ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16f21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK073751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 720 0.0
2ref|XM_473484.1| Oryza sativa (japonica cultivar-group), predic... 712 0.0
3emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4,... 545 e-152
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 545 e-152
5ref|NM_111874.1| Arabidopsis thaliana FLD (FLOWERING LOCUS D); a... 68 4e-08
6gb|AY849997.1| Arabidopsis thaliana ecotype Lz-0 flowering locus... 68 4e-08
7gb|AY849996.1| Arabidopsis thaliana ecotype Landsberg erecta flo... 68 4e-08
8gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13... 68 4e-08
9gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequ... 54 6e-04
10gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC... 48 0.035
11emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 44 0.55
12ref|XM_480049.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
13ref|XM_480050.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
14gb|AY695112.1| Pseudomonas luteola beta-lactamase precursor Lut-... 40 8.6
15gb|AY448016.1|AY448010S7 Ipomoea trifida haplotype S1 self-incom... 40 8.6
16emb|AL450267.10| Human DNA sequence from clone RP11-344B23 on ch... 40 8.6
17emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chr... 40 8.6
18emb|AL357503.12| Human DNA sequence from clone RP5-899C14 on chr... 40 8.6
19ref|NM_026937.1| Mus musculus activating signal cointegrator 1 c... 40 8.6
20dbj|AK139944.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 8.6
21gb|AC152929.2| Xenopus tropicalis clone ISB1-11B9, complete sequ... 40 8.6
22gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.6
23dbj|AK007519.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 8.6
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
25gb|AC096718.3| Homo sapiens BAC clone RP11-10P19 from 4, complet... 40 8.6
26dbj|AK179536.1| Mus musculus cDNA, clone:Y0G0110M15, strand:minu... 40 8.6
27dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
28dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
29dbj|AK120532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
30emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 ... 40 8.6
31dbj|AK066792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
32gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Can... 40 8.6
33emb|AL772130.15| Mouse DNA sequence from clone RP23-230O14 on ch... 40 8.6
34gb|BC030905.1| Mus musculus activating signal cointegrator 1 com... 40 8.6

>dbj|AK073751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068J22, full
            insert sequence
          Length = 2655

 Score =  720 bits (363), Expect = 0.0
 Identities = 567/633 (89%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    actgcttcctgcctggtggcaacgggnggcttgtacaggccctggcagnanaatgtgccc 60
            |||| ||| ||||||| ||||| ||  ||||||| ||||||||||||| | |||||||| 
Sbjct: 1220 actgtttcttgcctggcggcaatggtaggcttgtgcaggccctggcag-agaatgtgccg 1278

                                                                        
Query: 61   attgtttacgagnaggacagcgcacactatacggtatggaggggatggcgtgcaggtggt 120
            |||||||||||| ||||||| |||||||||||| |||||||||||||| || ||||||||
Sbjct: 1279 attgtttacgag-aggacagtgcacactatacgttatggaggggatggggttcaggtggt 1337

                                                                        
Query: 121  tgttaatggtggtcaggtgtatgaaggagacatggcgctgtgcactgtgccacttggggt 180
            ||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1338 tgtcaatggtgggcaggtgtatgaaggcgacatggcgctgtgcactgttccacttggggt 1397

                                                                        
Query: 181  tctgaaaaatgggggtatcaagtttgtacctgagctgccacaaaggaagcttgatagtat 240
            |||||||||||| ||  ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1398 tctgaaaaatggtggcgtcaagtttgtacctgagctgccacagagaaaacttgatagtat 1457

                                                                        
Query: 241  caagaaactaggctttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttg 300
             || | |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 1458 taaaagactaggctttgggttgttgaacaaggttgcaatgttgtttcctcatgttttctg 1517

                                                                        
Query: 301  gagcaccgaccttgatacctttggacatctgaccgaaaatccaagtcgtcgaggggagtt 360
            |||||| |||||||||||||||||||| ||||| ||| | ||||||| ||| || |||||
Sbjct: 1518 gagcactgaccttgatacctttggacacctgactgaagacccaagtcatcgtggagagtt 1577

                                                                        
Query: 361  ctttctgttctatagctatgcaacagtggctggtggtccattgttgatggcgttggttgc 420
            ||||||||||||||| |||||||||||||| |||||||||||| |||||||  |||||||
Sbjct: 1578 ctttctgttctatagttatgcaacagtggccggtggtccattgctgatggcactggttgc 1637

