ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16g22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033E17, full insert sequence Length = 895 Score = 575 bits (290), Expect = e-161 Identities = 482/544 (88%), Gaps = 4/544 (0%) Strand = Plus / Plus Query: 24 cggccgccggcgatggnagaagggcaagggtctcgcccgacgctgggcagtggagctcca 83 |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 120 cggccgccggcgatgg-agaagggcaagggcctcgcccgccgctgggcggtggagctcca 178 Query: 84 cgacgtatcttcctcctcctcctcgcctgcct---tccccgatcctcctggcttcaccag 140 ||||| || |||||||||||||| | ||| ||||||| || || ||||||||||| Sbjct: 179 cgacgcctcctcctcctcctcctcccactcctccatccccgacccgcccggcttcaccag 238 Query: 141 atccgccccggaagcggacgacgccgccagcgcgcggcagcgcaaggagaccgaagctgc 200 ||||||||| || ||||||||||||||| ||||||||||||| ||||| |||| | || Sbjct: 239 atccgcccccgacgcggacgacgccgccggcgcgcggcagcggaaggattccgagaccgc 298 Query: 201 ctggaaggggcagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgat 260 ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 299 gtggaaggcgcagaaagcgtgggaggtggcgcaggcgccgttcaagaacctgatgatgat 358 Query: 261 gggttttatgatgtggatggccgggagcacagtccacctgtttagcattggtatcgtctt 320 |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| || Sbjct: 359 gggtttcatgatgtggatggccgggagcaccgtccacctgtttagcataggtatcacgtt 418 Query: 321 ctctgctctctggcagcccttcaacgcactccgatctgtcgggaaagttttcgaaccatt 380 ||| ||||| ||||||||| ||| ||| ||||| ||||| || |||||||| |||||||| Sbjct: 419 ctccgctctgtggcagcccatcagcgccctccgctctgttggcaaagtttttgaaccatt 478 Query: 381 taaggacccaagggtggatacacttgcacctaagttactcttcactgctctcaacttggc 440 |||||||||||||||||||| || ||||||||||| |||| | ||||||||||||||| Sbjct: 479 caaggacccaagggtggatactctagcacctaagttggtctttattgctctcaacttggc 538 Query: 441 cgctatgggtttgggtgtttggaagctcaacacattgggtcttcttccgacaaatgcatc 500 ||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 539 agctatgggtttaggtgtatggaagctcaatacgttgggtcttcttccaacaaatgcatc 598 Query: 501 agactgggtatcttcactgtctcctgctcgggaggttgaatatgctggtggagggatccc 560 ||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 599 agattgggtgttttcactggctcctgctcgggaggttgaatatgctggtggagggatccc 658 Query: 561 cttg 564 |||| Sbjct: 659 cttg 662
>dbj|AK059166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E02, full insert sequence Length = 850 Score = 575 bits (290), Expect = e-161 Identities = 482/544 (88%), Gaps = 4/544 (0%) Strand = Plus / Plus Query: 24 cggccgccggcgatggnagaagggcaagggtctcgcccgacgctgggcagtggagctcca 83 |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 75 cggccgccggcgatgg-agaagggcaagggcctcgcccgccgctgggcggtggagctcca 133 Query: 84 cgacgtatcttcctcctcctcctcgcctgcct---tccccgatcctcctggcttcaccag 140 ||||| || |||||||||||||| | ||| ||||||| || || ||||||||||| Sbjct: 134 cgacgcctcctcctcctcctcctcccactcctccatccccgacccgcccggcttcaccag 193 Query: 141 atccgccccggaagcggacgacgccgccagcgcgcggcagcgcaaggagaccgaagctgc 200 ||||||||| || ||||||||||||||| ||||||||||||| ||||| |||| | || Sbjct: 194 atccgcccccgacgcggacgacgccgccggcgcgcggcagcggaaggattccgagaccgc 253 Query: 201 ctggaaggggcagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgat 260 ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 254 gtggaaggcgcagaaagcgtgggaggtggcgcaggcgccgttcaagaacctgatgatgat 313 Query: 261 gggttttatgatgtggatggccgggagcacagtccacctgtttagcattggtatcgtctt 320 |||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| || Sbjct: 314 gggtttcatgatgtggatggccgggagcaccgtccacctgtttagcataggtatcacgtt 373 Query: 321 ctctgctctctggcagcccttcaacgcactccgatctgtcgggaaagttttcgaaccatt 380 ||| ||||| ||||||||| ||| ||| ||||| ||||| || |||||||| |||||||| Sbjct: 374 ctccgctctgtggcagcccatcagcgccctccgctctgttggcaaagtttttgaaccatt 433 Query: 381 taaggacccaagggtggatacacttgcacctaagttactcttcactgctctcaacttggc 440 |||||||||||||||||||| || ||||||||||| |||| | ||||||||||||||| Sbjct: 434 caaggacccaagggtggatactctagcacctaagttggtctttattgctctcaacttggc 493 Query: 441 cgctatgggtttgggtgtttggaagctcaacacattgggtcttcttccgacaaatgcatc 500 ||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||| Sbjct: 494 agctatgggtttaggtgtatggaagctcaatacgttgggtcttcttccaacaaatgcatc 553 Query: 501 agactgggtatcttcactgtctcctgctcgggaggttgaatatgctggtggagggatccc 560 ||| ||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 554 agattgggtgttttcactggctcctgctcgggaggttgaatatgctggtggagggatccc 613 Query: 561 cttg 564 |||| Sbjct: 614 cttg 617
>gb|AY105445.1| Zea mays PCO122547 mRNA sequence Length = 856 Score = 438 bits (221), Expect = e-120 Identities = 454/532 (85%), Gaps = 6/532 (1%) Strand = Plus / Plus Query: 41 agaagggcaagggtctcgcccgacgctgggcagtggagctccacgacgtatcttcctcct 100 ||||||| ||||| ||||| || |||||||| |||||||||| ||||| |||||| Sbjct: 145 agaagggaaagggcctcgctcgccgctgggcggtggagctccccgacg------cctcct 198 Query: 101 cctcctcgcctgccttccccgatcctcctggcttcaccagatccgccccggaagcggacg 160 ||||||| || ||| ||||||| || || ||||||||||||||||| || || ||||||| Sbjct: 199 cctcctcccccgccgtccccgacccgcccggcttcaccagatccgcgcccgacgcggacg 258 Query: 161 acgccgccagcgcgcggcagcgcaaggagaccgaagctgcctggaaggggcagaaagcct 220 ||||||| | ||||| ||||||||||| |||| ||||| ||||||| ||||||||| | Sbjct: 259 acgccgctggagcgcgccagcgcaaggactccgaggctgcatggaaggcgcagaaagctt 318 Query: 221 gggaggtggcgcaggcgcccttcaagaacctgatgatgatgggttttatgatgtggatgg 280 |||| || |||||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 319 gggaagttgcgcaggctccgttcaagaacctgatgatgatgggatttatgatgtggatgg 378 Query: 281 ccgggagcacagtccacctgtttagcattggtatcgtcttctctgctctctggcagccct 340 | |||||||| |||||||| || ||||| || || |||||||||||| ||||| ||| Sbjct: 379 cagggagcactgtccacctcttcagcatcggaattaccttctctgctctgtggcaacccc 438 Query: 341 tcaacgcactccgatctgtcgggaaagttttcgaaccatttaaggacccaagggtggata 400 ||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 439 tcaacgctctccgatctgttgggaaagtttttgaaccatttaaggacccaagggtggata 498 Query: 401 cacttgcacctaagttactcttcactgctctcaacttggccgctatgggtttgggtgttt 460 | |||| |||||||| ||||| | ||| ||||| ||||| || ||||| |||||| | | Sbjct: 499 ctattgctcctaagttgctctttattgccctcaatttggctgccatgggattgggtatat 558 Query: 461 ggaagctcaacacattgggtcttcttccgacaaatgcatcagactgggtatcttcactgt 520 ||||||| || |||||||| |||||||| |||||| ||||||| ||||| ||||| ||| Sbjct: 559 ggaagcttaatacattgggccttcttccaacaaatccatcagattgggtgtcttctctgg 618 Query: 521 ctcctgctcgggaggttgaatatgctggtggagggatccccttgatgtaatg 572 ||||||||||||||||||||||||| || |||||| ||||||| || ||||| Sbjct: 619 ctcctgctcgggaggttgaatatgccggaggagggctccccttaatttaatg 670
