ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd16h12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence Length = 1226 Score = 494 bits (249), Expect = e-136 Identities = 432/493 (87%) Strand = Plus / Minus Query: 55 gtcgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcggga 114 ||||||||||||| ||||||||| |||||||||||||||||||| |||| ||||||| || Sbjct: 1188 gtcgtccgaggcgtcgaaggtggcggtgccggagtcggtgctccgcaagcggaagcgcga 1129 Query: 115 ggagctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacgga 174 ||| | |||||| ||||||||||| |||||| | | |||||||||||||| | || Sbjct: 1128 ggaacagtgggccaccgagaagaaggagaaggccctagccgagaagaagaagtccatcga 1069 Query: 175 gaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacagga 234 || ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 1068 gagccgcaagctcatcttcacccgcgccaagcagtacgccgaggagtacgatgcccagga 1009 Query: 235 caaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcc 294 ||||| |||| |||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 1008 gaaggaactggtgcagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagtcc 949 Query: 295 tgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagac 354 |||||| ||| |||| ||||| ||||| ||| | |||||||||||||||||||| ||||| Sbjct: 948 tgaggcaaagctgctctttgtggtccgcatccgtggtatcaatgccatgcaccctaagac 889 Query: 355 caagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggt 414 || ||||||| | |||||| |||| ||||| ||||| |||||||| ||||||||||| || Sbjct: 888 caggaagatcttgcagcttctgcgattgaggcagatcttcaatggcgtgttcctcaaagt 829 Query: 415 taacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtaccc 474 |||||||| || || |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 828 caacaaggctactattaacatgctacgcagggttgagccatatgttgcatatgggtaccc 769 Query: 475 gaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagca 534 ||| |||||||||| |||||||||||||||||||| || ||||||||||| |||||||| Sbjct: 768 aaacttgaagagtgtcagggagttgatctacaagaggggctatggaaagctgaacaagca 709 Query: 535 aaggattcctctg 547 ||||| |||||| Sbjct: 708 gaggatccctctg 696
>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full insert sequence Length = 1040 Score = 482 bits (243), Expect = e-133 Identities = 439/505 (86%) Strand = Plus / Plus Query: 42 agctcgtcgngnagtcgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctca 101 ||||||||| | | ||||||||||||| |||||||||||||||||||| ||||||| || Sbjct: 105 agctcgtcgagatggcgtccgaggcggccaaggtggtggtgccggagtccgtgctccgca 164 Query: 102 agaggaagcgggaggagctctgggccgccgagaagaagaccaaggccgtcgaggagaaga 161 ||||||||||||||||| | ||||| |||| || ||| |||||||||| ||||||| Sbjct: 165 agaggaagcgggaggaggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaaga 224 Query: 162 agaagtcgacggagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagt 221 ||||||| | |||| ||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 225 agaagtccatcgagagccgcaagctcatcttctcccgcgccaagcagtacgccgaggagt 284 Query: 222 acgatgcacaggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggt 281 |||| || ||||| |||||| |||| || |||||||||||||| |||||||||||||| | Sbjct: 285 acgaggcccaggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtt 344 Query: 282 tctatgtcagtcctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgcca 341 |||||||||| ||||||| |||||||||||||| ||||| ||| | ||||||||||||| Sbjct: 345 tctatgtcagccctgaggaaaagttgctgtttgtggtccgtatccgtggtatcaatgcca 404 Query: 342 tgcacccaaagaccaagaagatcctccagcttttgcgtttgagacagatattcaatggag 401 ||||||| ||||||| |||||| | ||||| ||||||||||| ||||| || ||||||| Sbjct: 405 tgcacccgaagaccaggaagattttgcagctcttgcgtttgaggcagatctttaatggag 464 Query: 402 tgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttg 461 ||||| | ||||| ||||| |||||||| |||||||| |||||||| ||||||||||||| Sbjct: 465 tgttcttgaaggtcaacaaagccaccattaacatgctgcgcagggttgagccatatgttg 524 Query: 462 catatgggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaa 521 ||||||||||||| || |||||||||| | || |||||||||||||| || ||||||| Sbjct: 525 catatgggtacccaaatttgaagagtgtccgtgaattgatctacaagaggggctatggaa 584 Query: 522 agctcaacaagcaaaggattcctct 546 |||||||||||||||| || ||||| Sbjct: 585 agctcaacaagcaaagaatccctct 609
>ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 480 bits (242), Expect = e-132 Identities = 428/490 (87%) Strand = Plus / Plus Query: 57 cgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcgggagg 116 ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 64 Query: 117 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 176 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 65 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 124 Query: 177 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggaca 236 ||||||| |||||||| ||||||||||||||||||||||||||||||| || ||||| | Sbjct: 125 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacgaggcccaggaga 184 Query: 237 aggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctg 296 ||||| |||| || |||||||||||||| |||||||||||||| ||||||||||| |||| Sbjct: 185 aggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtcagccctg 244 Query: 297 aggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagacca 356 ||| |||||||||||||| ||||| ||| | |||||||||||||||||||| ||||||| Sbjct: 245 aggaaaagttgctgtttgtggtccgtatccgtggtatcaatgccatgcacccgaagacca 304 Query: 357 agaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggtta 416 |||||| | ||||| ||||||||||| ||||| || |||||||||||| | ||||| | Sbjct: 305 ggaagattttgcagctcttgcgtttgaggcagatctttaatggagtgttcttgaaggtca 364 Query: 417 acaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtacccga 476 |||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||| | Sbjct: 365 acaaagccaccattaacatgctgcgcagggttgagccatatgttgcatatgggtacccaa 424 Query: 477 acctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaa 536 | |||||||||| | || |||||||||||||| || |||||||||||||||||||||| Sbjct: 425 atttgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaa 484 Query: 537 ggattcctct 546 | || ||||| Sbjct: 485 gaatccctct 494
>gb|AY104655.1| Zea mays PCO101521 mRNA sequence Length = 1155 Score = 462 bits (233), Expect = e-127 Identities = 428/493 (86%) Strand = Plus / Plus Query: 55 gtcgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcggga 114 |||||||||||||| |||||||| ||||||||||||||| |||| |||| ||||||| || Sbjct: 63 gtcgtccgaggcggtgaaggtggcggtgccggagtcggtactccgcaagcggaagcgcga 122 Query: 115 ggagctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacgga 174 ||||| |||||||||||||||||| ||| || | | |||| ||||||||| | || Sbjct: 123 ggagcagtgggccgccgagaagaaggagaagtccctggccgagaggaagaagtccatcga 182 Query: 175 gaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacagga 234 |||||| ||| |||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 183 gaaccggaagctcatcttcacccgcgccaagcagtacgccgaggagtacgatgcccagga 242 Query: 235 caaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcc 294 ||||| |||| |||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 243 gaaggaactggtacagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagtcc 302 Query: 295 tgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagac 354 |||||| ||| |||| ||||| |||| ||| | ||||||||||||||||| || ||||| Sbjct: 303 tgaggcaaagctgctatttgtgatccgcatccgtggtatcaatgccatgcatcctaagac 362 Query: 355 caagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggt 414 || |||||| | |||||| |||||||||| |||||||||||||| |||||||| || || Sbjct: 363 caggaagatattgcagcttctgcgtttgaggcagatattcaatggcgtgttcctgaaagt 422 Query: 415 taacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtaccc 474 |||||||| ||||| |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 423 caacaaggctaccattaacatgcttcgcagggttgagccttatgttgcatatgggtaccc 482 Query: 475 gaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagca 534 |||| |||||||||| |||||||||||||||||||| || || ||||| || |||||||| Sbjct: 483 gaacttgaagagtgtcagggagttgatctacaagaggggctacggaaaactgaacaagca 542 Query: 535 aaggattcctctg 547 ||||| |||||| Sbjct: 543 gaggatccctctg 555
>gb|AY846828.1| Triticum aestivum ribosomal protein L7 mRNA, complete cds Length = 787 Score = 446 bits (225), Expect = e-122 Identities = 423/489 (86%) Strand = Plus / Plus Query: 59 tccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcgggaggag 118 ||||||||||||||||||| |||||| ||| |||| |||| ||||||| | |||| ||| Sbjct: 51 tccgaggcggcgaaggtggcggtgcccgagaaggtgatcctaaagaggaggagggaagag 110 Query: 119 ctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggagaac 178 |||||||||||||||||||| |||| | || ||||||| ||| | | |||||| Sbjct: 111 gtctgggccgccgagaagaagcagaaggttgccgccgagaagataaaggccgccgagaac 170 Query: 179 cgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaag 238 ||||||||||| ||||||||| |||||||||||| |||||| || || ||||||||| Sbjct: 171 accaaggtcatctacgcccgcgcggagcagtacgccggggagtatgaggcccaggacaag 230 Query: 239 gagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgag 298 ||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 gagctggtgcaacttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgag 290 Query: 299 gctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaag 358 || ||| ||||||||| ||||| ||| | ||||||||||| |||||||||||||||||| Sbjct: 291 gcaaagccgctgtttgtcgtccgtatccgtggtatcaatgcaatgcacccaaagaccaag 350 Query: 359 aagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaac 418 |||||| | ||||||||||||||||| ||||| || ||||| |||||||| ||||| ||| Sbjct: 351 aagatcttgcagcttttgcgtttgaggcagatttttaatggtgtgttccttaaggtcaac 410 Query: 419 aaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaac 478 ||||||||||| |||||||| || |||| |||||||||||| | || |||||||| ||| Sbjct: 411 aaggccaccattaacatgctgcgtcgggttgagccatatgttacctacgggtaccctaac 470 Query: 479 ctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagg 538 || |||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 471 ctcaagagtgtcagggagctgatctacaagagaggttacggaaagctcaacaagcaaagg 530 Query: 539 attcctctg 547 || |||||| Sbjct: 531 atccctctg 539