                                                                        
Query: 421  tggtgaggctgcccacaactttgaaaccacgcctccaactgatgctgtcagctctgttct 480
            |||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 1638 tggtgaagctgcccacaactttgaaaccacaccccctactgatgctgtcagttctgttct 1697

                                                                        
Query: 481  tcagatactgaggggtatctatgaaacacagggagttgaggtaccagatcctctacagag 540
              |||||||||| |||||||||||| | || ||  ||||||| ||||||||||| |||||
Sbjct: 1698 caagatactgagaggtatctatgaacctcaaggtattgaggtcccagatcctctgcagag 1757

                                                                        
Query: 541  tgtttgcactagatggggcacagactctttcagtttaggttcatattcgcatgttgctgt 600
            |||||| |||||||||||||||||||| |||||| ||||||| ||||| |||||||||||
Sbjct: 1758 tgtttgtactagatggggcacagactccttcagtctaggttcgtattctcatgttgctgt 1817

                                             
Query: 601  tggagcatctggagatgactatgacatattagc 633
            |||||||||||||||||||||||||||| ||||
Sbjct: 1818 tggagcatctggagatgactatgacatactagc 1850



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>ref|XM_473484.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2436

 Score =  712 bits (359), Expect = 0.0
 Identities = 566/633 (89%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    actgcttcctgcctggtggcaacgggnggcttgtacaggccctggcagnanaatgtgccc 60
            |||| ||| ||||||| ||||| ||  ||||||| ||| ||||||||| | |||||||| 
Sbjct: 1157 actgtttcttgcctggcggcaatggtaggcttgtgcagtccctggcag-agaatgtgccg 1215

                                                                        
Query: 61   attgtttacgagnaggacagcgcacactatacggtatggaggggatggcgtgcaggtggt 120
            |||||||||||| ||||||| |||||||||||| |||||||||||||| || ||||||||
Sbjct: 1216 attgtttacgag-aggacagtgcacactatacgttatggaggggatggggttcaggtggt 1274

                                                                        
Query: 121  tgttaatggtggtcaggtgtatgaaggagacatggcgctgtgcactgtgccacttggggt 180
            ||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1275 tgtcaatggtgggcaggtgtatgaaggcgacatggcgctgtgcactgttccacttggggt 1334

                                                                        
Query: 181  tctgaaaaatgggggtatcaagtttgtacctgagctgccacaaaggaagcttgatagtat 240
            |||||||||||| ||  ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1335 tctgaaaaatggtggcgtcaagtttgtacctgagctgccacagagaaaacttgatagtat 1394

                                                                        
Query: 241  caagaaactaggctttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttg 300
             || | |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 1395 taaaagactaggctttgggttgttgaacaaggttgcaatgttgtttcctcatgttttctg 1454

                                                                        
Query: 301  gagcaccgaccttgatacctttggacatctgaccgaaaatccaagtcgtcgaggggagtt 360
            |||||| |||||||||||||||||||| ||||| ||| | ||||||| ||| || |||||
Sbjct: 1455 gagcactgaccttgatacctttggacacctgactgaagacccaagtcatcgtggagagtt 1514

                                                                        
Query: 361  ctttctgttctatagctatgcaacagtggctggtggtccattgttgatggcgttggttgc 420
            ||||||||||||||| |||||||||||||| |||||||||||| |||||||  |||||||
Sbjct: 1515 ctttctgttctatagttatgcaacagtggccggtggtccattgctgatggcactggttgc 1574

                                                                        
Query: 421  tggtgaggctgcccacaactttgaaaccacgcctccaactgatgctgtcagctctgttct 480
            |||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 1575 tggtgaagctgcccacaactttgaaaccacaccccctactgatgctgtcagttctgttct 1634

                                                                        
Query: 481  tcagatactgaggggtatctatgaaacacagggagttgaggtaccagatcctctacagag 540
              |||||||||| |||||||||||| | || ||  ||||||| ||||||||||| |||||
Sbjct: 1635 caagatactgagaggtatctatgaacctcaaggtattgaggtcccagatcctctgcagag 1694

