ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16f21 |
|---|---|
| Clone Library Name | barley_pub |
>LSD1_MOUSE (Q6ZQ88) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (AOF2 protein) (BRAF35-HDAC complex protein BHC110) Length = 853 Score = 142 bits (358), Expect = 8e-34 Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%) Frame = +2 Query: 140 YEGDMALCTVPLGVLKNG--GIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDL 313 Y+ D LCT+PLGVLK ++FVP LP+ K +++++GFG LNKV + F VFW + Sbjct: 617 YKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSV 676 Query: 314 DTFGHLTENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILR 493 + FGH+ + RGE FLF++ + P+L+ALVAGEAA E V L IL+ Sbjct: 677 NLFGHVGSTTASRGELFLFWN---LYKAPILLALVAGEAAGIMENISDDVIVGRCLAILK 733 Query: 494 GIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 GI+ + VP P ++V +RW D ++ GSYS+VA G+SG+DYD++A Sbjct: 734 GIFGSSA--VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMA 778
>LSD1_HUMAN (O60341) Lysine-specific histone demethylase 1 (EC 1.-.-.-) (Amine| oxidase flavin-containing domain protein 2) (BRAF35-HDAC complex protein BHC110) Length = 852 Score = 142 bits (358), Expect = 8e-34 Identities = 74/167 (44%), Positives = 107/167 (64%), Gaps = 2/167 (1%) Frame = +2 Query: 140 YEGDMALCTVPLGVLKNG--GIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDL 313 Y+ D LCT+PLGVLK ++FVP LP+ K +++++GFG LNKV + F VFW + Sbjct: 616 YKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSV 675 Query: 314 DTFGHLTENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILR 493 + FGH+ + RGE FLF++ + P+L+ALVAGEAA E V L IL+ Sbjct: 676 NLFGHVGSTTASRGELFLFWN---LYKAPILLALVAGEAAGIMENISDDVIVGRCLAILK 732 Query: 494 GIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 GI+ + VP P ++V +RW D ++ GSYS+VA G+SG+DYD++A Sbjct: 733 GIFGSSA--VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMA 777
>LSDA_DROME (Q9VW97) Possible lysine-specific histone demethylase 1 (EC 1.-.-.-)| Length = 890 Score = 138 bits (348), Expect = 1e-32 Identities = 72/175 (41%), Positives = 107/175 (61%), Gaps = 10/175 (5%) Frame = +2 Query: 140 YEGDMALCTVPLGVLK----------NGGIKFVPELPQRKLDSIKKLGFGLLNKVAMLFP 289 Y+ D+ +CT+ LGVLK + +KF P LP K +IK+LGFG LNKV + F Sbjct: 609 YKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPPLPDWKQQAIKRLGFGNLNKVVLCFD 668 Query: 290 HVFWSTDLDTFGHLTENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAV 469 +FW + + FGH+ + RGE FLF+S ++ P+L+ALVAG AA+ E+ + Sbjct: 669 RIFWDPNANLFGHVGSTTASRGEMFLFWS---ISSSPVLLALVAGMAANLVESVTDDIII 725 Query: 470 SSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 + +L+ I+ VP P ++V TRW +D ++ GSYS+V+VG+SG DYD+LA Sbjct: 726 GRCMSVLKNIF--GNTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDYDLLA 778
