>YCF45_PORPU (P51281) Hypothetical 64.2 kDa protein ycf45 (ORF565)|
          Length = 565

 Score =  117 bits (293), Expect(2) = 1e-29
 Identities = 60/103 (58%), Positives = 76/103 (73%)
 Frame = +2

Query: 299 VGDLGRQPEARFLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIR 478
           V DLGR+PEARF GN   +YL    IS  +L+   + VG F  DNRAGIE TLHRIS++R
Sbjct: 35  VMDLGRRPEARFPGNP--EYLSQRSISWQDLDYCVKKVGNFSGDNRAGIEKTLHRISSMR 92

Query: 479 SRKGLVVGLTCRVGRAVNGHVDMVRDLLNYKESILFLGRPGVG 607
           +R+G ++GLTCRVGRAV G + ++RDLL   +SIL LG+PGVG
Sbjct: 93  NREGSIIGLTCRVGRAVFGTISIIRDLLEQGDSILLLGKPGVG 135



 Score = 32.0 bits (71), Expect(2) = 1e-29
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 207 VVIEDDLSELLQILPKDLRDNLQNEPRRDQLLEI 308
           ++I DDL +LL+ILP  +R+ L+    R  L+E+
Sbjct: 1   MLIADDLEKLLEILPHFVREPLKQHSNRKNLIEV 34

>YCF45_ODOSI (P49540) Hypothetical 51.9 kDa protein ycf45 (ORF455)|
          Length = 455

 Score =  109 bits (272), Expect = 7e-24
 Identities = 55/101 (54%), Positives = 72/101 (71%)
 Frame = +2

Query: 305 DLGRQPEARFLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSR 484
           DLGR+PEARF   +G +YL    IS  ++    + + +F  DNRAGIE TLHRIS IR+R
Sbjct: 37  DLGRRPEARF--TTGPEYLSQKVISWQDINHFTKRISKFSNDNRAGIERTLHRISCIRNR 94

Query: 485 KGLVVGLTCRVGRAVNGHVDMVRDLLNYKESILFLGRPGVG 607
           + L+ GLTCR+GRA+ G +  VRDLL  ++SIL LG+PGVG
Sbjct: 95  QFLINGLTCRIGRAIFGTISSVRDLLESQQSILLLGKPGVG 135

>YCF45_CYACA (O19920) Hypothetical 37.9 kDa protein ycf45|
          Length = 335

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 43/101 (42%), Positives = 62/101 (61%)
 Frame = +2

Query: 305 DLGRQPEARFLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSR 484
           D GR+ E R+   +  + L   +I++  L    + +G F  DNRAGI  TLHRIS I++R
Sbjct: 37  DNGRRAEGRWREKT--ENLTHKKITKKHLLRCIKKIGIFNEDNRAGIYQTLHRISCIKNR 94

Query: 485 KGLVVGLTCRVGRAVNGHVDMVRDLLNYKESILFLGRPGVG 607
            G +VGLT R+GR   G   ++RDL+   +S L +GRPG+G
Sbjct: 95  YGNIVGLTYRIGREFIGIGPIIRDLIESNQSTLLIGRPGIG 135

>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-8) (Irregular xylem protein 1)
           (AtIRX1)
          Length = 985

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 25/92 (27%), Positives = 42/92 (45%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLG SG + +  NE+ +L     ++  G +    +AG E  L R+SA+ +    ++ L C
Sbjct: 413 FLGYSGARDIEGNELPRLVYVSREKRPG-YQHHKKAGAENALVRVSAVLTNAPFILNLDC 471

Query: 512 RVGRAVNGHVDMVRDLLNYKESILFLGRPGVG 607
                       V +    +E++ FL  P VG
Sbjct: 472 D---------HYVNNSKAVREAMCFLMDPVVG 494

>RYR1_PIG (P16960) Ryanodine receptor 1 (Skeletal muscle-type ryanodine|
            receptor) (RyR1) (RYR-1) (Skeletal muscle calcium release
            channel)
          Length = 5035

 Score = 33.5 bits (75), Expect = 0.50
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = +2

Query: 338  GNSGGQYLRDNEISQLELE-EAQRAVGEFGR-DNRAGIEGTLHRISAIRSRKGLVVGLTC 511
            G   G+   + E+S  E E E QR + +  R  NR   E  L  ISA +   G +V  T 
Sbjct: 3734 GGENGEAQEEVEVSFEEKEMEKQRLLYQQARLHNRGAAEMVLQMISACKGETGAMVSSTL 3793

Query: 512  RVGRAV--NGHVDMVRDLLNY 568
            ++G ++   G+ D+ + +L+Y
Sbjct: 3794 KLGISILNGGNADVQQKMLDY 3814

>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1
           protein 1) (Isoxaben resistant protein 1) (Ath-B)
          Length = 1065