                                                                        
Query: 541  tgtttgcactagatggggcacagactctttcagtttaggttcatattcgcatgttgctgt 600
            |||||| |||||||||||||||||||| |||||| ||||||| ||||| |||||||||||
Sbjct: 1695 tgtttgtactagatggggcacagactccttcagtctaggttcgtattctcatgttgctgt 1754

                                             
Query: 601  tggagcatctggagatgactatgacatattagc 633
            |||||||||||||||||||||||||||| ||||
Sbjct: 1755 tggagcatctggagatgactatgacatactagc 1787



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>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
             complete sequence
          Length = 147806

 Score =  545 bits (275), Expect = e-152
 Identities = 443/497 (89%), Gaps = 2/497 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     actgcttcctgcctggtggcaacgggnggcttgtacaggccctggcagnanaatgtgccc 60
             |||| ||| ||||||| ||||| ||  ||||||| ||| ||||||||| | |||||||| 
Sbjct: 49659 actgtttcttgcctggcggcaatggtaggcttgtgcagtccctggcag-agaatgtgccg 49601

                                                                         
Query: 61    attgtttacgagnaggacagcgcacactatacggtatggaggggatggcgtgcaggtggt 120
             |||||||||||| ||||||| |||||||||||| |||||||||||||| || ||||||||
Sbjct: 49600 attgtttacgag-aggacagtgcacactatacgttatggaggggatggggttcaggtggt 49542

                                                                         
Query: 121   tgttaatggtggtcaggtgtatgaaggagacatggcgctgtgcactgtgccacttggggt 180
             ||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 49541 tgtcaatggtgggcaggtgtatgaaggcgacatggcgctgtgcactgttccacttggggt 49482

                                                                         
Query: 181   tctgaaaaatgggggtatcaagtttgtacctgagctgccacaaaggaagcttgatagtat 240
             |||||||||||| ||  ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 49481 tctgaaaaatggtggcgtcaagtttgtacctgagctgccacagagaaaacttgatagtat 49422

                                                                         
Query: 241   caagaaactaggctttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttg 300
              || | |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 49421 taaaagactaggctttgggttgttgaacaaggttgcaatgttgtttcctcatgttttctg 49362

                                                                         
Query: 301   gagcaccgaccttgatacctttggacatctgaccgaaaatccaagtcgtcgaggggagtt 360
             |||||| |||||||||||||||||||| ||||| ||| | ||||||| ||| || |||||
Sbjct: 49361 gagcactgaccttgatacctttggacacctgactgaagacccaagtcatcgtggagagtt 49302

                                                                         
Query: 361   ctttctgttctatagctatgcaacagtggctggtggtccattgttgatggcgttggttgc 420
             ||||||||||||||| |||||||||||||| |||||||||||| |||||||  |||||||
Sbjct: 49301 ctttctgttctatagttatgcaacagtggccggtggtccattgctgatggcactggttgc 49242

                                                                         
Query: 421   tggtgaggctgcccacaactttgaaaccacgcctccaactgatgctgtcagctctgttct 480
             |||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 49241 tggtgaagctgcccacaactttgaaaccacaccccctactgatgctgtcagttctgttct 49182

                              
Query: 481   tcagatactgaggggta 497
               |||||||||| ||||
Sbjct: 49181 caagatactgagaggta 49165



 Score =  174 bits (88), Expect = 2e-40
 Identities = 127/140 (90%)
 Strand = Plus / Minus

                                                                         
Query: 494   ggtatctatgaaacacagggagttgaggtaccagatcctctacagagtgtttgcactaga 553
             |||||||||||| | || ||  ||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 48842 ggtatctatgaacctcaaggtattgaggtcccagatcctctgcagagtgtttgtactaga 48783

                                                                         
Query: 554   tggggcacagactctttcagtttaggttcatattcgcatgttgctgttggagcatctgga 613
             |||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 48782 tggggcacagactccttcagtctaggttcgtattctcatgttgctgttggagcatctgga 48723

                                 
Query: 614   gatgactatgacatattagc 633
             ||||||||||||||| ||||
Sbjct: 48722 gatgactatgacatactagc 48703