>PAOX_BOVIN (Q865R1) Peroxisomal N1-acetyl-spermine/spermidine oxidase (EC| 1.5.3.11) (Polyamine oxidase) (Fragments) Length = 492 Score = 80.9 bits (198), Expect = 3e-15 Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 13/170 (7%) Frame = +2 Query: 164 TVPLGVLKNG-GIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHLTEN 340 TVPLG K F P LP K+++I+K+GFG NK+ + F FW D + E+ Sbjct: 267 TVPLGFFKKHLDTFFEPPLPTEKVEAIRKIGFGTNNKIFLEFEEPFWEPDCQHIQVVWED 326 Query: 341 --------PSRRGEFFL----FYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQ 484 P + +F F+ +L +AG + ET D + S+ Q Sbjct: 327 MSPLEDTAPELQDAWFKKLIGFWVLPPFQASHVLCGFIAGLESEFMETLSDEDVLRSLTQ 386 Query: 485 ILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 +LR + T ++P P + + W + ++ GSYS+VAVG+SGDD D LA Sbjct: 387 VLRRV--TGNPQLPAPRSMLRSCWHSAPYTRGSYSYVAVGSSGDDMDRLA 434
>PAOX_MOUSE (Q8C0L6) Peroxisomal N1-acetyl-spermine/spermidine oxidase (EC| 1.5.3.11) (Polyamine oxidase) Length = 503 Score = 79.7 bits (195), Expect = 7e-15 Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 13/172 (7%) Frame = +2 Query: 158 LCTVPLGVLK-NGGIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHLT 334 + TVPLG LK + F P LP +K ++IKKLGFG NK+ + F FW D + Sbjct: 276 IVTVPLGFLKEHQDTFFEPPLPAKKAEAIKKLGFGTNNKIFLEFEEPFWEPDCQFIQVVW 335 Query: 335 ENPSRRGEFFL------------FYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSV 478 E+ S + L F + +L +AG + ET + + S+ Sbjct: 336 EDTSPLQDTALSLQDTWFKKLIGFLVQPSFESSHVLCGFIAGLESEFMETLSDEEVLLSL 395 Query: 479 LQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 Q+LR + T ++P ++W + ++ GSYS+VAVG++GDD D++A Sbjct: 396 TQVLRRV--TGNPQLPAAKSVRRSQWHSAPYTRGSYSYVAVGSTGDDLDLMA 445
>PAOX_HUMAN (Q6QHF9) Peroxisomal N1-acetyl-spermine/spermidine oxidase (EC| 1.5.3.11) (Polyamine oxidase) Length = 648 Score = 77.0 bits (188), Expect = 4e-14 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 13/172 (7%) Frame = +2 Query: 158 LCTVPLGVLKNG-GIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHLT 334 + TVPLG L+ F P LP K ++I+K+GFG NK+ + F FW D + Sbjct: 421 IVTVPLGFLREHLDTFFDPPLPAEKAEAIRKIGFGTNNKIFLEFEEPFWEPDCQLIQLVW 480 Query: 335 EN--------PSRRGEFFL----FYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSV 478 E+ P + +F F A +L +AG + ET + + + Sbjct: 481 EDTSPLEDAAPELQDAWFRKLIGFVVLPAFASVHVLCGFIAGLESEFMETLSDEEVLLCL 540 Query: 479 LQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 Q+LR + T +P P + +RW + ++ GSYS+VAVG++G D D+LA Sbjct: 541 TQVLRRV--TGNPRLPAPKSVLRSRWHSAPYTRGSYSYVAVGSTGGDLDLLA 590
>PAO_MAIZE (O64411) Polyamine oxidase precursor (EC 1.5.3.11)| Length = 500 Score = 70.5 bits (171), Expect = 4e-12 Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 1/187 (0%) Frame = +2 Query: 74 RTAHTIRYXXXXXXXXXXXXXXYEGDMALCTVPLGVLKNGGIKFVPELPQRKLDSIKKLG 253 + I+Y Y D + + LGVL++ I+F P+LP K+ +I + Sbjct: 263 KVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFD 322 Query: 254 FGLLNKVAMLFPHVFWSTDLDTFGHLTENPSRRGEFFLFYSY-ATVAGGPLLMALVAGEA 430 + K+ + FP FW L + SRRG + ++ + +L+ V E Sbjct: 323 MAVYTKIFLKFPRKFWPEGKGREFFLYAS-SRRGYYGVWQEFEKQYPDANVLLVTVTDEE 381 Query: 431 AHNFETTPPTDAVSSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGAS 610 + E + ++Q+LR ++ G +VPD + RW +D F G++S+ VG + Sbjct: 382 SRRIEQQSDEQTKAEIMQVLRKMF--PGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVN 439 Query: 611 GDDYDIL 631 +YD L Sbjct: 440 RYEYDQL 446
