ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16h11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X89563.1|HVRPS1223 H.vulgare chloroplast DNA for rps12 gene exons 2 and 3 Length = 1895 Score = 484 bits (244), Expect = e-133 Identities = 244/244 (100%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 679 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 739 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 799 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 859 Query: 457 cttc 460 |||| Sbjct: 860 cttc 863 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 463 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 523 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 576
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125477 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 125536 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125537 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 125596 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 125597 ataagacgtgatttgatctgcatatgtttggtaaaagaacaatcttctcctttaatcata 125656 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125657 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 125716 Query: 457 cttc 460 |||| Sbjct: 125717 cttc 125720 Score = 476 bits (240), Expect = e-131 Identities = 243/244 (99%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89417 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 89358 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89357 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 89298 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 89297 ataagacgtgatttgatctgcatatgtttggtaaaagaacaatcttctcctttaatcata 89238 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89237 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 89178 Query: 457 cttc 460 |||| Sbjct: 89177 cttc 89174 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125262 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 125320 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125321 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 125380 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125381 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 125433 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89632 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 89574 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89573 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 89514 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89513 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 89461
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125493 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 125552 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125553 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 125612 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 125613 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 125667 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125668 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 125727 Query: 457 cttc 460 |||| Sbjct: 125728 cttc 125731 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89663 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 89604 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89603 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 89544 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 89543 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 89489 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89488 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 89429 Query: 457 cttc 460 |||| Sbjct: 89428 cttc 89425 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125276 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 125334 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125335 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 125394 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125395 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 125447 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89880 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 89822 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89821 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 89762 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89761 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 89709
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125493 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 125552 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125553 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 125612 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 125613 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 125667 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125668 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 125727 Query: 457 cttc 460 |||| Sbjct: 125728 cttc 125731 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89663 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 89604 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89603 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 89544 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 89543 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 89489 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89488 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 89429 Query: 457 cttc 460 |||| Sbjct: 89428 cttc 89425 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125276 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 125334 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125335 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 125394 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125395 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 125447 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89880 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 89822 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89821 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 89762 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89761 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 89709
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125442 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 125501 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125502 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 125561 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 125562 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 125616 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125617 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 125676 Query: 457 cttc 460 |||| Sbjct: 125677 cttc 125680 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89608 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 89549 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89548 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 89489 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 89488 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 89434 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89433 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 89374 Query: 457 cttc 460 |||| Sbjct: 89373 cttc 89370 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125225 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 125283 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125284 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 125343 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125344 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 125396 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89825 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 89767 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89766 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 89707 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89706 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 89654
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125461 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 125520 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125521 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 125580 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 125581 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 125635 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125636 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 125695 Query: 457 cttc 460 |||| Sbjct: 125696 cttc 125699 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89657 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 89598 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89597 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 89538 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 89537 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 89483 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89482 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 89423 Query: 457 cttc 460 |||| Sbjct: 89422 cttc 89419 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125244 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 125302 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125303 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 125362 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125363 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 125415 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89874 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 89816 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89815 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 89756 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89755 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 89703
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116709 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 116650 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116649 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 116590 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 116589 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 116535 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116534 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 116475 Query: 457 cttc 460 |||| Sbjct: 116474 cttc 116471 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84833 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 84774 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84773 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 84714 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 84713 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 84659 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84658 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 84599 Query: 457 cttc 460 |||| Sbjct: 84598 cttc 84595 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61088 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 61147 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61148 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 61207 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 61208 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 61262 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61263 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 61322 Query: 457 cttc 460 |||| Sbjct: 61323 cttc 61326 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36516 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 36457 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36456 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 36397 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 36396 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 36342 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36341 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 36282 Query: 457 cttc 460 |||| Sbjct: 36281 cttc 36278 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8431 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 8372 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8371 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 8312 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8311 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 8257 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8256 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 8197 Query: 457 cttc 460 |||| Sbjct: 8196 cttc 8193 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85050 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 84992 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84991 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 84932 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84931 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 84879 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36733 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 36675 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36674 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 36615 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36614 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 36562 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116925 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 116867 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116866 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 116807 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 116806 aggttctctattgatgcaaacgctatacctagaggatagggatagaggaagag 116754 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8647 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 8589 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8588 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 8529 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 8528 aggttctctattgatgcaaacgctatacctagaggatagggatagaggaagag 8476 Score = 311 bits (157), Expect = 1e-81 Identities = 171/173 (98%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60872 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 60930 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60931 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 60990 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 60991 aggttctctattgatgcaaacgctgtacctagaggataggga-agaggaagag 61042
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163324 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 163265 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163264 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 163205 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 163204 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 163150 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163149 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 163090 Query: 457 cttc 460 |||| Sbjct: 163089 cttc 163086 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135239 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 135180 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135179 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 135120 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135119 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 135065 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135064 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 135005 Query: 457 cttc 460 |||| Sbjct: 135004 cttc 135001 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163541 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 163483 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163482 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 163423 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163422 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 163370 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135455 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 135397 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135396 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 135337 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135336 aggttctctattgatgcaaacgctatacctagaggatagggatagaggaagag 135284
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9262588 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9262529 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9262528 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9262469 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9262468 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9262414 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9262413 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9262354 Query: 457 cttc 460 |||| Sbjct: 9262353 cttc 9262350 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9222088 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9222029 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9222028 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9221969 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9221968 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9221914 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9221913 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9221854 Query: 457 cttc 460 |||| Sbjct: 9221853 cttc 9221850 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9203760 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9203701 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9203700 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9203641 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9203640 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9203586 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9203585 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9203526 Query: 457 cttc 460 |||| Sbjct: 9203525 cttc 9203522 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9158683 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9158624 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9158623 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9158564 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9158563 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9158509 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9158508 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9158449 Query: 457 cttc 460 |||| Sbjct: 9158448 cttc 9158445 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126807 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9126748 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126747 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9126688 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9126687 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9126633 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126632 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9126573 Query: 457 cttc 460 |||| Sbjct: 9126572 cttc 9126569 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9103062 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9103121 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9103122 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9103181 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9103182 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9103236 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9103237 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9103296 Query: 457 cttc 460 |||| Sbjct: 9103297 cttc 9103300 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9078590 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9078531 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9078530 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9078471 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9078470 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9078416 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9078415 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9078356 Query: 457 cttc 460 |||| Sbjct: 9078355 cttc 9078352 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9050505 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9050446 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9050445 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9050386 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9050385 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9050331 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9050330 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9050271 Query: 457 cttc 460 |||| Sbjct: 9050270 cttc 9050267 Score = 434 bits (219), Expect = e-118 Identities = 237/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19112987 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 19112928 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19112927 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 19112868 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19112867 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 19112813 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19112812 cataaatgaaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 19112753 Query: 458 ttc 460 ||| Sbjct: 19112752 ttc 19112750 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19113202 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 19113144 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19113143 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 19113084 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19113083 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 19113031 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9262805 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9262747 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9262746 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9262687 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9262686 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 9262634 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9222305 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9222247 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9222246 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9222187 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9222186 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 9222134 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9203977 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9203919 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9203918 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9203859 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9203858 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 9203806 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9127024 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9126966 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126965 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9126906 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9126905 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 9126853 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9078807 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9078749 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9078748 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9078689 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9078688 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 9078636 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9158899 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9158841 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9158840 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9158781 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9158780 aggttctctattgatgcaaacgctatacctagaggatagggatagaggaagag 9158728 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9050721 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9050663 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9050662 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9050603 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9050602 aggttctctattgatgcaaacgctatacctagaggatagggatagaggaagag 9050550 Score = 311 bits (157), Expect = 1e-81 Identities = 171/173 (98%), Gaps = 2/173 (1%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9102846 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 9102904 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9102905 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9102964 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9102965 aggttctctattgatgcaaacgctgtacctagaggataggga-agaggaagag 9103016 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/46 (89%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 311 gataccgagaaagatttcttcttattataagacgtgatttgatccg 356 ||||| |||||| ||| ||||||| |||||||||||||||||||| Sbjct: 24280304 gatactgagaaatattccttctta--ataagacgtgatttgatccg 24280261 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tttaatcatatcataaatggaaag 410 ||||||||||||||||||| |||| Sbjct: 27538807 tttaatcatatcataaatgcaaag 27538830