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  545 bits (275), Expect = e-152
 Identities = 443/497 (89%), Gaps = 2/497 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        actgcttcctgcctggtggcaacgggnggcttgtacaggccctggcagnanaatgtgccc 60
                |||| ||| ||||||| ||||| ||  ||||||| ||| ||||||||| | |||||||| 
Sbjct: 28042433 actgtttcttgcctggcggcaatggtaggcttgtgcagtccctggcag-agaatgtgccg 28042375

                                                                            
Query: 61       attgtttacgagnaggacagcgcacactatacggtatggaggggatggcgtgcaggtggt 120
                |||||||||||| ||||||| |||||||||||| |||||||||||||| || ||||||||
Sbjct: 28042374 attgtttacgag-aggacagtgcacactatacgttatggaggggatggggttcaggtggt 28042316

                                                                            
Query: 121      tgttaatggtggtcaggtgtatgaaggagacatggcgctgtgcactgtgccacttggggt 180
                ||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 28042315 tgtcaatggtgggcaggtgtatgaaggcgacatggcgctgtgcactgttccacttggggt 28042256

                                                                            
Query: 181      tctgaaaaatgggggtatcaagtttgtacctgagctgccacaaaggaagcttgatagtat 240
                |||||||||||| ||  ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 28042255 tctgaaaaatggtggcgtcaagtttgtacctgagctgccacagagaaaacttgatagtat 28042196

                                                                            
Query: 241      caagaaactaggctttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttg 300
                 || | |||||||||||||||||| ||||||||||| ||||||||||||||||| || ||
Sbjct: 28042195 taaaagactaggctttgggttgttgaacaaggttgcaatgttgtttcctcatgttttctg 28042136

                                                                            
Query: 301      gagcaccgaccttgatacctttggacatctgaccgaaaatccaagtcgtcgaggggagtt 360
                |||||| |||||||||||||||||||| ||||| ||| | ||||||| ||| || |||||
Sbjct: 28042135 gagcactgaccttgatacctttggacacctgactgaagacccaagtcatcgtggagagtt 28042076

                                                                            
Query: 361      ctttctgttctatagctatgcaacagtggctggtggtccattgttgatggcgttggttgc 420
                ||||||||||||||| |||||||||||||| |||||||||||| |||||||  |||||||
Sbjct: 28042075 ctttctgttctatagttatgcaacagtggccggtggtccattgctgatggcactggttgc 28042016

                                                                            
Query: 421      tggtgaggctgcccacaactttgaaaccacgcctccaactgatgctgtcagctctgttct 480
                |||||| ||||||||||||||||||||||| || || |||||||||||||| ||||||||
Sbjct: 28042015 tggtgaagctgcccacaactttgaaaccacaccccctactgatgctgtcagttctgttct 28041956

                                 
Query: 481      tcagatactgaggggta 497
                  |||||||||| ||||
Sbjct: 28041955 caagatactgagaggta 28041939



 Score =  174 bits (88), Expect = 2e-40
 Identities = 127/140 (90%)
 Strand = Plus / Minus

                                                                            
Query: 494      ggtatctatgaaacacagggagttgaggtaccagatcctctacagagtgtttgcactaga 553
                |||||||||||| | || ||  ||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 28041616 ggtatctatgaacctcaaggtattgaggtcccagatcctctgcagagtgtttgtactaga 28041557

                                                                            
Query: 554      tggggcacagactctttcagtttaggttcatattcgcatgttgctgttggagcatctgga 613
                |||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||||||||
Sbjct: 28041556 tggggcacagactccttcagtctaggttcgtattctcatgttgctgttggagcatctgga 28041497

                                    
Query: 614      gatgactatgacatattagc 633
                ||||||||||||||| ||||
Sbjct: 28041496 gatgactatgacatactagc 28041477



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>ref|NM_111874.1| Arabidopsis thaliana FLD (FLOWERING LOCUS D); amine oxidase/
            oxidoreductase AT3G10390 (FLD) mRNA, complete cds
          Length = 2370

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 154/194 (79%)
 Strand = Plus / Plus

                                                                        
Query: 227  aagcttgatagtatcaagaaactaggctttgggttgttaaacaaggttgcgatgttgttt 286
            ||||||||| |||| |||| | |||| ||||||||  | || || ||||| ||| | |||
Sbjct: 1339 aagcttgattgtataaagagattaggttttgggttactgaataaagttgcaatgctcttt 1398