>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence Length = 922 Score = 434 bits (219), Expect = e-118 Identities = 420/487 (86%) Strand = Plus / Plus Query: 61 cgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcgggaggagct 120 ||||||| ||||||| | |||||||||||||||||||| |||| ||||||| ||||| | Sbjct: 4 cgaggcgtcgaaggtagcggtgccggagtcggtgctccgcaagcggaagcgcgaggaaca 63 Query: 121 ctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccg 180 |||||| ||||||||||| |||||| | | |||||||||||||| | |||| ||| Sbjct: 64 gtgggccaccgagaagaaggagaaggccctagtcgagaagaagaagtccatcgagagccg 123 Query: 181 caaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacaggacaagga 240 |||| |||||||| ||||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 124 caagctcatcttcacccgcgcaaagcagtacgccgaggaatacgatgcccaggagaagga 183 Query: 241 gttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggc 300 |||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 184 actggtgcagcttaagcgcgaggcccgtttgaagggtggtttctatgtcagtcctgaggc 243 Query: 301 taagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaa 360 ||| |||| ||||| ||||| ||| | ||||| || ||||||||||| ||||||| ||| Sbjct: 244 aaagctgctctttgtggtccgcatccggggtattaacgccatgcaccctaagaccaggaa 303 Query: 361 gatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaa 420 |||| | |||||| |||| ||||| ||||| |||||||| ||||||||||| || ||||| Sbjct: 304 gatcttgcagcttctgcgattgaggcagatcttcaatggtgtgttcctcaaagtcaacaa 363 Query: 421 ggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacct 480 ||| || || |||||||| |||||||| |||||||||||||||||||||||||| ||| | Sbjct: 364 ggcgactattaacatgctacgcagggttgagccatatgttgcatatgggtacccaaactt 423 Query: 481 gaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaaggat 540 ||||||||| |||||||||||||||||||| || ||||||||||| |||||||| ||||| Sbjct: 424 gaagagtgtcagggagttgatctacaagaggggctatggaaagctgaacaagcagaggat 483 Query: 541 tcctctg 547 |||||| Sbjct: 484 ccctctg 490
>gb|BT016468.1| Zea mays clone Contig301 mRNA sequence Length = 1198 Score = 432 bits (218), Expect = e-118 Identities = 426/494 (86%), Gaps = 1/494 (0%) Strand = Plus / Plus Query: 55 gtcgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcggga 114 |||||||||||| | |||||||| ||||||||||||||| |||| |||| ||||||| || Sbjct: 49 gtcgtccgaggccgtgaaggtggcggtgccggagtcggtactccgcaagcggaagcgcga 108 Query: 115 ggagctctgggccgccgagaagaa-gaccaaggccgtcgaggagaagaagaagtcgacgg 173 ||||| ||||||||||||||||| || ||| || | | |||| ||||||||| | | Sbjct: 109 ggagcagtgggccgccgagaagaacgatgaagtccctggccgagaggaagaagtccatcg 168 Query: 174 agaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacagg 233 ||| ||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 169 agagccggaagctcatcttcacccgcgccaagcagtacgccgaggagtacgatgcccagg 228 Query: 234 acaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagtc 293 | ||||| |||| |||||||||||||||||||| |||||||||| ||||||||||| | Sbjct: 229 agaaggaactggtacagcttaagcgtgaggcccgtttgaagggtggtttctatgtcagcc 288 Query: 294 ctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaaga 353 ||||||| ||| |||| ||||| ||||| ||| | |||||||||||||||||||| |||| Sbjct: 289 ctgaggcaaagctgctatttgtggtccgcatccgtggtatcaatgccatgcaccctaaga 348 Query: 354 ccaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaagg 413 ||| |||||| | |||||| |||||||||| ||||| ||||||||||||||||| || | Sbjct: 349 ccaggaagatattgcagcttctgcgtttgaggcagatcttcaatggagtgttcctgaaag 408 Query: 414 ttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtacc 473 | ||||| || ||||| |||||||| |||||||| || || ||||||||||||||||||| Sbjct: 409 tcaacaaagcaaccattaacatgcttcgcagggttgaaccttatgttgcatatgggtacc 468 Query: 474 cgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagc 533 ||||| |||||||||| |||||||||||||||||||| || || ||||| || ||||||| Sbjct: 469 cgaacttgaagagtgtcagggagttgatctacaagaggggctacggaaaactgaacaagc 528 Query: 534 aaaggattcctctg 547 | ||||| |||||| Sbjct: 529 agaggatccctctg 542
>ref|XM_480842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1084 Score = 426 bits (215), Expect = e-116 Identities = 407/471 (86%) Strand = Plus / Plus Query: 76 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 135 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 82 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 141 Query: 136 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 195 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 142 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 201 Query: 196 ccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggttcagcttaa 255 ||||||||||||||||||| |||||||||| || ||||| |||||| | || ||||| || Sbjct: 202 ccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgtgcagctcaa 261 Query: 256 gcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagttgctgtttgt 315 ||||||||| |||||||||||||||||||| ||||| |||||||| || | |||||||| Sbjct: 262 gcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaacttctgtttgt 321 Query: 316 tgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcctccagctttt 375 ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | |||||| | Sbjct: 322 ggtccgcatccgtggtatcaatgccatgcaccccaagaccaggaagatcttgcagcttct 381 Query: 376 gcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacat 435 ||| ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 382 gcggttgaggcagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacat 441 Query: 436 gctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgaggga 495 ||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 442 gctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaagagtgtcaggga 501 Query: 496 gttgatctacaagagaggttatggaaagctcaacaagcaaaggattcctct 546 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 502 attgatctacaagaggggttacggaaagctcaacaagcagaggattcctct 552
>dbj|AK102873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112B19, full insert sequence Length = 1084 Score = 418 bits (211), Expect = e-114 Identities = 406/471 (86%) Strand = Plus / Plus Query: 76 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 135 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 82 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 141 Query: 136 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 195 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 142 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 201 Query: 196 ccgcgccaagcagtacgccgaggagtacgatgcacaggacaaggagttggttcagcttaa 255 ||||||||||||||||||| |||||||||| || ||||| |||||| | || ||||| || Sbjct: 202 ccgcgccaagcagtacgcccaggagtacgacgcgcaggagaaggagcttgtgcagctcaa 261 Query: 256 gcgtgaggcccggatgaagggtgggttctatgtcagtcctgaggctaagttgctgtttgt 315 ||||||||| |||||||||||||||||||| ||||| |||||||| || | |||||||| Sbjct: 262 gcgtgaggctcggatgaagggtgggttctacgtcagccctgaggccaaacttctgtttgt 321 Query: 316 tgtccgaatcagaggtatcaatgccatgcacccaaagaccaagaagatcctccagctttt 375 ||||| ||| | |||||||||||||||||||| ||||||| ||||||| | |||||| | Sbjct: 322 ggtccgcatccgtggtatcaatgccatgcaccccaagaccaggaagatcttgcagcttct 381 Query: 376 gcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacat 435 ||| ||||| ||||| |||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 382 gcggttgaggcagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacat 441 Query: 436 gctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgaggga 495 ||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 442 gctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaaaagtgtcaggga 501 Query: 496 gttgatctacaagagaggttatggaaagctcaacaagcaaaggattcctct 546 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 502 attgatctacaagaggggttacggaaagctcaacaagcagaggattcctct 552
>gb|AY103677.1| Zea mays PCO099976 mRNA sequence Length = 1103 Score = 331 bits (167), Expect = 1e-87 Identities = 320/371 (86%) Strand = Plus / Plus Query: 173 gagaaccgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacgatgcacag 232 |||| ||||||| |||||||||||||||||||||||||||||||||||||| | || ||| Sbjct: 234 gagagccgcaagatcatcttcgcccgcgccaagcagtacgccgaggagtaccacgcccag 293 Query: 233 gacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtcagt 292 || |||||| | || ||||| ||||||||||||||| ||||||||||||||||||| || Sbjct: 294 gagaaggagcttgtgcagctcaagcgtgaggcccggttgaagggtgggttctatgtgagc 353 Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 || ||||| ||| | |||||||| || || ||| | |||||||||||||||||||| ||| Sbjct: 354 ccagaggccaagcttctgtttgtggttcgcatccgtggtatcaatgccatgcaccccaag 413 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||| |||||| | ||||| |||| ||||| ||||| ||||| || || ||||||||| Sbjct: 414 acccgcaagatcttgcagctcctgcgattgaggcagatcttcaacggtgtcttcctcaag 473 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 ||||||||||| ||||| |||||||| |||||||| |||||||||||||| || || ||| Sbjct: 474 gttaacaaggcaaccattaacatgctgcgcagggtggagccatatgttgcgtacggatac 533 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaag 532 || ||||||||||| || |||||||| ||||||||||||||||| || ||||| |||||| Sbjct: 534 cccaacctgaagagcgttagggagttaatctacaagagaggttacgggaagctgaacaag 593 Query: 533 caaaggattcc 543 || |||||||| Sbjct: 594 cagaggattcc 604