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9247408 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 9247467 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9247468 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 9247527 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9247528 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 9247582 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9247583 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 9247642 Query: 457 cttc 460 |||| Sbjct: 9247643 cttc 9247646 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9247190 tgcctaaccgcatgg-ataagctcacattaacccgtctattttggatccaattcgggatt 9247248 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9247249 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 9247308 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9247309 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 9247361
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14182109 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 14182168 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14182169 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 14182228 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14182229 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 14182283 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14182284 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 14182343 Query: 457 cttc 460 |||| Sbjct: 14182344 cttc 14182347 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14181892 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 14181950 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14181951 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 14182010 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14182011 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 14182063 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 38 aattttggatccaattcgggatttttcttgggaagtttcgggaagaaattggaatggaat 97 ||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1123816 aatttcggatccaattcaggatttttcttggaaagtttcgggaagaaattggaatggaat 1123757 Query: 98 aatata 103 |||||| Sbjct: 1123756 aatata 1123751 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 101 atagattcatacagaggaaaaggttctctattgatgc 137 ||||||||||| ||| |||| |||| ||||||||||| Sbjct: 1122670 atagattcatatagacgaaagggttatctattgatgc 1122634
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14343849 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 14343790 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14343789 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 14343730 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14343729 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 14343675 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14343674 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 14343615 Query: 457 cttc 460 |||| Sbjct: 14343614 cttc 14343611 Score = 426 bits (215), Expect = e-116 Identities = 237/243 (97%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813875 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 813934 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813935 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 813994 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 813995 taagacgtgatttgatccgcatatgtttggt-aaagaacaatcttctccttta-----at 814048 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814049 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 814108 Query: 458 ttc 460 ||| Sbjct: 814109 ttc 814111 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14344065 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 14344007 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14344006 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 14343947 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14343946 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 14343894 Score = 299 bits (151), Expect = 4e-78 Identities = 168/171 (98%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 3 cctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 813661 cctaaccgcatgg-ataagctcacattaacc-gtcaattttggatccaattcgggatttt 813718 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813719 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 813778 Query: 123 gttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 813779 gttctctattgatgcaaacgttgtacctagaggatagggatagaggaagag 813829
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58621 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 58680 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58681 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 58740 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 58741 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 58795 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58796 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 58855 Query: 457 cttc 460 |||| Sbjct: 58856 cttc 58859 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 58403 tgcctaaccgcatgg-ataagctcacattaacccgtctattttggatccaattcgggatt 58461 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58462 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 58521 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58522 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 58574
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4853 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 4912 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4913 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 4972 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4973 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 5027 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5028 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 5087 Query: 457 cttc 460 |||| Sbjct: 5088 cttc 5091 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4636 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 4694 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4695 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 4754 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4755 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 4807
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66990 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 67049 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67050 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 67109 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 67110 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 67164 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67165 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 67224 Query: 457 cttc 460 |||| Sbjct: 67225 cttc 67228 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66773 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 66831 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66832 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 66891 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66892 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 66944
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65771 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 65712 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65711 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 65652 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 65651 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 65597 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65596 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 65537 Query: 457 cttc 460 |||| Sbjct: 65536 cttc 65533 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65987 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 65929 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65928 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 65869 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65868 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 65816
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125436 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 125495 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125496 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 125555 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 125556 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 125610 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125611 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 125670 Query: 457 cttc 460 |||| Sbjct: 125671 cttc 125674 Score = 444 bits (224), Expect = e-121 Identities = 239/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89603 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 89544 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89543 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 89484 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 89483 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 89429 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89428 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 89369 Query: 457 cttc 460 |||| Sbjct: 89368 cttc 89365 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125219 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 125277 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125278 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 125337 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125338 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 125390 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89820 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 89762 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89761 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 89702 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89701 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 89649
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 442 bits (223), Expect = e-121 Identities = 238/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87848 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 87789 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87788 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 87729 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 87728 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 87674 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87673 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 87614 Query: 458 ttc 460 ||| Sbjct: 87613 ttc 87611 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88064 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 88006 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88005 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 87946 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87945 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 87893
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 442 bits (223), Expect = e-121 Identities = 238/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21912 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 21853 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21852 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 21793 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 21792 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 21738 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21737 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 21678 Query: 458 ttc 460 ||| Sbjct: 21677 ttc 21675 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22128 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 22070 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22069 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 22010 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22009 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 21957
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 442 bits (223), Expect = e-121 Identities = 238/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10381456 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 10381397 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10381396 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 10381337 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10381336 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 10381282 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10381281 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 10381222 Query: 458 ttc 460 ||| Sbjct: 10381221 ttc 10381219 Score = 434 bits (219), Expect = e-118 Identities = 237/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282848 aagtcaaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 10282907 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282908 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 10282967 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10282968 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 10283022 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283023 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 10283082 Query: 458 ttc 460 ||| Sbjct: 10283083 ttc 10283085 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19932792 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 19932734 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19932733 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 19932674 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19932673 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 19932621 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10381672 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 10381614 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10381613 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 10381554 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10381553 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 10381501 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282631 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 10282689 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282690 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 10282749 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282750 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 10282802 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatga 251 ||||||||||||||||||||||||||||||||||| Sbjct: 19932575 taagtcgaagatagaagagcccagattccaaatga 19932541
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 442 bits (223), Expect = e-121 Identities = 238/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387495 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 10387436 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387435 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 10387376 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10387375 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 10387321 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387320 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 10387261 Query: 458 ttc 460 ||| Sbjct: 10387260 ttc 10387258 Score = 434 bits (219), Expect = e-118 Identities = 237/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10288887 aagtcaaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 10288946 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10288947 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 10289006 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 10289007 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 10289061 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10289062 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 10289121 Query: 458 ttc 460 ||| Sbjct: 10289122 ttc 10289124 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19944068 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 19944010 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19944009 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 19943950 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19943949 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 19943897 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387711 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 10387653 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387652 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 10387593 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387592 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 10387540 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10288670 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 10288728 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10288729 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 10288788 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10288789 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 10288841 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatga 251 ||||||||||||||||||||||||||||||||||| Sbjct: 19943851 taagtcgaagatagaagagcccagattccaaatga 19943817
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 331196 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 331255 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331256 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 331315 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 331316 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 331370 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331371 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 331430 Query: 457 cttc 460 |||| Sbjct: 331431 cttc 331434 Score = 272 bits (137), Expect = 9e-70 Identities = 165/173 (95%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 330986 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 331044 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 331045 tttcttgggaagtttcgggaagaaat-----tggaataatatcgattcatacagaggaaa 331099 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331100 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 331152
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 129253 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 129312 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129313 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 129372 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 129373 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 129427 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129428 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 129487 Query: 457 cttc 460 |||| Sbjct: 129488 cttc 129491 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93484 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 93425 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93424 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 93365 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 93364 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 93310 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93309 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 93250 Query: 457 cttc 460 |||| Sbjct: 93249 cttc 93246 Score = 258 bits (130), Expect = 1e-65 Identities = 165/174 (94%), Gaps = 7/174 (4%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129042 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 129100 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 129101 tttcttgggaagtttcgggaagaaat-----tggaataatatcgattcatacagaggaaa 129155 Query: 121 aggttctctattgatgcaaacgctgtacct-agaggatagggatagaggaagag 173 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 129156 aagttctctattgatgcaaacgctgtacctcagaggatagggatagaggaagag 129209 Score = 258 bits (130), Expect = 1e-65 Identities = 165/174 (94%), Gaps = 7/174 (4%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93695 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 93637 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 93636 tttcttgggaagtttcgggaagaaat-----tggaataatatcgattcatacagaggaaa 93582 Query: 121 aggttctctattgatgcaaacgctgtacct-agaggatagggatagaggaagag 173 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 93581 aagttctctattgatgcaaacgctgtacctcagaggatagggatagaggaagag 93528
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 50492 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 50551 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50552 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 50611 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 50612 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 50666 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50667 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 50726 Query: 457 cttc 460 |||| Sbjct: 50727 cttc 50730 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14626 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 14567 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14566 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 14507 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 14506 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 14452 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14451 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 14392 Query: 457 cttc 460 |||| Sbjct: 14391 cttc 14388 Score = 311 bits (157), Expect = 1e-81 Identities = 170/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50277 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 50335 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 50336 tttcttgggaagtttcgggaagaaattggaatggaataatatcgattcatacagaggaaa 50395 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50396 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 50448 Score = 311 bits (157), Expect = 1e-81 Identities = 170/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14841 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 14783 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14782 tttcttgggaagtttcgggaagaaattggaatggaataatatcgattcatacagaggaaa 14723 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14722 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 14670
