ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16g20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP) 35 0.19
2SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP) 34 0.43
3E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (... 33 0.96
4SIF1_DROME (P91621) Protein still life, isoform SIF type 1 32 2.1
5LORI_HUMAN (P23490) Loricrin 32 2.1
6SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2 32 2.1
7OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b... 32 2.1
8HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor 31 2.8
9E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET... 31 2.8
10E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ET... 31 2.8
11ATG9_YARLI (Q6C2F5) Autophagy-related protein 9 31 2.8
12ALS1_CANAL (P46590) Agglutinin-like protein 1 precursor 30 6.2
13ZEN_DROSU (Q24648) Protein zerknuellt 30 6.2
14HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-... 30 6.2
15GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase... 30 8.1
16FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription fact... 30 8.1
17GBF_DICDI (P36417) G-box-binding factor (GBF) 30 8.1

>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
 Frame = -3

Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQH----CLSHHCKQRTNSHESHP 417
           PH+H    H    Q L S     N  P  P+ P H     L HH K +    + HP
Sbjct: 203 PHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHP 258



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>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
 Frame = -3

Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQH----CLSHHCKQRTNSHESHP 417
           PH+H    H    Q L S     N  P  P  P H     L HH K +    + HP
Sbjct: 203 PHYHHEHHHNHRHQHLGSSELSENQQPGAPDAPTHPAPPGLHHHHKHKGQHRQGHP 258



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>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)|
          Length = 1199

 Score = 32.7 bits (73), Expect = 0.96
 Identities = 25/89 (28%), Positives = 39/89 (43%)
 Frame = -3

Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRPPY 393
           PHHH  Q+H+  QQ  +        H ++ H   H +  H  Q+ N H S    V+ P  
Sbjct: 155 PHHHPQQEHQPQQQQQQ--------HHLQHHPHPHVMYPHGYQQANLHHSGGIAVV-PAD 205

Query: 392 RRQLIPIKLDVRRVSGAIIGSTLAAKSKG 306
            R   P  +     S  ++ +T+A+  KG
Sbjct: 206 SRPQTPEYIK----SYPVMDTTVASSVKG 230



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>SIF1_DROME (P91621) Protein still life, isoform SIF type 1|
          Length = 2072

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
 Frame = -3

Query: 584  SSLCPHHHRVQQHETSQQLLRSKNSQINLHP-VRPHEP------QHCLSHHCKQ------ 444
            SS  PH  + QQ +  QQL++  ++  + HP   P EP      Q  L HH         
Sbjct: 1920 SSPEPHQQQQQQQQQQQQLMQQGHAHAHPHPHPHPREPPPPPIRQPHLHHHSSDIERIDP 1979

Query: 443  --RTNSHESHPSCVLRPPYRRQLIPIKLDVRRVSGAIIGST 327
              ++   E      +RP       P  L +   S   +GST
Sbjct: 1980 GTKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGST 2020



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>LORI_HUMAN (P23490) Loricrin|
          Length = 316

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/58 (32%), Positives = 22/58 (37%)
 Frame = +2

Query: 398 GAEGRS*DGSRGCLFAAYSGGTGSAEVHEGAQGED*SESFCFEEAAGWSRVAVRGGGG 571
           G  G S  G  G       GG+G +  + G  G     S CF    G S     GGGG
Sbjct: 63  GCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGG 120



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>SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2|
          Length = 2061

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 15/101 (14%)
 Frame = -3

Query: 584  SSLCPHHHRVQQHETSQQLLRSKNSQINLHP-VRPHEP------QHCLSHHCKQ------ 444
            SS  PH  + QQ +  QQL++  ++  + HP   P EP      Q  L HH         
Sbjct: 1909 SSPEPHQQQQQQQQQQQQLMQQGHAHAHPHPHPHPREPPPPPIRQPHLHHHSSDIERIDP 1968

Query: 443  --RTNSHESHPSCVLRPPYRRQLIPIKLDVRRVSGAIIGST 327
              ++   E      +RP       P  L +   S   +GST
Sbjct: 1969 GTKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGST 2009



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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)|
            (Protein bifid)
          Length = 972

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = -3

Query: 569  HHHRVQQHETSQQLLRSKNSQINLHPVR--PHEPQHCLSHH 453
            HHH  Q H   QQ       Q +  P +  PH   H  SHH
Sbjct: 923  HHHHTQAHHQQQQHQSHHQQQHHQQPAQPHPHHQTHLHSHH 963



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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/50 (30%), Positives = 19/50 (38%)
 Frame = -3

Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESH 420
           HHH  + HE   +         + HP   HEP H   HH     + H  H
Sbjct: 63  HHHPEEHHEPHHE------EHHHHHPEEHHEPHHEEHHHHHPHPHHHHHH 106