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 176 bits (89), Expect = 5e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 57 cgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcgggagg 116 ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 109853 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 109912 Query: 117 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 176 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 109913 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 109972 Query: 177 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacga 225 ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 109973 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacga 110021 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 230 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 289 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 110622 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 110681 Query: 290 agtcctgaggctaagttgctgtttgttgtccg 321 || ||||||| |||||||||||||| ||||| Sbjct: 110682 agccctgaggaaaagttgctgtttgtggtccg 110713 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 386 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 445 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 110964 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 111023 Query: 446 gtcgagccatatgttgcatatgggta 471 || ||||||||||||||||||||||| Sbjct: 111024 gttgagccatatgttgcatatgggta 111049 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 480 tgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagga 539 |||||||||| | || |||||||||||||| || ||||||||||||||||||||||| | Sbjct: 111405 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 111464 Query: 540 ttcctct 546 | ||||| Sbjct: 111465 tccctct 111471 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 384 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 110820 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 110874
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 176 bits (89), Expect = 5e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 57 cgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcgggagg 116 ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 37876 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 37935 Query: 117 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 176 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 37936 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 37995 Query: 177 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacga 225 ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 37996 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacga 38044 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 230 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 289 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 38645 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 38704 Query: 290 agtcctgaggctaagttgctgtttgttgtccg 321 || ||||||| |||||||||||||| ||||| Sbjct: 38705 agccctgaggaaaagttgctgtttgtggtccg 38736 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 386 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 445 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 38987 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 39046 Query: 446 gtcgagccatatgttgcatatgggta 471 || ||||||||||||||||||||||| Sbjct: 39047 gttgagccatatgttgcatatgggta 39072 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 480 tgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagga 539 |||||||||| | || |||||||||||||| || ||||||||||||||||||||||| | Sbjct: 39428 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 39487 Query: 540 ttcctct 546 | ||||| Sbjct: 39488 tccctct 39494 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 384 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 38843 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 38897
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 176 bits (89), Expect = 5e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 57 cgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcgggagg 116 ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 30634145 cgtccgaggcggccaaggtggtggtgccggagtccgtgctccgcaagaggaagcgggagg 30634204 Query: 117 agctctgggccgccgagaagaagaccaaggccgtcgaggagaagaagaagtcgacggaga 176 || | ||||| |||| || ||| |||||||||| |||||||||||||| | |||| Sbjct: 30634205 aggtgtgggcggccgcgagcaaggagaaggccgtcgccgagaagaagaagtccatcgaga 30634264 Query: 177 accgcaaggtcatcttcgcccgcgccaagcagtacgccgaggagtacga 225 ||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 30634265 gccgcaagctcatcttctcccgcgccaagcagtacgccgaggagtacga 30634313 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 230 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 289 ||||| |||||| |||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct: 30634914 caggagaaggagctggtgcaacttaagcgtgaggctcggatgaagggtggtttctatgtc 30634973 Query: 290 agtcctgaggctaagttgctgtttgttgtccg 321 || ||||||| |||||||||||||| ||||| Sbjct: 30634974 agccctgaggaaaagttgctgtttgtggtccg 30635005 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 386 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagg 445 ||||| || |||||||||||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct: 30635256 cagatctttaatggagtgttcttgaaggtcaacaaagccaccattaacatgctgcgcagg 30635315 Query: 446 gtcgagccatatgttgcatatgggta 471 || ||||||||||||||||||||||| Sbjct: 30635316 gttgagccatatgttgcatatgggta 30635341 Score = 69.9 bits (35), Expect = 8e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 480 tgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagcaaagga 539 |||||||||| | || |||||||||||||| || ||||||||||||||||||||||| | Sbjct: 30635697 tgaagagtgtccgtgaattgatctacaagaggggctatggaaagctcaacaagcaaagaa 30635756 Query: 540 ttcctct 546 | ||||| Sbjct: 30635757 tccctct 30635763 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 384 ||||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| Sbjct: 30635112 gtatcaatgccatgcacccgaagaccaggaagattttgcagctcttgcgtttgag 30635166
>dbj|AK061680.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A02, full insert sequence Length = 594 Score = 161 bits (81), Expect = 3e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 434 atgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagtgtgagg 493 ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1 atgctgcgcagggttgagccatatgttgcatatgggtacccaaacctgaagagtgtcagg 60 Query: 494 gagttgatctacaagagaggttatggaaagctcaacaagcaaaggattcctct 546 || |||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 61 gaattgatctacaagaggggttacggaaagctcaacaagcagaggattcctct 113
>ref|NM_126186.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G01250 mRNA, complete cds Length = 1051 Score = 137 bits (69), Expect = 4e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 347 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 406 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 407 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 466 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 467 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 526 Query: 509 agaggttatggaaagct 525 |||||||| |||||||| Sbjct: 527 agaggttacggaaagct 543
>gb|AY081698.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 751 Score = 137 bits (69), Expect = 4e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 271 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 330 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 331 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 390 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 391 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 450 Query: 509 agaggttatggaaagct 525 |||||||| |||||||| Sbjct: 451 agaggttacggaaagct 467
>gb|AF370484.1|AF370484 Arabidopsis thaliana 60S ribosomal protein L7 (At2g01250; F10A8.13) mRNA, complete cds Length = 915 Score = 137 bits (69), Expect = 4e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 318 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 377 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 378 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 437 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 438 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 497 Query: 509 agaggttatggaaagct 525 |||||||| |||||||| Sbjct: 498 agaggttacggaaagct 514
>gb|AY085139.1| Arabidopsis thaliana clone 13298 mRNA, complete sequence Length = 996 Score = 137 bits (69), Expect = 4e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 347 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 406 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 407 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 466 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 467 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 526 Query: 509 agaggttatggaaagct 525 |||||||| |||||||| Sbjct: 527 agaggttacggaaagct 543
>gb|AY079328.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 760 Score = 129 bits (65), Expect = 1e-26 Identities = 164/197 (83%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 271 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgaggcag 330 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 331 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 390 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 391 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 450 Query: 509 agaggttatggaaagct 525 |||||||| |||||||| Sbjct: 451 agaggttacggaaagct 467
>gb|AY045994.1| Arabidopsis thaliana putative ribosomal protein L7 (At2g01250) mRNA, complete cds Length = 960 Score = 129 bits (65), Expect = 1e-26 Identities = 164/197 (83%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 320 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgaggcag 379 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 380 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 439 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| |||||||||| | ||| |||||||||||| Sbjct: 440 gagccctatgtcacttacggattccctaacttgaagagtgtcaaggaattgatctacaag 499 Query: 509 agaggttatggaaagct 525 |||||||| |||||||| Sbjct: 500 agaggttacggaaagct 516
>ref|NM_202576.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.3 mRNA, complete cds Length = 1569 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 915 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 974 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 975 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 1034 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 1035 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 1094 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 1095 cgaggttttggaaagct 1111