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33573824 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 33573765 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33573764 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 33573705 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 33573704 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 33573650 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 33573649 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttatt 33573590 Query: 457 cttc 460 |||| Sbjct: 33573589 cttc 33573586 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33574041 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 33573983 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33573982 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 33573923 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33573922 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 33573870 Score = 321 bits (162), Expect = 1e-84 Identities = 198/210 (94%), Gaps = 5/210 (2%) Strand = Plus / Plus Query: 251 aagaaatggaaactcgaaaaggatccttctgattctcaaagaatgaggggcaaggggatt 310 |||||||||||||| |||||| ||| |||| ||||||||||||| ||||| ||||||||| Sbjct: 12345878 aagaaatggaaacttgaaaagaatcattcttattctcaaagaataaggggtaaggggatt 12345937 Query: 311 gataccgagaaagatttcttcttattataagacgtgatttgatccgcatatgtttggtaa 370 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12345938 gataccgagaaagatttctttttattataagacgtgatttgatccgcatatgtttggtaa 12345997 Query: 371 aagaacaatcttctcctttaatcatatcataaatggaaagtgttcaattagaacatgaaa 430 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 12345998 aagaacaatcttctccttta-----atcataaatggaaagtgttcaattagaacatgaaa 12346052 Query: 431 acgtgactcaattggtcttagttagtcttc 460 |||||||||||||||||||||||||||||| Sbjct: 12346053 acgtgactcaattggtcttagttagtcttc 12346082
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119021 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 118962 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118961 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 118902 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 118901 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 118847 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 118846 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttatt 118787 Query: 457 cttc 460 |||| Sbjct: 118786 cttc 118783 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119238 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 119180 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119179 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 119120 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119119 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 119067
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 129321 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 129380 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129381 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 129440 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 129441 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 129495 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129496 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 129555 Query: 457 cttc 460 |||| Sbjct: 129556 cttc 129559 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 93516 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 93457 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93456 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 93397 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 93396 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 93342 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93341 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 93282 Query: 457 cttc 460 |||| Sbjct: 93281 cttc 93278 Score = 272 bits (137), Expect = 9e-70 Identities = 165/173 (95%), Gaps = 6/173 (3%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129111 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 129169 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 129170 tttcttgggaagtttcgggaagaaat-----tggaataatatcgattcatacagaggaaa 129224 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129225 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129277 Score = 272 bits (137), Expect = 9e-70 Identities = 165/173 (95%), Gaps = 6/173 (3%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93726 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 93668 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 93667 tttcttgggaagtttcgggaagaaat-----tggaataatatcgattcatacagaggaaa 93613 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93612 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 93560
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130048 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 130107 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130108 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 130167 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130168 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 130222 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130223 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 130282 Query: 457 cttc 460 |||| Sbjct: 130283 cttc 130286 Score = 436 bits (220), Expect = e-119 Identities = 238/244 (97%), Gaps = 5/244 (2%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 94183 taagtcgaagatagaagagcccagattcaaaatgaagaaatggaaactcgaaaaggatcc 94124 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94123 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 94064 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcata 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 94063 ataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----a 94009 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94008 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 93949 Query: 457 cttc 460 |||| Sbjct: 93948 cttc 93945 Score = 311 bits (157), Expect = 1e-81 Identities = 170/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129833 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 129891 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 129892 tttcttgggaagtttcgggaagaaattggaatggaataatatcgattcatacagaggaaa 129951 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129952 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130004 Score = 311 bits (157), Expect = 1e-81 Identities = 170/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94398 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 94340 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94339 tttcttgggaagtttcgggaagaaattggaatggaataatatcgattcatacagaggaaa 94280 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94279 aagttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 94227
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 434 bits (219), Expect = e-118 Identities = 237/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64173 aagtcaaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 64232 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64233 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 64292 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 64293 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 64347 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64348 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 64407 Query: 458 ttc 460 ||| Sbjct: 64408 ttc 64410 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63956 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 64014 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64015 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 64074 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64075 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 64127
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 434 bits (219), Expect = e-118 Identities = 237/243 (97%), Gaps = 5/243 (2%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46508 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 46449 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46448 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 46389 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 46388 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta-----at 46334 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46333 cataaatgaaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 46274 Query: 458 ttc 460 ||| Sbjct: 46273 ttc 46271 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46723 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 46665 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46664 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 46605 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46604 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 46552
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 426 bits (215), Expect = e-116 Identities = 237/243 (97%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23083 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 23142 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23143 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 23202 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 23203 taagacgtgatttgatccgcatatgtttggt-aaagaacaatcttctccttta-----at 23256 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23257 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 23316 Query: 458 ttc 460 ||| Sbjct: 23317 ttc 23319 Score = 299 bits (151), Expect = 4e-78 Identities = 168/171 (98%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 3 cctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22869 cctaaccgcatgg-ataagctcacattaacc-gtcaattttggatccaattcgggatttt 22926 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22927 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 22986 Query: 123 gttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22987 gttctctattgatgcaaacgttgtacctagaggatagggatagaggaagag 23037
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 426 bits (215), Expect = e-116 Identities = 237/243 (97%), Gaps = 6/243 (2%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92006 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 92065 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92066 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatta 92125 Query: 338 taagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcatat 397 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 92126 taagacgtgatttgatccgcatatgtttggt-aaagaacaatcttctccttta-----at 92179 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92180 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 92239 Query: 458 ttc 460 ||| Sbjct: 92240 ttc 92242 Score = 299 bits (151), Expect = 4e-78 Identities = 168/171 (98%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 3 cctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 91792 cctaaccgcatgg-ataagctcacattaacc-gtcaattttggatccaattcgggatttt 91849 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91850 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 91909 Query: 123 gttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 91910 gttctctattgatgcaaacgttgtacctagaggatagggatagaggaagag 91960
>gb|M17841.1|MZECPRPS2 Maize chloroplast ribosomal protein S12 gene, exons 2 and 3, and ribosomal protein S7 gene, complete cds Length = 1756 Score = 337 bits (170), Expect = 2e-89 Identities = 185/190 (97%), Gaps = 5/190 (2%) Strand = Plus / Plus Query: 271 ggatccttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttctt 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggatccttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttctt 60 Query: 331 cttattataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cttattataagacgtgatttgatccgcatatgtttggtaaaagaacaatcttctccttta 120 Query: 391 atcatatcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtctta 450 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 -----atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtctta 175 Query: 451 gttagtcttc 460 |||||||||| Sbjct: 176 gttagtcttc 185
>dbj|AB128767.1| Oryza nivara chloroplast DNA, containing SSR region (RCt10), strain:SL10 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128766.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt10), strain:2001-SL8 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128765.1| Oryza rhizomatis chloroplast DNA, containing SSR region (RCt10), strain:2001-SL3 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128764.1| Oryza alta chloroplast DNA, containing SSR region (RCt10), strain:105138 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128763.1| Oryza punctata chloroplast DNA, containing SSR region (RCt10), strain:104154 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128762.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt10), strain:W2199 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128761.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt10), strain:103812 Length = 355 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 245 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 185 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 132 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128760.1| Oryza punctata chloroplast DNA, containing SSR region (RCt10), strain:103887 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128759.1| Oryza brachyantha chloroplast DNA, containing SSR region (RCt10), strain:101232 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128758.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt10), strain:105267 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128757.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt10), strain:103318 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128756.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt10), strain:101410 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128755.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt10), strain:101397 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128754.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt10), strain:W1635 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128753.1| Oryza meridionalis chloroplast DNA, containing SSR region (RCt10), strain:W1625 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128752.1| Oryza punctata chloroplast DNA, containing SSR region (RCt10), strain:W1514 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128751.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt10), strain:W1169 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128750.1| Oryza barthii chloroplast DNA, containing SSR region (RCt10), strain:W0652 Length = 355 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 245 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 185 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 132 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128749.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt10), strain:W0120 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128748.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt10), strain:W1499 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 161 bits (81), Expect = 2e-36 Identities = 84/85 (98%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccgaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128747.1| Oryza glumipatula chloroplast DNA, containing SSR region (RCt10), strain:W1183 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128746.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt10), strain:W2078 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128745.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt10), strain:W1421 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 161 bits (81), Expect = 2e-36 Identities = 84/85 (98%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccgaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128744.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt10), strain:W2099 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128743.1| Oryza longistaminata chloroplast DNA, containing SSR region (RCt10), strain:W1650 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 161 bits (81), Expect = 2e-36 Identities = 84/85 (98%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccgaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128742.1| Oryza sativa chloroplast DNA, containing SSR region (RCt10) Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128741.1| Oryza rufipogon chloroplast DNA, containing SSR region (RCt10), strain:W0157 Length = 354 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 244 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 184 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 131 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128740.1| Oryza glaberrima chloroplast DNA, containing SSR region (RCt10), strain:Tog5923 Length = 355 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 245 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 185 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 132 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128739.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt10), strain:W1620 Length = 364 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 254 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 194 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 141 Score = 161 bits (81), Expect = 2e-36 Identities = 84/85 (98%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccggattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128738.1| Leersia tisserantii chloroplast DNA, containing SSR region (RCt10), strain:W1345 Length = 364 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 254 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 194 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 141 Score = 161 bits (81), Expect = 2e-36 Identities = 84/85 (98%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccggattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128737.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt10), strain:W0048 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128736.1| Oryza granulata chloroplast DNA, containing SSR region (RCt10), strain:W0022 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128735.1| Oryza granulata chloroplast DNA, containing SSR region (RCt10), strain:W0067 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128734.1| Oryza australiensis chloroplast DNA, containing SSR region (RCt10), strain:W1639 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128733.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt10), strain:W0001 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128732.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt10), strain:W1220 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128731.1| Oryza ridleyi chloroplast DNA, containing SSR region (RCt10), strain:W0604 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128730.1| Oryza longiglumis chloroplast DNA, containing SSR region (RCt10), strain:W1228 Length = 352 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 242 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 182 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 129 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128729.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt10), strain:W1480B Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128728.1| Oryza alta chloroplast DNA, containing SSR region (RCt10), strain:W0018 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128727.1| Oryza grandiglumis chloroplast DNA, containing SSR region (RCt10), strain:W0613 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128726.1| Oryza punctata chloroplast DNA, containing SSR region (RCt10), strain:W1564 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128725.1| Oryza punctata chloroplast DNA, containing SSR region (RCt10), strain:W0043 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128724.1| Oryza eichingeri chloroplast DNA, containing SSR region (RCt10), strain:W1525 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128723.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt10), strain:W0614 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128722.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt10), strain:NIAS WBC6 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128721.1| Oryza punctata chloroplast DNA, containing SSR region (RCt10), strain:W0015 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128720.1| Oryza minuta chloroplast DNA, containing SSR region (RCt10), strain:W1213 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128719.1| Oryza latifolia chloroplast DNA, containing SSR region (RCt10), strain:W1181 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128718.1| Oryza minuta chloroplast DNA, containing SSR region (RCt10), strain:W1337 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>dbj|AB128717.1| Oryza officinalis chloroplast DNA, containing SSR region (RCt10), strain:W0002 Length = 353 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 243 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 183 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 130 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 26 Query: 277 ttctgattctcaaagaatgaggggc 301 ||||||||||||||||||||||||| Sbjct: 25 ttctgattctcaaagaatgaggggc 1
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 327 bits (165), Expect = 2e-86 Identities = 172/173 (99%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53251 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 53309 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53310 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 53369 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53370 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 53422 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatga 251 ||||||||||||||||||||||||||||||||||| Sbjct: 53468 taagtcgaagatagaagagcccagattccaaatga 53502