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/92 (26%), Positives = 44/92 (47%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLG +GG     NE+ +L     ++  G F    +AG    L R+SA+ +    ++ L C
Sbjct: 488 FLGQNGGLDAEGNELPRLVYVSREKRPG-FQHHKKAGAMNALVRVSAVLTNGPFILNLDC 546

Query: 512 RVGRAVNGHVDMVRDLLNYKESILFLGRPGVG 607
                 + +++  + L   +E++ FL  P +G
Sbjct: 547 ------DHYINNSKAL---REAMCFLMDPNLG 569

>ANTP_DROME (P02833) Homeotic protein antennapedia|
          Length = 378

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 89  PHLHPTHPESHTPATRQAAAQSLGRHCPLRP 181
           P +H  HP  HTP ++   +QS G   PL P
Sbjct: 255 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYP 285

>DOPR2_DROME (Q24563) Dopamine receptor 2|
          Length = 539

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/35 (48%), Positives = 19/35 (54%)
 Frame = +3

Query: 153 AWAGTARCAPEAAGGGGFVVIEDDLSELLQILPKD 257
           A + T   A  A GGGG    E DLSE L+ LP D
Sbjct: 73  ATSATLSPAMVATGGGGTTTPEPDLSEFLEALPND 107

>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-5)
          Length = 1069

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLGN+G + + +NE+ +L     ++  G F    +AG   +L R+S + S    ++ + C
Sbjct: 493 FLGNNGVRDVENNELPRLVYVSREKRPG-FDHHKKAGAMNSLIRVSGVLSNAPYLLNVDC 551

>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)|
          Length = 1655

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +2

Query: 434 RAGIEGTLHRISAIRSRKGLVVGLTCRVGR------AVNGHVDMVRDLLNYKESI 580
           +A  +G +  +S + + +GL +  +C  G       A NGH D VR LLN +  +
Sbjct: 707 QAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQV 761

>NCA12_HUMAN (P13592) Neural cell adhesion molecule 1, 120 kDa isoform precursor|
           (N-CAM 120) (NCAM-120) (CD56 antigen)
          Length = 761

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 268 LSRKSLGRICRSSERSSSMTTKPPPPAASGAQRAVP 161
           L+ K LG I  +SE  +     PPPPA++ +   VP
Sbjct: 579 LNGKGLGEISAASEFKTQPVHSPPPPASASSSTPVP 614

>CTTB2_HORSE (Q2QLA2) Cortactin-binding protein 2 (CortBP2)|
          Length = 1665

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +2

Query: 434 RAGIEGTLHRISAIRSRKGLVVGLTCRVGR------AVNGHVDMVRDLLNYKESI 580
           +A  +G +  +S + + +GL +  +C  G       A NGH D VR LLN +  +
Sbjct: 717 QAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQV 771

>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13)
          Length = 1065

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLG+SGG     NE+ +L     ++  G F    +AG    L R+SA+ +    ++ + C
Sbjct: 491 FLGHSGGLDTDGNELPRLIYVSREKRPG-FQHHKKAGAMNALIRVSAVLTNGAYLLNVDC 549

>CTTB2_MICMU (Q2QL82) Cortactin-binding protein 2 (CortBP2)|
          Length = 1647

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = +2

Query: 434 RAGIEGTLHRISAIRSRKGLVVGLTCRVGR------AVNGHVDMVRDLLNYKESI 580
           +A  +G +  +S + + +GL +  +C  G       A NGH D VR LLN +  +
Sbjct: 702 QAAAQGNVTLLSMLLNEEGLDINYSCEDGHSALYSAAKNGHTDCVRLLLNAEAQV 756

>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
           (AtRSW1)
          Length = 1081

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLG+SGG     NE+ +L     ++  G F    +AG    L R+SA+ +    ++ + C
Sbjct: 504 FLGHSGGLDTDGNELPRLIYVSREKRPG-FQHHKKAGAMNALIRVSAVLTNGAYLLNVDC 562

>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-2) (Ath-A)
          Length = 1084

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLG+SG +    NE+ +L     ++  G F    +AG   +L R+SA+ S    ++ + C
Sbjct: 506 FLGHSGVRDTDGNELPRLVYVSREKRPG-FDHHKKAGAMNSLIRVSAVLSNAPYLLNVDC 564

>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-9)
          Length = 1088

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +2

Query: 332 FLGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTC 511
           FLG+SG   +  NE+ +L     ++  G F    +AG   +L R+SA+ S    ++ + C
Sbjct: 511 FLGHSGVCDMDGNELPRLVYVSREKRPG-FDHHKKAGAMNSLIRVSAVLSNAPYLLNVDC 569

>NPR1_YEAST (P22211) Nitrogen permease reactivator protein (EC 2.7.11.1)|
          Length = 790

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
 Frame = +3

Query: 189 AGGGGFVVIEDDLSELLQILPKDLRDNLQNEPRRDQLLEIW-----GDNLRHVSLVILVA 353
           AG GG V +   +S+      K+ R   +NE +RD + +I      G  L H +++  + 
Sbjct: 446 AGAGGSVKLAQRISDNKIFAVKEFRTKFENESKRDYVKKITSEYCIGTTLNHPNIIETIE 505