                                                                        
Query: 287  cctcatgtgttttggagcaccgaccttgatacctttggacatctgaccgaaaatccaagt 346
            ||  |||| ||||||||||| || || ||||||||||| ||||| || ||  |||| |  
Sbjct: 1399 ccgtatgtattttggagcacagatctcgatacctttgggcatcttactgaggatccgaac 1458

                                                                        
Query: 347  cgtcgaggggagttctttctgttctatagctatgcaacagtggctggtggtccattgttg 406
              |||||| || |||||||||||||||||||| ||| | || ||||||||| |  | |||
Sbjct: 1459 tatcgaggtgaattctttctgttctatagctacgcaccggttgctggtggtgctctcttg 1518

                          
Query: 407  atggcgttggttgc 420
            || |||||||||||
Sbjct: 1519 atcgcgttggttgc 1532



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>gb|AY849997.1| Arabidopsis thaliana ecotype Lz-0 flowering locus D (FLD) gene,
            complete cds
          Length = 3321

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 154/194 (79%)
 Strand = Plus / Plus

                                                                        
Query: 227  aagcttgatagtatcaagaaactaggctttgggttgttaaacaaggttgcgatgttgttt 286
            ||||||||| |||| |||| | |||| ||||||||  | || || ||||| ||| | |||
Sbjct: 2102 aagcttgattgtataaagagattaggttttgggttactgaataaagttgcaatgctcttt 2161

                                                                        
Query: 287  cctcatgtgttttggagcaccgaccttgatacctttggacatctgaccgaaaatccaagt 346
            ||  |||| ||||||||||| || || ||||||||||| ||||| || ||  |||| |  
Sbjct: 2162 ccgtatgtattttggagcacagatctcgatacctttgggcatcttactgaggatccgaac 2221

                                                                        
Query: 347  cgtcgaggggagttctttctgttctatagctatgcaacagtggctggtggtccattgttg 406
              |||||| || |||||||||||||||||||| ||| | || ||||||||| |  | |||
Sbjct: 2222 tatcgaggtgaattctttctgttctatagctacgcaccggttgctggtggtgctctcttg 2281

                          
Query: 407  atggcgttggttgc 420
            || |||||||||||
Sbjct: 2282 atcgcgttggttgc 2295



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>gb|AY849996.1| Arabidopsis thaliana ecotype Landsberg erecta flowering locus D (FLD)
            gene, complete cds
          Length = 3322

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 154/194 (79%)
 Strand = Plus / Plus

                                                                        
Query: 227  aagcttgatagtatcaagaaactaggctttgggttgttaaacaaggttgcgatgttgttt 286
            ||||||||| |||| |||| | |||| ||||||||  | || || ||||| ||| | |||
Sbjct: 2103 aagcttgattgtataaagagattaggttttgggttactgaataaagttgcaatgctcttt 2162

                                                                        
Query: 287  cctcatgtgttttggagcaccgaccttgatacctttggacatctgaccgaaaatccaagt 346
            ||  |||| ||||||||||| || || ||||||||||| ||||| || ||  |||| |  
Sbjct: 2163 ccgtatgtattttggagcacagatctcgatacctttgggcatcttactgaggatccgaac 2222

                                                                        
Query: 347  cgtcgaggggagttctttctgttctatagctatgcaacagtggctggtggtccattgttg 406
              |||||| || |||||||||||||||||||| ||| | || ||||||||| |  | |||
Sbjct: 2223 tatcgaggtgaattctttctgttctatagctacgcaccggttgctggtggtgctctcttg 2282

                          
Query: 407  atggcgttggttgc 420
            || |||||||||||
Sbjct: 2283 atcgcgttggttgc 2296



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>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete
              sequence
          Length = 118107

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 154/194 (79%)
 Strand = Plus / Minus

                                                                          
Query: 227    aagcttgatagtatcaagaaactaggctttgggttgttaaacaaggttgcgatgttgttt 286
              ||||||||| |||| |||| | |||| ||||||||  | || || ||||| ||| | |||
Sbjct: 116726 aagcttgattgtataaagagattaggttttgggttactgaataaagttgcaatgctcttt 116667