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 321 bits (162), Expect = 1e-84 Identities = 198/210 (94%), Gaps = 5/210 (2%) Strand = Plus / Plus Query: 251 aagaaatggaaactcgaaaaggatccttctgattctcaaagaatgaggggcaaggggatt 310 |||||||||||||| |||||| ||| |||| ||||||||||||| ||||| ||||||||| Sbjct: 31523 aagaaatggaaacttgaaaagaatcattcttattctcaaagaataaggggtaaggggatt 31582 Query: 311 gataccgagaaagatttcttcttattataagacgtgatttgatccgcatatgtttggtaa 370 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 31583 gataccgagaaagatttctttttattataagacgtgatttgatccgcatatgtttggtaa 31642 Query: 371 aagaacaatcttctcctttaatcatatcataaatggaaagtgttcaattagaacatgaaa 430 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 31643 aagaacaatcttctccttta-----atcataaatggaaagtgttcaattagaacatgaaa 31697 Query: 431 acgtgactcaattggtcttagttagtcttc 460 |||||||||||||||||||||||||||||| Sbjct: 31698 acgtgactcaattggtcttagttagtcttc 31727
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140223 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 140281 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140282 tttcttgggaagttttgggaagaaattggaatggaataatatagattcatacagaggaaa 140341 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140342 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 140394 Score = 293 bits (148), Expect = 3e-76 Identities = 148/148 (100%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140439 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 140498 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140499 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 140558 Query: 337 ataagacgtgatttgatccgcatatgtt 364 |||||||||||||||||||||||||||| Sbjct: 140559 ataagacgtgatttgatccgcatatgtt 140586
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3310 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 3368 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3369 tttcttgggaagttttgggaagaaattggaatggaataatatagattcatacagaggaaa 3428 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3429 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 3481 Score = 293 bits (148), Expect = 3e-76 Identities = 148/148 (100%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3526 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 3585 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3586 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 3645 Query: 337 ataagacgtgatttgatccgcatatgtt 364 |||||||||||||||||||||||||||| Sbjct: 3646 ataagacgtgatttgatccgcatatgtt 3673
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 319 bits (161), Expect = 4e-84 Identities = 171/173 (98%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12842764 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatccaattcgggatt 12842822 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaa 120 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12842823 tttcttgggaagttttgggaagaaattggaatggaataatatagattcatacagaggaaa 12842882 Query: 121 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12842883 aggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 12842935 Score = 293 bits (148), Expect = 3e-76 Identities = 148/148 (100%) Strand = Plus / Plus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12842980 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 12843039 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12843040 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 12843099 Query: 337 ataagacgtgatttgatccgcatatgtt 364 |||||||||||||||||||||||||||| Sbjct: 12843100 ataagacgtgatttgatccgcatatgtt 12843127 Score = 280 bits (141), Expect = 4e-72 Identities = 173/183 (94%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 7934713 taagttgaagatagaagagcccagattccaaatgaagaaatagaaactcgaaaaggatcc 7934654 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 7934653 ttctaattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttgtt 7934594 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaa---gaacaatcttctcctttaatc 393 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 7934593 gtaagaagtgatttgatccgcatatgtttggtaaaaaagaaacaatcttctcctttaatc 7934534 Query: 394 ata 396 ||| Sbjct: 7934533 ata 7934531
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17, complete sequence Length = 174949 Score = 280 bits (141), Expect = 4e-72 Identities = 173/183 (94%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24303 taagttgaagatagaagagcccagattccaaatgaagaaatagaaactcgaaaaggatcc 24244 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 24243 ttctaattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttgtt 24184 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaa---gaacaatcttctcctttaatc 393 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 24183 gtaagaagtgatttgatccgcatatgtttggtaaaaaagaaacaatcttctcctttaatc 24124 Query: 394 ata 396 ||| Sbjct: 24123 ata 24121
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 280 bits (141), Expect = 4e-72 Identities = 173/183 (94%), Gaps = 3/183 (1%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcc 276 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119488 taagttgaagatagaagagcccagattccaaatgaagaaatagaaactcgaaaaggatcc 119429 Query: 277 ttctgattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttatt 336 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 119428 ttctaattctcaaagaatgaggggcaaggggattgataccgagaaagatttcttcttgtt 119369 Query: 337 ataagacgtgatttgatccgcatatgtttggtaaaa---gaacaatcttctcctttaatc 393 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 119368 gtaagaagtgatttgatccgcatatgtttggtaaaaaagaaacaatcttctcctttaatc 119309 Query: 394 ata 396 ||| Sbjct: 119308 ata 119306
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 204 bits (103), Expect = 2e-49 Identities = 218/254 (85%), Gaps = 18/254 (7%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 133498 aagtagaagatagaagagcccagattccaaatgaacaaattcaaactcgaaaaggatctt 133557 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagat------ttcttc 331 |||| ||||| ||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 133558 tctggttctcgaagaatgaggggcaaagggattgat--cgagaaagatctcttgttcttc 133615 Query: 332 ttattataaga----cgtgatttgatccgcatatgtttggt-aaaagaacaatcttctcc 386 |||| || ||| | |||||||||||||||| ||||||| ||||||| |||||||||| Sbjct: 133616 ttataattagaagatcttgatttgatccgcataggtttggtaaaaagaagaatcttctcc 133675 Query: 387 tttaatcatatcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggt 446 ||| ||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct: 133676 ttt-----tatcataaatggaaagtgttcaattggaacatgaaaacgtgaatgaattggt 133730 Query: 447 cttagttagtcttc 460 || ||||| ||||| Sbjct: 133731 ctgagttactcttc 133744 Score = 204 bits (103), Expect = 2e-49 Identities = 218/254 (85%), Gaps = 18/254 (7%) Strand = Plus / Minus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||| |||||||||||||||||||||||||||||| |||| |||||||||||||||| | Sbjct: 101424 aagtagaagatagaagagcccagattccaaatgaacaaattcaaactcgaaaaggatctt 101365 Query: 278 tctgattctcaaagaatgaggggcaaggggattgataccgagaaagat------ttcttc 331 |||| ||||| ||||||||||||||| ||||||||| |||||||||| |||||| Sbjct: 101364 tctggttctcgaagaatgaggggcaaagggattgat--cgagaaagatctcttgttcttc 101307 Query: 332 ttattataaga----cgtgatttgatccgcatatgtttggt-aaaagaacaatcttctcc 386 |||| || ||| | |||||||||||||||| ||||||| ||||||| |||||||||| Sbjct: 101306 ttataattagaagatcttgatttgatccgcataggtttggtaaaaagaagaatcttctcc 101247 Query: 387 tttaatcatatcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggt 446 ||| ||||||||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct: 101246 ttt-----tatcataaatggaaagtgttcaattggaacatgaaaacgtgaatgaattggt 101192 Query: 447 cttagttagtcttc 460 || ||||| ||||| Sbjct: 101191 ctgagttactcttc 101178 Score = 182 bits (92), Expect = 7e-43 Identities = 153/171 (89%), Gaps = 3/171 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct: 133141 taaccgcatgg-ataagctcacactaacccgtccattttggatccaattcgggattttcc 133199 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 || ||| || |||||||| |||||||||| || ||||| |||||||||||| |||||||| Sbjct: 133200 ttaggaggtatcgggaaggaattggaatgtaagaatatcgattcatacagaagaaaaggt 133259 Query: 125 tctctattgatgcaaacgctgtacctagagg--atagggatagaggaagag 173 ||||||||||| |||||||| |||||| || |||||||||||||||||| Sbjct: 133260 tctctattgattcaaacgctatacctatgggatatagggatagaggaagag 133310 Score = 182 bits (92), Expect = 7e-43 Identities = 153/171 (89%), Gaps = 3/171 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct: 101781 taaccgcatgg-ataagctcacactaacccgtccattttggatccaattcgggattttcc 101723 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 || ||| || |||||||| |||||||||| || ||||| |||||||||||| |||||||| Sbjct: 101722 ttaggaggtatcgggaaggaattggaatgtaagaatatcgattcatacagaagaaaaggt 101663 Query: 125 tctctattgatgcaaacgctgtacctagagg--atagggatagaggaagag 173 ||||||||||| |||||||| |||||| || |||||||||||||||||| Sbjct: 101662 tctctattgattcaaacgctatacctatgggatatagggatagaggaagag 101612
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 202 bits (102), Expect = 7e-49 Identities = 203/231 (87%), Gaps = 8/231 (3%) Strand = Plus / Plus Query: 236 cccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctcaaagaatg 295 ||||||||||||||||| |||| |||||||||||||||| ||| ||||||| ||||||| Sbjct: 139884 cccagattccaaatgaacaaattcaaactcgaaaaggatctttcggattctcgaagaatg 139943 Query: 296 aggggcaaggggattgataccgagaaagatttct---tcttattataaga-cgtgatttg 351 |||||||| ||||||||| ||||||| || ||| ||||||||||||| | ||||||| Sbjct: 139944 aggggcaaagggattgat--cgagaaaaatctcttgctcttattataagatcatgatttg 140001 Query: 352 atccgcatatgtttggt-aaaagaacaatcttctcctttaatcat-atcataaatggaaa 409 |||| |||||||||||| |||| || ||||||||||||| ||||| ||| ||| ||||| Sbjct: 140002 atccacatatgtttggtaaaaataaaaatcttctcctttgatcataatccaaaacggaaa 140061 Query: 410 gtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 |||||||||| |||||||||||||||||| ||||||||||||||| ||||| Sbjct: 140062 gtgttcaattggaacatgaaaacgtgactgaattggtcttagttactcttc 140112 Score = 202 bits (102), Expect = 7e-49 Identities = 203/231 (87%), Gaps = 8/231 (3%) Strand = Plus / Minus Query: 236 cccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctcaaagaatg 295 ||||||||||||||||| |||| |||||||||||||||| ||| ||||||| ||||||| Sbjct: 98087 cccagattccaaatgaacaaattcaaactcgaaaaggatctttcggattctcgaagaatg 98028 Query: 296 aggggcaaggggattgataccgagaaagatttct---tcttattataaga-cgtgatttg 351 |||||||| ||||||||| ||||||| || ||| ||||||||||||| | ||||||| Sbjct: 98027 aggggcaaagggattgat--cgagaaaaatctcttgctcttattataagatcatgatttg 97970 Query: 352 atccgcatatgtttggt-aaaagaacaatcttctcctttaatcat-atcataaatggaaa 409 |||| |||||||||||| |||| || ||||||||||||| ||||| ||| ||| ||||| Sbjct: 97969 atccacatatgtttggtaaaaataaaaatcttctcctttgatcataatccaaaacggaaa 97910 Query: 410 gtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 |||||||||| |||||||||||||||||| ||||||||||||||| ||||| Sbjct: 97909 gtgttcaattggaacatgaaaacgtgactgaattggtcttagttactcttc 97859 Score = 133 bits (67), Expect = 6e-28 Identities = 152/179 (84%), Gaps = 11/179 (6%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaat----tttggatccaattcgggatt 60 ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 139509 taaccgcatgg-ataagctcacactaacccgtcaatgaattttggatccaattcgggatt 139567 Query: 61 tttctt------gggaagtttcgggaagaaattggaatggaataatatagattcatacag 114 || || |||| || |||||||| | ||||||||||||||||| ||||||||||| Sbjct: 139568 ttcattttcctcgggaggtatcgggaaggagttggaatggaataatatcgattcatacag 139627 Query: 115 aggaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | |||| || ||||||||||| ||||||||||||||| ||||||| ||| |||||||| Sbjct: 139628 aagaaagggctctctattgattcaaacgctgtacctatgggataggtataaaggaagag 139686 Score = 133 bits (67), Expect = 6e-28 Identities = 152/179 (84%), Gaps = 11/179 (6%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaat----tttggatccaattcgggatt 60 ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 98462 taaccgcatgg-ataagctcacactaacccgtcaatgaattttggatccaattcgggatt 98404 Query: 61 tttctt------gggaagtttcgggaagaaattggaatggaataatatagattcatacag 114 || || |||| || |||||||| | ||||||||||||||||| ||||||||||| Sbjct: 98403 ttcattttcctcgggaggtatcgggaaggagttggaatggaataatatcgattcatacag 98344 Query: 115 aggaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 | |||| || ||||||||||| ||||||||||||||| ||||||| ||| |||||||| Sbjct: 98343 aagaaagggctctctattgattcaaacgctgtacctatgggataggtataaaggaagag 98285
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 186 bits (94), Expect = 4e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||| | Sbjct: 147464 taaccgcatgg-ataagctcacactaacccgtcaatttgggattcaattcgggattttcc 147522 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| | |||||||| |||||||||| |||||||| |||||||||||| |||||||| Sbjct: 147523 ttgggagatatcgggaaggaattggaatgtaataatatcgattcatacagaagaaaaggt 147582 Query: 125 tctctattgatgcaaacgctgtacctagaggatagggatagaggaa 170 | ||||||||| ||||||||||||| | ||||||||||||||||| Sbjct: 147583 tatctattgattcaaacgctgtacccatgggatagggatagaggaa 147628 Score = 186 bits (94), Expect = 4e-44 Identities = 149/166 (89%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||| | Sbjct: 106193 taaccgcatgg-ataagctcacactaacccgtcaatttgggattcaattcgggattttcc 106135 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| | |||||||| |||||||||| |||||||| |||||||||||| |||||||| Sbjct: 106134 ttgggagatatcgggaaggaattggaatgtaataatatcgattcatacagaagaaaaggt 106075 Query: 125 tctctattgatgcaaacgctgtacctagaggatagggatagaggaa 170 | ||||||||| ||||||||||||| | ||||||||||||||||| Sbjct: 106074 tatctattgattcaaacgctgtacccatgggatagggatagaggaa 106029 Score = 123 bits (62), Expect = 5e-25 Identities = 103/114 (90%), Gaps = 2/114 (1%) Strand = Plus / Plus Query: 343 cgtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tcat 400 ||||||| ||||||||| |||||||||||| ||| ||||||||||||| |||||| ||| Sbjct: 147870 cgtgattggatccgcatctgtttggtaaaaagaagaatcttctcctttgatcataatcaa 147929 Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagtta 454 ||||||||||||||||||| ||||||||||||| |||| |||||||| |||||| Sbjct: 147930 aaatggaaagtgttcaattggaacatgaaaacgcgactgaattggtcctagtta 147983 Score = 123 bits (62), Expect = 5e-25 Identities = 103/114 (90%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 343 cgtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tcat 400 ||||||| ||||||||| |||||||||||| ||| ||||||||||||| |||||| ||| Sbjct: 105787 cgtgattggatccgcatctgtttggtaaaaagaagaatcttctcctttgatcataatcaa 105728 Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagtta 454 ||||||||||||||||||| ||||||||||||| |||| |||||||| |||||| Sbjct: 105727 aaatggaaagtgttcaattggaacatgaaaacgcgactgaattggtcctagtta 105674
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 182 bits (92), Expect = 7e-43 Identities = 155/175 (88%), Gaps = 7/175 (4%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||| | Sbjct: 145526 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccacttcgggattttcc 145584 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 |||||| || |||||||| |||||||||| |||||||| ||||| ||||||| || Sbjct: 145585 ttgggaggtatcgggaaggaattggaatgtaataatatcgattcatacagatacagaaga 145644 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 145645 aaaggttctctattgattcaaacgctgtacctatgggatagggatagaggaagag 145699 Score = 182 bits (92), Expect = 7e-43 Identities = 155/175 (88%), Gaps = 7/175 (4%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||| | Sbjct: 104534 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccacttcgggattttcc 104476 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 |||||| || |||||||| |||||||||| |||||||| ||||| ||||||| || Sbjct: 104475 ttgggaggtatcgggaaggaattggaatgtaataatatcgattcatacagatacagaaga 104416 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 104415 aaaggttctctattgattcaaacgctgtacctatgggatagggatagaggaagag 104361 Score = 135 bits (68), Expect = 1e-28 Identities = 203/244 (83%), Gaps = 23/244 (9%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| |||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 145895 tagaagaacccagattccaaatgagcaaattcaaacttgaaaaggatctttctgattctc 145954 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagatttctt---cttattataaga-c 343 |||||| ||||||||| |||||||||| |||| |||||||||||| | Sbjct: 145955 ----------gggcaaagggattgat--cgagaaagatctcttgttcttattataagatc 146002 Query: 344 gtgatttgatccgcatatgtttggt-aaaagaacaatcttctcctttaat-----cat-a 396 ||||||||||||||||||||||||| ||||||| ||||||||||||| || || | Sbjct: 146003 gtgatttgatccgcatatgtttggtaaaaagaataatcttctcctttgatttgagaataa 146062 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 ||| |||| |||||||||||||| |||||||||||||||||| |||||||| |||||| | Sbjct: 146063 tcaaaaatcgaaagtgttcaattggaacatgaaaacgtgactgaattggtcctagttact 146122 Query: 457 cttc 460 |||| Sbjct: 146123 cttc 146126 Score = 135 bits (68), Expect = 1e-28 Identities = 203/244 (83%), Gaps = 23/244 (9%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| |||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 104165 tagaagaacccagattccaaatgagcaaattcaaacttgaaaaggatctttctgattctc 104106 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagatttctt---cttattataaga-c 343 |||||| ||||||||| |||||||||| |||| |||||||||||| | Sbjct: 104105 ----------gggcaaagggattgat--cgagaaagatctcttgttcttattataagatc 104058 Query: 344 gtgatttgatccgcatatgtttggt-aaaagaacaatcttctcctttaat-----cat-a 396 ||||||||||||||||||||||||| ||||||| ||||||||||||| || || | Sbjct: 104057 gtgatttgatccgcatatgtttggtaaaaagaataatcttctcctttgatttgagaataa 103998 Query: 397 tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagt 456 ||| |||| |||||||||||||| |||||||||||||||||| |||||||| |||||| | Sbjct: 103997 tcaaaaatcgaaagtgttcaattggaacatgaaaacgtgactgaattggtcctagttact 103938 Query: 457 cttc 460 |||| Sbjct: 103937 cttc 103934
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 182 bits (92), Expect = 7e-43 Identities = 151/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 141711 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 141769 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 141770 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 141829 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 141830 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 141877 Score = 182 bits (92), Expect = 7e-43 Identities = 151/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 101846 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 101788 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 101787 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 101728 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 101727 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 101680 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 142042 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 142101 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 142102 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 142159 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 142160 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 142219 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 142220 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 142279 Query: 458 ttc 460 ||| Sbjct: 142280 ttc 142282 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 101515 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 101456 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 101455 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 101398 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 101397 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 101338 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 101337 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 101278 Query: 458 ttc 460 ||| Sbjct: 101277 ttc 101275
>gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete sequence; 16S ribosomal RNA gene, complete sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 5206 Score = 182 bits (92), Expect = 7e-43 Identities = 151/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || |||||||| Sbjct: 429 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagggattttc 371 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 370 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 311 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 310 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 263 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 98 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 39 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 38 gaagaatgaggggcaaagggattgat 13
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 178 bits (90), Expect = 1e-41 Identities = 206/240 (85%), Gaps = 11/240 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 145299 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 145358 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-- 342 ||||||||||||||| ||||||||| |||||||||| || |||||||||||||| Sbjct: 145359 gaagaatgaggggcaaagggattgat--cgagaaagatctcttgttcttattataagatc 145416 Query: 343 -cgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcat-atcat 400 |||||| |||||||| |||||||||||| || ||||||||| ||| | || |||| Sbjct: 145417 gtgtgattggatccgcagatgtttggtaaa--aaaaatcttctcttttgagaataatcaa 145474 Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||||||| |||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 145475 aaatggaaagtgttcaattggaacatgaaaacgtgactgaatttgtcctagttactcttc 145534 Score = 178 bits (90), Expect = 1e-41 Identities = 152/170 (89%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 144916 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcgggattttcc 144974 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcataca-gaggaaaagg 123 ||||| || || | ||| |||||||||| |||||||| |||||||| | |||||||||| Sbjct: 144975 ttggggggtatcagtaaggaattggaatgtaataatattgattcatataggaggaaaagg 145034 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||| |||| |||||||||| |||||||||||||| ||||| Sbjct: 145035 ttctctattgattcaaatgctgtacctatgggatagggatagagaaagag 145084 Score = 178 bits (90), Expect = 1e-41 Identities = 152/170 (89%), Gaps = 2/170 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 104181 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcgggattttcc 104123 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcataca-gaggaaaagg 123 ||||| || || | ||| |||||||||| |||||||| |||||||| | |||||||||| Sbjct: 104122 ttggggggtatcagtaaggaattggaatgtaataatattgattcatataggaggaaaagg 104063 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||||||||||| |||| |||||||||| |||||||||||||| ||||| Sbjct: 104062 ttctctattgattcaaatgctgtacctatgggatagggatagagaaagag 104013 Score = 178 bits (90), Expect = 1e-41 Identities = 206/240 (85%), Gaps = 11/240 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 103798 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 103739 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-- 342 ||||||||||||||| ||||||||| |||||||||| || |||||||||||||| Sbjct: 103738 gaagaatgaggggcaaagggattgat--cgagaaagatctcttgttcttattataagatc 103681 Query: 343 -cgtgatttgatccgcatatgtttggtaaaagaacaatcttctcctttaatcat-atcat 400 |||||| |||||||| |||||||||||| || ||||||||| ||| | || |||| Sbjct: 103680 gtgtgattggatccgcagatgtttggtaaa--aaaaatcttctcttttgagaataatcaa 103623 Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||||||| |||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 103622 aaatggaaagtgttcaattggaacatgaaaacgtgactgaatttgtcctagttactcttc 103563