>ref|NM_202575.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.2 mRNA, complete cds Length = 1225 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 571 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 630 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 631 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 690 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 691 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 750 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 751 cgaggttttggaaagct 767
>ref|NM_112204.2| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT3G13580 transcript variant AT3G13580.1 mRNA, complete cds Length = 995 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>ref|NM_180079.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.1 mRNA, complete cds Length = 981 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 314 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 373 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 374 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 433 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 434 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 493 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 494 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 546
>ref|NM_180080.1| Arabidopsis thaliana structural constituent of ribosome / transcription regulator AT2G44120 transcript variant AT2G44120.2 mRNA, complete cds Length = 1220 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 541 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 600 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 601 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 660 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 661 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 720 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 721 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 773
>gb|AY081474.1| Arabidopsis thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 782 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 235 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 294 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 295 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 354 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 355 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 414 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 415 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 467
>gb|AY077675.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 735 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 277 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 336 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 337 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 396 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 397 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 456 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 457 cgaggttttggaaagct 473
>gb|AY065196.1| Arabidopsis thaliana 60S ribosomal protein L7 (F6E13.25; At2g44120) mRNA, complete cds Length = 888 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 277 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 336 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 337 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 396 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 397 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 456 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 457 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 509
>gb|AF446884.1|AF446884 Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 729 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 235 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 294 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 295 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 354 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 355 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 414 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 415 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 467
>gb|AY056112.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 971 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>gb|AY052724.1| Arabidopsis thaliana At2g44120/F6E13.25 mRNA, complete cds Length = 905 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 277 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 336 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 337 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 396 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 397 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 456 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 457 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 509
>gb|AY039900.1| Arabidopsis thaliana AT3g13580/K20M4_2 mRNA, complete cds Length = 966 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 341 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 400 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 401 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 460 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 461 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 520 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 521 cgaggttttggaaagct 537
>emb|BX822214.1|CNS0A5Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 943 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 323 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 382 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 383 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 442 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 443 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 502 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 503 cgaggttttggaaagct 519
>emb|BX824301.1|CNS0A5PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZB04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1136 Score = 121 bits (61), Expect = 3e-24 Identities = 163/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 567 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 626 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||||| ||| | || Sbjct: 627 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgcttcgccgtgtt 686 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 687 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 746 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 747 cgaggttttggaaagct 763
>gb|AY087583.1| Arabidopsis thaliana clone 36813 mRNA, complete sequence Length = 1221 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 541 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 600 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 601 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 660 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 661 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 720 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 721 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 773
>gb|BT002379.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 955 Score = 121 bits (61), Expect = 3e-24 Identities = 190/233 (81%) Strand = Plus / Plus Query: 293 cctgaggctaagttgctgtttgttgtccgaatcagaggtatcaatgccatgcacccaaag 352 ||||||||||||||||| ||| | | || ||| | |||||||||||||| ||||||| Sbjct: 310 cctgaggctaagttgctctttatcattcgtatccgtggtatcaatgccattgacccaaaa 369 Query: 353 accaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctcaag 412 ||||||||||| || ||||| |||||||||||||||| |||||||| ||||| || ||| Sbjct: 370 accaagaagattctgcagctcctgcgtttgagacagatcttcaatggtgtgtttcttaag 429 Query: 413 gttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggtac 472 || |||||||| || | |||||||| ||| | || || ||||| || | || || ||| Sbjct: 430 gtgaacaaggcaacagtaaacatgctgcgccgagttgaaccatacgtgacttacggatac 489 Query: 473 ccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 || ||| ||||||| || | ||| |||||||||| ||||||||||||||||| Sbjct: 490 ccaaacttgaagagcgttaaggaactgatctacaaaagaggttatggaaagct 542
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 385 acagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcag 444 |||||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 8148188 acagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacatgctgcgcag 8148247 Query: 445 ggtcgagccatatgttgcatatgggta 471 ||| ||||||||||||||||||||||| Sbjct: 8148248 ggttgagccatatgttgcatatgggta 8148274 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 468 ggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctca 527 ||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||| Sbjct: 8148769 ggtacccaaacctgaagagtgtcagggaattgatctacaagaggggttacggaaagctca 8148828 Query: 528 acaagcaaaggattcctct 546 ||||||| ||||||||||| Sbjct: 8148829 acaagcagaggattcctct 8148847 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 76 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 135 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 8147203 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 8147262 Query: 136 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 195 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 8147263 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 8147322 Query: 196 ccgcgccaagcagtacgccgaggagtacga 225 ||||||||||||||||||| |||||||||| Sbjct: 8147323 ccgcgccaagcagtacgcccaggagtacga 8147352 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 230 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 289 ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 8147868 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 8147927 Query: 290 agtcctgaggctaagttgctgtttgttgtccg 321 || |||||||| || | |||||||| ||||| Sbjct: 8147928 agccctgaggccaaacttctgtttgtggtccg 8147959 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 384 ||||||||||||||||||| ||||||| ||||||| | |||||| |||| ||||| Sbjct: 8148044 gtatcaatgccatgcaccccaagaccaggaagatcttgcagcttctgcggttgag 8148098
