| Clone Name | basd16g20 |
|---|---|
| Clone Library Name | barley_pub |
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 35.0 bits (79), Expect = 0.19 Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Frame = -3 Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQH----CLSHHCKQRTNSHESHP 417 PH+H H Q L S N P P+ P H L HH K + + HP Sbjct: 203 PHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHP 258
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 33.9 bits (76), Expect = 0.43 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Frame = -3 Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQH----CLSHHCKQRTNSHESHP 417 PH+H H Q L S N P P P H L HH K + + HP Sbjct: 203 PHYHHEHHHNHRHQHLGSSELSENQQPGAPDAPTHPAPPGLHHHHKHKGQHRQGHP 258
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 32.7 bits (73), Expect = 0.96 Identities = 25/89 (28%), Positives = 39/89 (43%) Frame = -3 Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRPPY 393 PHHH Q+H+ QQ + H ++ H H + H Q+ N H S V+ P Sbjct: 155 PHHHPQQEHQPQQQQQQ--------HHLQHHPHPHVMYPHGYQQANLHHSGGIAVV-PAD 205 Query: 392 RRQLIPIKLDVRRVSGAIIGSTLAAKSKG 306 R P + S ++ +T+A+ KG Sbjct: 206 SRPQTPEYIK----SYPVMDTTVASSVKG 230
>SIF1_DROME (P91621) Protein still life, isoform SIF type 1| Length = 2072 Score = 31.6 bits (70), Expect = 2.1 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 15/101 (14%) Frame = -3 Query: 584 SSLCPHHHRVQQHETSQQLLRSKNSQINLHP-VRPHEP------QHCLSHHCKQ------ 444 SS PH + QQ + QQL++ ++ + HP P EP Q L HH Sbjct: 1920 SSPEPHQQQQQQQQQQQQLMQQGHAHAHPHPHPHPREPPPPPIRQPHLHHHSSDIERIDP 1979 Query: 443 --RTNSHESHPSCVLRPPYRRQLIPIKLDVRRVSGAIIGST 327 ++ E +RP P L + S +GST Sbjct: 1980 GTKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGST 2020
>LORI_HUMAN (P23490) Loricrin| Length = 316 Score = 31.6 bits (70), Expect = 2.1 Identities = 19/58 (32%), Positives = 22/58 (37%) Frame = +2 Query: 398 GAEGRS*DGSRGCLFAAYSGGTGSAEVHEGAQGED*SESFCFEEAAGWSRVAVRGGGG 571 G G S G G GG+G + + G G S CF G S GGGG Sbjct: 63 GCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGG 120
>SIF2_DROME (P91620) Protein still life, isoforms C/SIF type 2| Length = 2061 Score = 31.6 bits (70), Expect = 2.1 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 15/101 (14%) Frame = -3 Query: 584 SSLCPHHHRVQQHETSQQLLRSKNSQINLHP-VRPHEP------QHCLSHHCKQ------ 444 SS PH + QQ + QQL++ ++ + HP P EP Q L HH Sbjct: 1909 SSPEPHQQQQQQQQQQQQLMQQGHAHAHPHPHPHPREPPPPPIRQPHLHHHSSDIERIDP 1968 Query: 443 --RTNSHESHPSCVLRPPYRRQLIPIKLDVRRVSGAIIGST 327 ++ E +RP P L + S +GST Sbjct: 1969 GTKSEGEEDSQQGTIRPKATLGRTPNHLTLSTTSTLSVGST 2009
>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind) (L(1)omb)| (Protein bifid) Length = 972 Score = 31.6 bits (70), Expect = 2.1 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Frame = -3 Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVR--PHEPQHCLSHH 453 HHH Q H QQ Q + P + PH H SHH Sbjct: 923 HHHHTQAHHQQQQHQSHHQQQHHQQPAQPHPHHQTHLHSHH 963
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/50 (30%), Positives = 19/50 (38%) Frame = -3 Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESH 420 HHH + HE + + HP HEP H HH + H H Sbjct: 63 HHHPEEHHEPHHE------EHHHHHPEEHHEPHHEEHHHHHPHPHHHHHH 106
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 31.2 bits (69), Expect = 2.8 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -3 Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCL----SHHCKQRTNSHESHPSCVLR 402 +H QQ + QQ +S+ Q H H+ Q L SH +Q+ + HP L Sbjct: 609 YHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLN 668 Query: 401 PPY 393 P+ Sbjct: 669 GPH 671