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 178 bits (90), Expect = 1e-41 Identities = 206/239 (86%), Gaps = 8/239 (3%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| |||||||| |||||||| |||| ||||| |||||||||| |||| |||||| Sbjct: 145400 tagaagaacccagatttcaaatgaacaaattcaaacttgaaaaggatctttctaattctc 145459 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||| ||||||| |||||||||| || |||||||||||||| Sbjct: 145460 gaagaatgaggggcaaggagattgat--cgagaaagatctcttgttcttattataagatt 145517 Query: 344 gtgatttgatccgcatatgtttggt-aaaagaacaatcttctcctttaatcat-atcata 401 |||||| |||||||| ||||||||| ||||||| ||||||||||||| | || ||| | Sbjct: 145518 gtgattggatccgcagatgtttggtaaaaagaagaatcttctcctttgagaataatccaa 145577 Query: 402 aatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 |||||||||||||||||| |||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 145578 aatggaaagtgttcaattggaacatgaaaacgtaactgaattggtcctagttactcttc 145636 Score = 178 bits (90), Expect = 1e-41 Identities = 206/239 (86%), Gaps = 8/239 (3%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| |||||||| |||||||| |||| ||||| |||||||||| |||| |||||| Sbjct: 103899 tagaagaacccagatttcaaatgaacaaattcaaacttgaaaaggatctttctaattctc 103840 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||| ||||||| |||||||||| || |||||||||||||| Sbjct: 103839 gaagaatgaggggcaaggagattgat--cgagaaagatctcttgttcttattataagatt 103782 Query: 344 gtgatttgatccgcatatgtttggt-aaaagaacaatcttctcctttaatcat-atcata 401 |||||| |||||||| ||||||||| ||||||| ||||||||||||| | || ||| | Sbjct: 103781 gtgattggatccgcagatgtttggtaaaaagaagaatcttctcctttgagaataatccaa 103722 Query: 402 aatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 |||||||||||||||||| |||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 103721 aatggaaagtgttcaattggaacatgaaaacgtaactgaattggtcctagttactcttc 103663 Score = 167 bits (84), Expect = 4e-38 Identities = 153/175 (87%), Gaps = 7/175 (4%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| | Sbjct: 145013 taaccgcatgg-ataagctcacactaacccgtcaatttggaatccaattcgggattttcc 145071 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 |||||| || |||||||| ||||||||||||||||||| ||||| ||||||| || Sbjct: 145072 ttgggaggtatcgggaaggaattggaatggaataatatcgattcatacagatacagaaga 145131 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 || |||||||||||||| |||| |||||||||| |||||||||||||| ||||| Sbjct: 145132 aagggttctctattgattcaaaggctgtacctatgggatagggatagagaaagag 145186 Score = 167 bits (84), Expect = 4e-38 Identities = 153/175 (87%), Gaps = 7/175 (4%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| | Sbjct: 104286 taaccgcatgg-ataagctcacactaacccgtcaatttggaatccaattcgggattttcc 104228 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 |||||| || |||||||| ||||||||||||||||||| ||||| ||||||| || Sbjct: 104227 ttgggaggtatcgggaaggaattggaatggaataatatcgattcatacagatacagaaga 104168 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 || |||||||||||||| |||| |||||||||| |||||||||||||| ||||| Sbjct: 104167 aagggttctctattgattcaaaggctgtacctatgggatagggatagagaaagag 104113
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 176 bits (89), Expect = 4e-41 Identities = 152/171 (88%), Gaps = 4/171 (2%) Strand = Plus / Plus Query: 6 aaccgcatggtataagctcacattaacccgtcaattttggatc---caattcgggatttt 62 |||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||| Sbjct: 136925 aaccgcatgg-ataagctcacactaacccgtcaatttgggatgatacaattcgggatttt 136983 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 ||||||| || |||| ||| |||||||||| |||||||| ||||||| |||| |||||| Sbjct: 136984 ccttgggaggtatcggaaaggaattggaatgtaataatatcgattcatgcagaagaaaag 137043 Query: 123 gttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 137044 gttctctattgattcaaacgctgtacctatgggatagggatagaggaagag 137094 Score = 176 bits (89), Expect = 4e-41 Identities = 152/171 (88%), Gaps = 4/171 (2%) Strand = Plus / Minus Query: 6 aaccgcatggtataagctcacattaacccgtcaattttggatc---caattcgggatttt 62 |||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||| Sbjct: 96520 aaccgcatgg-ataagctcacactaacccgtcaatttgggatgatacaattcgggatttt 96462 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 ||||||| || |||| ||| |||||||||| |||||||| ||||||| |||| |||||| Sbjct: 96461 ccttgggaggtatcggaaaggaattggaatgtaataatatcgattcatgcagaagaaaag 96402 Query: 123 gttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 96401 gttctctattgattcaaacgctgtacctatgggatagggatagaggaagag 96351
>emb|X04491.1|CHSORG Spinach chloroplast DNA homologous to ARS and ARC elements upstream of rDNA operon Length = 1034 Score = 176 bits (89), Expect = 4e-41 Identities = 152/171 (88%), Gaps = 4/171 (2%) Strand = Plus / Minus Query: 6 aaccgcatggtataagctcacattaacccgtcaattttggatc---caattcgggatttt 62 |||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||| Sbjct: 312 aaccgcatgg-ataagctcacactaacccgtcaatttgggatgatacaattcgggatttt 254 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 ||||||| || |||| ||| |||||||||| |||||||| ||||||| |||| |||||| Sbjct: 253 ccttgggaggtatcggaaaggaattggaatgtaataatatcgattcatgcagaagaaaag 194 Query: 123 gttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 193 gttctctattgattcaaacgctgtacctatgggatagggatagaggaagag 143
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 140432 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 140490 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 140491 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 140550 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 140551 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 140598 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 100604 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 100546 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 100545 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 100486 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 100485 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 100438 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 140763 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 140822 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 140823 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 140880 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 140881 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 140940 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 140941 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141000 Query: 458 ttc 460 ||| Sbjct: 141001 ttc 141003 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 100273 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 100214 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 100213 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 100156 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 100155 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 100096 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 100095 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 100036 Query: 458 ttc 460 ||| Sbjct: 100035 ttc 100033
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 140588 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 140646 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 140647 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 140706 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 140707 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 140754 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 100755 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 100697 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 100696 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 100637 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 100636 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 100589 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 140919 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 140978 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 140979 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 141036 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 141037 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 141096 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 141097 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141156 Query: 458 ttc 460 ||| Sbjct: 141157 ttc 141159 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 100424 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 100365 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 100364 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 100307 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 100306 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 100247 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 100246 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 100187 Query: 458 ttc 460 ||| Sbjct: 100186 ttc 100184
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 140586 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 140644 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 140645 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 140704 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 140705 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 140752 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 100752 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 100694 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 100693 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 100634 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 100633 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 100586 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 140917 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 140976 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 140977 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 141034 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 141035 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 141094 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 141095 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141154 Query: 458 ttc 460 ||| Sbjct: 141155 ttc 141157 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 100421 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 100362 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 100361 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 100304 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 100303 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 100244 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 100243 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 100184 Query: 458 ttc 460 ||| Sbjct: 100183 ttc 100181
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 140477 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 140535 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 140536 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 140595 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 140596 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 140643 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 100651 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 100593 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 100592 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 100533 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 100532 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 100485 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 140808 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 140867 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 140868 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 140925 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 140926 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 140985 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 140986 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141045 Query: 458 ttc 460 ||| Sbjct: 141046 ttc 141048 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 100320 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 100261 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 100260 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 100203 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 100202 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 100143 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 100142 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 100083 Query: 458 ttc 460 ||| Sbjct: 100082 ttc 100080
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 140446 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 140504 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 140505 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 140564 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 140565 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 140612 Score = 174 bits (88), Expect = 2e-40 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 100616 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 100558 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 100557 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 100498 Query: 124 ttctctattgatgcaaacgctgtacctagaggatagggatagaggaag 171 |||||||||||| ||||| ||||||||| |||||||||| ||||||| Sbjct: 100497 ttctctattgattcaaacactgtacctatgggatagggatcgaggaag 100450 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 140777 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 140836 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 140837 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 140894 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 140895 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 140954 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 140955 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141014 Query: 458 ttc 460 ||| Sbjct: 141015 ttc 141017 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 100285 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 100226 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 100225 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 100168 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 100167 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 100108 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 100107 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 100048 Query: 458 ttc 460 ||| Sbjct: 100047 ttc 100045
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 172 bits (87), Expect = 6e-40 Identities = 133/147 (90%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| | Sbjct: 139601 taaccgcatgg-ataagctcacaccaacccgtcaatttgggatccaattcgggattttcc 139659 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || |||| ||| |||||||||| |||||||| |||||||||||| |||||||| Sbjct: 139660 ttgggaggtatcggaaaggaattggaatgtaataatatcgattcatacagaagaaaaggt 139719 Query: 125 tctctattgatgcaaacgctgtaccta 151 | ||||||||| ||||||||||||||| Sbjct: 139720 tatctattgattcaaacgctgtaccta 139746 Score = 172 bits (87), Expect = 6e-40 Identities = 133/147 (90%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| | Sbjct: 100681 taaccgcatgg-ataagctcacaccaacccgtcaatttgggatccaattcgggattttcc 100623 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || |||| ||| |||||||||| |||||||| |||||||||||| |||||||| Sbjct: 100622 ttgggaggtatcggaaaggaattggaatgtaataatatcgattcatacagaagaaaaggt 100563 Query: 125 tctctattgatgcaaacgctgtaccta 151 | ||||||||| ||||||||||||||| Sbjct: 100562 tatctattgattcaaacgctgtaccta 100536 Score = 145 bits (73), Expect = 1e-31 Identities = 212/249 (85%), Gaps = 22/249 (8%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| ||| |||||| ||||||||| ||||||||||| Sbjct: 139959 tagaagaacccagattccaaatgaacaaaa--aaactcaaaaaggatctttctgattctc 140016 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagatttcttctt--------attata 339 ||||||||||| ||| ||||||||| |||||||||| |||| || |||||| Sbjct: 140017 gaagaatgaggg-caaagggattgat--cgagaaagatctcttgttcttattatattata 140073 Query: 340 aga-cgtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata- 396 ||| |||||||| |||||||||| |||||||||| ||| ||||||||||||| |||||| Sbjct: 140074 agatcgtgattttatccgcatat-tttggtaaaaagaataatcttctcctttgatcataa 140132 Query: 397 tc----ataaa-tggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttag 451 || ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 140133 tccaaaataaaatggaaagtgttcaattagaacatgaaaacgtgactgaattggtcctag 140192 Query: 452 ttagtcttc 460 ||| ||||| Sbjct: 140193 ttactcttc 140201 Score = 145 bits (73), Expect = 1e-31 Identities = 212/249 (85%), Gaps = 22/249 (8%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| ||| |||||| ||||||||| ||||||||||| Sbjct: 100323 tagaagaacccagattccaaatgaacaaaa--aaactcaaaaaggatctttctgattctc 100266 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagatttcttctt--------attata 339 ||||||||||| ||| ||||||||| |||||||||| |||| || |||||| Sbjct: 100265 gaagaatgaggg-caaagggattgat--cgagaaagatctcttgttcttattatattata 100209 Query: 340 aga-cgtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata- 396 ||| |||||||| |||||||||| |||||||||| ||| ||||||||||||| |||||| Sbjct: 100208 agatcgtgattttatccgcatat-tttggtaaaaagaataatcttctcctttgatcataa 100150 Query: 397 tc----ataaa-tggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttag 451 || ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 100149 tccaaaataaaatggaaagtgttcaattagaacatgaaaacgtgactgaattggtcctag 100090 Query: 452 ttagtcttc 460 ||| ||||| Sbjct: 100089 ttactcttc 100081
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 172 bits (87), Expect = 6e-40 Identities = 121/131 (92%), Gaps = 1/131 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 141880 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgagattttcc 141938 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || |||||||| ||||||||||||||||||| |||||||||||| |||||||| Sbjct: 141939 ttgggaggtatcgggaaggaattggaatggaataatatcgattcatacagaagaaaaggt 141998 Query: 125 tctctattgat 135 ||||||||||| Sbjct: 141999 tctctattgat 142009 Score = 172 bits (87), Expect = 6e-40 Identities = 121/131 (92%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 100545 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgagattttcc 100487 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || |||||||| ||||||||||||||||||| |||||||||||| |||||||| Sbjct: 100486 ttgggaggtatcgggaaggaattggaatggaataatatcgattcatacagaagaaaaggt 100427 Query: 125 tctctattgat 135 ||||||||||| Sbjct: 100426 tctctattgat 100416 Score = 141 bits (71), Expect = 2e-30 Identities = 147/168 (87%), Gaps = 7/168 (4%) Strand = Plus / Plus Query: 227 atagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattct 286 |||||||| ||||||| ||||||||| |||| ||||| |||||||||| |||| ||||| Sbjct: 142227 atagaagaacccagatcccaaatgaacaaattcaaacttgaaaaggatctttctcattct 142286 Query: 287 caaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga- 342 | ||||||||||||||| ||||||||| |||||||||| || |||||||||||||| Sbjct: 142287 cgaagaatgaggggcaaagggattgat--cgagaaagatctcttgttcttattataagat 142344 Query: 343 cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctccttt 389 ||||||| ||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 142345 cgtgattggatacgcatatgtttggtaaagagaataatcttctccttt 142392 Score = 141 bits (71), Expect = 2e-30 Identities = 147/168 (87%), Gaps = 7/168 (4%) Strand = Plus / Minus Query: 227 atagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattct 286 |||||||| ||||||| ||||||||| |||| ||||| |||||||||| |||| ||||| Sbjct: 100198 atagaagaacccagatcccaaatgaacaaattcaaacttgaaaaggatctttctcattct 100139 Query: 287 caaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga- 342 | ||||||||||||||| ||||||||| |||||||||| || |||||||||||||| Sbjct: 100138 cgaagaatgaggggcaaagggattgat--cgagaaagatctcttgttcttattataagat 100081 Query: 343 cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctccttt 389 ||||||| ||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 100080 cgtgattggatacgcatatgtttggtaaagagaataatcttctccttt 100033 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 142411 aaatggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactcttc 142470 Score = 87.7 bits (44), Expect = 3e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 100014 aaatggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactcttc 99955
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 141051 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 141109 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 141110 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 141169 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 141170 ttctctattgattcaaacactgtaccta 141197 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 101579 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 101521 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 101520 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 101461 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 101460 ttctctattgattcaaacactgtaccta 101433 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 141387 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 141446 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 141447 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 141504 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 141505 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 141564 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 141565 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141624 Query: 458 ttc 460 ||| Sbjct: 141625 ttc 141627 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 101243 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 101184 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 101183 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 101126 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 101125 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 101066 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 101065 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 101006 Query: 458 ttc 460 ||| Sbjct: 101005 ttc 101003
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 433 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 375 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 374 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 315 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 314 ttctctattgattcaaacactgtaccta 287 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 97 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 38 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 37 gaagaatgaggggcaaagggattgat 12