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 208 gggcagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgatgggtttt 267 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 13841524 gggcagaaagcgtgggaggtggcgcaggcgccgttcaagaacctgatgatgatgggtttc 13841465 Query: 268 atgatgtggatggccgggagcacagtccacctgtttagcattggtatcgtcttctctgct 327 ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||| Sbjct: 13841464 atgatgtggatggccgggagcaccgtccacctgtttagcataggtatcacgttctccgct 13841405 Query: 328 ctctggcagcccttcaacgcactccgatctgt 359 || ||||||||| ||| ||| ||||| ||||| Sbjct: 13841404 ctgtggcagcccatcagcgccctccgctctgt 13841373 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 366 agttttcgaaccatttaaggacccaagggtggatacacttgcacctaagttactcttcac 425 |||||| |||||||| |||||||||||||||||||| || ||||||||||| |||| | Sbjct: 13840488 agtttttgaaccattcaaggacccaagggtggatactctagcacctaagttggtctttat 13840429 Query: 426 tgctctcaacttggccgctatgggtttgggtgtttggaag 465 ||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 13840428 tgctctcaacttggcagctatgggtttaggtgtatggaag 13840389 Score = 109 bits (55), Expect = 1e-20 Identities = 112/129 (86%), Gaps = 4/129 (3%) Strand = Plus / Minus Query: 24 cggccgccggcgatggnagaagggcaagggtctcgcccgacgctgggcagtggagctcca 83 |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 13842065 cggccgccggcgatgg-agaagggcaagggcctcgcccgccgctgggcggtggagctcca 13842007 Query: 84 cgacgtatcttcctcctcctcctcgc---ctgccttccccgatcctcctggcttcaccag 140 ||||| || |||||||||||||| | | || ||||||| || || ||||||||||| Sbjct: 13842006 cgacgcctcctcctcctcctcctcccactcctccatccccgacccgcccggcttcaccag 13841947 Query: 141 atccgcccc 149 ||||||||| Sbjct: 13841946 atccgcccc 13841938 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 464 agctcaacacattgggtcttcttccgacaaatgcatcagactgggtatcttcactgtctc 523 ||||||| || |||||||||||||| |||||||||||||| ||||| | ||||||| ||| Sbjct: 13840309 agctcaatacgttgggtcttcttccaacaaatgcatcagattgggtgttttcactggctc 13840250 Query: 524 ctgctcggg 532 ||||||||| Sbjct: 13840249 ctgctcggg 13840241 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 531 ggaggttgaatatgctggtggagggatccccttg 564 |||||||||||||||||||||||||||||||||| Sbjct: 13839154 ggaggttgaatatgctggtggagggatccccttg 13839121 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 156 ggacgacgccgccagcgcgcggcagcgcaagga 188 ||||||||||||| ||||||||||||| ||||| Sbjct: 13841824 ggacgacgccgccggcgcgcggcagcggaagga 13841792 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 33902207 tcttcctcctcctcctcgcc 33902188
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 208 gggcagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgatgggtttt 267 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118052 gggcagaaagcgtgggaggtggcgcaggcgccgttcaagaacctgatgatgatgggtttc 117993 Query: 268 atgatgtggatggccgggagcacagtccacctgtttagcattggtatcgtcttctctgct 327 ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||| Sbjct: 117992 atgatgtggatggccgggagcaccgtccacctgtttagcataggtatcacgttctccgct 117933 Query: 328 ctctggcagcccttcaacgcactccgatctgt 359 || ||||||||| ||| ||| ||||| ||||| Sbjct: 117932 ctgtggcagcccatcagcgccctccgctctgt 117901 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 366 agttttcgaaccatttaaggacccaagggtggatacacttgcacctaagttactcttcac 425 |||||| |||||||| |||||||||||||||||||| || ||||||||||| |||| | Sbjct: 117016 agtttttgaaccattcaaggacccaagggtggatactctagcacctaagttggtctttat 116957 Query: 426 tgctctcaacttggccgctatgggtttgggtgtttggaag 465 ||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 116956 tgctctcaacttggcagctatgggtttaggtgtatggaag 116917 Score = 109 bits (55), Expect = 1e-20 Identities = 112/129 (86%), Gaps = 4/129 (3%) Strand = Plus / Minus Query: 24 cggccgccggcgatggnagaagggcaagggtctcgcccgacgctgggcagtggagctcca 83 |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 118593 cggccgccggcgatgg-agaagggcaagggcctcgcccgccgctgggcggtggagctcca 118535 Query: 84 cgacgtatcttcctcctcctcctcgc---ctgccttccccgatcctcctggcttcaccag 140 ||||| || |||||||||||||| | | || ||||||| || || ||||||||||| Sbjct: 118534 cgacgcctcctcctcctcctcctcccactcctccatccccgacccgcccggcttcaccag 118475 Query: 141 atccgcccc 149 ||||||||| Sbjct: 118474 atccgcccc 118466 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 464 agctcaacacattgggtcttcttccgacaaatgcatcagactgggtatcttcactgtctc 523 ||||||| || |||||||||||||| |||||||||||||| ||||| | ||||||| ||| Sbjct: 116837 agctcaatacgttgggtcttcttccaacaaatgcatcagattgggtgttttcactggctc 116778 Query: 524 ctgctcggg 532 ||||||||| Sbjct: 116777 ctgctcggg 116769 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 531 ggaggttgaatatgctggtggagggatccccttg 564 |||||||||||||||||||||||||||||||||| Sbjct: 115682 ggaggttgaatatgctggtggagggatccccttg 115649 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 156 ggacgacgccgccagcgcgcggcagcgcaagga 188 ||||||||||||| ||||||||||||| ||||| Sbjct: 118352 ggacgacgccgccggcgcgcggcagcggaagga 118320
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Minus Query: 208 gggcagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgatgggtttt 267 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 13836499 gggcagaaagcgtgggaggtggcgcaggcgccgttcaagaacctgatgatgatgggtttc 13836440 Query: 268 atgatgtggatggccgggagcacagtccacctgtttagcattggtatcgtcttctctgct 327 ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| ||| Sbjct: 13836439 atgatgtggatggccgggagcaccgtccacctgtttagcataggtatcacgttctccgct 13836380 Query: 328 ctctggcagcccttcaacgcactccgatctgt 359 || ||||||||| ||| ||| ||||| ||||| Sbjct: 13836379 ctgtggcagcccatcagcgccctccgctctgt 13836348 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 366 agttttcgaaccatttaaggacccaagggtggatacacttgcacctaagttactcttcac 425 |||||| |||||||| |||||||||||||||||||| || ||||||||||| |||| | Sbjct: 13835463 agtttttgaaccattcaaggacccaagggtggatactctagcacctaagttggtctttat 13835404 Query: 426 tgctctcaacttggccgctatgggtttgggtgtttggaag 465 ||||||||||||||| ||||||||||| ||||| |||||| Sbjct: 13835403 tgctctcaacttggcagctatgggtttaggtgtatggaag 13835364 Score = 109 bits (55), Expect = 1e-20 Identities = 112/129 (86%), Gaps = 4/129 (3%) Strand = Plus / Minus Query: 24 cggccgccggcgatggnagaagggcaagggtctcgcccgacgctgggcagtggagctcca 83 |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 13837040 cggccgccggcgatgg-agaagggcaagggcctcgcccgccgctgggcggtggagctcca 13836982 Query: 84 cgacgtatcttcctcctcctcctcgc---ctgccttccccgatcctcctggcttcaccag 140 ||||| || |||||||||||||| | | || ||||||| || || ||||||||||| Sbjct: 13836981 cgacgcctcctcctcctcctcctcccactcctccatccccgacccgcccggcttcaccag 13836922 Query: 141 atccgcccc 149 ||||||||| Sbjct: 13836921 atccgcccc 13836913 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 464 agctcaacacattgggtcttcttccgacaaatgcatcagactgggtatcttcactgtctc 523 ||||||| || |||||||||||||| |||||||||||||| ||||| | ||||||| ||| Sbjct: 13835284 agctcaatacgttgggtcttcttccaacaaatgcatcagattgggtgttttcactggctc 13835225 Query: 524 ctgctcggg 532 ||||||||| Sbjct: 13835224 ctgctcggg 13835216 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 531 ggaggttgaatatgctggtggagggatccccttg 564 |||||||||||||||||||||||||||||||||| Sbjct: 13834129 ggaggttgaatatgctggtggagggatccccttg 13834096 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 156 ggacgacgccgccagcgcgcggcagcgcaagga 188 ||||||||||||| ||||||||||||| ||||| Sbjct: 13836799 ggacgacgccgccggcgcgcggcagcggaagga 13836767 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 33992679 tcttcctcctcctcctcgcc 33992660