>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related| protein E74A) Length = 829 Score = 31.2 bits (69), Expect = 2.8 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -3 Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCL----SHHCKQRTNSHESHPSCVLR 402 +H QQ + QQ +S+ Q H H+ Q L SH +Q+ + HP L Sbjct: 555 YHSLHQQQQQQQQSQQSQQQQQLAHQQLSHQQQQALHQQLSHQQQQQQQQQQQHPHSQLN 614 Query: 401 PPY 393 P+ Sbjct: 615 GPH 617
>ATG9_YARLI (Q6C2F5) Autophagy-related protein 9| Length = 788 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +3 Query: 363 IKFDRNELTTIGGPKDAARMALVAVCSLLTVVGQAVLRFMRAHRV 497 ++ D NEL TI P+ A RMA ++ + T VG + + + H + Sbjct: 263 LEIDENELQTISWPQVAKRMATLSEANAATQVGNSTKQRIEPHDI 307
>ALS1_CANAL (P46590) Agglutinin-like protein 1 precursor| Length = 1260 Score = 30.0 bits (66), Expect = 6.2 Identities = 26/113 (23%), Positives = 49/113 (43%) Frame = -1 Query: 574 VPTTTAYSNTRPASSFFEAKTLRLIFTLCALMNLSTACPTTVSSEQTATRAILAASFGPP 395 +PTTT ++ ++ + KT + T ++++ TTV+SE T T Sbjct: 362 IPTTTITTSYVGVTTSYSTKTAPIGETATVIVDVPYHTTTTVTSEWTGT----------- 410 Query: 394 IVVSSFRSNLMYVGLAALSSAVPSQPSRRASFSRSERWIRILASHATSVSEMG 236 I ++ R+N ++ + V PS + S +E W + A+ T + G Sbjct: 411 ITTTTTRTN----PTDSIDTVVVQVPSPNPTVSTTEYWSQSFATTTTVTAPPG 459
>ZEN_DROSU (Q24648) Protein zerknuellt| Length = 373 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = -3 Query: 569 HHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRPPYR 390 HHH TS Q ++ P P QH HH +Q+ +S E+ PS +P Sbjct: 28 HHHSANLQPTSLQ--NYTQHSVSSIPEHPSLQQHHHQHHQQQQLSSDENLPS---QPSQD 82 Query: 389 RQLIPIK 369 Q + +K Sbjct: 83 MQRVKLK 89
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = -3 Query: 572 PHHHRVQQHETSQQLLRSKNSQINLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRP-P 396 P HH QQH QQ+ N Q+ H P + Q + + + + S + P Sbjct: 3910 PPHHPQQQHHQQQQM----NLQLQQHQAPPVDGQPKVVYRRRNNSTSEGDGSLLICYPSE 3965 Query: 395 YRRQLIPIKL 366 + R+L+P KL Sbjct: 3966 HLRRLVPQKL 3975
>GLNE_MYCLE (Q9CBT4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 1004 Score = 29.6 bits (65), Expect = 8.1 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 1/87 (1%) Frame = +3 Query: 219 GDWMKRP-ISETEVAWLARILIHLSDRLNDALRLGCEGTADDSAANPTYIKFDRNELTTI 395 GD + P + E E A +AR LI + R D +R A D+A + R EL + Sbjct: 626 GDGLAGPKLLEAEPAMVARALITSAGRHTDPIR------AIDAARS-----LRRRELARV 674 Query: 396 GGPKDAARMALVAVCSLLTVVGQAVLR 476 G + + VC LT V AVL+ Sbjct: 675 GSADLLGLLEVTEVCKALTSVWVAVLQ 701
>FOXB2_MOUSE (Q64733) Forkhead box protein B2 (Transcription factor FKH-4)| Length = 428 Score = 29.6 bits (65), Expect = 8.1 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = -3 Query: 503 NLHPVRPHEPQHCLSHHCKQRTNSHESHPSCVLRPP 396 +LHP PH H HH + H HP PP Sbjct: 135 HLHPHHPHHAHHHHHHHHHAAHHHHHHHPPQPPPPP 170
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 29.6 bits (65), Expect = 8.1 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -3 Query: 569 HHHRVQQHETSQQLLRSKNSQ-INLHPVRPHEPQHCLSHHCKQRTNSHESH 420 HH ++QQ + QQ+ + Q + H + + QH HH +Q+ + H Sbjct: 168 HHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQHQQQHHQQQQQQQQQHH 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,165,295 Number of Sequences: 219361 Number of extensions: 1564060 Number of successful extensions: 5209 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 4994 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5184 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)