>AMX1_CAEEL (Q21988) Amine oxidase family member 1| Length = 783 Score = 66.2 bits (160), Expect = 7e-11 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 11/169 (6%) Frame = +2 Query: 143 EGDMALCTVPLGVLKNGGIK-FVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWST-DLD 316 E D + T L VLK+ K FVP LP K +I LG GL+ K+A+ F FW T D D Sbjct: 563 EFDKVVITTSLSVLKSNHSKMFVPPLPIEKQKAIDDLGAGLIEKIAVKFDRRFWDTVDAD 622 Query: 317 -----TFGHLTENPSRRGEFFLFYSYATVAGGP----LLMALVAGEAAHNFETTPPTDAV 469 FG +++ + R F +FY ++ +LM+ V E + ++ Sbjct: 623 GLRTEYFGKVSDCKTDRSLFNIFYDFSGKDPNGEDTFVLMSYVTAEHVNLVNVLTESEVA 682 Query: 470 SSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGD 616 LR ++ + V +PL + + WG D F SY+ V G+ GD Sbjct: 683 DKFCATLRKMFPS---AVINPLGHMMSHWGADRFVGMSYTFVPFGSDGD 728
>SMOX_HUMAN (Q9NWM0) Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1)| (PAO-1) (PAOh1) Length = 555 Score = 63.2 bits (152), Expect = 6e-10 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 13/175 (7%) Frame = +2 Query: 149 DMALCTVPLGVLKNGGIKFV-PELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFG 325 D + TV LGVLK F P LP K+ +I +LG G +K+ + F FW + ++ Sbjct: 326 DHVIVTVSLGVLKRQYTSFFRPGLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQ 385 Query: 326 HLTENPSRRGEFF----LFYS--------YATVAGGPLLMALVAGEAAHNFETTPPTDAV 469 + E+ + L+Y Y G +L + GE A E Sbjct: 386 FVWEDEAESHTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMEKCDDEAVA 445 Query: 470 SSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 ++LR T +P P + + + WG++ + GSYS+ VG+SG D + LA Sbjct: 446 EICTEMLRQF--TGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLA 498
>CBP1_CANAL (P31225) Corticosteroid-binding protein| Length = 489 Score = 62.8 bits (151), Expect = 8e-10 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 17/164 (10%) Frame = +2 Query: 149 DMALCTVPLGVLKNG-----GIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWS--- 304 D + TVP +L IK+ P+LPQR ++SI + FG L KV F +FW Sbjct: 253 DYLIVTVPQSILSLEESSPYSIKWEPKLPQRLVESINSIHFGALGKVIFEFDRIFWDNSK 312 Query: 305 ---------TDLDTFGHLTENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPP 457 TD D LTE P ++ V G + ++ N+ T P Sbjct: 313 DRFQIIADHTDGDLSRELTELPKPFTYPLFAVNFGRVHNGKASLVILTQAPLTNYLETHP 372 Query: 458 TDAVSSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYS 589 A +L+ + +PDP+ ++ T W T+ + GSYS Sbjct: 373 DQAWQYYQPMLQKL-SINDEPIPDPINTIVTDWTTNPYIRGSYS 415
>SMOX_MOUSE (Q99K82) Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1)| (PAO-1) (PAOh1) Length = 555 Score = 62.0 bits (149), Expect = 1e-09 Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 13/175 (7%) Frame = +2 Query: 149 DMALCTVPLGVLKNGGIKFV-PELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFG 325 D + TV LGVLK F P LP K+ +I +LG G +K+ + F FW + ++ Sbjct: 326 DHVIVTVSLGVLKRQYTSFFRPCLPTEKVAAIHRLGIGTTDKIFLEFEEPFWGPECNSLQ 385 Query: 326 HLTENPSRRGEFF----LFYS--------YATVAGGPLLMALVAGEAAHNFETTPPTDAV 469 + E+ + L+Y Y G +L + GE A E Sbjct: 386 FVWEDEAESCTLTYPPELWYRKICGFDVLYPPERYGHVLSGWICGEEALVMERCDDEAVA 445 Query: 470 SSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 ++LR T +P P + + + WG++ + GSYS+ VG+SG D + LA Sbjct: 446 EICTEMLRQF--TGNPNIPKPRRILRSAWGSNPYFRGSYSYTQVGSSGADVEKLA 498