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 141049 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 141107 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 141108 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 141167 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 141168 ttctctattgattcaaacactgtaccta 141195 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 101577 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 101519 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 101518 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 101459 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 101458 ttctctattgattcaaacactgtaccta 101431 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 141385 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 141444 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 141445 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 141502 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 141503 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 141562 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 141563 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141622 Query: 458 ttc 460 ||| Sbjct: 141623 ttc 141625 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 101241 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 101182 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 101181 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 101124 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 101123 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 101064 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 101063 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 101004 Query: 458 ttc 460 ||| Sbjct: 101003 ttc 101001
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 3694 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 3752 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 3753 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 3812 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 3813 ttctctattgattcaaacactgtaccta 3840 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 4030 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 4089 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 4090 gaagaatgaggggcaaagggattgat 4115
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 3694 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 3752 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 3753 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 3812 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 3813 ttctctattgattcaaacactgtaccta 3840 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 4030 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 4089 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 4090 gaagaatgaggggcaaagggattgat 4115
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 3742 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 3800 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 3801 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 3860 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 3861 ttctctattgattcaaacactgtaccta 3888 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 4078 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 4137 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 4138 gaagaatgaggggcaaagggattgat 4163
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 3742 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 3800 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 3801 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 3860 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 3861 ttctctattgattcaaacactgtaccta 3888 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 4078 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 4137 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 4138 gaagaatgaggggcaaagggattgat 4163
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 2587 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 2645 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 2646 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 2705 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 2706 ttctctattgattcaaacactgtaccta 2733 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 2923 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 2982 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 2983 gaagaatgaggggcaaagggattgat 3008
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 2587 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 2645 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 2646 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 2705 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 2706 ttctctattgattcaaacactgtaccta 2733 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 2923 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 2982 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 2983 gaagaatgaggggcaaagggattgat 3008
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 167 bits (84), Expect = 4e-38 Identities = 134/148 (90%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 2530 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 2588 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 2589 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 2648 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 2649 ttctctattgattcaaacactgtaccta 2676 Score = 83.8 bits (42), Expect = 5e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 2866 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 2925 Query: 288 aaagaatgaggggcaaggggattgat 313 ||||||||||||||| ||||||||| Sbjct: 2926 gaagaatgaggggcaaagggattgat 2951
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 165 bits (83), Expect = 2e-37 Identities = 132/147 (89%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 2788 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgagattttcc 2730 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| || || |||||||| ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 2729 ttgagaggtatcgggaaggaattggaatggaataatatcgattcagacagaagaaaaggt 2670 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 2669 tctcgattgattcaaacactgtaccta 2643 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 2460 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 2401 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 2400 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 2343 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 2342 gtgattggatccgcatatgtttggtaaa 2315 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 396 atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttag 455 |||| ||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 2307 atcaaaaacggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttac 2248 Query: 456 tcttc 460 ||||| Sbjct: 2247 tcttc 2243
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 165 bits (83), Expect = 2e-37 Identities = 132/147 (89%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 138095 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgagattttcc 138153 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| || || |||||||| ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 138154 ttgagaggtatcgggaaggaattggaatggaataatatcgattcagacagaagaaaaggt 138213 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 138214 tctcgattgattcaaacactgtaccta 138240 Score = 165 bits (83), Expect = 2e-37 Identities = 132/147 (89%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 98783 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgagattttcc 98725 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| || || |||||||| ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 98724 ttgagaggtatcgggaaggaattggaatggaataatatcgattcagacagaagaaaaggt 98665 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 98664 tctcgattgattcaaacactgtaccta 98638 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 138469 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 138528 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 138529 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 138586 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 138587 gtgattggatccgcatatgtttggtaaa 138614 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 98409 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 98350 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 98349 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 98292 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 98291 gtgattggatccgcatatgtttggtaaa 98264 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 396 atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttag 455 |||| ||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 138622 atcaaaaacggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttac 138681 Query: 456 tcttc 460 ||||| Sbjct: 138682 tcttc 138686 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 396 atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttag 455 |||| ||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 98256 atcaaaaacggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttac 98197 Query: 456 tcttc 460 ||||| Sbjct: 98196 tcttc 98192
>gb|AY177624.1| Lactuca sativa ribosomal protein S7 (rps7) and ribosomal protein S12 (rps12) genes, partial cds; hypothetical protein gene, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 3229 Score = 165 bits (83), Expect = 2e-37 Identities = 132/147 (89%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 1789 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgagattttcc 1731 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| || || |||||||| ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 1730 ttgagaggtatcgggaaggaattggaatggaataatatcgattcagacagaagaaaaggt 1671 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 1670 tctcgattgattcaaacactgtaccta 1644 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 1415 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 1356 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 1355 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 1298 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 1297 gtgattggatccgcatatgtttggtaaa 1270 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 396 atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttag 455 |||| ||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 1262 atcaaaaacggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttac 1203 Query: 456 tcttc 460 ||||| Sbjct: 1202 tcttc 1198
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 165 bits (83), Expect = 2e-37 Identities = 132/147 (89%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 138088 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgagattttcc 138146 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| || || |||||||| ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 138147 ttgagaggtatcgggaaggaattggaatggaataatatcgattcagacagaagaaaaggt 138206 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 138207 tctcgattgattcaaacactgtaccta 138233 Score = 165 bits (83), Expect = 2e-37 Identities = 132/147 (89%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| |||||| | Sbjct: 98781 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgagattttcc 98723 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| || || |||||||| ||||||||||||||||||| |||||| ||||| |||||||| Sbjct: 98722 ttgagaggtatcgggaaggaattggaatggaataatatcgattcagacagaagaaaaggt 98663 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 98662 tctcgattgattcaaacactgtaccta 98636 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 138462 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 138521 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 138522 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 138579 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 138580 gtgattggatccgcatatgtttggtaaa 138607 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 98407 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 98348 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 98347 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 98290 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 98289 gtgattggatccgcatatgtttggtaaa 98262 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 396 atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttag 455 |||| ||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 138615 atcaaaaacggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttac 138674 Query: 456 tcttc 460 ||||| Sbjct: 138675 tcttc 138679 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 396 atcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttag 455 |||| ||| ||||||||||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 98254 atcaaaaacggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttac 98195 Query: 456 tcttc 460 ||||| Sbjct: 98194 tcttc 98190
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 163 bits (82), Expect = 6e-37 Identities = 147/165 (89%), Gaps = 4/165 (2%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| | Sbjct: 148452 taaccgcatgg-ataagctcacactaacccgtcaatttggaatccaattcgggattttcc 148510 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || |||||||| ||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 148511 ttgggaggtatcgggaaggaattggaatggaa-aatatcgattcatacagaagaaaaggt 148569 Query: 125 tctctattgatgcaaacg--ctgtacctagaggatagggatagag 167 ||||||||||| |||| | |||||| || |||||||||||||| Sbjct: 148570 tctctattgattcaaaaggcctgtacttatgggatagggatagag 148614 Score = 163 bits (82), Expect = 6e-37 Identities = 147/165 (89%), Gaps = 4/165 (2%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| | ||||||||||||||||| | Sbjct: 104876 taaccgcatgg-ataagctcacactaacccgtcaatttggaatccaattcgggattttcc 104818 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || |||||||| ||||||||||||| ||||| |||||||||||| |||||||| Sbjct: 104817 ttgggaggtatcgggaaggaattggaatggaa-aatatcgattcatacagaagaaaaggt 104759 Query: 125 tctctattgatgcaaacg--ctgtacctagaggatagggatagag 167 ||||||||||| |||| | |||||| || |||||||||||||| Sbjct: 104758 tctctattgattcaaaaggcctgtacttatgggatagggatagag 104714 Score = 155 bits (78), Expect = 2e-34 Identities = 204/239 (85%), Gaps = 9/239 (3%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| |||||||| |||||||| |||| ||||| ||||||| || |||| |||||| Sbjct: 148811 tagaagaacccagatttcaaatgaacaaattcaaacttgaaaaggttctttctaattctc 148870 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||| ||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 148871 gaagaatgagggacaaggggattgat--cgagaaagatctcttgttcttattataagatc 148928 Query: 344 gtgatttgatccgcatatgtttggt-aaaagaacaatcttctcctttaatcat-atcata 401 ||| || |||||||| ||||||||| ||||||| ||||||||||||| | || |||| | Sbjct: 148929 gtggttggatccgcagatgtttggtaaaaagaagaatcttctcctttgagaataatcaaa 148988 Query: 402 aatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||| || | |||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 148989 aatggaaagtgtttaa-tggaacatgaaaacgtaactgaattggtcctagttactcttc 149046 Score = 155 bits (78), Expect = 2e-34 Identities = 204/239 (85%), Gaps = 9/239 (3%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| |||||||| |||||||| |||| ||||| ||||||| || |||| |||||| Sbjct: 104517 tagaagaacccagatttcaaatgaacaaattcaaacttgaaaaggttctttctaattctc 104458 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||| ||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 104457 gaagaatgagggacaaggggattgat--cgagaaagatctcttgttcttattataagatc 104400 Query: 344 gtgatttgatccgcatatgtttggt-aaaagaacaatcttctcctttaatcat-atcata 401 ||| || |||||||| ||||||||| ||||||| ||||||||||||| | || |||| | Sbjct: 104399 gtggttggatccgcagatgtttggtaaaaagaagaatcttctcctttgagaataatcaaa 104340 Query: 402 aatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||| || | |||||||||||||| ||| |||||||| |||||| ||||| Sbjct: 104339 aatggaaagtgtttaa-tggaacatgaaaacgtaactgaattggtcctagttactcttc 104282
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 5110 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 5169 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 5170 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 5227 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 5228 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 5287 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 5288 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 5347 Query: 458 ttc 460 ||| Sbjct: 5348 ttc 5350 Score = 159 bits (80), Expect = 1e-35 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| || | |||||| Sbjct: 4783 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattagagattttc 4841 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | ||||||||||||||||| |||||||||||| ||||||| Sbjct: 4842 cttgggaggtatcgggaaggatttggaatggaataatatcgattcatacagaagaaaagg 4901 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 4902 ttctctattgattcaaacactgtaccta 4929
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 141122 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 141181 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 141182 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 141239 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 141240 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 141299 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 141300 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 141359 Query: 458 ttc 460 ||| Sbjct: 141360 ttc 141362 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 101016 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 100957 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 100956 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 100899 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 100898 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 100839 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 100838 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 100779 Query: 458 ttc 460 ||| Sbjct: 100778 ttc 100776 Score = 159 bits (80), Expect = 1e-35 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 140786 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 140844 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | || |||||||||||||| |||||||||||| ||||||| Sbjct: 140845 cttgggaggtatcgggaaggattttgaatggaataatatcgattcatacagaagaaaagg 140904 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 140905 ttctctattgattcaaacactgtaccta 140932 Score = 159 bits (80), Expect = 1e-35 Identities = 133/148 (89%), Gaps = 2/148 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| |||||| Sbjct: 101352 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgagattttc 101294 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaagg 123 ||||||| || |||||||| | || |||||||||||||| |||||||||||| ||||||| Sbjct: 101293 cttgggaggtatcgggaaggattttgaatggaataatatcgattcatacagaagaaaagg 101234 Query: 124 ttctctattgatgcaaacgctgtaccta 151 |||||||||||| ||||| ||||||||| Sbjct: 101233 ttctctattgattcaaacactgtaccta 101206
>emb|X03481.1|CHNTRP12 Nicotiana tabaccum chloroplast gene for putative ribosomal proteins S7 and S12 Length = 1476 Score = 161 bits (81), Expect = 2e-36 Identities = 207/243 (85%), Gaps = 12/243 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| ||||||||||||||||| |||| ||||| |||||||||| | || ||||| Sbjct: 213 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattctt 272 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat------ttcttcttat-tataa 340 ||||||||||||||| ||||||||| | |||||||| |||||||||| ||||| Sbjct: 273 gaagaatgaggggcaaagggattgat--caagaaagatcttttgttcttcttatatataa 330 Query: 341 ga-cgtgatttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-t 397 || ||||||| ||||||||||||||||||||| |||| |||||| |||||| | ||| | Sbjct: 331 gatcgtgattggatccgcatatgtttggtaaagagaataatcttatcctttgagaataat 390 Query: 398 cataaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtc 457 || ||||||| ||||||||||| |||||||||||||||||| |||||||| |||||| || Sbjct: 391 caaaaatggacagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactc 450 Query: 458 ttc 460 ||| Sbjct: 451 ttc 453
>dbj|BA000009.3| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 368801 Score = 159 bits (80), Expect = 1e-35 Identities = 153/175 (87%), Gaps = 8/175 (4%) Strand = Plus / Minus Query: 6 aaccgcatggtataagctcacattaacccgtcaattttg---gatccaattcgggatttt 62 |||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||| Sbjct: 5961 aaccgcatgg-ataagctcacactaacccgtcaatttggaatgatccaattcgggatttt 5903 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 ||||||| || |||| ||| |||||||||| |||||||| ||||||| |||| |||||| Sbjct: 5902 ccttgggaggtatcggaaaggaattggaatgtaataatatcgattcatgcagaagaaaag 5843 Query: 123 gttctctattgatgcaaacgctgtac----ctagaggatagggatagaggaagag 173 ||||||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 5842 gttctctattgattcaaacgctgtacctatctatgggatagggatagaggaagag 5788
>dbj|BA000024.1| Beta vulgaris subsp. vulgaris mitochondrial genomic DNA, complete sequence Length = 501020 Score = 159 bits (80), Expect = 1e-35 Identities = 153/175 (87%), Gaps = 8/175 (4%) Strand = Plus / Plus Query: 6 aaccgcatggtataagctcacattaacccgtcaattttg---gatccaattcgggatttt 62 |||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||| Sbjct: 464005 aaccgcatgg-ataagctcacactaacccgtcaatttggaatgatccaattcgggatttt 464063 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 ||||||| || |||| ||| |||||||||| |||||||| ||||||| |||| |||||| Sbjct: 464064 ccttgggaggtatcggaaaggaattggaatgtaataatatcgattcatgcagaagaaaag 464123 Query: 123 gttctctattgatgcaaacgctgtac----ctagaggatagggatagaggaagag 173 ||||||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 464124 gttctctattgattcaaacgctgtacctatctatgggatagggatagaggaagag 464178
>dbj|AB032426.1| Beta vulgaris chloroplast DNA for 16S rRNA, tRNA-Val, ribosomal protein S12, ribosomal protein S7, NADH dehydrogenase ND2 subunit Length = 4147 Score = 159 bits (80), Expect = 1e-35 Identities = 153/175 (87%), Gaps = 8/175 (4%) Strand = Plus / Plus Query: 6 aaccgcatggtataagctcacattaacccgtcaattttg---gatccaattcgggatttt 62 |||||||||| ||||||||||| |||||||||||||| | |||||||||||||||||| Sbjct: 1523 aaccgcatgg-ataagctcacactaacccgtcaatttggaatgatccaattcgggatttt 1581 Query: 63 tcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaag 122 ||||||| || |||| ||| |||||||||| |||||||| ||||||| |||| |||||| Sbjct: 1582 ccttgggaggtatcggaaaggaattggaatgtaataatatcgattcatgcagaagaaaag 1641 Query: 123 gttctctattgatgcaaacgctgtac----ctagaggatagggatagaggaagag 173 ||||||||||||| |||||||||||| ||| |||||||||||||||||||| Sbjct: 1642 gttctctattgattcaaacgctgtacctatctatgggatagggatagaggaagag 1696
>emb|AJ517467.2|NTA517467 Nicotiana tabacum chloroplast inverse PCR product of 4.9-kb neo-hybridizing nuclear XbaI fragment Length = 2249 Score = 151 bits (76), Expect = 2e-33 Identities = 199/234 (85%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 237 ccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctcaaagaatga 296 |||||||||||||||| |||| ||||| |||||||||| | || ||||| |||||||| Sbjct: 1 ccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattcttgaagaatga 60 Query: 297 ggggcaaggggattgataccgagaaagat------ttcttcttat-tataaga-cgtgat 348 ||||||| ||||||||| | |||||||| |||||||||| ||||||| |||||| Sbjct: 61 ggggcaaagggattgat--caagaaagatcttttgttcttcttatatataagatcgtgat 118 Query: 349 ttgatccgcatatgtttggtaaa-agaacaatcttctcctttaatcata-tcataaatgg 406 | ||||||||||||||||||||| |||| |||||| |||||| | ||| ||| |||||| Sbjct: 119 tggatccgcatatgtttggtaaagagaataatcttatcctttgagaataatcaaaaatgg 178 Query: 407 aaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 | ||||||||||| |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 179 acagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactcttc 232