>gb|BT014174.1| Lycopersicon esculentum clone 133316R, mRNA sequence Length = 908 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Plus Query: 211 cagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgatgggttttatg 270 |||||||| ||||| ||||| || || || |||||||| ||||||||||||| || ||| Sbjct: 221 cagaaagcgtgggaagtggcacaagcacctttcaagaatttgatgatgatgggcttcatg 280 Query: 271 atgtggatggccgggagcacagtccacctgtttagcattggtat 314 ||||||||||| || |||||||| || |||||||||||||||| Sbjct: 281 atgtggatggctggaagcacagttcatttgtttagcattggtat 324 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 460 tggaagctcaacacattgggtcttcttccgacaaatgcatcagactgggtatcttcactg 519 |||||||| ||||| |||||||||||||| || |||| ||||| ||||| || || || Sbjct: 470 tggaagcttaacactttgggtcttcttccaactcatgcgtcagattgggtttcatccttg 529 Query: 520 tctcctgctcgggaggttgaatatgctggtggagg 554 | ||||| | ||||||||| ||| |||||||||| Sbjct: 530 ccacctgcccaggaggttgagtattctggtggagg 564
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project) Length = 98473 Score = 73.8 bits (37), Expect = 6e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 210 gcagaaagcctgggaggtggcgcaggcgcccttcaagaacctgatgatgatgggttttat 269 ||||||||| ||||| || ||||| | || || ||||| |||||||||||||||| || Sbjct: 16568 gcagaaagcgtgggaagtagcgcaatctccatttaagaatttgatgatgatgggtttcat 16627 Query: 270 gatgtggatggccgggagcacagtccacctgtttagcattggtatcgtcttctctgctct 329 |||||||||||| || | |||||| || || ||||| |||||||| ||||||||||| Sbjct: 16628 gatgtggatggctggaaacacagttcatctttttagtattggtattactttctctgctct 16687 Query: 330 ctggcagcc 338 |||||||| Sbjct: 16688 ttggcagcc 16696
>ref|NM_121116.2| Arabidopsis thaliana unknown protein AT5G10780 mRNA, complete cds Length = 903 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 251 tgatgatgatgggttttatgatgtggatggccgggagcacagtccacctgtttagcattg 310 |||||||||||||||| |||||||||||||| || | |||||| || || ||||| |||| Sbjct: 300 tgatgatgatgggtttcatgatgtggatggctggaaacacagttcatctttttagtattg 359 Query: 311 gtatcgtcttctctgctctctggcagcc 338 |||| ||||||||||| |||||||| Sbjct: 360 gtattactttctctgctctttggcagcc 387
>gb|AY057731.1| Arabidopsis thaliana AT5g10780/T30N20_50 mRNA, complete cds Length = 543 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 251 tgatgatgatgggttttatgatgtggatggccgggagcacagtccacctgtttagcattg 310 |||||||||||||||| |||||||||||||| || | |||||| || || ||||| |||| Sbjct: 224 tgatgatgatgggtttcatgatgtggatggctggaaacacagttcatctttttagtattg 283 Query: 311 gtatcgtcttctctgctctctggcagcc 338 |||| ||||||||||| |||||||| Sbjct: 284 gtattactttctctgctctttggcagcc 311
>gb|AF428403.1|AF428403 Arabidopsis thaliana AT5g10780/T30N20_50 mRNA, complete cds Length = 873 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 251 tgatgatgatgggttttatgatgtggatggccgggagcacagtccacctgtttagcattg 310 |||||||||||||||| |||||||||||||| || | |||||| || || ||||| |||| Sbjct: 274 tgatgatgatgggtttcatgatgtggatggctggaaacacagttcatctttttagtattg 333 Query: 311 gtatcgtcttctctgctctctggcagcc 338 |||| ||||||||||| |||||||| Sbjct: 334 gtattactttctctgctctttggcagcc 361
>gb|AY037209.1| Arabidopsis thaliana AT5g10780/T30N20_50 mRNA, complete cds Length = 852 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 251 tgatgatgatgggttttatgatgtggatggccgggagcacagtccacctgtttagcattg 310 |||||||||||||||| |||||||||||||| || | |||||| || || ||||| |||| Sbjct: 300 tgatgatgatgggtttcatgatgtggatggctggaaacacagttcatctttttagtattg 359 Query: 311 gtatcgtcttctctgctctctggcagcc 338 |||| ||||||||||| |||||||| Sbjct: 360 gtattactttctctgctctttggcagcc 387
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 153 agcggacgacgccgccagcgcgcggcagcgc 183 |||||||||||||||| |||||||||||||| Sbjct: 2300750 agcggacgacgccgcccgcgcgcggcagcgc 2300780
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 153 agcggacgacgccgccagcgcgcggcagcgc 183 |||||||||||||||| |||||||||||||| Sbjct: 462228 agcggacgacgccgcccgcgcgcggcagcgc 462258
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 153 agcggacgacgccgccagcgcgcggcagcgc 183 |||||||||||||||| |||||||||||||| Sbjct: 1526382 agcggacgacgccgcccgcgcgcggcagcgc 1526352
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 153 agcggacgacgccgccagcgcgcggcagcgc 183 |||||||||||||||| |||||||||||||| Sbjct: 2521590 agcggacgacgccgcccgcgcgcggcagcgc 2521560
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Minus Query: 153 agcggacgacgccgccagcgcgcggcagcgca 184 ||||||| |||||||| ||||||||||||||| Sbjct: 2169617 agcggaccacgccgcccgcgcgcggcagcgca 2169586
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 225 ggtggcgcaggcgcccttcaaga 247 ||||||||||||||||||||||| Sbjct: 942020 ggtggcgcaggcgcccttcaaga 942042
>gb|BC111148.1| Bos taurus cDNA clone MGC:134460 IMAGE:8051894, complete cds Length = 1982 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 218 cctgggaggtggcgcaggcgcccttca 244 |||||||||||||| |||||||||||| Sbjct: 1551 cctgggaggtggcggaggcgcccttca 1577
>ref|NM_001038222.1| Bos taurus similar to stromal cell-derived factor 2-like 1 (MGC134460), mRNA Length = 1982 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 218 cctgggaggtggcgcaggcgcccttca 244 |||||||||||||| |||||||||||| Sbjct: 1551 cctgggaggtggcggaggcgcccttca 1577
>emb|AL844892.5| Human DNA sequence from clone RP11-396M20 on chromosome 10 Contains the 5' end of the GRID1 gene for glutamate receptor (ionotropic) delta 1, the 3' end of the gene for friend of EBNA2 (FOE) (KIAA0261) and five CpG islands, complete sequence Length = 167780 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgccttccc 119 |||||||||||||| ||||||||||| Sbjct: 34144 tcctcctcctcctcccctgccttccc 34119
>gb|AF466104.1| Xenophilus azovorans aerobic azoreductase (azoB) gene, complete cds Length = 5782 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 cgccgccagcgcgcggcagcgc 183 |||||||||||||||||||||| Sbjct: 1964 cgccgccagcgcgcggcagcgc 1985
>gb|BC103028.1| Bos taurus similar to XAP-5 protein, mRNA (cDNA clone MGC:128215 IMAGE:7958862), complete cds Length = 1799 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgcct 115 |||||||||||||||||||||| Sbjct: 480 tcctcctcctcctcgcctgcct 459
>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence Length = 191953 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 cctcctcctcgcctgccttccc 119 |||||||||||||||||||||| Sbjct: 12593 cctcctcctcgcctgccttccc 12614
>gb|AC104908.10| Mus musculus chromosome 3, clone RP23-325M18, complete sequence Length = 231792 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 405 tgcacctaagttactcttcact 426 |||||||||||||||||||||| Sbjct: 111680 tgcacctaagttactcttcact 111701
>ref|NM_001034496.1| Bos taurus similar to XAP-5 protein (MGC128215), mRNA Length = 1799 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgcct 115 |||||||||||||||||||||| Sbjct: 480 tcctcctcctcctcgcctgcct 459