>LSD1_CAEEL (Q9XWP6) Probable lysine-specific histone demethylase 1 (EC| 1.-.-.-) (Suppressor of presenilin 5) (P110b homolog) Length = 770 Score = 57.8 bits (138), Expect = 3e-08 Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%) Frame = +2 Query: 164 TVPLGVLKNGGIK------FVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTD--LDT 319 T+P+GVLK I F P LP +K+++I+ +G G +NK + F VFW+ + + Sbjct: 478 TLPIGVLKKTIIADERAPTFTPSLPDKKVEAIRNIGCGSVNKCILEFDRVFWTANGGRNQ 537 Query: 320 FGHLTENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGI 499 F ++ N RG + +++V G +L + GE A P D + + + + Sbjct: 538 FVTVSPNIKTRGSMNI---WSSVPGSKVLCTYIVGEEA---MLELPDDVI--IQNAMINL 589 Query: 500 YETQGVEVP-DPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYD 625 + G P P+ + TRW D + GS + +++ +D Sbjct: 590 QKAFGNNCPRAPISAHITRWHDDELAFGSGAFMSLRTETTSFD 632
>A37C_DROME (P18487) Protein anon-37Cs| Length = 504 Score = 51.2 bits (121), Expect = 2e-06 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 9/174 (5%) Frame = +2 Query: 140 YEGDMALCTVPLGVLKN-GGIKFVPELPQRKLDSIKKLGFGLLNKVAMLF--PHVFW-ST 307 Y D +CT+PLGVLK+ G+ F P LP K+ +I+ LGFG K+ + + P W Sbjct: 283 YNADHIICTLPLGVLKSFAGVLFRPTLPLDKMLAIRNLGFGNPLKIYLSYKKPIGRWLKG 342 Query: 308 DLDTFGHL-----TENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVS 472 L G L + P R + + +L V G E P + + Sbjct: 343 SLRPLGTLLNPSVEQQPERNWTQQVVEISQVPSSQHVLEVHVGGGYYEEIEKLPDEELLE 402 Query: 473 SVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 + +LR + VP P + + + W T + LG + + +S D LA Sbjct: 403 QITGLLRRCVSSH--LVPYPQELLRSNWSTSACYLGGRPYFSTNSSARDVQRLA 454
>A37C_DROSI (O96566) Protein anon-37Cs (Fragment)| Length = 501 Score = 48.1 bits (113), Expect = 2e-05 Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 9/174 (5%) Frame = +2 Query: 140 YEGDMALCTVPLGVLKN-GGIKFVPELPQRKLDSIKKLGFGLLNKVAMLF--PHVFW-ST 307 Y D +CT+PLGVLK+ G+ F P LP K+ +I+ LGFG K+ + + P W Sbjct: 280 YNADHIICTLPLGVLKSFAGVLFRPTLPLDKMLAIRNLGFGNPLKIYLSYKKPIGRWLKG 339 Query: 308 DLDTFGHL-----TENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVS 472 L G L + P R + + +L V G E P + + Sbjct: 340 SLRPLGTLLNPSAEQQPERNWTQQVVEISQVPSSQHVLEVHVGGGYYEEIEKLPDDELLE 399 Query: 473 SVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 + +LR VP P + + + W T + LG + + S D LA Sbjct: 400 QITGLLRRCVSNN--LVPYPQELLRSNWSTSACYLGGRPYFSTINSARDVQRLA 451
>A37C_DROLE (O96570) Protein anon-37Cs| Length = 544 Score = 47.8 bits (112), Expect = 3e-05 Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 14/179 (7%) Frame = +2 Query: 140 YEGDMALCTVPLGVLKN-GGIKFVPELPQRKLDSIKKLGFGLLNKVAMLF--PHVFW-ST 307 Y D +CT+PLGVLKN I F P LP KL +I+ LG+G K+ + + P W + Sbjct: 319 YSADHIICTLPLGVLKNFSAILFKPALPLEKLQAIRNLGYGNPVKIYLAYKRPISRWLKS 378 Query: 308 DLDTFGHL--TENP----SRRGEFFLFYSYATVAGGP----LLMALVAGEAAHNFETTPP 457 +L G + P + R E ++ P +L V G E P Sbjct: 379 NLRPLGAQLGKDEPAITVNGRQERLWTQQVVEISQLPSSQHVLEIRVGGGYYDEIEKLPD 438 Query: 458 TDAVSSVLQILRGIYETQGVEVPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDILA 634 + + +LR + V P L + + W T + LG + + +S D LA Sbjct: 439 VTLLEQITALLRQCLRNRLVPYPQAL--LRSNWSTSACYLGGRPYFSTTSSARDVQRLA 495