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>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = -3

Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCL----SHHCKQRTNSHESHPSCVLR 402
           +H   QQ +  QQ  +S+  Q   H    H+ Q  L    SH  +Q+    + HP   L 
Sbjct: 609 YHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLN 668

Query: 401 PPY 393
            P+
Sbjct: 669 GPH 671



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>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
 Frame = -3

Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCL----SHHCKQRTNSHESHPSCVLR 402
           +H   QQ +  QQ  +S+  Q   H    H+ Q  L    SH  +Q+    + HP   L 
Sbjct: 555 YHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLN 614

Query: 401 PPY 393
            P+
Sbjct: 615 GPH 617



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>ATG9_YARLI (Q6C2F5) Autophagy-related protein 9|
          Length = 788

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 363 IKFDRNELTTIGGPKDAARMALVAVCSLLTVVGQAVLRFMRAHRV 497
           ++ D NEL TI  P+ A RMA ++  +  T VG +  + +  H +
Sbjct: 263 LEIDENELQTISWPQVAKRMATLSEANAATQVGNSTKQRIEPHDI 307



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>ALS1_CANAL (P46590) Agglutinin-like protein 1 precursor|
          Length = 1260

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 26/113 (23%), Positives = 49/113 (43%)
 Frame = -1

Query: 574 VPTTTAYSNTRPASSFFEAKTLRLIFTLCALMNLSTACPTTVSSEQTATRAILAASFGPP 395
           +PTTT  ++    ++ +  KT  +  T   ++++     TTV+SE T T           
Sbjct: 362 IPTTTITTSYVGVTTSYSTKTAPIGETATVIVDVPYHTTTTVTSEWTGT----------- 410

Query: 394 IVVSSFRSNLMYVGLAALSSAVPSQPSRRASFSRSERWIRILASHATSVSEMG 236
           I  ++ R+N       ++ + V   PS   + S +E W +  A+  T  +  G
Sbjct: 411 ITTTTTRTN----PTDSIDTVVVQVPSPNPTVSTTEYWSQSFATTTTVTAPPG 459



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>ZEN_DROSU (Q24648) Protein zerknuellt|
          Length = 373

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = -3

Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRPPYR 390
           HHH      TS Q        ++  P  P   QH   HH +Q+ +S E+ PS   +P   
Sbjct: 28  HHHSANLQPTSLQ--NYTQHSVSSIPEHPSLQQHHHQHHQQQQLSSDENLPS---QPSQD 82

Query: 389 RQLIPIK 369
            Q + +K
Sbjct: 83  MQRVKLK 89



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>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein|
            pam/highwire/rpm-1)
          Length = 5233

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -3

Query: 572  PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRP-P 396
            P HH  QQH   QQ+    N Q+  H   P + Q  + +  +  + S       +  P  
Sbjct: 3910 PPHHPQQQHHQQQQM----NLQLQQHQAPPVDGQPKVVYRRRNNSTSEGDGSLLICYPSE 3965

Query: 395  YRRQLIPIKL 366
            + R+L+P KL
Sbjct: 3966 HLRRLVPQKL 3975



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>GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)|
           ([Glutamate--ammonia-ligase] adenylyltransferase)
           (Glutamine-synthetase adenylyltransferase) (ATase)
          Length = 1004

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = +3

Query: 219 GDWMKRP-ISETEVAWLARILIHLSDRLNDALRLGCEGTADDSAANPTYIKFDRNELTTI 395
           GD +  P + E E A +AR LI  + R  D +R      A D+A +       R EL  +
Sbjct: 626 GDGLAGPKLLEAEPAMVARALITSAGRHTDPIR------AIDAARS-----LRRRELARV 674

Query: 396 GGPKDAARMALVAVCSLLTVVGQAVLR 476
           G       + +  VC  LT V  AVL+
Sbjct: 675 GSADLLGLLEVTEVCKALTSVWVAVLQ 701



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>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)|
          Length = 428

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 503 NLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRPP 396
           +LHP  PH   H   HH     + H  HP     PP
Sbjct: 135 HLHPHHPHHAHHHHHHHHHAAHHHHHHHPPQPPPPP 170



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>GBF_DICDI (P36417) G-box-binding factor (GBF)|
          Length = 708

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 569 HHHRVQQHETSQQLLRSKNSQ-INLHPVRPHEPQHCLSHHCKQRTNSHESH 420
           HH ++QQ +  QQ+   +  Q  + H  +  + QH   HH +Q+    + H
Sbjct: 168 HHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHH 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,165,295
Number of Sequences: 219361
Number of extensions: 1564060
Number of successful extensions: 5209
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5184
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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