>ref|NM_122278.3| Arabidopsis thaliana nucleotide binding AT5G23730 mRNA, complete cds Length = 1397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgtatcttcctcctcctcctc 107 ||||||||||||||||||||| Sbjct: 145 cgtatcttcctcctcctcctc 165
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 tcctcctcctcgcctgccttc 117 ||||||||||||||||||||| Sbjct: 64465 tcctcctcctcgcctgccttc 64485
>gb|AC092214.3| Homo sapiens BAC clone RP11-811J9 from 7, complete sequence Length = 72045 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 ctgcctggaaggggcagaaag 217 ||||||||||||||||||||| Sbjct: 9224 ctgcctggaaggggcagaaag 9204
>ref|XM_745659.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g08630) partial mRNA Length = 744 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcct 111 ||||||||||||||||||||| Sbjct: 211 tcttcctcctcctcctcgcct 231
>gb|AC166542.2| Nectria haematococca clone JGIAYWI-5G16, complete sequence Length = 38385 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcct 111 ||||||||||||||||||||| Sbjct: 13634 tcttcctcctcctcctcgcct 13614
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 418 ctcttcactgctctcaacttg 438 ||||||||||||||||||||| Sbjct: 1245140 ctcttcactgctctcaacttg 1245120
>ref|XM_783890.1| PREDICTED: Strongylocentrotus purpuratus similar to splicing factor, arginine/serine-rich 3 isoform 1 (LOC584006), mRNA Length = 1854 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cgtatcttcctcctcctcctc 107 ||||||||||||||||||||| Sbjct: 346 cgtatcttcctcctcctcctc 326
>emb|Y00436.1|MMHOX23 Murine Hox 2.3 homeotic gene Length = 1713 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcct 111 ||||||||||||||||||||| Sbjct: 973 tcttcctcctcctcctcgcct 953
>gb|AY039941.1| Arabidopsis thaliana unknown protein (At5g23730) mRNA, complete cds Length = 1281 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgtatcttcctcctcctcctc 107 ||||||||||||||||||||| Sbjct: 62 cgtatcttcctcctcctcctc 82
>emb|X06762.1|MMHOX23R Mouse Hox2.3 mRNA Length = 3554 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcct 111 ||||||||||||||||||||| Sbjct: 2814 tcttcctcctcctcctcgcct 2794
>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21) pseudogene and the 3' end of the Brip1 gene for BRCA1 interacting protein C-terminal helicase 1, complete sequence Length = 238358 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 aagctgcctggaaggggcaga 214 ||||||||||||||||||||| Sbjct: 202151 aagctgcctggaaggggcaga 202171
>emb|AJ719740.1| Gallus gallus mRNA for hypothetical protein, clone 5o22 Length = 2098 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 aggttgaatatgctggtggag 553 ||||||||||||||||||||| Sbjct: 375 aggttgaatatgctggtggag 355
>gb|AC010034.7| Drosophila melanogaster 3L BAC RP98-4A21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 154234 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgcc 114 ||||||||||||||||||||| Sbjct: 27561 tcctcctcctcctcgcctgcc 27541
>gb|AC091222.3| Drosophila melanogaster 3L BAC RP98-11G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 144056 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgcc 114 ||||||||||||||||||||| Sbjct: 101537 tcctcctcctcctcgcctgcc 101517
>gb|AC149292.15| Sus scrofa clone ch242-69g11, complete sequence Length = 215342 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgccttccc 119 ||||||||||||||||| ||| ||||||| Sbjct: 177653 tcttcctcctcctcctccccttccttccc 177681
>gb|AC084430.13| Homo sapiens 12p BAC RP11-96B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 72022 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 cttcctcctcctcctcgcctgcctt 116 |||||||||||||||||| |||||| Sbjct: 2414 cttcctcctcctcctcgcatgcctt 2390
>dbj|AK139274.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730089G01 product:Warning: possibly chimeric clone, full insert sequence Length = 3745 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 aagctgcctggaaggggcaga 214 ||||||||||||||||||||| Sbjct: 2702 aagctgcctggaaggggcaga 2682
>emb|CR390141.1| Gallus gallus finished cDNA, clone ChEST165b10 Length = 801 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 aggttgaatatgctggtggag 553 ||||||||||||||||||||| Sbjct: 169 aggttgaatatgctggtggag 149
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 atcttcctcctcctcctcgcc 110 ||||||||||||||||||||| Sbjct: 1863573 atcttcctcctcctcctcgcc 1863593
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ttcctcctcctcctcgcctgc 113 ||||||||||||||||||||| Sbjct: 24304444 ttcctcctcctcctcgcctgc 24304424 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 11008486 cttcctcctcctcctcgcct 11008505 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gccgcggccgccggcgatgg 39 |||||||||||||||||||| Sbjct: 5755416 gccgcggccgccggcgatgg 5755435 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 5491624 tcttcctcctcctcctcgcc 5491605
>ref|NM_001012848.1| Gallus gallus similar to hypothetical protein FLJ20533 (LOC420188), mRNA Length = 2098 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 533 aggttgaatatgctggtggag 553 ||||||||||||||||||||| Sbjct: 375 aggttgaatatgctggtggag 355
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 atcttcctcctcctcctcgcc 110 ||||||||||||||||||||| Sbjct: 64051 atcttcctcctcctcctcgcc 64071
>dbj|AP005300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2055_H10 Length = 119290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ttcctcctcctcctcgcctgc 113 ||||||||||||||||||||| Sbjct: 104832 ttcctcctcctcctcgcctgc 104812
>dbj|AP004747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0407A09 Length = 103788 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ttcctcctcctcctcgcctgc 113 ||||||||||||||||||||| Sbjct: 33982 ttcctcctcctcctcgcctgc 33962
>dbj|AB005244.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRO11 Length = 82415 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cgtatcttcctcctcctcctc 107 ||||||||||||||||||||| Sbjct: 3064 cgtatcttcctcctcctcctc 3084
>dbj|AK104201.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B05, full insert sequence Length = 912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcct 111 ||||||||||||||||||||| Sbjct: 42 tcttcctcctcctcctcgcct 62
>dbj|AK103589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133C07, full insert sequence Length = 2413 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 atcttcctcctcctcctcgcc 110 ||||||||||||||||||||| Sbjct: 11 atcttcctcctcctcctcgcc 31
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgcc 114 ||||||||||||||||||||| Sbjct: 283500 tcctcctcctcctcgcctgcc 283480
>gb|U81834.1|HSU81834 Human cosmid LL12NC01-95H4, ETV6 gene, exon 2 and partial cds Length = 36558 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcctgcctt 116 |||||||||||||||||| |||||| Sbjct: 34200 cttcctcctcctcctcgcatgcctt 34224
>gb|AY650353.1| Macaca fascicularis neurogenic differentiation 2 mRNA, partial cds Length = 1093 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 239 tcttcctcctcctcctcgcc 220