>OXLA_MOUSE (O09046) L-amino-acid oxidase precursor (EC 1.4.3.2) (LAAO)| (Interleukin-4-induced protein 1) (IL4-induced protein 1) (Protein Fig-1) (mFIG1) Length = 630 Score = 41.2 bits (95), Expect = 0.003 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 3/146 (2%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHL-TENPSRRGEFFLFY 373 I F P L +++ ++++ L + +KV + F FW + GH T+ PSR +FY Sbjct: 327 ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEEHIEGGHSNTDRPSR----LIFY 382 Query: 374 SYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGIYETQGVEVPDPLQSVCTR 553 A G LL + +AA F + VLQ + ++ + D + V R Sbjct: 383 P-ARGEGSLLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVVFRLWDG-RGVVKR 440 Query: 554 WGTDSFSLGSY--SHVAVGASGDDYD 625 W D S G + G +DYD Sbjct: 441 WAEDPHSQGGFVVQPPLYGREAEDYD 466
>OXLA_CROAD (O93364) L-amino-acid oxidase precursor (EC 1.4.3.2) (LAO) (LAAO)| (Apoxin I) Length = 516 Score = 40.4 bits (93), Expect = 0.004 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 2/130 (1%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTD-LDTFGHLTENPSRRGEFFLFY 373 IKF P LP +K +++ + + K+ + FW D + T+ PSR F + Sbjct: 320 IKFEPPLPPKKAHALRSVHYRSGTKIFLTCTKKFWEDDGIHGGKSTTDLPSR---FIYYP 376 Query: 374 SYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGIYETQGVEVPDPLQ-SVCT 550 ++ +G +++A G+ A+ F+ D V+ L I+E ++ S+ Sbjct: 377 NHNFTSGVGVIIAYGIGDDANFFQALDFKDCADIVINDLSLIHELPKEDIQTFCHPSMIQ 436 Query: 551 RWGTDSFSLG 580 RW D +++G Sbjct: 437 RWSLDKYAMG 446
>AOFH_MYCTU (P63533) Putative flavin-containing monoamine oxidase aofH (EC| 1.4.3.-) Length = 454 Score = 39.3 bits (90), Expect = 0.010 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 1/129 (0%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHLTENPSRRGEFFLFYS 376 I+F P LP G L+K + FW G+ + S F+ + Sbjct: 278 IEFDPPLPPEYQQLAHHWPQGRLSKAYAAYSTPFWRAS----GYSGQALSDEAPVFITFD 333 Query: 377 YATVAGGP-LLMALVAGEAAHNFETTPPTDAVSSVLQILRGIYETQGVEVPDPLQSVCTR 553 + A GP +LM V A F++ P + L+ ++ G E DPL V R Sbjct: 334 VSPHADGPGILMGFVD---ARGFDSLPIEERRRDALRCFASLF---GDEALDPLDYVDYR 387 Query: 554 WGTDSFSLG 580 WGT+ F+ G Sbjct: 388 WGTEEFAPG 396
>AOFH_MYCBO (P63534) Putative flavin-containing monoamine oxidase aofH (EC| 1.4.3.-) Length = 454 Score = 39.3 bits (90), Expect = 0.010 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 1/129 (0%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHLTENPSRRGEFFLFYS 376 I+F P LP G L+K + FW G+ + S F+ + Sbjct: 278 IEFDPPLPPEYQQLAHHWPQGRLSKAYAAYSTPFWRAS----GYSGQALSDEAPVFITFD 333 Query: 377 YATVAGGP-LLMALVAGEAAHNFETTPPTDAVSSVLQILRGIYETQGVEVPDPLQSVCTR 553 + A GP +LM V A F++ P + L+ ++ G E DPL V R Sbjct: 334 VSPHADGPGILMGFVD---ARGFDSLPIEERRRDALRCFASLF---GDEALDPLDYVDYR 387 Query: 554 WGTDSFSLG 580 WGT+ F+ G Sbjct: 388 WGTEEFAPG 396