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 137196 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 137255 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 137256 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 137313 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 137314 gtgattggatccgcatatgtttggtaaa 137341 Score = 149 bits (75), Expect = 9e-33 Identities = 130/147 (88%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||| | Sbjct: 136843 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgatattttcc 136901 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| ||||| |||||||| || |||||||||||||||| |||||| ||||| ||||||| Sbjct: 136902 ttgagaagtatcgggaaggaagtggaatggaataatatcgattcagacagaagaaaaggc 136961 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 136962 tctcgattgattcaaacactgtaccta 136988 Score = 149 bits (75), Expect = 9e-33 Identities = 130/147 (88%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| |||||||||||| ||||| | Sbjct: 97792 taaccgcatgg-ataagctcacactaacccgtcaatttaggatccaattcgatattttcc 97734 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 ||| ||||| |||||||| || |||||||||||||||| |||||| ||||| ||||||| Sbjct: 97733 ttgagaagtatcgggaaggaagtggaatggaataatatcgattcagacagaagaaaaggc 97674 Query: 125 tctctattgatgcaaacgctgtaccta 151 |||| |||||| ||||| ||||||||| Sbjct: 97673 tctcgattgattcaaacactgtaccta 97647 Score = 149 bits (75), Expect = 9e-33 Identities = 132/148 (89%), Gaps = 6/148 (4%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctc 287 ||||||| | ||||||||||||||| |||| ||||| |||||||||| ||||||||||| Sbjct: 97439 tagaagaactcagattccaaatgaacaaattcaaacttgaaaaggatctttctgattctc 97380 Query: 288 aaagaatgaggggcaaggggattgataccgagaaagat---ttcttcttattataaga-c 343 ||||||||||||||||||||||||| |||||||||| || |||||||||||||| | Sbjct: 97379 gaagaatgaggggcaaggggattgat--cgagaaagatctcttgttcttattataagatc 97322 Query: 344 gtgatttgatccgcatatgtttggtaaa 371 |||||| ||||||||||||||||||||| Sbjct: 97321 gtgattggatccgcatatgtttggtaaa 97294 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 405 ggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 137358 ggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactcttc 137413 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 405 ggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 97277 ggaaagtgttcaattggaacatgaaaacgtgactaaattggtcctagttactcttc 97222
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 137 bits (69), Expect = 4e-29 Identities = 132/149 (88%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa-ttcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||||| |||| ||||| Sbjct: 4769 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattcgatattttc 4827 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagattcatacag-aggaaaag 122 ||||||| || |||||||| ||||||||||||||||||| ||||||||||| || ||| | Sbjct: 4828 cttgggaggtatcgggaaggaattggaatggaataatatcgattcatacagaagtaaagg 4887 Query: 123 gttctctattgatgcaaacgctgtaccta 151 ||| ||||||||| ||||| ||||||||| Sbjct: 4888 gttatctattgattcaaacactgtaccta 4916
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 131 bits (66), Expect = 2e-27 Identities = 91/98 (92%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 18052972 tgcctaaccgcatgg-ataagttcacattaacccatcaatcttggatccaattcgggatt 18052914 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaata 98 ||| |||||| ||||||||||||| ||||||||||||| Sbjct: 18052913 tttgttgggatgtttcgggaagaatttggaatggaata 18052876
>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08 Length = 155316 Score = 131 bits (66), Expect = 2e-27 Identities = 91/98 (92%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 46094 tgcctaaccgcatgg-ataagttcacattaacccatcaatcttggatccaattcgggatt 46036 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaata 98 ||| |||||| ||||||||||||| ||||||||||||| Sbjct: 46035 tttgttgggatgtttcgggaagaatttggaatggaata 45998
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 131 bits (66), Expect = 2e-27 Identities = 91/98 (92%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatt 60 ||||||||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||| Sbjct: 104626 tgcctaaccgcatgg-ataagttcacattaacccatcaatcttggatccaattcgggatt 104568 Query: 61 tttcttgggaagtttcgggaagaaattggaatggaata 98 ||| |||||| ||||||||||||| ||||||||||||| Sbjct: 104567 tttgttgggatgtttcgggaagaatttggaatggaata 104530
>gb|AC135562.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0087P19, complete sequence Length = 172066 Score = 123 bits (62), Expect = 5e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||| Sbjct: 24060 aagtcgaagatagaagagcccagatttcaaatgaagaaatagaaactcgaaaaagatcct 24119 Query: 278 tctgattctcaaag 291 |||||||||||||| Sbjct: 24120 tctgattctcaaag 24133
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 123 bits (62), Expect = 5e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||| Sbjct: 10127896 aagtcgaagatagaagagcccagatttcaaatgaagaaatagaaactcgaaaaagatcct 10127955 Query: 278 tctgattctcaaag 291 |||||||||||||| Sbjct: 10127956 tctgattctcaaag 10127969
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 123 bits (62), Expect = 5e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 218 aagtcgaagatagaagagcccagattccaaatgaagaaatggaaactcgaaaaggatcct 277 |||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||| Sbjct: 10199593 aagtcgaagatagaagagcccagatttcaaatgaagaaatagaaactcgaaaaagatcct 10199652 Query: 278 tctgattctcaaag 291 |||||||||||||| Sbjct: 10199653 tctgattctcaaag 10199666
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 121 bits (61), Expect = 2e-24 Identities = 142/169 (84%), Gaps = 10/169 (5%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | Sbjct: 144738 taaccgcatgg-ataagctcacgccaacccgtcaatttgggatccaattcgggattttcc 144796 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || ||||||| |||||||||| |||||||| |||||||||||| ||||| Sbjct: 144797 ttgggaggtatcgggaaagaattggaatgtaataatatcgattcatacagaagaaaa--- 144853 Query: 125 tctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||| ||||||||||||||| |||||| |||||||| |||| Sbjct: 144854 ------ttgattcaaacgctgtacctatgggatagagatagagggagag 144896 Score = 121 bits (61), Expect = 2e-24 Identities = 142/169 (84%), Gaps = 10/169 (5%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | Sbjct: 105207 taaccgcatgg-ataagctcacgccaacccgtcaatttgggatccaattcgggattttcc 105149 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaaggt 124 |||||| || ||||||| |||||||||| |||||||| |||||||||||| ||||| Sbjct: 105148 ttgggaggtatcgggaaagaattggaatgtaataatatcgattcatacagaagaaaa--- 105092 Query: 125 tctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||| ||||||||||||||| |||||| |||||||| |||| Sbjct: 105091 ------ttgattcaaacgctgtacctatgggatagagatagagggagag 105049 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/102 (87%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 237 ccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctcaaagaatga 296 |||||||||||||| | |||| ||||||||||||| | ||||||||||| |||||||| Sbjct: 145064 ccagattccaaatggacaaattcaaactcgaaaaggtcctttctgattctcgaagaatga 145123 Query: 297 ggggcaaggggattgataccgagaaagatttcttcttattat 338 ||| ||||||||||||| |||||||||| ||||||| |||| Sbjct: 145124 gggacaaggggattgat--cgagaaagatctcttcttcttat 145163 Score = 93.7 bits (47), Expect = 5e-16 Identities = 89/102 (87%), Gaps = 2/102 (1%) Strand = Plus / Minus Query: 237 ccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctcaaagaatga 296 |||||||||||||| | |||| ||||||||||||| | ||||||||||| |||||||| Sbjct: 104881 ccagattccaaatggacaaattcaaactcgaaaaggtcctttctgattctcgaagaatga 104822 Query: 297 ggggcaaggggattgataccgagaaagatttcttcttattat 338 ||| ||||||||||||| |||||||||| ||||||| |||| Sbjct: 104821 gggacaaggggattgat--cgagaaagatctcttcttcttat 104782 Score = 63.9 bits (32), Expect = 4e-07 Identities = 112/135 (82%), Gaps = 14/135 (10%) Strand = Plus / Plus Query: 334 attataaga-cgtgatttgatccgcatatgtttggt-----aaaagaacaatcttctcct 387 ||||||||| |||||||||||||||||||||||| | ||||||| |||||||||| Sbjct: 145177 attataagatcgtgatttgatccgcatatgtttgtttggtaaaaagaataatcttctccc 145236 Query: 388 ttaatcata--tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattgg 445 || |||||| ||| ||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 145237 ttgatcataattca-aaatggaaa-----caattgaaacatgaaaacgtgactgaattgg 145290 Query: 446 tcttagttagtcttc 460 || |||||| ||||| Sbjct: 145291 tcctagttactcttc 145305 Score = 63.9 bits (32), Expect = 4e-07 Identities = 112/135 (82%), Gaps = 14/135 (10%) Strand = Plus / Minus Query: 334 attataaga-cgtgatttgatccgcatatgtttggt-----aaaagaacaatcttctcct 387 ||||||||| |||||||||||||||||||||||| | ||||||| |||||||||| Sbjct: 104768 attataagatcgtgatttgatccgcatatgtttgtttggtaaaaagaataatcttctccc 104709 Query: 388 ttaatcata--tcataaatggaaagtgttcaattagaacatgaaaacgtgactcaattgg 445 || |||||| ||| ||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 104708 ttgatcataattca-aaatggaaa-----caattgaaacatgaaaacgtgactgaattgg 104655 Query: 446 tcttagttagtcttc 460 || |||||| ||||| Sbjct: 104654 tcctagttactcttc 104640
>gb|AF315313.1|AF315313 Populus tomentosa ribosomal protein S12 (rps12) gene, partial cds; and ribosomal protein S7 (rps7) pseudogene, complete sequence; chloroplast genes for chloroplast products Length = 1766 Score = 119 bits (60), Expect = 8e-24 Identities = 107/120 (89%), Gaps = 2/120 (1%) Strand = Plus / Plus Query: 343 cgtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tcat 400 ||||||| |||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 5 cgtgattggatccgcatatgtttggtaaaaagaacaatcttctcctttgacaataatcaa 64 Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||| ||||||||||||||| |||||||||||||||||| |||| ||| |||||| ||||| Sbjct: 65 aaaaggaaagtgttcaattggaacatgaaaacgtgactgaatttgtcctagttactcttc 124
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 119 bits (60), Expect = 8e-24 Identities = 129/150 (86%), Gaps = 9/150 (6%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggat---ccaattcgggattt 61 ||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||||| Sbjct: 40891 taaccgcatgg-ataagctcacactaacccgtcaatttgggatgatccaattcgggattt 40833 Query: 62 ttcttgggaagtttcgggaagaaattggaatggaataatatagattcatacagaggaaaa 121 | ||||||| || |||||||| |||||||||| | || ||||||| |||| ||||| Sbjct: 40832 tccttgggaggtatcgggaaggaattggaatgta-----atcgattcatgcagaagaaaa 40778 Query: 122 ggttctctattgatgcaaacgctgtaccta 151 |||||||||||||| |||||||| |||||| Sbjct: 40777 ggttctctattgattcaaacgctctaccta 40748
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 117 bits (59), Expect = 3e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 135568 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcggttttttcc 135626 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacaga 115 || |||| | | |||||| |||||||||| |||||||| |||||||||||| Sbjct: 135627 tttggaaatatagggaaggaattggaatgtaataatatcgattcatacaga 135677 Score = 117 bits (59), Expect = 3e-23 Identities = 99/111 (89%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| | Sbjct: 96888 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcggttttttcc 96830 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcatacaga 115 || |||| | | |||||| |||||||||| |||||||| |||||||||||| Sbjct: 96829 tttggaaatatagggaaggaattggaatgtaataatatcgattcatacaga 96779 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 406 gaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 |||||||||||||| || ||||||||||||||| |||| ||| |||||| ||||| Sbjct: 135828 gaaagtgttcaattggagcatgaaaacgtgactgaattagtcctagttactcttc 135882 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 406 gaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 |||||||||||||| || ||||||||||||||| |||| ||| |||||| ||||| Sbjct: 96628 gaaagtgttcaattggagcatgaaaacgtgactgaattagtcctagttactcttc 96574
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 115 bits (58), Expect = 1e-22 Identities = 146/175 (83%), Gaps = 14/175 (8%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 141067 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcggaatttt-- 141123 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 | || |||||||| |||||||||| |||||||| ||||| ||||||| || Sbjct: 141124 -----aggtatcgggaaggaattggaatgtaataatatcgattcatacagatacagaaga 141178 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||| ||||| ||||||| |||||||||||||| ||||| Sbjct: 141179 aaaggttctctattgattcaaacactgtacccgcgggatagggatagagaaagag 141233 Score = 115 bits (58), Expect = 1e-22 Identities = 146/175 (83%), Gaps = 14/175 (8%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 100843 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcggaatttt-- 100787 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 | || |||||||| |||||||||| |||||||| ||||| ||||||| || Sbjct: 100786 -----aggtatcgggaaggaattggaatgtaataatatcgattcatacagatacagaaga 100732 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||| ||||| ||||||| |||||||||||||| ||||| Sbjct: 100731 aaaggttctctattgattcaaacactgtacccgcgggatagggatagagaaagag 100677 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaa 252 ||||||||||||||||||||||||| Sbjct: 141423 tagaagagcccagattccaaatgaa 141447 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaa 252 ||||||||||||||||||||||||| Sbjct: 100487 tagaagagcccagattccaaatgaa 100463
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 115 bits (58), Expect = 1e-22 Identities = 146/175 (83%), Gaps = 14/175 (8%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 141341 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcggaatttt-- 141397 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 | || |||||||| |||||||||| |||||||| ||||| ||||||| || Sbjct: 141398 -----aggtatcgggaaggaattggaatgtaataatatcgattcatacagatacagaaga 141452 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||| ||||| ||||||| |||||||||||||| ||||| Sbjct: 141453 aaaggttctctattgattcaaacactgtacccgcgggatagggatagagaaagag 141507 Score = 115 bits (58), Expect = 1e-22 Identities = 146/175 (83%), Gaps = 14/175 (8%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 101066 taaccgcatgg-ataagctcacactaacccgtcaattttggatccaattcggaatttt-- 101010 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattc------atacagagga 118 | || |||||||| |||||||||| |||||||| ||||| ||||||| || Sbjct: 101009 -----aggtatcgggaaggaattggaatgtaataatatcgattcatacagatacagaaga 100955 Query: 119 aaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||||||||||||| ||||| ||||||| |||||||||||||| ||||| Sbjct: 100954 aaaggttctctattgattcaaacactgtacccgcgggatagggatagagaaagag 100900 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaa 252 ||||||||||||||||||||||||| Sbjct: 141697 tagaagagcccagattccaaatgaa 141721 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaa 252 ||||||||||||||||||||||||| Sbjct: 100710 tagaagagcccagattccaaatgaa 100686
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 111 bits (56), Expect = 2e-21 Identities = 183/219 (83%), Gaps = 11/219 (5%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaagga-tccttctgattct 286 ||||||| |||||||| |||||||| |||| ||||| ||||| | || |||||||||| Sbjct: 138508 tagaagaacccagattacaaatgaacaaattcaaacttgaaaaagtctctttctgattct 138567 Query: 287 caaagaatgaggggcaaggggattgataccgagaaagatttctt---cttattataagac 343 | ||||||||||||||| | ||||||| |||||||||| |||| |||||||||||| Sbjct: 138568 cgaagaatgaggggcaaagagattgat--cgagaaagatctcttgttcttattataagat 138625 Query: 344 ---gtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tc 398 |||||| || ||||| ||||||||||||| ||| |||||| |||||| | ||| || Sbjct: 138626 cgtgtgattggacccgcagatgtttggtaaaaagaataatcttatcctttgagaataatc 138685 Query: 399 ataaatggaaagtgttcaattagaacatgaaaacgtgac 437 | |||| |||||||||||||| ||||||||||||||||| Sbjct: 138686 aaaaatagaaagtgttcaattggaacatgaaaacgtgac 138724 Score = 111 bits (56), Expect = 2e-21 Identities = 183/219 (83%), Gaps = 11/219 (5%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaagga-tccttctgattct 286 ||||||| |||||||| |||||||| |||| ||||| ||||| | || |||||||||| Sbjct: 98256 tagaagaacccagattacaaatgaacaaattcaaacttgaaaaagtctctttctgattct 98197 Query: 287 caaagaatgaggggcaaggggattgataccgagaaagatttctt---cttattataagac 343 | ||||||||||||||| | ||||||| |||||||||| |||| |||||||||||| Sbjct: 98196 cgaagaatgaggggcaaagagattgat--cgagaaagatctcttgttcttattataagat 98139 Query: 344 ---gtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tc 398 |||||| || ||||| ||||||||||||| ||| |||||| |||||| | ||| || Sbjct: 98138 cgtgtgattggacccgcagatgtttggtaaaaagaataatcttatcctttgagaataatc 98079 Query: 399 ataaatggaaagtgttcaattagaacatgaaaacgtgac 437 | |||| |||||||||||||| ||||||||||||||||| Sbjct: 98078 aaaaatagaaagtgttcaattggaacatgaaaacgtgac 98040 Score = 93.7 bits (47), Expect = 5e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 138101 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgggattttcc 138159 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcata 111 ||| | | | || ||| |||||||||| |||||||| |||||||| Sbjct: 138160 ttgagggatattggtaaggaattggaatgtaataatatcgattcata 138206 Score = 93.7 bits (47), Expect = 5e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 98663 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgggattttcc 98605 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcata 111 ||| | | | || ||| |||||||||| |||||||| |||||||| Sbjct: 98604 ttgagggatattggtaaggaattggaatgtaataatatcgattcata 98558
>dbj|AP005165.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0057M23 Length = 168029 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 38 aattttggatccaattcgggatttttcttgggaagtttcgggaagaaattggaatggaat 97 ||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 25423 aatttcggatccaattcaggatttttcttggaaagtttcgggaagaaattggaatggaat 25364 Query: 98 aatata 103 |||||| Sbjct: 25363 aatata 25358 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 101 atagattcatacagaggaaaaggttctctattgatgc 137 ||||||||||| ||| |||| |||| ||||||||||| Sbjct: 24277 atagattcatatagacgaaagggttatctattgatgc 24241
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 107 bits (54), Expect = 3e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 38 aattttggatccaattcgggatttttcttgggaagtttcgggaagaaattggaatggaat 97 ||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121404 aatttcggatccaattcaggatttttcttggaaagtttcgggaagaaattggaatggaat 121345 Query: 98 aatata 103 |||||| Sbjct: 121344 aatata 121339 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Minus Query: 101 atagattcatacagaggaaaaggttctctattgatgc 137 ||||||||||| ||| |||| |||| ||||||||||| Sbjct: 120258 atagattcatatagacgaaagggttatctattgatgc 120222
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 103 bits (52), Expect = 5e-19 Identities = 182/219 (83%), Gaps = 11/219 (5%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaagga-tccttctgattct 286 ||||||| ||||||||||||||||| |||| ||||| ||||| | || |||||||||| Sbjct: 139467 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaagtctctttctgattct 139526 Query: 287 caaagaatgaggggcaaggggattgataccgagaaagatttctt---cttattataagac 343 | ||||||||||||||| | ||||||| ||||||||| |||| |||||||||||| Sbjct: 139527 cgaagaatgaggggcaaagagattgatt--gagaaagatctcttgttcttattataagat 139584 Query: 344 ---gtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tc 398 |||||| || ||||| ||||||||||||| ||| |||||| |||||| | ||| || Sbjct: 139585 cgtgtgattggacccgcagatgtttggtaaaaagaataatcttatcctttgagaataatc 139644 Query: 399 ataaatggaaagtgttcaattagaacatgaaaacgtgac 437 | |||| ||||||||||| || ||||||||||||||||| Sbjct: 139645 aaaaatagaaagtgttcagttggaacatgaaaacgtgac 139683 Score = 103 bits (52), Expect = 5e-19 Identities = 182/219 (83%), Gaps = 11/219 (5%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaagga-tccttctgattct 286 ||||||| ||||||||||||||||| |||| ||||| ||||| | || |||||||||| Sbjct: 99182 tagaagaacccagattccaaatgaacaaattcaaacttgaaaaagtctctttctgattct 99123 Query: 287 caaagaatgaggggcaaggggattgataccgagaaagatttctt---cttattataagac 343 | ||||||||||||||| | ||||||| ||||||||| |||| |||||||||||| Sbjct: 99122 cgaagaatgaggggcaaagagattgatt--gagaaagatctcttgttcttattataagat 99065 Query: 344 ---gtgatttgatccgcatatgtttggtaaaa-gaacaatcttctcctttaatcata-tc 398 |||||| || ||||| ||||||||||||| ||| |||||| |||||| | ||| || Sbjct: 99064 cgtgtgattggacccgcagatgtttggtaaaaagaataatcttatcctttgagaataatc 99005 Query: 399 ataaatggaaagtgttcaattagaacatgaaaacgtgac 437 | |||| ||||||||||| || ||||||||||||||||| Sbjct: 99004 aaaaatagaaagtgttcagttggaacatgaaaacgtgac 98966 Score = 93.7 bits (47), Expect = 5e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 139051 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgggattttcc 139109 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcata 111 ||| | | | || ||| |||||||||| |||||||| |||||||| Sbjct: 139110 ttgagggatattggtaaggaattggaatgtaataatatcgattcata 139156 Score = 93.7 bits (47), Expect = 5e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 99598 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgggattttcc 99540 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcata 111 ||| | | | || ||| |||||||||| |||||||| |||||||| Sbjct: 99539 ttgagggatattggtaaggaattggaatgtaataatatcgattcata 99493
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 99.6 bits (50), Expect = 8e-18 Identities = 147/177 (83%), Gaps = 13/177 (7%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 479 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgg----ttcc 425 Query: 65 ttgggaagtttcgggaagaaa--ttggaatggaataatatagattc------atacagag 116 || ||| || |||||||| || |||||||| |||||||| ||||| ||||||| Sbjct: 424 ttaggaggtatcgggaaggaattttggaatgtaataatatcgattcatacagatacagaa 365 Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 364 gaaagggttctctattgattcaaacgctctacctacgagatagggatagagaaagag 308
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 99.6 bits (50), Expect = 8e-18 Identities = 147/177 (83%), Gaps = 13/177 (7%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 137127 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgg----ttcc 137181 Query: 65 ttgggaagtttcgggaagaaa--ttggaatggaataatatagattc------atacagag 116 || ||| || |||||||| || |||||||| |||||||| ||||| ||||||| Sbjct: 137182 ttaggaggtatcgggaaggaattttggaatgtaataatatcgattcatacagatacagaa 137241 Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 137242 gaaagggttctctattgattcaaacgctctacctacgagatagggatagagaaagag 137298 Score = 99.6 bits (50), Expect = 8e-18 Identities = 147/177 (83%), Gaps = 13/177 (7%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 98267 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgg----ttcc 98213 Query: 65 ttgggaagtttcgggaagaaa--ttggaatggaataatatagattc------atacagag 116 || ||| || |||||||| || |||||||| |||||||| ||||| ||||||| Sbjct: 98212 ttaggaggtatcgggaaggaattttggaatgtaataatatcgattcatacagatacagaa 98153 Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 98152 gaaagggttctctattgattcaaacgctctacctacgagatagggatagagaaagag 98096 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/204 (80%), Gaps = 11/204 (5%) Strand = Plus / Plus Query: 266 gaaaaggatccttctgattctcaaagaatgaggggcaaggggattgataccgagaaagat 325 |||||||||| |||||||| | ||||||| || ||| |||||||| ||| |||||| Sbjct: 137507 gaaaaggatctttctgattattgaagaatg--ggacaaaaggattgatcgcgaaaaagat 137564 Query: 326 ttctt---cttattataaga-cgtgatttgatccgcatatgtttggtaaaa-----gaac 376 ||||| ||||||| |||| ||||||| ||||| |||||||||||||||| ||| Sbjct: 137565 ttcttgttcttattagaagatcgtgattggatccacatatgtttggtaaaaagaaagaaa 137624 Query: 377 aatcttctcctttaatcatatcataaatggaaagtgttcaattagaacatgaaaacgtga 436 ||| |||| |||| | ||| | ||| ||||||||||||||| |||||||||||||||| Sbjct: 137625 aatattcttctttgagaataataaaaaaggaaagtgttcaattggaacatgaaaacgtga 137684 Query: 437 ctcaattggtcttagttagtcttc 460 | |||||||| |||||| ||||| Sbjct: 137685 cagaattggtcctagttactcttc 137708 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/204 (80%), Gaps = 11/204 (5%) Strand = Plus / Minus Query: 266 gaaaaggatccttctgattctcaaagaatgaggggcaaggggattgataccgagaaagat 325 |||||||||| |||||||| | ||||||| || ||| |||||||| ||| |||||| Sbjct: 97887 gaaaaggatctttctgattattgaagaatg--ggacaaaaggattgatcgcgaaaaagat 97830 Query: 326 ttctt---cttattataaga-cgtgatttgatccgcatatgtttggtaaaa-----gaac 376 ||||| ||||||| |||| ||||||| ||||| |||||||||||||||| ||| Sbjct: 97829 ttcttgttcttattagaagatcgtgattggatccacatatgtttggtaaaaagaaagaaa 97770 Query: 377 aatcttctcctttaatcatatcataaatggaaagtgttcaattagaacatgaaaacgtga 436 ||| |||| |||| | ||| | ||| ||||||||||||||| |||||||||||||||| Sbjct: 97769 aatattcttctttgagaataataaaaaaggaaagtgttcaattggaacatgaaaacgtga 97710 Query: 437 ctcaattggtcttagttagtcttc 460 | |||||||| |||||| ||||| Sbjct: 97709 cagaattggtcctagttactcttc 97686