                                                                          
Query: 287    cctcatgtgttttggagcaccgaccttgatacctttggacatctgaccgaaaatccaagt 346
              ||  |||| ||||||||||| || || ||||||||||| ||||| || ||  |||| |  
Sbjct: 116666 ccgtatgtattttggagcacagatctcgatacctttgggcatcttactgaggatccgaac 116607

                                                                          
Query: 347    cgtcgaggggagttctttctgttctatagctatgcaacagtggctggtggtccattgttg 406
                |||||| || |||||||||||||||||||| ||| | || ||||||||| |  | |||
Sbjct: 116606 tatcgaggtgaattctttctgttctatagctacgcaccggttgctggtggtgctctcttg 116547

                            
Query: 407    atggcgttggttgc 420
              || |||||||||||
Sbjct: 116546 atcgcgttggttgc 116533



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>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence
          Length = 157468

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 254    tttgggttgttaaacaaggttgcgatgttgtttcc 288
              ||||||||||| ||||||||||| |||||||||||
Sbjct: 151102 tttgggttgttgaacaaggttgcaatgttgtttcc 151068



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 591    atgttgctgttggagcatctggagatgactatgacat 627
              |||||||||||||| | || |||||||| ||||||||
Sbjct: 150765 atgttgctgttggatcttcaggagatgattatgacat 150729



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>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence,
           complete sequence
          Length = 87937

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 84/104 (80%)
 Strand = Plus / Minus

                                                                       
Query: 227 aagcttgatagtatcaagaaactaggctttgggttgttaaacaaggttgcgatgttgttt 286
           ||||||||| |||| |||| | |||| ||||||||  | || || ||||| ||| | |||
Sbjct: 135 aagcttgattgtataaagagattaggttttgggttactgaataaagttgcaatgctcttt 76

                                                       
Query: 287 cctcatgtgttttggagcaccgaccttgatacctttggacatct 330
           ||  |||| ||||||||||| || || ||||||||||| |||||
Sbjct: 75  ccgtatgtattttggagcacagatctcgatacctttgggcatct 32



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>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 238   tatcaagaaactaggctttggg 259
             ||||||||||||||||||||||
Sbjct: 51443 tatcaagaaactaggctttggg 51464



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>ref|XM_480049.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2264

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 254  tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
            ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 1108 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 1155



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>ref|XM_480050.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2722

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 254  tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
            ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 1348 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 1395



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>gb|AY695112.1| Pseudomonas luteola beta-lactamase precursor Lut-1 gene, complete
           cds
          Length = 891

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 445 aaccacgcctccaactgatgctgt 468
           |||||||||| |||||||||||||
Sbjct: 650 aaccacgcctgcaactgatgctgt 627



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>gb|AY448016.1|AY448010S7 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR7
          Length = 55205

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   gatagtatcaagaaactagg 252
             ||||||||||||||||||||
Sbjct: 10428 gatagtatcaagaaactagg 10447



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>emb|AL450267.10| Human DNA sequence from clone RP11-344B23 on chromosome 9 Contains the 3'
              end of the PAX5 gene for paired box gene 5 (B-cell lineage
              specific activator protein) (BSAP), complete sequence
          Length = 125110

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    tcagctctgttcttcagata 487
              ||||||||||||||||||||
Sbjct: 121535 tcagctctgttcttcagata 121554



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>emb|AL445493.8| Human DNA sequence from clone RP11-164O23 on chromosome 1 Contains two
              novel genes, the PFKFB2 gene for
              6-phosphofructo-2-kinase/fructose-2 6-biphosphatase 2, the
              C4BPB gene for complement component 4 binding protein beta,
              the C4BPA gene for complement component 4 binding protein
              alpha, a novel pseudogene and a complement component 4
              binding protein pseudogene, complete sequence
          Length = 158939

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    tgttgtttcctcatgtgttt 298
              ||||||||||||||||||||
Sbjct: 118879 tgttgtttcctcatgtgttt 118898



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>emb|AL357503.12| Human DNA sequence from clone RP5-899C14 on chromosome 20 Contains the 3'
              end of the C20orf101 gene, complete sequence
          Length = 133288

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 611    ggagatgactatgacatatt 630
              ||||||||||||||||||||
Sbjct: 109115 ggagatgactatgacatatt 109096