>OXLA_HUMAN (Q96RQ9) L-amino-acid oxidase precursor (EC 1.4.3.2) (LAAO)| (Interleukin-4-induced protein 1) (IL4-induced protein 1) (Protein Fig-1) (hFIG1) Length = 567 Score = 36.6 bits (83), Expect = 0.064 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 1/149 (0%) Frame = +2 Query: 143 EGDMALCTVPLGVLKNGGIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTF 322 + D+ L T +K I F P LP+ +++++L + KV + F FW + Sbjct: 314 KADVVLLTASGPAVKR--ITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWREEHIEG 371 Query: 323 GHL-TENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGI 499 GH T+ PSR +FY G LL + +AA F +A+ L + + Sbjct: 372 GHSNTDRPSR----MIFYP-PPREGALLLASYTWSDAAAAFAGLSREEALRLALDDVAAL 426 Query: 500 YETQGVEVPDPLQSVCTRWGTDSFSLGSY 586 + ++ D V RW D S G + Sbjct: 427 HGPVVRQLWDG-TGVVKRWAEDQHSQGGF 454
>OXLA_AGKRH (P81382) L-amino-acid oxidase precursor (EC 1.4.3.2) (LAO) (LAAO)| (Apoxin I) Length = 516 Score = 33.1 bits (74), Expect = 0.70 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 2/130 (1%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTD-LDTFGHLTENPSRRGEFFLFY 373 IKF P L +K +++ + + K+ + FW D + T+ PSR F + Sbjct: 320 IKFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSR---FIYYP 376 Query: 374 SYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGIYETQGVEVPD-PLQSVCT 550 ++ G +++A G+ A+ F+ D V L I++ ++ SV Sbjct: 377 NHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQ 436 Query: 551 RWGTDSFSLG 580 +W D +++G Sbjct: 437 KWSLDKYAMG 446
>P210L_MOUSE (Q9D2F7) Nuclear pore membrane glycoprotein 210-like precursor| (Nucleoporin 210 kDa-like) Length = 1881 Score = 33.1 bits (74), Expect = 0.70 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -2 Query: 363 KNSPRRLGFSVRCPKVSRSVLQNT*GNNIATLFNNPKPSF-LILSSFLCGSSGTNLIPPF 187 K + + V C ++ VL GN+ L NP PS + F+C + L+ P Sbjct: 707 KRKQNQYVYRVLCLELGEQVLTFRIGNHPGVL--NPSPSVEKVQVRFICAHPASMLVTPM 764 Query: 186 FRTPSGT 166 ++ PSGT Sbjct: 765 YKAPSGT 771
>YAR2_SCHPO (Q10135) DNA-binding protein C23E2.02 in chromosome I| Length = 1273 Score = 32.3 bits (72), Expect = 1.2 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 16/153 (10%) Frame = +2 Query: 188 NGGIKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFWSTDLDTFGHL----------TE 337 + I+F P LP ++IK + F KV + + FW ++ +FG + E Sbjct: 835 SSNIEFSPGLPNFVTENIKSIDFKPGKKVILRYAAAFWRKNIRSFGIIPKSLSQEMNNDE 894 Query: 338 NPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVLQILRGI----YE 505 N + ++ G P+L+A + + T+ ++ S ++Q L + ++ Sbjct: 895 NDGKSCFVLRIWNMLPETGVPILVADINPQM-----TSSSSNETSHLIQELHSLIVDHFQ 949 Query: 506 TQGVEVPDPLQSVCTRWGTDSF--SLGSYSHVA 598 D L + T W + L SY + A Sbjct: 950 NDSNSSADLLDAWVTNWSRNGVYDGLNSYPNFA 982
>CBIO_VIBPA (Q87G35) Putative cobalt import ATP-binding protein cbiO| Length = 579 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = -3 Query: 458 LEAWFQ-SCGQPHQQPTPSTMDHQPLLHSYRTERTPLDDLDFRSDVQR 318 ++AWF S QP + P + ++ + L +SY E+ L+D+ F D++R Sbjct: 279 VQAWFDGSTAQPPKTPAETLLEVRGLTYSYDGEKNALEDVSF--DIKR 324