>dbj|AP005603.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1047A05 Length = 157517 Score = 117 bits (59), Expect = 4e-23 Identities = 80/87 (91%) Strand = Plus / Plus Query: 385 acagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcag 444 |||||| |||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 116499 acagatcttcaatggtgtcttcctcaaggttaacaaggcaaccattaacatgctgcgcag 116558 Query: 445 ggtcgagccatatgttgcatatgggta 471 ||| ||||||||||||||||||||||| Sbjct: 116559 ggttgagccatatgttgcatatgggta 116585 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 468 ggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctca 527 ||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||| Sbjct: 117080 ggtacccaaacctgaagagtgtcagggaattgatctacaagaggggttacggaaagctca 117139 Query: 528 acaagcaaaggattcctct 546 ||||||| ||||||||||| Sbjct: 117140 acaagcagaggattcctct 117158 Score = 91.7 bits (46), Expect = 2e-15 Identities = 124/150 (82%) Strand = Plus / Plus Query: 76 ggtggtgccggagtcggtgctcctcaagaggaagcgggaggagctctgggccgccgagaa 135 ||||||||||||||||||||| ||| ||||||||||||||| ||||| || || | Sbjct: 115514 ggtggtgccggagtcggtgctgaagaagcggaagcgggaggagcagtgggcggcggacag 115573 Query: 136 gaagaccaaggccgtcgaggagaagaagaagtcgacggagaaccgcaaggtcatcttcgc 195 |||| ||||| ||| |||||||||||| | |||| ||||||| |||||||||| Sbjct: 115574 gaaggagaaggcgctcgccgagaagaagaaggccgtcgagagccgcaagctcatcttcgc 115633 Query: 196 ccgcgccaagcagtacgccgaggagtacga 225 ||||||||||||||||||| |||||||||| Sbjct: 115634 ccgcgccaagcagtacgcccaggagtacga 115663 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 230 caggacaaggagttggttcagcttaagcgtgaggcccggatgaagggtgggttctatgtc 289 ||||| |||||| | || ||||| ||||||||||| |||||||||||||||||||| ||| Sbjct: 116179 caggagaaggagcttgtgcagctcaagcgtgaggctcggatgaagggtgggttctacgtc 116238 Query: 290 agtcctgaggctaagttgctgtttgttgtccg 321 || |||||||| || | |||||||| ||||| Sbjct: 116239 agccctgaggccaaacttctgtttgtggtccg 116270 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgag 384 ||||||||||||||||||| ||||||| ||||||| | |||||| |||| ||||| Sbjct: 116355 gtatcaatgccatgcaccccaagaccaggaagatcttgcagcttctgcggttgag 116409
>emb|BX818796.1|CNS0A9X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 889 Score = 113 bits (57), Expect = 6e-22 Identities = 162/197 (82%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 306 ggtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 365 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| || ||||| || || |||||||| || || |||||||| ||| | || Sbjct: 366 attttcaatggtgttttccttaaagtcaacaaggctacgatgaacatgcttcgccgtgtt 425 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| ||||| | || || | ||| ||| | |||||| | | ||| |||||||||||| Sbjct: 426 gagccctatgtcacttacggattccctaacttaaagagtatcaaggaattgatctacaag 485 Query: 509 agaggttatggaaagct 525 |||||||| | |||||| Sbjct: 486 agaggttacgtaaagct 502
>emb|BX824872.1|CNS0A5RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1504 Score = 97.6 bits (49), Expect = 4e-17 Identities = 161/197 (81%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 ||||| |||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 916 ggtataaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 975 Query: 389 atattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgctccgcagggtc 448 || |||||||| |||||| | ||||| |||||||| ||||| |||||| | ||| | || Sbjct: 976 attttcaatggtgtgttcttgaaggtcaacaaggcaaccattaacatg-ttcgccgtgtt 1034 Query: 449 gagccatatgttgcatatgggtacccgaacctgaagagtgtgagggagttgatctacaag 508 || || ||||| | ||||| ||||||||| | || ||||||| ||| ||||| ||||| Sbjct: 1035 gaaccctatgtaacctatggatacccgaacttaaaaagtgtgaaggaattgatttacaaa 1094 Query: 509 agaggttatggaaagct 525 |||||| ||||||||| Sbjct: 1095 cgaggttttggaaagct 1111
>emb|BX825759.1|CNS0A4ZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 93.7 bits (47), Expect = 6e-16 Identities = 96/111 (86%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||||||| |||||||||| |||||||| | || |||||||||||||||||| Sbjct: 311 ggtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttgagacag 370 Query: 389 atattc-aatggagtgttcctcaaggttaacaaggccaccatcaacatgct 438 || ||| ||||| |||||| | ||||| |||||||| ||||| |||||||| Sbjct: 371 attttcaaatggtgtgttcttgaaggtcaacaaggcaaccattaacatgct 421
>gb|AY105378.1| Zea mays PCO101520 mRNA sequence Length = 500 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 55 gtcgtccgaggcggcgaaggtggtggtgccggagtcggtgctcctcaagaggaagcggga 114 ||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||| || Sbjct: 67 gtcgtccgaggcgtcgaaggtgtcggtgccggagtcggtgctccgcaagcggaagcgtga 126 Query: 115 gga 117 ||| Sbjct: 127 gga 129
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 69.9 bits (35), Expect = 8e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 ||||||||||||| |||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 43427 gtatcaatgccattgaccctaagactaagaagattctccagctcttgcgtttgagacag 43369 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 480 tgaagagtgtgagggagttgatctacaagagaggttatggaaagct 525 |||||||||| | ||| |||||||||||||||||||| |||||||| Sbjct: 42945 tgaagagtgtcaaggaattgatctacaagagaggttacggaaagct 42900
>gb|DQ228335.1| Solanum tuberosum clone 145F05 thaliana 60S ribosomal protein L7 (At2g44120) mRNA, complete cds Length = 915 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Plus Query: 351 agaccaagaagatcctccagcttttgcgtttgagacagatattcaatggagtgttcctca 410 ||||||| ||||| || |||||| | | ||| ||||||| ||||| || || ||| | | Sbjct: 339 agaccaaaaagattctgcagcttctcagattgcgacagatcttcaacggcgtcttcttga 398 Query: 411 aggttaacaaggccaccatcaacatgctccgcagggtcgagccatatgttgcatatgggt 470 | ||||||||||||||| | |||||||| | ||||| |||||||||||| |||| || | Sbjct: 399 aagttaacaaggccaccgtgaacatgctgcatagggttgagccatatgttacatacggct 458 Query: 471 acccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaag 523 | || ||| |||||||| | | || |||||||||| |||||||||||||| Sbjct: 459 atcccaacttgaagagtattaaagaactgatctacaaacgaggttatggaaag 511
>gb|DQ108546.1| Corchorus olitorius SSR marker J148-M13F genomic sequence Length = 861 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 479 ctgaagagtgtgagggagttgatctacaagagaggttatggaaagctcaacaagca 534 |||||||||||||| ||| |||||||||||||||| ||||| ||| | |||||||| Sbjct: 463 ctgaagagtgtgagagagctgatctacaagagaggatatgggaagttaaacaagca 408
>gb|AC004005.3| Arabidopsis thaliana chromosome 2 clone F6E13 map CIC10F02, CIC02E07, complete sequence Length = 109741 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 ||||||||||||| ||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 80212 gtatcaatgccattgacccaaaaaccaagaagattctgcagctcctgcgtttgagacag 80154 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 498 tgatctacaagagaggttatggaaagct 525 |||||||||| ||||||||||||||||| Sbjct: 79783 tgatctacaaaagaggttatggaaagct 79756
>ref|XM_453218.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D03410g predicted mRNA Length = 768 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaaggattcct 544 |||||||||||||||| || ||| ||||||||||||| |||||| Sbjct: 476 tctacaagagaggttacggtaagatcaacaagcaaagaattcct 519
>gb|AY232023.1| Drosophila yakuba clone yak-ad_RpL7 mRNA sequence Length = 560 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 368 cagcttttgcgtttgagacagatattcaatggagtgttcctcaaggttaacaaggccacc 427 |||||||| ||| |||| ||||| ||| || |||||| ||||| | |||||||||||| Sbjct: 337 cagcttttccgtctgaggcagatcaacaacggtgtgttcatcaagctgaacaaggccacc 396 Query: 428 atcaacatgctccgca 443 ||||||||||| |||| Sbjct: 397 atcaacatgcttcgca 412
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaaggattcct 544 |||||||||||||||| || ||| ||||||||||||| |||||| Sbjct: 286053 tctacaagagaggttacggtaagatcaacaagcaaagaattcct 286096
>ref|NM_078807.1| Drosophila melanogaster Ribosomal protein L7 CG4897-RA (RpL7), mRNA Length = 982 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 401 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 443 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 418 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 460
>gb|AY089648.1| Drosophila melanogaster RH04903 full insert cDNA Length = 909 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 401 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 443 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 417 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 459
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 401 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 443 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 20419 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 20377
>gb|AC009849.7|AC009849 Drosophila melanogaster, chromosome 2L, region 31B-31C, BAC clone BACR07H08, complete sequence Length = 153505 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 401 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 443 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 29566 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 29608
>dbj|AP002038.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone: K20M4 Length = 25790 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 ||||||||||||| |||||||||| |||||||| | || ||||||||||| |||||| Sbjct: 4913 gtatcaatgccattgacccaaagacaaagaagattttgcaacttttgcgtttaagacag 4971
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 401 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 443 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 227949 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 227991
>emb|X15109.1|DMRPHOM D.melanogaster mRNA fragment for ribosomal protein homologous to rat ribosomal protein L7 Length = 810 Score = 54.0 bits (27), Expect = 5e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 401 gtgttcctcaaggttaacaaggccaccatcaacatgctccgca 443 |||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 332 gtgttcatcaagctgaacaaggccaccatcaacatgctgcgca 374