>gb|AC115871.8| Mus musculus chromosome 5, clone RP24-343A12, complete sequence Length = 175928 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 143627 gtatcttcctcctcctcctc 143608
>ref|NM_104683.2| Arabidopsis thaliana actin binding AT1G59910 mRNA, complete cds Length = 3006 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 519 gtatcttcctcctcctcctc 500
>gb|AC161810.10| Mus musculus chromosome 3, clone RP24-363L5, complete sequence Length = 151433 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 69774 gtatcttcctcctcctcctc 69755
>gb|DQ108072.1| Oreosoma atlanticum voucher BW-A365 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 274 cttcctcctcctcctcgcct 293
>gb|DQ108071.1| Oreosoma atlanticum voucher BW-A363 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 274 cttcctcctcctcctcgcct 293
>gb|DQ108070.1| Oreosoma atlanticum voucher BW-A362 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 274 cttcctcctcctcctcgcct 293
>gb|DQ108069.1| Oreosoma atlanticum voucher BW-A361 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 655 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 274 cttcctcctcctcctcgcct 293
>ref|XM_511583.1| PREDICTED: Pan troglodytes similar to uncharacterized hypothalamus protein HT008 (LOC454767), mRNA Length = 3936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 143 tcttcctcctcctcctcgcc 124
>ref|XM_470095.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1764 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 156 tcttcctcctcctcctcgcc 175
>ref|XM_465029.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 12 cttcctcctcctcctcgcct 31
>ref|XM_464533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gccgcggccgccggcgatgg 39 |||||||||||||||||||| Sbjct: 1308 gccgcggccgccggcgatgg 1289
>ref|XM_464485.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1379 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 251 tcttcctcctcctcctcgcc 270
>ref|XM_479654.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 118 tcctcctcctcctcgcctgc 137
>ref|XM_463600.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1134 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 1025 tcttcctcctcctcctcgcc 1006 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 983 tcttcctcctcctcctcgcc 964
>ref|NM_174649.2| Bos taurus protein kinase, cAMP-dependent, regulatory, type II, beta (PRKAR2B), mRNA Length = 1388 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 281 tcttcctcctcctcctcgcc 262
>gb|AC163337.2| Mus musculus chromosome 5, clone RP23-297I15, complete sequence Length = 154578 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 68497 gtatcttcctcctcctcctc 68516
>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence Length = 159578 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 87170 tcttcctcctcctcctctcctgcc 87193
>gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, complete sequence Length = 185119 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgccttcc 118 ||||||||||||||||| |||| ||||| Sbjct: 58339 tcttcctcctcctcctcccctggcttcc 58366
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 69907 tcttcctcctcctcctcgcc 69888
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcctcctcctcgcctgcc 114 |||||||||||||||||||| Sbjct: 74420 cctcctcctcctcgcctgcc 74439
>ref|XM_606293.2| PREDICTED: Bos taurus similar to likely ortholog of rat brain-enriched guanylate kinase-associated protein (LOC527886), mRNA Length = 2748 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 1361 gtatcttcctcctcctcctc 1342
>ref|XM_607249.2| PREDICTED: Bos taurus similar to Neurogenic differentiation factor 2 (NeuroD2) (Brain bHLH protein KW8) (LOC528817), mRNA Length = 1793 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 260 tcttcctcctcctcctcgcc 241
>gb|DQ100375.1| Struthio camelus preproopiomelanocortin mRNA, complete cds Length = 1072 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 631 cttcctcctcctcctcgcct 612
>gb|AC012297.12| Mus musculus chromosome 7, clone RP23-78H9, complete sequence Length = 180139 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 81600 tcctcctcctcctcgcctgc 81581
>ref|NM_010895.2| Mus musculus neurogenic differentiation 2 (Neurod2), mRNA Length = 1954 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 492 tcttcctcctcctcctcgcc 473
>gb|DQ437639.1| Ajellomyces capsulatus low affinity copper transporter (CTR2) gene, complete cds Length = 695 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 atcttcctcctcctcctcgc 109 |||||||||||||||||||| Sbjct: 163 atcttcctcctcctcctcgc 182
>gb|AC166244.4| Mus musculus chromosome 15, clone RP24-403A9, complete sequence Length = 133354 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 80637 gtatcttcctcctcctcctc 80656
>gb|AC165106.5| Mus musculus chromosome 15, clone CH25-352G9, complete sequence Length = 90400 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 85266 gtatcttcctcctcctcctc 85247
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 9271 gtatcttcctcctcctcctc 9252
>ref|XR_004621.1| PREDICTED: Mus musculus similar to Ig heavy chain V region 93G7 precursor (LOC674203), mRNA Length = 519 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 tcctcctcctcgcctgcctt 116 |||||||||||||||||||| Sbjct: 449 tcctcctcctcgcctgcctt 468
>gb|AC115816.9| Mus musculus chromosome 6, clone RP23-432K18, complete sequence Length = 229261 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 agctgcctggaaggggcaga 214 |||||||||||||||||||| Sbjct: 202514 agctgcctggaaggggcaga 202533
>ref|XM_485681.4| PREDICTED: Mus musculus WD repeat domain 66 (Wdr66), mRNA Length = 3869 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 635 gtatcttcctcctcctcctc 616
>gb|BC058640.1| Mus musculus zinc finger protein 710, mRNA (cDNA clone MGC:73501 IMAGE:6835601), complete cds Length = 4361 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 3916 tcttcctcctcctcctctcctgcc 3939
>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete sequence Length = 144422 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 122378 gtatcttcctcctcctcctc 122397
>ref|XM_806802.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508385.50) partial mRNA Length = 1797 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 1513 cttcctcctcctcctcgcct 1494
>gb|AC121882.3| Mus musculus BAC clone RP24-135M19 from chromosome 1, complete sequence Length = 173376 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 ccttgatgtaatgccccttg 579 |||||||||||||||||||| Sbjct: 131230 ccttgatgtaatgccccttg 131211
>gb|AC127695.3| Mus musculus BAC clone RP23-310B17 from 17, complete sequence Length = 172891 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 tgcatcagactgggtatctt 514 |||||||||||||||||||| Sbjct: 77595 tgcatcagactgggtatctt 77614