>YFYA_SCHPO (Q9UT18) Putative amino-acid permease C9.10| Length = 591 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 290 HVFWSTDLDTFGHLTENPSRRGEFFLFYSYATVAGGPLLMALV 418 ++F DLDTF + N + F FYSY GG ++M +V Sbjct: 360 YLFCCPDLDTFTAILYNDNSPQPFVNFYSYLLGRGGHVVMNVV 402
>FTSK_SHIFL (Q83S00) DNA translocase ftsK| Length = 1342 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -3 Query: 536 VEDLVPQLPVFHRYPSVSEEQS*QH-QLEAWFQSCGQPHQQPTP 408 VE+ P P + + V E+++ + QL AW+Q +P ++P P Sbjct: 483 VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEP 526
>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK| Length = 1342 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -3 Query: 536 VEDLVPQLPVFHRYPSVSEEQS*QH-QLEAWFQSCGQPHQQPTP 408 VE+ P P + + V E+++ + QL AW+Q +P ++P P Sbjct: 483 VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEP 526
>FTSK_ECOLI (P46889) DNA translocase ftsK| Length = 1329 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -3 Query: 536 VEDLVPQLPVFHRYPSVSEEQS*QH-QLEAWFQSCGQPHQQPTP 408 VE+ P P + + V E+++ + QL AW+Q +P ++P P Sbjct: 483 VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEP 526
>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK| Length = 1347 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -3 Query: 536 VEDLVPQLPVFHRYPSVSEEQS*QH-QLEAWFQSCGQPHQQPTP 408 VE+ P P + + V E+++ + QL AW+Q +P ++P P Sbjct: 496 VEETKPTRPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEP 539
>AOFA_HORSE (Q5NU32) Amine oxidase [flavin-containing] A (EC 1.4.3.4)| (Monoamine oxidase type A) (MAO-A) Length = 527 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFW 301 I F PELP + I++L G + K M + FW Sbjct: 281 IHFKPELPSERNQLIQRLPMGAIIKCMMYYKEAFW 315
>HAP2_SCHPO (P24488) Transcriptional activator hap2| Length = 334 Score = 29.6 bits (65), Expect = 7.8 Identities = 18/56 (32%), Positives = 30/56 (53%) Frame = +2 Query: 314 DTFGHLTENPSRRGEFFLFYSYATVAGGPLLMALVAGEAAHNFETTPPTDAVSSVL 481 +T G+ +P+ RGE + + A ++GGP A +G H+ P TD+ +S L Sbjct: 150 NTSGNNITSPNVRGELDMSGNIA-MSGGPTNTASTSGPVPHDMTVLPQTDSNTSNL 204
>AOFA_PIG (Q6Q2J0) Amine oxidase [flavin-containing] A (EC 1.4.3.4)| (Monoamine oxidase type A) (MAO-A) Length = 527 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFW 301 I F PELP + I++L G + K M + FW Sbjct: 281 IHFRPELPSERNQLIQRLPMGAIIKCMMYYKEAFW 315
>AOFA_CANFA (P58027) Amine oxidase [flavin-containing] A (EC 1.4.3.4)| (Monoamine oxidase type A) (MAO-A) Length = 527 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +2 Query: 197 IKFVPELPQRKLDSIKKLGFGLLNKVAMLFPHVFW 301 I F PELP + I++L G + K M + FW Sbjct: 281 IHFRPELPSERNQLIQRLPMGAIIKCMMYYKEAFW 315 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,987,501 Number of Sequences: 219361 Number of extensions: 2168210 Number of successful extensions: 5830 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 5621 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5808 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