>gb|DQ216877.1| Taeniopygia guttata clone 0061P0010G03 ribosomal protein L7-like mRNA, complete sequence Length = 765 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 498 tgatctacaagagaggttatggaaagctcaacaagca 534 ||||||||||| |||||||||| ||| |||||||||| Sbjct: 394 tgatctacaagcgaggttatggcaagatcaacaagca 430
>gb|DQ216876.1| Taeniopygia guttata clone 0061P0026G05 ribosomal protein L7-like mRNA, complete sequence Length = 764 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 498 tgatctacaagagaggttatggaaagctcaacaagca 534 ||||||||||| |||||||||| ||| |||||||||| Sbjct: 393 tgatctacaagcgaggttatggcaagatcaacaagca 429
>gb|AC148819.3| Medicago truncatula chromosome 2 BAC clone mte1-11g7, complete sequence Length = 105682 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 479 ctgaagagtgtgagggagttgatctacaagagaggttatggaaag 523 ||||||||||| || || |||||||||||| | |||||||||||| Sbjct: 3017 ctgaagagtgtcagagaattgatctacaagcgcggttatggaaag 3061 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 330 gtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 |||||||||| ||| ||||||| | | |||||| | ||||||||||||||||||||| Sbjct: 1888 gtatcaatgcaatggacccaaaatcaaggaagattttgcagcttttgcgtttgagacag 1946
>emb|AJ557884.1|CGI557884 Crassostrea gigas partial mRNA for ribosomal protein L7 (rpl7 gene) Length = 782 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 467 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaa 522 |||||||| ||||| |||||||||||||| ||| | ||||| || || |||||||| Sbjct: 400 gggtaccccaacctcaagagtgtgagggaattggtgtacaaaaggggatatggaaa 455
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 124 ggccgccgagaagaagaccaaggccgt 150 |||||||||||||||| |||||||||| Sbjct: 63289 ggccgccgagaagaagcccaaggccgt 63315
>gb|AY072288.1| Spodoptera frugiperda ribosomal protein L7 mRNA, complete cds Length = 876 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 470 tacccgaacctgaagagtgtgagggagttgatctacaag 508 ||||| |||||||||||||| ||||||||| | |||||| Sbjct: 508 taccccaacctgaagagtgttagggagttggtatacaag 546
>gb|BC085590.1| Danio rerio cDNA clone IMAGE:7264251, partial cds Length = 877 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 aacaaggccaccatcaacatgctccg 441 ||||||||| |||||||||||||||| Sbjct: 389 aacaaggcctccatcaacatgctccg 414
>gb|AY561515.1| Danio rerio ribosomal protein L7 (rpl7) mRNA, complete cds Length = 829 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 aacaaggccaccatcaacatgctccg 441 ||||||||| |||||||||||||||| Sbjct: 391 aacaaggcctccatcaacatgctccg 416
>ref|NM_213644.1| Danio rerio ribosomal protein L7 (rpl7), mRNA Length = 829 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 aacaaggccaccatcaacatgctccg 441 ||||||||| |||||||||||||||| Sbjct: 391 aacaaggcctccatcaacatgctccg 416
>ref|XM_549203.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7 (LOC492082), mRNA Length = 564 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 467 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 526 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 244 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 303 Query: 527 aacaag 532 |||||| Sbjct: 304 aacaag 309
>ref|XM_854868.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7, transcript variant 2 (LOC477912), mRNA Length = 1120 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 467 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 526 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 417 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 476 Query: 527 aacaag 532 |||||| Sbjct: 477 aacaag 482
>ref|XM_535102.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7, transcript variant 1 (LOC477912), mRNA Length = 1178 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 467 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 526 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 475 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 534 Query: 527 aacaag 532 |||||| Sbjct: 535 aacaag 540
>ref|XM_537929.2| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7 (LOC480813), mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.48 Identities = 55/66 (83%) Strand = Plus / Plus Query: 467 gggtacccgaacctgaagagtgtgagggagttgatctacaagagaggttatggaaagctc 526 |||||||| ||||||||| |||| || |||||||||||| | |||||||| ||| || Sbjct: 439 gggtacccaaacctgaagtcagtgaatgaattgatctacaagcgtggttatggcaagatc 498 Query: 527 aacaag 532 |||||| Sbjct: 499 aacaag 504
>emb|AL445186.4| Human DNA sequence from clone RP11-336P12 on chromosome 9 Contains the 3' end of the PBX3 gene for pre-B-cell leukemia transcription factor 3, complete sequence Length = 156124 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 101 aagaggaagcgggaggagctctgggc 126 ||||||||||||||| |||||||||| Sbjct: 98427 aagaggaagcgggagaagctctgggc 98402
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 ggtggtggtgccggagtcggtg 94 |||||||||||||||||||||| Sbjct: 2061892 ggtggtggtgccggagtcggtg 2061871
>gb|BC107515.1| Danio rerio ribosomal protein L7, mRNA (cDNA clone MGC:123071 IMAGE:7399953), complete cds Length = 920 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 416 aacaaggccaccatcaacatgctccg 441 ||||||||| |||||||||||||||| Sbjct: 401 aacaaggcctccatcaacatgctccg 426
>ref|XM_529118.1| PREDICTED: Pan troglodytes similar to bA161I19.3 (similar to ribosomal protein L36) (LOC473745), mRNA Length = 318 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>ref|XM_512301.1| PREDICTED: Pan troglodytes similar to ribosomal protein L36; 60S ribosomal protein L36 (LOC455622), mRNA Length = 582 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 265 caagaggaagcgggaggagct 285
>ref|XM_510736.1| PREDICTED: Pan troglodytes mitogen-activated protein kinase 8 interacting protein 3 (LOC453825), mRNA Length = 8169 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagtcgac 171 ||||| ||||||||||||||||||| Sbjct: 5612 ccgtccaggagaagaagaagtcgac 5636
>ref|XM_522897.1| PREDICTED: Pan troglodytes similar to ribosomal protein L36; 60S ribosomal protein L36 (LOC467500), mRNA Length = 318 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>gb|DQ216875.1| Taeniopygia guttata clone 0058P0003F03 ribosomal protein L7-like mRNA, complete sequence Length = 842 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 498 tgatctacaagagaggttatggaaagctcaacaagca 534 ||||||||||| ||||||| || ||| |||||||||| Sbjct: 478 tgatctacaagcgaggttacggcaagatcaacaagca 514
>gb|DQ216874.1| Taeniopygia guttata clone 0065P0005A03 ribosomal protein L7-like mRNA, complete sequence Length = 844 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 498 tgatctacaagagaggttatggaaagctcaacaagca 534 ||||||||||| ||||||| || ||| |||||||||| Sbjct: 477 tgatctacaagcgaggttacggcaagatcaacaagca 513
>gb|AY617897.1| Sterkiella histriomuscorum clone UGC1O0006_E04_F genomic sequence Length = 674 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 416 aacaaggccaccatcaacatgctccgcagggtcgagccata 456 |||||||| ||||||||||||||| | || || |||||||| Sbjct: 539 aacaaggcaaccatcaacatgctcagaagagttgagccata 499
>gb|AY693324.1| Saccharomyces cerevisiae clone FLH114729.01X YPL197C gene, complete cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 347 tctacaagagaggtttcggtaagatcaacaagcaaag 311
>gb|AY389939.1| Latimeria chalumnae ribosomal protein L7 mRNA, partial cds Length = 664 Score = 42.1 bits (21), Expect = 1.9 Identities = 66/81 (81%) Strand = Plus / Plus Query: 428 atcaacatgctccgcagggtcgagccatatgttgcatatgggtacccgaacctgaagagt 487 |||||||||||||| | | ||| |||||| |||||| |||||||| || |||||| | Sbjct: 341 atcaacatgctccgaattgccgaaccatatattgcatgggggtacccaaatctgaagtct 400 Query: 488 gtgagggagttgatctacaag 508 || | ||||||||||||||| Sbjct: 401 gtacgtgagttgatctacaag 421
>ref|NM_001040439.1| Homo sapiens mitogen-activated protein kinase 8 interacting protein 3 (MAPK8IP3), transcript variant 2, mRNA Length = 5635 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagtcgac 171 ||||| ||||||||||||||||||| Sbjct: 1790 ccgtccaggagaagaagaagtcgac 1814
>ref|NM_015133.3| Homo sapiens mitogen-activated protein kinase 8 interacting protein 3 (MAPK8IP3), transcript variant 1, mRNA Length = 5653 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagtcgac 171 ||||| ||||||||||||||||||| Sbjct: 1808 ccgtccaggagaagaagaagtcgac 1832
>gb|BC004971.1| Homo sapiens ribosomal protein L36, transcript variant 1, mRNA (cDNA clone MGC:3585 IMAGE:2957859), complete cds Length = 408 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 273 caagaggaagcgggaggagct 293
>gb|BC003052.1| Homo sapiens ribosomal protein L36, transcript variant 2, mRNA (cDNA clone MGC:781 IMAGE:3546966), complete cds Length = 578 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 401 caagaggaagcgggaggagct 421
>ref|NM_033643.2| Homo sapiens ribosomal protein L36 (RPL36), transcript variant 1, mRNA Length = 453 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 318 caagaggaagcgggaggagct 338
>ref|NM_015414.3| Homo sapiens ribosomal protein L36 (RPL36), transcript variant 2, mRNA Length = 557 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 422 caagaggaagcgggaggagct 442
>ref|XM_596585.2| PREDICTED: Bos taurus similar to aldehyde oxidase structural homolog 2 (LOC518393), mRNA Length = 5298 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 acccaaagaccaagaagatcc 365 ||||||||||||||||||||| Sbjct: 311 acccaaagaccaagaagatcc 331
>gb|AY207497.1| Chlamydomonas reinhardtii CR057 protein gene, complete cds Length = 4765 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagt 167 ||||||||||||||||||||| Sbjct: 3157 ccgtcgaggagaagaagaagt 3177
>ref|XM_446758.1| Candida glabrata CBS138, CAGL0G09130g partial mRNA Length = 735 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 |||||||||||||| | || ||| ||||||||||||| Sbjct: 443 tctacaagagaggtcacggtaagatcaacaagcaaag 479
>gb|BC001476.1| Homo sapiens cDNA clone IMAGE:3138803, **** WARNING: chimeric clone **** Length = 1306 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 1143 caagaggaagcgggaggagct 1163