>emb|CR712875.2|CNS0GD07 Tetraodon nigroviridis full-length cDNA Length = 1001 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 gcatcagactgggtatcttc 515 |||||||||||||||||||| Sbjct: 296 gcatcagactgggtatcttc 277
>gb|BC058965.1| Mus musculus neurogenic differentiation 2, mRNA (cDNA clone MGC:67032 IMAGE:6817440), complete cds Length = 2007 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 429 tcttcctcctcctcctcgcc 410
>gb|BT010460.1| Arabidopsis thaliana formin homology 2 (FH2) domain-containingprotein (At1g59910) mRNA, complete cds Length = 2790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 519 gtatcttcctcctcctcctc 500
>gb|BC114844.1| Bos taurus cDNA clone MGC:140139 IMAGE:8165104, complete cds Length = 1772 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 970 gtatcttcctcctcctcctc 951
>emb|AL355815.9| Human DNA sequence from clone RP3-453H5 on chromosome 6 Contains a novel gene and a CpG island, complete sequence Length = 92882 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 44744 tcttcctcctcctcctcgcc 44763
>gb|AC158153.3| Mus musculus chromosome 5, clone RP23-119B3, complete sequence Length = 196824 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 81240 gtatcttcctcctcctcctc 81221
>gb|AC163670.3| Mus musculus BAC clone RP23-31C13 from chromosome 12, complete sequence Length = 214651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 208977 gtatcttcctcctcctcctc 208958
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gacgccgccagcgcgcggcagcgc 183 ||||||||||||||||||| |||| Sbjct: 311672 gacgccgccagcgcgcggcggcgc 311695
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 40.1 bits (20), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 21 ccgcggccgccggcgatggnaga 43 ||||||||||||||||||| ||| Sbjct: 34429 ccgcggccgccggcgatgggaga 34451
>gb|AC160138.2| Mus musculus BAC clone RP23-83G6 from chromosome 12, complete sequence Length = 223906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 126687 tcttcctcctcctcctcgcc 126706
>emb|AJ719708.1| Gallus gallus mRNA for hypothetical protein, clone 5h22 Length = 3649 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 875 gtatcttcctcctcctcctc 856
>gb|AY850788.1| Halichoeres melasmapomus isolate M1129 cytochrome oxidase c subunit 1 (CO1) gene, partial cds; mitochondrial Length = 650 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 262 cttcctcctcctcctcgcct 281
>emb|CR859924.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1820 (from clone DKFZp469J1820) Length = 1996 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 104 tcttcctcctcctcctcgcc 85
>emb|CR627433.1| Homo sapiens mRNA; cDNA DKFZp781G0721 (from clone DKFZp781G0721) Length = 4860 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 317 tcttcctcctcctcctcgcc 298
>gb|AF305872.2| Homo sapiens chromosome 8 clone CTD-2182N23 map 8q24.3 , complete sequence Length = 134215 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcctgccttcc 118 ||||||||||||||||| ||||||||| Sbjct: 21250 tcttcctcctcctcctcttctgccttcc 21223
>ref|NM_173167.2| Homo sapiens unc-45 homolog B (C. elegans) (UNC45B), transcript variant 1, mRNA Length = 5694 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1677 cccgacgctgggcagtggag 1696
>ref|NM_001033576.1| Homo sapiens unc-45 homolog B (C. elegans) (UNC45B), transcript variant 2, mRNA Length = 5688 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1677 cccgacgctgggcagtggag 1696
>dbj|AK091214.1| Homo sapiens cDNA FLJ33895 fis, clone CTONG2007834 Length = 3125 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 242 tcttcctcctcctcctcgcc 223
>gb|AY034610.1| Leishmania donovani hypothetical protein and hypothetical membrane protein P9 (P9) genes, complete cds Length = 4670 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 1855 tcctcctcctcctcgcctgc 1874
>gb|AC007996.11| Homo sapiens chromosome 18, clone RP11-9E17, complete sequence Length = 182884 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 165983 tcttcctcctcctcctcgcc 166002
>dbj|AK154953.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630112M12 product:Hypothetical zinc finger homolog [Mus musculus], full insert sequence Length = 4443 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 4023 tcttcctcctcctcctctcctgcc 4046
>gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, complete sequence Length = 215786 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 137132 cccgacgctgggcagtggag 137151
>dbj|AK158767.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230334G01 product:neurogenic differentiation 2, full insert sequence Length = 2293 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 612 tcttcctcctcctcctcgcc 593
>ref|NM_198773.1| Rattus norvegicus protein phosphatase 1E (PP2C domain containing) (Ppm1e), mRNA Length = 2743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 419 tcttcctcctcctcctcgcc 400
>dbj|AK033086.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030403L08 product:unclassifiable, full insert sequence Length = 2497 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 1849 tcttcctcctcctcctctcctgcc 1826
>dbj|AK036711.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830165K13 product:hypothetical Zinc finger, C2H2 type containing protein, full insert sequence Length = 3102 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 2681 tcttcctcctcctcctctcctgcc 2704
>gb|AC102011.9| Mus musculus chromosome 5, clone RP24-536B19, complete sequence Length = 142377 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 133842 gtatcttcctcctcctcctc 133861
>dbj|AK080901.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430203H04 product:hypothetical protein, full insert sequence Length = 3600 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 2383 gtatcttcctcctcctcctc 2402
>gb|AC108858.16| Mus musculus chromosome 15, clone RP24-390C21, complete sequence Length = 194163 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 79291 gtatcttcctcctcctcctc 79272
>dbj|AK017247.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430400N05 product:unclassifiable, full insert sequence Length = 2115 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 1421 tcttcctcctcctcctctcctgcc 1398
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 21 ccgcggccgccggcgatggnaga 43 ||||||||||||||||||| ||| Sbjct: 28967771 ccgcggccgccggcgatgggaga 28967793
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 3007126 cttcctcctcctcctcgcct 3007145
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcctcctcctcgcctgcc 114 |||||||||||||||||||| Sbjct: 18809153 cctcctcctcctcgcctgcc 18809172
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 114518 tcctcctcctcctcgcctgc 114499
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctgggaggtggcgcaggcgc 238 |||||||||||||||||||| Sbjct: 4682887 ctgggaggtggcgcaggcgc 4682868
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 2975891 tcttcctcctcctcctcgcc 2975872