Query: 354 SIY 362
            +Y
Sbjct: 506 IVY 508

>FUMB_ECOLI (P14407) Fumarate hydratase class I, anaerobic (EC 4.2.1.2)|
           (Fumarase)
          Length = 548

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = +2

Query: 338 GNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCRV 517
           GN  GQ  RD ++ Q  LEEAQ+     G   + G +   H I  IR  +    G +C V
Sbjct: 260 GNEHGQAFRDVQLEQELLEEAQK----LGLGAQFGGKYFAHDIRVIRLPRH---GASCPV 312

Query: 518 GRAVNGHVD 544
           G  V+   D
Sbjct: 313 GMGVSCSAD 321

>ERF2_SCHPO (O74718) Eukaryotic peptide chain release factor GTP-binding|
           subunit (ERF2) (Translation release factor 3)
           (Polypeptide release factor 3) (ERF3) (ERF-3)
          Length = 662

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 27/103 (26%), Positives = 38/103 (36%)
 Frame = -1

Query: 606 PTPGLPKNRMLSL*FKRSRTISTCPLTARPTRQVKPTTSPFLLLMADILCNVPSIPARLS 427
           P P +PK ++LSL    S   ST P++        PTT+             P+ PA  S
Sbjct: 109 PKPAIPKGKVLSLGGNTSAPKSTKPISISLGGTKAPTTTK------------PAAPAAQS 156

Query: 426 RPNSPTAL*AXXXXXXXXXXSRRYWPPELPRKRASGCLPKSPT 298
           +  +P                    P E P K A   L K+P+
Sbjct: 157 KTETPAPKVTSESTKKETAAPP---PQETPTKSADAELAKTPS 196

>PURQ_LACAC (Q5FIV0) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)|
           (FGAM synthase I)
          Length = 223

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = +2

Query: 335 LGNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCR 514
           + +  G Y  D  + + ELE+  + V  +  +N     G+LH I+ I +++G V+G+   
Sbjct: 140 IAHGDGSYYADENVLE-ELEDNHQVVFRYHGENP---NGSLHDIAGICNKEGNVLGMMPH 195

Query: 515 VGRAV 529
             RAV
Sbjct: 196 PERAV 200

>Y906_METJA (Q58316) Hypothetical protein MJ0906|
          Length = 366

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = +3

Query: 192 GGGGFVVIEDDLSELLQILPKDLRDNLQNEPRRDQLLEIWGDNLRHVSLVILVASI 359
           GGG F + +DD   L +I+ + + D + +E +  + +E+  + + ++S  +LV  I
Sbjct: 13  GGGSFEIGDDDSKILDEIISEVINDIMPSEIKLKKKIEMIDNTIEYLSYELLVTFI 68

>BSH_DROME (Q04787) Brain-specific homeobox protein|
          Length = 427

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
 Frame = +2

Query: 83  SNPHLHPTH----PESHTPATRQAAAQSLGR 163
           +NPH HP+     P+SH PA+  A+A +  R
Sbjct: 94  NNPHKHPSQHSHPPQSHPPASASASATATAR 124

>DMRT1_PIG (Q9TT01) Doublesex- and mab-3-related transcription factor 1|
          Length = 373

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -3

Query: 241 CRSSERSSSMTTKPPPPAASGAQRAVP 161
           C  +E SSS    PPPPAAS    A P
Sbjct: 152 CLMTESSSSSQPPPPPPAASTPTTAAP 178

>RY44_DROME (Q24498) Ryanodine receptor 44F|
          Length = 5127

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +2

Query: 338  GNSGGQYLRDNEISQLELEEAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCRV 517
            G  GG+      I + E+E+ +    +    NR   E  L  ISA +     +V  T  +
Sbjct: 3877 GGEGGEEGEGTSIHEQEMEKQKLLFHQARLSNRGVAEMVLLHISASKGIPSEMVMTTLNL 3936

Query: 518  GRAV--NGHVDMVRDLLNY 568
            G A+   G++D+   +LN+
Sbjct: 3937 GIAILRGGNIDIQMGMLNH 3955

>AFF3_HUMAN (P51826) AF4/FMR2 family member 3 (LAF-4 protein) (Lymphoid nuclear|
           protein related to AF4)
          Length = 1227

 Score = 29.3 bits (64), Expect = 9.4
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = -2

Query: 431 CHVQILLQLSELPPALAVKSHYPVDTGH--QNYQGNVPQVVSPNLQQLVPSRFI 276
           C+V++ LQ  E PPA+A K      +GH  QN+  ++     P+L Q  P+ ++
Sbjct: 187 CNVEVGLQTQERPPAMAAKHS---SSGHCVQNFPPSLAS--KPSLVQQKPTAYV 235


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,693,871
Number of Sequences: 219361
Number of extensions: 1563938
Number of successful extensions: 6227
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6198
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)