>emb|AL590609.15| Human DNA sequence from clone RP11-4M23 on chromosome 1 Contains the 5' end of the FUCA1 gene for alpha-L- 1 fucosidase (tissue), the CNR2 gene for cannabinoid receptor 2 (macrophage), a BTB (POZ) domain-containing 6 (BTBD6) pseudogene, a novel gene, an H3 histone family 3A (H3F3A) pseudogene, the PNRC2 gene for proline-rich nuclear receptor coactivator 2, the FUS1P1 gene for FUS interacting protein (serine-arginine rich) 1, a ribosomal protein L36 (RPL36) pseudogene and seven CpG islands, complete sequence Length = 172307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 140972 caagaggaagcgggaggagct 140952
>emb|AL589786.8| Human DNA sequence from clone RP11-161I19 on chromosome X Contains a RNA binding motif protein X chromosome (RBMX) pseudogene, a ribosomal protein L36 pseudogene, the 5' end of a novel gene (KIAA1495), a novel gene (FLJ40249) and two CpG islands, complete sequence Length = 106099 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 48855 caagaggaagcgggaggagct 48875
>emb|AL031717.11|HS361A3 Human DNA sequence from clone LA16c-361A3 on chromosome 16 Contains part of gene simliar to murine JNK/SAPK-associated protein-1, STSs, GSSs and CpG islands, complete sequence Length = 43288 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagtcgac 171 ||||| ||||||||||||||||||| Sbjct: 40192 ccgtccaggagaagaagaagtcgac 40216
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 |||||||||||||| | || ||| ||||||||||||| Sbjct: 872856 tctacaagagaggtcacggtaagatcaacaagcaaag 872892
>emb|AL050273.1|HSM800130 Homo sapiens mRNA; cDNA DKFZp566B023 (from clone DKFZp566B023) Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 284 caagaggaagcgggaggagct 304
>emb|CR858862.1| Pongo pygmaeus mRNA; cDNA DKFZp469C084 (from clone DKFZp469C084) Length = 546 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 300 caagaggaagcgggaggagct 320
>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8 Length = 270150 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagtcgac 171 ||||| ||||||||||||||||||| Sbjct: 154082 ccgtccaggagaagaagaagtcgac 154106
>gb|DQ122884.1| Chlamydomonas incerta mitochondrial carrier protein CR057 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1745 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagt 167 ||||||||||||||||||||| Sbjct: 1136 ccgtcgaggagaagaagaagt 1156
>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence Length = 199776 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 64929 caagaggaagcgggaggagct 64949
>emb|CR616362.1| full-length cDNA clone CS0DI037YN14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 422 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 307 caagaggaagcgggaggagct 327
>emb|CR613397.1| full-length cDNA clone CS0DI014YA14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 370 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 255 caagaggaagcgggaggagct 275
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 ccgtcgaggagaagaagaagt 167 ||||||||||||||||||||| Sbjct: 64268 ccgtcgaggagaagaagaagt 64248
>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194991 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 tggagtgttcctcaaggttaa 417 ||||||||||||||||||||| Sbjct: 59461 tggagtgttcctcaaggttaa 59441
>gb|AE012262.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 170 of 460 of the complete genome Length = 10804 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 138 agaccaaggccgtcgaggagaagaagaag 166 ||||||||||||| | ||||||||||||| Sbjct: 653 agaccaaggccgttggggagaagaagaag 681
>ref|XM_372840.3| PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC391209), mRNA Length = 525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 456 caagaggaagcgggaggagct 476
>ref|XM_926127.1| PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC642675), mRNA Length = 621 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 552 caagaggaagcgggaggagct 572
>ref|XM_060417.2| PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC127295), mRNA Length = 333 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 264 caagaggaagcgggaggagct 284
>emb|CR533465.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0417D for gene RPL36, ribosomal protein L36; complete cds, incl. stopcodon Length = 330 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 138 agaccaaggccgtcgaggagaagaagaag 166 ||||||||||||| | ||||||||||||| Sbjct: 3167179 agaccaaggccgttggggagaagaagaag 3167151
>ref|NG_002555.1| Homo sapiens ribosomal protein L36a pseudogene 3 (RPL36AP3) on chromosome 14 Length = 570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 356 caagaggaagcgggaggagct 376
>gb|AF401559.1| Ictalurus punctatus ribosomal protein L7 mRNA, partial cds Length = 840 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 386 cagatattcaatggagtgttcctcaaggttaacaaggccaccatcaacatgct 438 ||||| ||||| || || ||| ||||| | ||||||||| ||||||||||||| Sbjct: 389 cagatcttcaacggcgtcttcgtcaagctcaacaaggcctccatcaacatgct 441
>gb|AC022215.4|AC022215 Homo sapiens BAC clone RP11-764I5 from 3, complete sequence Length = 180068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 tggagtgttcctcaaggttaa 417 ||||||||||||||||||||| Sbjct: 69254 tggagtgttcctcaaggttaa 69274
>gb|AC007160.3|AC007160 Homo sapiens PAC clone RP1-146I3 from 14q24.3, complete sequence Length = 87600 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 12895 caagaggaagcgggaggagct 12915
>gb|AF077043.1| Homo sapiens 60S ribosomal protein L36 mRNA, complete cds Length = 538 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 394 caagaggaagcgggaggagct 414
>gb|AY892066.1| Synthetic construct Homo sapiens clone FLH027370.01L ribosomal protein L36 (RPL36) mRNA, partial cds Length = 318 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>gb|AY889618.1| Synthetic construct Homo sapiens clone FLH027374.01X ribosomal protein L36 (RPL36) mRNA, complete cds Length = 318 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 249 caagaggaagcgggaggagct 269
>dbj|AB111398.1| Amia calva G6PD mRNA for glucose-6-phosphate 1-dehydrogenase, partial cds Length = 1639 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 64 ggcggcgaaggtggtggtgccggagtcgg 92 |||||||||||||| ||||| |||||||| Sbjct: 889 ggcggcgaaggtgggggtgctggagtcgg 861
>gb|BC091508.1| Homo sapiens ribosomal protein L36, transcript variant 1, mRNA (cDNA clone MGC:111171 IMAGE:30417606), complete cds Length = 439 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 301 caagaggaagcgggaggagct 321
>emb|X62627.1|SCYL8A S.cerevisiae YL8A gene for ribosomal protein YL8 Length = 2120 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1544 tctacaagagaggtttcggtaagatcaacaagcaaag 1580
>emb|Z73554.1|SCYPL198W S.cerevisiae chromosome XVI reading frame ORF YPL198w Length = 2287 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1655 tctacaagagaggtttcggtaagatcaacaagcaaag 1691
>emb|Z72598.1|SCYGL076C S.cerevisiae chromosome VII reading frame ORF YGL076c Length = 3008 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 711 tctacaagagaggtttcggtaagatcaacaagcaaag 675
>gb|DQ332874.1| Synthetic construct Saccharomyces cerevisiae clone FLH002665.01X RPL7A gene, complete sequence Length = 1662 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1370 tctacaagagaggtttcggtaagatcaacaagcaaag 1406
>emb|BX511012.5| Human DNA sequence from clone RP4-737A14 on chromosome 1, complete sequence Length = 106433 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 77637 caagaggaagcgggaggagct 77617
>dbj|AB028989.2| Homo sapiens mRNA for KIAA1066 protein, partial cds Length = 5621 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 ccgtcgaggagaagaagaagtcgac 171 ||||| ||||||||||||||||||| Sbjct: 1808 ccgtccaggagaagaagaagtcgac 1832
>dbj|D25232.1|YSCYL8B Yeast YL8B gene for ribosomal protein YL8, complete cds (exon1, exon2, exon3) Length = 1919 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 1503 tctacaagagaggtttcggtaagatcaacaagcaaag 1539
>dbj|AB061833.1| Homo sapiens RPL36 gene for ribosomal protein L36, complete cds and sequence Length = 2975 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 2300 caagaggaagcgggaggagct 2320
>dbj|AB046410.1| Homo sapiens RPL36 gene for ribosomal protein L36, partial cds Length = 174 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagct 120 ||||||||||||||||||||| Sbjct: 147 caagaggaagcgggaggagct 167
>emb|X69548.1|SCCTRHNM1 S.cerevisiae upstream region of CTR/HNM1 gene Length = 818 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 501 tctacaagagaggttatggaaagctcaacaagcaaag 537 ||||||||||||||| || ||| ||||||||||||| Sbjct: 106 tctacaagagaggtttcggtaagatcaacaagcaaag 142
>ref|NM_197497.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBa0034L04.1), mRNA Length = 914 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccgaggcggcgaaggtggtggtgccgga 87 |||||||||| |||| |||||||||||| Sbjct: 605 ccgaggcggccaagggggtggtgccgga 632
>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence Length = 208546 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 agacagatattcaatggagt 402 |||||||||||||||||||| Sbjct: 106413 agacagatattcaatggagt 106432
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ccaagaagatcctccagctt 373 |||||||||||||||||||| Sbjct: 1727713 ccaagaagatcctccagctt 1727732
>gb|AF402800.1| Oryza sativa (japonica cultivar-group) clone RICS12005A putative glutathione S-transferase OsGSTU13 mRNA, complete cds Length = 998 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccgaggcggcgaaggtggtggtgccgga 87 |||||||||| |||| |||||||||||| Sbjct: 670 ccgaggcggccaagggggtggtgccgga 697
>ref|NM_030238.1| Mus musculus dynein cytoplasmic 1 heavy chain 1 (Dync1h1), mRNA Length = 14351 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tcaagaggaagcgggaggag 118 |||||||||||||||||||| Sbjct: 1471 tcaagaggaagcgggaggag 1490