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 99.6 bits (50), Expect = 8e-18 Identities = 147/177 (83%), Gaps = 13/177 (7%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 479 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgg----ttcc 425 Query: 65 ttgggaagtttcgggaagaaa--ttggaatggaataatatagattc------atacagag 116 || ||| || |||||||| || |||||||| |||||||| ||||| ||||||| Sbjct: 424 ttaggaggtatcgggaaggaattttggaatgtaataatatcgattcatacagatacagaa 365 Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 364 gaaagggttctctattgattcaaacgctctacctacgagatagggatagagaaagag 308
>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH dehydrogenase and ORF 143 Length = 5680 Score = 91.7 bits (46), Expect = 2e-15 Identities = 146/177 (82%), Gaps = 13/177 (7%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| |||||||||||||| ||||||||||||| || | Sbjct: 2598 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaattcgg----ttcc 2652 Query: 65 ttgggaagtttcgggaa--gaaattggaatggaataatatagattc------atacagag 116 || ||| || ||||||| || |||||||| |||||||| ||||| ||||||| Sbjct: 2653 ttaggaggtatcgggaagggattttggaatgtaataatatcgattcatacagatacagaa 2712 Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| |||||||||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 2713 gaaagggttctctattgattcaaacgctctacctacgagatagggatagagaaagag 2769 Score = 77.8 bits (39), Expect = 3e-11 Identities = 165/204 (80%), Gaps = 11/204 (5%) Strand = Plus / Plus Query: 266 gaaaaggatccttctgattctcaaagaatgaggggcaaggggattgataccgagaaagat 325 |||||||||| |||||||| | ||||||| || ||| |||||||| ||| |||||| Sbjct: 2978 gaaaaggatctttctgattattgaagaatg--ggacaaaaggattgatcgcgaaaaagat 3035 Query: 326 ttctt---cttattataaga-cgtgatttgatccgcatatgtttggtaaaa-----gaac 376 ||||| ||||||| |||| ||||||| ||||| |||||||||||||||| ||| Sbjct: 3036 ttcttgttcttattagaagatcgtgattggatccacatatgtttggtaaaaagaaagaaa 3095 Query: 377 aatcttctcctttaatcatatcataaatggaaagtgttcaattagaacatgaaaacgtga 436 ||| |||| |||| | ||| | ||| ||||||||||||||| |||||||||||||||| Sbjct: 3096 aatattcttctttgagaataataaaaaaggaaagtgttcaattggaacatgaaaacgtga 3155 Query: 437 ctcaattggtcttagttagtcttc 460 | |||||||| |||||| ||||| Sbjct: 3156 cagaattggtcctagttactcttc 3179
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 81.8 bits (41), Expect = 2e-12 Identities = 48/49 (97%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 1 tgcctaaccgcatggtataagctcacattaacccgtcaattttggatcc 49 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 48 tgcctaaccgcatgg-ataagctcacattaacccgtcaattttggatcc 1
>emb|AJ000411.1|SHTAND341 Swietenia humilis DNA for simple tandem repeat (341bp) Length = 341 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 109 atacagaggaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagagg 168 ||||||| ||||||||||||||||||| |||| |||||||||| |||||||||||||| Sbjct: 310 atacagaagaaaaggttctctattgattcaaatgctgtacctatgggatagggatagaga 251 Query: 169 aagag 173 ||||| Sbjct: 250 aagag 246 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 228 tagaagagcccagattccaaatgaagaaat 257 ||||||| ||||||||||||||||| |||| Sbjct: 31 tagaagaacccagattccaaatgaacaaat 2
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 405 ggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||| |||||||||||||||||| |||||||| |||||| ||||| Sbjct: 7197 ggaaagtgttcaattggaacatgaaaacgtgactgaattggtcctagttactcttc 7252 Score = 63.9 bits (32), Expect = 4e-07 Identities = 48/52 (92%), Gaps = 1/52 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgg 56 ||||||||||| ||||||||||| |||||||||||||| |||| |||||||| Sbjct: 6681 taaccgcatgg-ataagctcacactaacccgtcaatttgggattcaattcgg 6731 Score = 60.0 bits (30), Expect = 7e-06 Identities = 86/105 (81%), Gaps = 6/105 (5%) Strand = Plus / Plus Query: 75 tcgggaagaaattggaatggaataatatagattcat------acagaggaaaaggttctc 128 |||||||| |||||||||| ||| |||| ||||||| ||||| |||| |||||| Sbjct: 6742 tcgggaaggaattggaatgtaatcatatcgattcatccaaatacagaagaaagagttctc 6801 Query: 129 tattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 ||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 6802 tattgattcaaacgctctacctacgagatagggatagagaaagag 6846 Score = 54.0 bits (27), Expect = 4e-04 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Plus Query: 266 gaaaaggatccttctgattctcaaagaatgaggggcaaggggattgataccgagaaagat 325 |||||||||| |||||||| | ||||||| |||||| |||||||| || ||||||| Sbjct: 7053 gaaaaggatctttctgattattgaagaatg--gggcaaaaggattgat--cgcgaaagat 7108 Query: 326 ttctt---cttattataaga-cgtgatttgatccgcatatgtttggtaaaa 372 ||||| ||||||| |||| ||||||| ||||| |||||||||||||||| Sbjct: 7109 ttcttgttcttattagaagatcgtgattggatccacatatgtttggtaaaa 7159
>gb|AC005693.3| Arabidopsis thaliana chromosome 2 clone T25N22 map mi310, complete sequence Length = 80891 Score = 77.8 bits (39), Expect = 3e-11 Identities = 91/107 (85%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| ||||||| |||||| ||||||||||||| ||||| | Sbjct: 11713 taaccgcatgg-ataagctcacactaacccgccaatttgggatccaattcggaattttcc 11771 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcata 111 ||| | | | || ||| |||||||||| |||||||| |||||||| Sbjct: 11772 ttgagggatattggtaaggaattggaatgtaataatatcgattcata 11818
>gb|AC139344.17| Medicago truncatula clone mth2-34b22, complete sequence Length = 129728 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||| Sbjct: 57109 taaccgcatgg-ataagctcacactaacccgtcaattttagatccaattggggatttt 57053
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||| Sbjct: 28784 taaccgcatgg-ataagctcacactaacccgtcaattttagatccaattggggatttt 28840 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 407 aaagtgttcaattagaacatgaaaacgtgactcaatt 443 |||||||||||||||||||||||||||||||| |||| Sbjct: 28958 aaagtgttcaattagaacatgaaaacgtgactgaatt 28994
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||| Sbjct: 84859 taaccgcatgg-ataagctcacactaacccgtcaattttagatccaattggggatttt 84915 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 407 aaagtgttcaattagaacatgaaaacgtgactcaatt 443 |||||||||||||||||||||||||||||||| |||| Sbjct: 85033 aaagtgttcaattagaacatgaaaacgtgactgaatt 85069
>emb|AJ517468.2|NTA517468 Nicotiana tabacum chloroplast inverse PCR product of 4.0-kb neo-hybridizing nuclear EcoRI fragment Length = 1164 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 237 ccagattccaaatgaagaaatggaaactcgaaaaggatccttctgattctcaaagaatga 296 |||||||||||||||| |||| ||||| |||||||||| | || ||||| |||||||| Sbjct: 1 ccagattccaaatgaacaaattcaaacttgaaaaggatcttccttattcttgaagaatga 60 Query: 297 ggggcaaggggattgat 313 ||||||| ||||||||| Sbjct: 61 ggggcaaagggattgat 77
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 405 ggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||| |||||||||||||||||| ||| |||| |||||| ||||| Sbjct: 57512 ggaaagtgttcaattggaacatgaaaacgtgactaaataggtcctagttactcttc 57567 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 405 ggaaagtgttcaattagaacatgaaaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||||| |||||||||||||||||| ||| |||| |||||| ||||| Sbjct: 32316 ggaaagtgttcaattggaacatgaaaacgtgactaaataggtcctagttactcttc 32261 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 17 ataagctcacattaacccgtcaattttggatccaattcgggatttttcttgggaagtttc 76 ||||||||||| ||||||||||||||||||||||||| ||||| ||| || || Sbjct: 57215 ataagctcacactaacccgtcaattttggatccaattaaatatttt-----ggaggtatc 57269 Query: 77 gggaagaaattggaatggaataatatagattcatacagaggaaaaggttctctattgat 135 || ||| ||||||| |||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 57270 ggtaaggaattggagtggaataagatcaattcatactgaagaaaaggttctatattgat 57328 Score = 69.9 bits (35), Expect = 7e-09 Identities = 98/119 (82%), Gaps = 5/119 (4%) Strand = Plus / Minus Query: 17 ataagctcacattaacccgtcaattttggatccaattcgggatttttcttgggaagtttc 76 ||||||||||| ||||||||||||||||||||||||| ||||| ||| || || Sbjct: 32613 ataagctcacactaacccgtcaattttggatccaattaaatatttt-----ggaggtatc 32559 Query: 77 gggaagaaattggaatggaataatatagattcatacagaggaaaaggttctctattgat 135 || ||| ||||||| |||||||| || |||||||| || ||||||||||| ||||||| Sbjct: 32558 ggtaaggaattggagtggaataagatcaattcatactgaagaaaaggttctatattgat 32500
>gb|AC148227.14| Medicago truncatula clone mth2-8f11, complete sequence Length = 116139 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 401 aaatggaaagtgttcaattagaacatgaaaacgtgact 438 ||||| |||||||||||||||||||||||||||||||| Sbjct: 46050 aaatgaaaagtgttcaattagaacatgaaaacgtgact 46087 Score = 63.9 bits (32), Expect = 4e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 407 aaagtgttcaattagaacatgaaaacgtgact 438 |||||||||||||||||||||||||||||||| Sbjct: 78017 aaagtgttcaattagaacatgaaaacgtgact 78048 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/107 (83%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttttc 64 ||||||||||| ||||||||||| ||||| ||||||||| |||||||| |||||||| Sbjct: 45897 taaccgcatgg-ataagctcacactaacctgtcaattttagatccaatatgggattttat 45955 Query: 65 ttgggaagtttcgggaagaaattggaatggaataatatagattcata 111 || | | || | |||||| ||||| |||| ||||| || |||||||| Sbjct: 45956 ttagaatgtattgggaaggaattgaaatgtaataagattgattcata 46002
>gb|AY841877.1| Medicago sativa ribosomal protein S12 (rps12) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; and NADH dehydrogenase subunit B (ndhB) gene, partial cds; chloroplast Length = 3347 Score = 67.9 bits (34), Expect = 3e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaattcgggatttt 62 ||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||||| Sbjct: 96 taaccgcatgg-ataagctcacactaacccgtcaatttgagatccaattggggatttt 152 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 405 ggaaagtgttcaattagaacatgaaaacgtgact 438 ||||||||||||||| |||||||||||||||||| Sbjct: 234 ggaaagtgttcaattggaacatgaaaacgtgact 267
>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0085M22, complete sequence Length = 145104 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| ||||||||||||||||||||| ||| | ||||||||| ||||||| |||||| Sbjct: 42088 gaaagggttctctattgatgcaaacgttgtgcttagaggatatggatagaagaagag 42032 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatga 251 ||||||||||||||||||||||| ||||||||||| Sbjct: 41997 taagtcgaagatagaagagcccaaattccaaatga 41963
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| ||||||||||||||||||||| ||| | ||||||||| ||||||| |||||| Sbjct: 8418545 gaaagggttctctattgatgcaaacgttgtgcttagaggatatggatagaagaagag 8418489 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatga 251 ||||||||||||||||||||||| ||||||||||| Sbjct: 8418454 taagtcgaagatagaagagcccaaattccaaatga 8418420
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 117 gaaaaggttctctattgatgcaaacgctgtacctagaggatagggatagaggaagag 173 |||| ||||||||||||||||||||| ||| | ||||||||| ||||||| |||||| Sbjct: 8416380 gaaagggttctctattgatgcaaacgttgtgcttagaggatatggatagaagaagag 8416324 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 217 taagtcgaagatagaagagcccagattccaaatga 251 ||||||||||||||||||||||| ||||||||||| Sbjct: 8416289 taagtcgaagatagaagagcccaaattccaaatga 8416255
>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2291 Score = 63.9 bits (32), Expect = 4e-07 Identities = 88/104 (84%), Gaps = 2/104 (1%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatcc-aattcgggattttt 63 ||||||||||| ||||||||||| |||||||||||||| |||||| |||| |||||| Sbjct: 205 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaaattttagattttc 147 Query: 64 cttgggaagtttcgggaagaaattggaatggaataatatagatt 107 |||||| ||| || |||| |||||||| |||| ||||| |||| Sbjct: 146 cttggggagtagcgagaaggaattggaagggaagaatatcgatt 103
>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2452 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa 51 ||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 328 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaa 283 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 429 aaacgtgactcaattggtcttagttagtcttc 460 ||||||||||||| ||||| |||||| ||||| Sbjct: 150 aaacgtgactcaactggtcctagttactcttc 119
>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2231 Score = 61.9 bits (31), Expect = 2e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatccaa 51 ||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct: 207 taaccgcatgg-ataagctcacactaacccgtcaatttgggatccaa 162
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence Length = 108135 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 34 cgtcaattttggatccaattcgggatttttcttgggaagtttcgggaagaaattggaatg 93 ||||||||| ||||| ||| |||||||| |||||| || | ||||||||||||||||| Sbjct: 27344 cgtcaatttgagatccgatttgggattttctttgggaggtattgggaagaaattggaatg 27285 Query: 94 gaataatat 102 |||||||| Sbjct: 27284 taataatat 27276
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 17 ataagctcacattaacccgtcaattttggatccaatt 53 |||||||||||||||||||||||||| | |||||||| Sbjct: 105886 ataagctcacattaacccgtcaatttcgaatccaatt 105922
>gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone mth2-1p4, complete sequence Length = 124443 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 34 cgtcaattttggatccaattcgggatttttcttgggaagtttcgggaagaaattggaatg 93 ||||||||| ||||| ||| |||||||| |||||| || | ||||||||||||||||| Sbjct: 8361 cgtcaatttgagatccgatttgggattttctttgggaggtattgggaagaaattggaatg 8420 Query: 94 gaataatat 102 |||||||| Sbjct: 8421 taataatat 8429
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 58.0 bits (29), Expect = 3e-05 Identities = 42/45 (93%), Gaps = 1/45 (2%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaattttggatcc 49 ||||||||||| ||||||||||| |||||||||||||| |||||| Sbjct: 44 taaccgcatgg-ataagctcacactaacccgtcaatttgggatcc 1
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 17 ataagctcacattaacccgtcaattttggatccaatt 53 |||||||||||||||||||||||||| | |||||||| Sbjct: 109261 ataagctcacattaacccgtcaatttcgaatccaatt 109297
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 17 ataagctcacattaacccgtcaatt 41 ||||||||||||||||||||||||| Sbjct: 153527 ataagctcacattaacccgtcaatt 153551 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 17 ataagctcacattaacccgtcaatt 41 ||||||||||||||||||||||||| Sbjct: 104935 ataagctcacattaacccgtcaatt 104911
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/46 (89%), Gaps = 2/46 (4%) Strand = Plus / Minus Query: 311 gataccgagaaagatttcttcttattataagacgtgatttgatccg 356 ||||| |||||| ||| ||||||| |||||||||||||||||||| Sbjct: 102716 gatactgagaaatattccttctta--ataagacgtgatttgatccg 102673
>gb|AC020665.6|AC020665 Arabidopsis thaliana chromosome 1 BAC T27F4 genomic sequence, complete sequence Length = 85702 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatg 258 ||||||| ||||||||||||||||| ||||| Sbjct: 45049 tagaagaacccagattccaaatgaacaaatg 45079
>emb|X04182.1|CHSARRN1 Sinapis alba chloroplast gene for tRNA-Val and 16S rDNA 5' end Length = 1793 Score = 46.1 bits (23), Expect = 0.10 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 5 taaccgcatggtataagctcacattaacccgtcaa 39 ||||||||||| ||||||||||| ||||||||||| Sbjct: 40 taaccgcatgg-ataagctcacactaacccgtcaa 7
>dbj|AB005231.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBB18 Length = 79537 Score = 46.1 bits (23), Expect = 0.10 Identities = 38/43 (88%) Strand = Plus / Plus Query: 228 tagaagagcccagattccaaatgaagaaatggaaactcgaaaa 270 ||||||| ||||||||||||||||| |||| ||||| ||||| Sbjct: 33009 tagaagaacccagattccaaatgaacaaattcaaacttgaaaa 33051
>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence Length = 186103 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 aagaaattggaatggaataata 101 |||||||||||||||||||||| Sbjct: 121982 aagaaattggaatggaataata 121961
>emb|AL928963.8| Mouse DNA sequence from clone RP23-5K9 on chromosome 2, complete sequence Length = 216315 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 gaagaaatggaaactcgaaaag 271 |||||||||||||||||||||| Sbjct: 15877 gaagaaatggaaactcgaaaag 15856
>gb|AF515720.1| Humulus lupulus clone HlGT5 microsatellite sequence Length = 473 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 agagcccagattccaaatgaa 252 ||||||||||||||||||||| Sbjct: 458 agagcccagattccaaatgaa 438
>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence Length = 162721 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 318 agaaagatttcttcttattat 338 ||||||||||||||||||||| Sbjct: 16526 agaaagatttcttcttattat 16506
>gb|AC010188.29| Homo sapiens 12 BAC RP11-225E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158591 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 ataaatggaaagtgttcaattagaa 423 ||||||||||||||||| ||||||| Sbjct: 149685 ataaatggaaagtgttctattagaa 149661
>gb|AC046135.15| Homo sapiens 12 BAC RP11-295B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175833 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 399 ataaatggaaagtgttcaattagaa 423 ||||||||||||||||| ||||||| Sbjct: 17746 ataaatggaaagtgttctattagaa 17770
>gb|AC002994.2|AC002994 Homo sapiens chromosome 17, clone RP5-987K16, complete sequence Length = 143813 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 gatttcttcttattataagac 343 ||||||||||||||||||||| Sbjct: 56754 gatttcttcttattataagac 56774
>emb|AL627350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0302E05, complete sequence Length = 61795 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/40 (90%), Gaps = 2/40 (5%) Strand = Plus / Minus Query: 317 gagaaagatttcttcttattataagacgtgatttgatccg 356 |||||| ||| ||||||| |||||||||||||||||||| Sbjct: 8617 gagaaatattccttctta--ataagacgtgatttgatccg 8580
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cttctgattctcaaagaatga 296 ||||||||||||||||||||| Sbjct: 1701192 cttctgattctcaaagaatga 1701212
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 ataagctcacattaacccgtcaatt 41 ||||||| ||||||||||||||||| Sbjct: 133464 ataagcttacattaacccgtcaatt 133488 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 ataagctcacattaacccgtcaatt 41 ||||||| ||||||||||||||||| Sbjct: 89983 ataagcttacattaacccgtcaatt 89959
>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8, complete sequence Length = 173122 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 aaagtgttcaattagaacatgaaa 430 ||||||||||||| |||||||||| Sbjct: 27186 aaagtgttcaattggaacatgaaa 27209
>gb|AC123944.4| Mus musculus BAC clone RP24-87F18 from chromosome 10, complete sequence Length = 194243 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 414 tcaattagaacatgaaaacgtgactcaattgg 445 ||||||| || |||||||| |||||||||||| Sbjct: 134619 tcaattaaaagatgaaaacttgactcaattgg 134588
>emb|AL391684.6| Human DNA sequence from clone RP11-441O15 on chromosome 10 Contains the CNNM1 gene for cyclin M1, the GOT1 gene for glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1), a novel gene and two CpG islands, complete sequence Length = 172792 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 149 ctagaggatagggatagaggaaga 172 |||||||||||||||| ||||||| Sbjct: 55112 ctagaggatagggataaaggaaga 55089
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 aatggaaagtgttcaattag 421 |||||||||||||||||||| Sbjct: 3672693 aatggaaagtgttcaattag 3672674
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17, complete sequence Length = 127259 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tttaatcatatcataaatggaaag 410 ||||||||||||||||||| |||| Sbjct: 62783 tttaatcatatcataaatgcaaag 62806
>gb|AC092979.3| Homo sapiens 3 BAC RP11-680B3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123274 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 caaatgaagaaatggaaact 264 |||||||||||||||||||| Sbjct: 45858 caaatgaagaaatggaaact 45877
>gb|AC113146.2| Homo sapiens chromosome 15, clone RP11-265N7, complete sequence Length = 178395 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tcataaatggaaagtgttca 416 |||||||||||||||||||| Sbjct: 93735 tcataaatggaaagtgttca 93754
>gb|AC004655.1| Homo sapiens Xp22-140-141 BAC GSHB-128G5 (Genome Systems Human BAC library) complete sequence Length = 134929 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 atgaagaaatggaaactcgaaaag 271 |||||||||||||||||| ||||| Sbjct: 92209 atgaagaaatggaaactcaaaaag 92186
>gb|AC067729.17| Homo sapiens 3 BAC RP11-127F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 48289 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 caaatgaagaaatggaaact 264 |||||||||||||||||||| Sbjct: 45857 caaatgaagaaatggaaact 45876
>gb|AC022108.4|AC022108 Homo sapiens chromosome 5 clone CTC-426B10, complete sequence Length = 235599 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 245 caaatgaagaaatggaaactcgaaaagg 272 ||||||||||||| ||||||| |||||| Sbjct: 168846 caaatgaagaaattgaaactcaaaaagg 168873
>gb|AC022841.4|AC022841 Homo sapiens chromosome 15, clone RP11-213C21, complete sequence Length = 157657 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tcataaatggaaagtgttca 416 |||||||||||||||||||| Sbjct: 119914 tcataaatggaaagtgttca 119895
>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence Length = 177071 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 64 cttgggaagtttcgggaagaaattggaa 91 ||||||||||| | |||||||||||||| Sbjct: 157083 cttgggaagttacaggaagaaattggaa 157110
>emb|BX296519.3| Zebrafish DNA sequence from clone CH211-278N7, complete sequence Length = 99968 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 407 aaagtgttcaattagaacatgaaa 430 ||||||||||||| |||||||||| Sbjct: 93456 aaagtgttcaattggaacatgaaa 93479
>emb|BX470219.6| Zebrafish DNA sequence from clone DKEYP-104C8 in linkage group 9, complete sequence Length = 177086 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 aatggaaagtgttcaattagaaca 425 ||||||||||||||| |||||||| Sbjct: 138437 aatggaaagtgttcatttagaaca 138414
>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence Length = 92128 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cagattccaaatgaagaaat 257 |||||||||||||||||||| Sbjct: 7394 cagattccaaatgaagaaat 7375 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,494,567 Number of Sequences: 3902068 Number of extensions: 4494567 Number of successful extensions: 94224 Number of sequences better than 10.0: 204 Number of HSP's better than 10.0 without gapping: 212 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 92537 Number of HSP's gapped (non-prelim): 1343 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