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 39627639 tcttcctcctcctcctcgcc 39627658 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 39627597 tcttcctcctcctcctcgcc 39627616
>gb|AC155837.7| Mus musculus 6 BAC RP24-409L6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 156886 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ctggaaggggcagaaagcct 220 |||||||||||||||||||| Sbjct: 142839 ctggaaggggcagaaagcct 142820
>gb|AC114661.13| Mus musculus chromosome 5, clone RP24-166I7, complete sequence Length = 153768 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 129779 gtatcttcctcctcctcctc 129798
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 155484 tcttcctcctcctcctcgcc 155503
>dbj|AB051525.2| Homo sapiens mRNA for KIAA1738 protein, partial cds Length = 4914 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 143 tcttcctcctcctcctcgcc 124
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 108595 tcttcctcctcctcctcgcc 108614 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 108553 tcttcctcctcctcctcgcc 108572
>ref|NM_019326.1| Rattus norvegicus neurogenic differentiation 2 (Neurod2), mRNA Length = 1843 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 288 tcttcctcctcctcctcgcc 269
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 acgccgccagcgcgcggcag 180 |||||||||||||||||||| Sbjct: 1970693 acgccgccagcgcgcggcag 1970674
>gb|AF539794.1| Homo sapiens striated muscle UNC45 (UNC45) mRNA, complete cds Length = 2796 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1580 cccgacgctgggcagtggag 1599
>gb|AC022469.5|AC022469 Homo sapiens chromosome 14 clone RP11-588P7 map 14q31, complete sequence Length = 159891 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 atcttcactgtctcctgctc 529 |||||||||||||||||||| Sbjct: 131705 atcttcactgtctcctgctc 131724
>gb|AC016489.18| Homo sapiens chromosome 17, clone RP11-329L6, complete sequence Length = 179219 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 59894 tcttcctcctcctcctcgcc 59913
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 29853 tcctcctcctcctcgcctgc 29834
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 36359 tcttcctcctcctcctcgcc 36340
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0084L07 Length = 127992 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctgggaggtggcgcaggcgc 238 |||||||||||||||||||| Sbjct: 797 ctgggaggtggcgcaggcgc 778
>dbj|AP004212.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1086_G08 Length = 59883 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 35149 cttcctcctcctcctcgcct 35168
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 214685 cttcctcctcctcctcgcct 214704
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gccgcggccgccggcgatgg 39 |||||||||||||||||||| Sbjct: 44930 gccgcggccgccggcgatgg 44949
>emb|BX647642.1|HSM807788 Homo sapiens mRNA; cDNA DKFZp451P086 (from clone DKFZp451P086) Length = 5686 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1677 cccgacgctgggcagtggag 1696
>emb|BX648022.1|HSM808168 Homo sapiens mRNA; cDNA DKFZp686E248 (from clone DKFZp686E248) Length = 6221 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 100 tcttcctcctcctcctcgcc 81
>emb|BX641086.1|HSM806896 Homo sapiens mRNA; cDNA DKFZp686G2469 (from clone DKFZp686G2469) Length = 7382 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 120 tcttcctcctcctcctcgcc 101
>emb|BX647208.1|HSM807352 Homo sapiens mRNA; cDNA DKFZp686C1153 (from clone DKFZp686C1153) Length = 2244 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 59 tcttcctcctcctcctcgcc 40
>emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigroviridis, T-cell receptor alpha delta locus (germline) Length = 74861 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 58746 tcctcctcctcctcgcctgc 58765
>dbj|AP005406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1147B12 Length = 127902 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 114518 tcctcctcctcctcgcctgc 114499
>gb|AC129531.8| Homo sapiens chromosome 17, clone RP11-188B1, complete sequence Length = 164068 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 10412 tcttcctcctcctcctcgcc 10431
>ref|XM_315263.2| Anopheles gambiae str. PEST ENSANGP00000022295 (ENSANGG00000019806), partial mRNA Length = 5865 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 cttctctgctctctggcagc 337 |||||||||||||||||||| Sbjct: 4684 cttctctgctctctggcagc 4665
>dbj|AB081729.1| Rattus norvegicus mRNA for calmodulin-dependent protein kinase phosphatase N, complete cds Length = 2743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 419 tcttcctcctcctcctcgcc 400
>dbj|AK103264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124F12, full insert sequence Length = 2260 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 180 tcttcctcctcctcctcgcc 199
>dbj|AK067695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118O05, full insert sequence Length = 1379 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 251 tcttcctcctcctcctcgcc 270
>dbj|AK064841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G03, full insert sequence Length = 1917 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 118 tcctcctcctcctcgcctgc 137
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 ctgggaggtggcgcaggcgc 238 |||||||||||||||||||| Sbjct: 90260 ctgggaggtggcgcaggcgc 90241
>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR24A22, complete sequence Length = 183007 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 ggtgtttggaagctcaacac 473 |||||||||||||||||||| Sbjct: 94853 ggtgtttggaagctcaacac 94872
>gb|AF171094.1|AF171094 Lilium longiflorum lipid transfer protein precursor (LTP) mRNA, complete cds Length = 650 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 70 cttcctcctcctcctcgcct 89
>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete sequence Length = 271507 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 ggtgtttggaagctcaacac 473 |||||||||||||||||||| Sbjct: 171852 ggtgtttggaagctcaacac 171833
>gb|BC036672.1| Homo sapiens testis expressed sequence 2, mRNA (cDNA clone MGC:33636 IMAGE:4827298), complete cds Length = 4857 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 295 tcttcctcctcctcctcgcc 276
>gb|BC040522.1| Homo sapiens testis expressed sequence 2, mRNA (cDNA clone IMAGE:5265458) Length = 4833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 297 tcttcctcctcctcctcgcc 278
>gb|BC040521.1| Homo sapiens testis expressed sequence 2, mRNA (cDNA clone MGC:39510 IMAGE:4837394), complete cds Length = 5056 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 228 tcttcctcctcctcctcgcc 209
>dbj|AP005899.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-143J12, complete sequence Length = 155671 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 99631 gtatcttcctcctcctcctc 99650