>ref|XM_654606.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2094.2), mRNA Length = 5577 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ccaagaagatcctccagctt 373 |||||||||||||||||||| Sbjct: 4970 ccaagaagatcctccagctt 4951
>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence Length = 175685 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgaagagtgtgagggagt 497 |||||||||||||||||||| Sbjct: 53455 cctgaagagtgtgagggagt 53436
>gb|AC004884.1| Homo sapiens PAC clone RP4-778K6 from 7, complete sequence Length = 138244 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 caagaggaagcgggaggagc 119 |||||||||||||||||||| Sbjct: 31207 caagaggaagcgggaggagc 31226
>ref|XM_001003478.1| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ttcagcttaagcgtgaggcc 265 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>ref|XM_884324.2| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ttcagcttaagcgtgaggcc 265 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>ref|XM_915939.2| PREDICTED: Mus musculus similar to UPF0139 protein CGI-140 (LOC619941), mRNA Length = 312 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 ttcagcttaagcgtgaggcc 265 |||||||||||||||||||| Sbjct: 161 ttcagcttaagcgtgaggcc 142
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cggagaaccgcaaggtcatc 190 |||||||||||||||||||| Sbjct: 1313803 cggagaaccgcaaggtcatc 1313822
>ref|XM_749527.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g09990) partial mRNA Length = 1314 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 aggccgtcgaggagaagaag 163 |||||||||||||||||||| Sbjct: 797 aggccgtcgaggagaagaag 816
>ref|XM_750090.1| Aspergillus fumigatus Af293 ATP-dependent RNA helicase (Afu2g08480) partial mRNA Length = 1896 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ccaaagaccaagaagatcct 366 |||||||||||||||||||| Sbjct: 1387 ccaaagaccaagaagatcct 1406
>ref|XM_388466.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08290.1) partial mRNA Length = 1722 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggtggtggtgccggagtcgg 92 |||||||||||||||||||| Sbjct: 1181 ggtggtggtgccggagtcgg 1162
>ref|XM_566981.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l7 (CNA06360) partial mRNA Length = 937 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ccaagaagatcctccagctt 373 |||||||||||||||||||| Sbjct: 341 ccaagaagatcctccagctt 360
>ref|XM_811890.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506775.180) partial mRNA Length = 1812 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gaagagtgtgagggagttga 500 |||||||||||||||||||| Sbjct: 315 gaagagtgtgagggagttga 296
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 ggaaagctcaacaagcaaag 537 |||||||||||||||||||| Sbjct: 56918 ggaaagctcaacaagcaaag 56899
>ref|XM_804506.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511165.109) partial mRNA Length = 463 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gaagagtgtgagggagttga 500 |||||||||||||||||||| Sbjct: 315 gaagagtgtgagggagttga 296
>ref|XM_849895.1| PREDICTED: Canis familiaris similar to 60S ribosomal protein L7 (LOC490819), mRNA Length = 933 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 580 ttgatctacaagtgtggttatggcaagatcaacaag 615
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccgaggcggcgaaggtggtggtgccgga 87 |||||||||| |||| |||||||||||| Sbjct: 4603 ccgaggcggccaagggggtggtgccgga 4630
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 ccgaggcggcgaaggtggtggtgccgga 87 |||||||||| |||| |||||||||||| Sbjct: 62904 ccgaggcggccaagggggtggtgccgga 62931
>gb|AF526208.1| Argopecten irradians isolate iolsaicl25ct43cn48 ribosomal protein L7 mRNA, partial cds Length = 822 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 aacaaggccaccatcaacatgctc 439 ||||||||||| |||||||||||| Sbjct: 378 aacaaggccactatcaacatgctc 401
>emb|AJ720578.1| Gallus gallus mRNA for hypothetical protein, clone 20k1 Length = 838 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 471 ttgatctacaagcgtggttatggcaagatcaacaag 506
>ref|NM_001006345.1| Gallus gallus ribosomal protein L7 (RPL7), mRNA Length = 838 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 471 ttgatctacaagcgtggttatggcaagatcaacaag 506
>gb|AE011744.1| Xanthomonas axonopodis pv. citri str. 306, section 122 of 469 of the complete genome Length = 10963 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 cggagaaccgcaaggtcatc 190 |||||||||||||||||||| Sbjct: 9661 cggagaaccgcaaggtcatc 9680
>emb|CR406282.1| Gallus gallus finished cDNA, clone ChEST860g6 Length = 1110 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 759 ttgatctacaagcgtggttatggcaagatcaacaag 794
>gb|AC152827.4| Mus musculus BAC clone RP23-60K23 from chromosome 12, complete sequence Length = 195066 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tcaagaggaagcgggaggag 118 |||||||||||||||||||| Sbjct: 118680 tcaagaggaagcgggaggag 118699
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 503 tacaagagaggttatggaaagctcaacaagca 534 |||||||||||||| || ||| |||||||||| Sbjct: 285597 tacaagagaggttacggtaagatcaacaagca 285628
>emb|CR352384.1| Gallus gallus finished cDNA, clone ChEST81i17 Length = 799 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 447 ttgatctacaagcgtggttatggcaagatcaacaag 482
>emb|CR353058.1| Gallus gallus finished cDNA, clone ChEST411a23 Length = 811 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 454 ttgatctacaagcgtggttatggcaagatcaacaag 489
>emb|CR338953.1| Gallus gallus finished cDNA, clone ChEST990c17 Length = 808 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 497 ttgatctacaagagaggttatggaaagctcaacaag 532 |||||||||||| | |||||||| ||| |||||||| Sbjct: 457 ttgatctacaagcgtggttatggcaagatcaacaag 492
>gb|AF319045.1|AF319045 Homo sapiens contactin-associated protein 2 (CNTNAP2) mRNA, complete cds Length = 8107 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aagaggaagcgggaggagct 120 |||||||||||||||||||| Sbjct: 10 aagaggaagcgggaggagct 29
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ccgaggcggcgaaggtggtggtgccgga 87 |||||||||| |||| |||||||||||| Sbjct: 20103587 ccgaggcggccaagggggtggtgccgga 20103560
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gagaagaagaagtcgacgga 174 |||||||||||||||||||| Sbjct: 19815726 gagaagaagaagtcgacgga 19815745
>dbj|AP003516.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0047D12 Length = 145981 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 gagaagaagaagtcgacgga 174 |||||||||||||||||||| Sbjct: 38684 gagaagaagaagtcgacgga 38703
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 caagcagtacgccgaggagt 221 |||||||||||||||||||| Sbjct: 4547439 caagcagtacgccgaggagt 4547420
>gb|AY004877.1| Mus musculus cytoplasmic dynein heavy chain mRNA, complete cds Length = 14351 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 tcaagaggaagcgggaggag 118 |||||||||||||||||||| Sbjct: 1471 tcaagaggaagcgggaggag 1490
>gb|AF134206.1|AF134206 Emericella nidulans DopAp (dopA) mRNA, complete cds Length = 5800 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ccaagaagatcctccagctt 373 |||||||||||||||||||| Sbjct: 5116 ccaagaagatcctccagctt 5097
>ref|NM_210820.1| Eremothecium gossypii AFL082Wp (AFL082W), mRNA Length = 732 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 503 tacaagagaggttatggaaagctcaacaagca 534 |||||||||||||| || ||| |||||||||| Sbjct: 442 tacaagagaggttacggtaagatcaacaagca 473
>gb|AY625898.1| Pseudomonas aeruginosa phage F116, complete genome Length = 65195 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cgccgagaagaagaccaagg 146 |||||||||||||||||||| Sbjct: 30065 cgccgagaagaagaccaagg 30084
>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete sequence Length = 203022 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 cctgaagagtgtgagggagt 497 |||||||||||||||||||| Sbjct: 69249 cctgaagagtgtgagggagt 69230
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tcaagaggaagcgggaggag 118 |||||||||||||||||||| Sbjct: 187854 tcaagaggaagcgggaggag 187835
>emb|AL935060.17| Mouse DNA sequence from clone RP24-151H6 on chromosome 2, complete sequence Length = 212007 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tttgagacagatattcaatg 398 |||||||||||||||||||| Sbjct: 211258 tttgagacagatattcaatg 211239
>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete sequence Length = 115361 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tttgagacagatattcaatg 398 |||||||||||||||||||| Sbjct: 1251 tttgagacagatattcaatg 1232
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 60 ccgaggcggcgaaggtggtggtgccgga 87 |||||||||| |||| |||||||||||| Sbjct: 20114863 ccgaggcggccaagggggtggtgccgga 20114836
>emb|BX293566.5| Mouse DNA sequence from clone RP23-441G5 on chromosome 2, complete sequence Length = 132841 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 aacaaggccaccatcaacat 435 |||||||||||||||||||| Sbjct: 58143 aacaaggccaccatcaacat 58162
>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c, complete sequence Length = 91116 Score = 40.1 bits (20), Expect = 7.4 Identities = 74/92 (80%) Strand = Plus / Plus Query: 329 ggtatcaatgccatgcacccaaagaccaagaagatcctccagcttttgcgtttgagacag 388 ||||| ||| ||||||| || ||||| | || |||| | ||||| ||| | ||||||||| Sbjct: 19867 ggtattaatcccatgcatcctaagacaaggaggatcttgcagctgttgaggttgagacag 19926 Query: 389 atattcaatggagtgttcctcaaggttaacaa 420 || || |||||||| || || || |||||||| Sbjct: 19927 atttttaatggagtttttcttaaagttaacaa 19958
>emb|AL691489.20| Mouse DNA sequence from clone RP23-176N9 on chromosome 2, complete sequence Length = 194864 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ttcagcttaagcgtgaggcc 265 |||||||||||||||||||| Sbjct: 63769 ttcagcttaagcgtgaggcc 63788 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,870,866 Number of Sequences: 3902068 Number of extensions: 4870866 Number of successful extensions: 94590 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93819 Number of HSP's gapped (non-prelim): 731 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
