
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>gb|AC128661.3| Mus musculus BAC clone RP24-567N23 from chromosome 7, complete sequence
          Length = 151249

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    attctaaaacagagccaaat 62
             ||||||||||||||||||||
Sbjct: 86094 attctaaaacagagccaaat 86075
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>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     gtagatattgatgaccctac 34
              ||||||||||||||||||||
Sbjct: 798355 gtagatattgatgaccctac 798374
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>gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132745

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tctaaaacagagccaaatca 64
             ||||||||||||||||||||
Sbjct: 62557 tctaaaacagagccaaatca 62576
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>gb|AC116026.1| Homo sapiens 3 BAC RP11-3F11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 90343

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tctaaaacagagccaaatca 64
             ||||||||||||||||||||
Sbjct: 20155 tctaaaacagagccaaatca 20174
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>gb|AC097478.2| Homo sapiens BAC clone RP11-115D19 from 4, complete sequence
          Length = 169484

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   atcacagccatacaacactg 381
             ||||||||||||||||||||
Sbjct: 98211 atcacagccatacaacactg 98230
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>gb|AC011411.4| Homo sapiens chromosome 5 clone CTB-78O21, complete sequence
          Length = 163864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    acagagccaaatcaaagcac 70
             ||||||||||||||||||||
Sbjct: 16989 acagagccaaatcaaagcac 17008
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>emb|AL844608.18| Mouse DNA sequence from clone RP23-27L22 on chromosome 2, complete
             sequence
          Length = 207035

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 237   ttggctgactctacttcaaatcaa 260
             |||||| |||||||||||||||||
Sbjct: 59861 ttggctaactctacttcaaatcaa 59838
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>gb|AC147138.3| Mus musculus BAC clone RP24-230H23 from 7, complete sequence
          Length = 189381

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     attctaaaacagagccaaat 62
              ||||||||||||||||||||
Sbjct: 179809 attctaaaacagagccaaat 179790
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>gb|AC146616.3| Mus musculus BAC clone RP23-9A18 from 7, complete sequence
          Length = 198813

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     attctaaaacagagccaaat 62
              ||||||||||||||||||||
Sbjct: 143779 attctaaaacagagccaaat 143798
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>emb|AL807386.14| Mouse DNA sequence from clone RP23-190K7 on chromosome 2, complete
              sequence
          Length = 183076

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    tgactctacttcaaatcaaa 261
              ||||||||||||||||||||
Sbjct: 155051 tgactctacttcaaatcaaa 155070


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,369,377
Number of Sequences: 3902068
Number of extensions: 3369377
Number of successful extensions: 59232
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59136
Number of HSP's gapped (non-prelim): 95
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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