>emb|BX538271.1|HSM806521 Homo sapiens mRNA; cDNA DKFZp779C1713 (from clone DKFZp779C1713); complete cds Length = 2221 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 120 tcttcctcctcctcctcgcc 101
>emb|AL834251.2|HSM805279 Homo sapiens mRNA; cDNA DKFZp451H042 (from clone DKFZp451H042); complete cds Length = 4772 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 235 tcttcctcctcctcctcgcc 216
>ref|NM_018469.3| Homo sapiens testis expressed sequence 2 (TEX2), mRNA Length = 5105 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 294 tcttcctcctcctcctcgcc 275
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcctcctcctcgcctgcc 114 |||||||||||||||||||| Sbjct: 18969226 cctcctcctcctcgcctgcc 18969245
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 3007071 cttcctcctcctcctcgcct 3007090
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 147717 cttcctcctcctcctcgcct 147698
>gb|U58471.1|MMU58471 Mus musculus NeuroD2 mRNA, complete cds Length = 1954 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 492 tcttcctcctcctcctcgcc 473
>emb|AL844498.4|CNS08CAV Oryza sativa chromosome 12, . BAC OSJNBb0059G18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145661 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cttcctcctcctcctcgcct 111 |||||||||||||||||||| Sbjct: 8975 cttcctcctcctcctcgcct 8956
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 cctcctcctcctcgcctgcc 114 |||||||||||||||||||| Sbjct: 612277 cctcctcctcctcgcctgcc 612296
>gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, complete sequence Length = 182640 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcctgccttcc 118 ||||||||||||||||| ||| |||||| Sbjct: 50042 tcttcctcctcctcctcccctcccttcc 50015
>gb|BC101063.2| Homo sapiens unc-45 homolog B (C. elegans), transcript variant 2, mRNA (cDNA clone MGC:119541 IMAGE:40008187), complete cds Length = 2790 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1580 cccgacgctgggcagtggag 1599
>gb|BC060641.1| Mus musculus zinc finger protein 710, mRNA (cDNA clone MGC:79151 IMAGE:6849964), complete cds Length = 4485 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 3999 tcttcctcctcctcctctcctgcc 4022
>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence Length = 189521 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ctggaaggggcagaaagcct 220 |||||||||||||||||||| Sbjct: 19578 ctggaaggggcagaaagcct 19559
>gb|AC124527.5| Mus musculus BAC clone RP23-411B11 from 1, complete sequence Length = 189288 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 ccttgatgtaatgccccttg 579 |||||||||||||||||||| Sbjct: 4878 ccttgatgtaatgccccttg 4859
>emb|AL929098.8| Mouse DNA sequence from clone RP23-82F19 on chromosome 4, complete sequence Length = 37531 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 tcctcctcctcctcgcctgc 113 |||||||||||||||||||| Sbjct: 33534 tcctcctcctcctcgcctgc 33515
>dbj|AP005263.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-21J18, complete sequence Length = 154926 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 12545 gtatcttcctcctcctcctc 12564
>ref|NM_175433.4| Mus musculus zinc finger protein 710 (Zfp710), mRNA Length = 4485 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgcc 114 ||||||||||||||||| |||||| Sbjct: 3999 tcttcctcctcctcctctcctgcc 4022
>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence Length = 124602 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 atgatgggttttatgatgtggatg 279 ||||||||||| |||||||||||| Sbjct: 82279 atgatgggtttgatgatgtggatg 82256
>dbj|AP004483.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13O04, TM0016, complete sequence Length = 122116 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 atgatgggttttatgatgtggatg 279 ||||||||||| |||||||||||| Sbjct: 120417 atgatgggtttgatgatgtggatg 120394
>gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, complete sequence Length = 194822 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 tcttcctcctcctcctcgcctgccttcc 118 ||||||||||||||||| |||| ||||| Sbjct: 110177 tcttcctcctcctcctcccctggcttcc 110204
>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete sequence Length = 186134 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 177495 tcttcctcctcctcctcgcc 177476
>emb|AL831792.6| Mouse DNA sequence from clone RP23-379L17 on chromosome 4, complete sequence Length = 169747 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 67444 tcttcctcctcctcctcgcc 67425
>gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosome 12, complete sequence Length = 174961 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 gtatcttcctcctcctcctc 107 |||||||||||||||||||| Sbjct: 76515 gtatcttcctcctcctcctc 76496
>emb|AL833281.1|HSM804594 Homo sapiens mRNA; cDNA DKFZp451I048 (from clone DKFZp451I048) Length = 5651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1650 cccgacgctgggcagtggag 1669
>emb|AL832371.1|HSM803679 Homo sapiens mRNA; cDNA DKFZp451B067 (from clone DKFZp451B067) Length = 4780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 224 tcttcctcctcctcctcgcc 205
>emb|AL832355.1|HSM803663 Homo sapiens mRNA; cDNA DKFZp451E226 (from clone DKFZp451E226) Length = 5684 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cccgacgctgggcagtggag 78 |||||||||||||||||||| Sbjct: 1671 cccgacgctgggcagtggag 1690
>gb|J05692.1|BOVRIIB B.taurus cAMP-dependant protein kinase regulatory subunit RII-beta mRNA, complete cds Length = 1388 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 281 tcttcctcctcctcctcgcc 262
>dbj|D83352.1|DUKNMDART1 Duck mRNA for N-methyl-D-aspartate receptor type1, complete cds Length = 3874 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 atcttcctcctcctcctcgc 109 |||||||||||||||||||| Sbjct: 2253 atcttcctcctcctcctcgc 2234
>dbj|D83507.1|MUSNDRF Mouse mRNA for NeuroD-related factor (NDRF), complete cds Length = 1831 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 296 tcttcctcctcctcctcgcc 277
>dbj|D82868.1|RAT4 Rattus norvegicus mRNA for bHLH protein, complete cds Length = 1843 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 288 tcttcctcctcctcctcgcc 269
>dbj|AB027126.1| Mus musculus NDRF gene for neuro D-related factor, complete cds Length = 4910 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcttcctcctcctcctcgcc 110 |||||||||||||||||||| Sbjct: 3216 tcttcctcctcctcctcgcc 3197 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,916,693 Number of Sequences: 3902068 Number of extensions: 5916693 Number of successful extensions: 482603 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 201 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 477638 Number of HSP's gapped (non-prelim): 4943 length of query: 588 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 565 effective length of database: 17,143,297,704 effective search space: 9685963202760 effective search space used: 9685963202760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