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>ref|NM_026937.1| Mus musculus activating signal cointegrator 1 complex subunit 1
           (Ascc1), mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 174 ttggggttctgaaaaatgggggtatcaa 201
           ||||||||||||||||||| | ||||||
Sbjct: 617 ttggggttctgaaaaatggtgctatcaa 590



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>dbj|AK139944.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020041B07 product:activating signal cointegrator
           1 complex subunit 1, full insert sequence
          Length = 1492

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 174 ttggggttctgaaaaatgggggtatcaa 201
           ||||||||||||||||||| | ||||||
Sbjct: 638 ttggggttctgaaaaatggtgctatcaa 611



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>gb|AC152929.2| Xenopus tropicalis clone ISB1-11B9, complete sequence
          Length = 68368

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   ttcagatactgaggggtatc 499
             ||||||||||||||||||||
Sbjct: 59456 ttcagatactgaggggtatc 59475



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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 182     ctgaaaaatgggggtatcaa 201
               ||||||||||||||||||||
Sbjct: 2942435 ctgaaaaatgggggtatcaa 2942416



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>dbj|AK007519.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810015P09 product:CGI-18
           PROTEIN (ASC-1 COMPLEX SUBUNIT P50) homolog [Homo
           sapiens], full insert sequence
          Length = 1466

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 174 ttggggttctgaaaaatgggggtatcaa 201
           ||||||||||||||||||| | ||||||
Sbjct: 635 ttggggttctgaaaaatggtgctatcaa 608



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 254     tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
               ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 2381586 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 2381539



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>gb|AC096718.3| Homo sapiens BAC clone RP11-10P19 from 4, complete sequence
          Length = 166745

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   ttgtttcctcatgtgttttg 300
             ||||||||||||||||||||
Sbjct: 60369 ttgtttcctcatgtgttttg 60388



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>dbj|AK179536.1| Mus musculus cDNA, clone:Y0G0110M15, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000050516, based on BLAT search
          Length = 212

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 174 ttggggttctgaaaaatgggggtatcaa 201
           ||||||||||||||||||| | ||||||
Sbjct: 151 ttggggttctgaaaaatggtgctatcaa 124



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>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0025F03
          Length = 138042

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 254   tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
             ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 57556 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 57509



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>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0473D02
          Length = 146185

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 254    tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
              ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 129085 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 129038



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>dbj|AK120532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128B21, full
            insert sequence
          Length = 2722

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 254  tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
            ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 1348 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 1395



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>emb|CT573339.6| M.truncatula DNA sequence from clone MTH2-82H11 on chromosome 3,
             complete sequence
          Length = 107004

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 266   aacaaggttgcgatgttgtttcctcatgtgttttgg 301
             ||||| ||||| ||| | ||||||||||||||||||
Sbjct: 58691 aacaaagttgcaatggtttttcctcatgtgttttgg 58726



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>dbj|AK066792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079C13, full
            insert sequence
          Length = 2264

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                            
Query: 254  tttgggttgttaaacaaggttgcgatgttgtttcctcatgtgttttgg 301
            ||||||||||| ||||| || || ||| ||||||| ||||| ||||||
Sbjct: 1108 tttgggttgttgaacaaagtcgccatggtgtttccccatgtattttgg 1155



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>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 210862

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 174   ttggggttctgaaaaatgggggtatcaa 201
             ||||||||||||||||||| | ||||||
Sbjct: 48955 ttggggttctgaaaaatggtgctatcaa 48982



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>emb|AL772130.15| Mouse DNA sequence from clone RP23-230O14 on chromosome 4, complete
             sequence
          Length = 72407

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   ggttgcgatgttgtttcctc 290
             ||||||||||||||||||||
Sbjct: 66115 ggttgcgatgttgtttcctc 66134



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>gb|BC030905.1| Mus musculus activating signal cointegrator 1 complex subunit 1,
           mRNA (cDNA clone MGC:31553 IMAGE:4503445), complete cds
          Length = 1524

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 174 ttggggttctgaaaaatgggggtatcaa 201
           ||||||||||||||||||| | ||||||
Sbjct: 617 ttggggttctgaaaaatggtgctatcaa 590


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,203,392
Number of Sequences: 3902068
Number of extensions: 5203392
Number of successful extensions: 92471
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92355
Number of HSP's gapped (non-prelim): 111
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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