ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 268 2e-68
3emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb... 268 2e-68
4emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G2... 44 0.53
5ref|NM_179413.1| Arabidopsis thaliana ATP binding AT1G33290 tran... 42 2.1
6ref|NM_103058.2| Arabidopsis thaliana ATP binding / nucleoside-t... 42 2.1
7ref|NM_195751.1| Oryza sativa (japonica cultivar-group) unknown ... 42 2.1
8gb|BT014906.1| Arabidopsis thaliana At1g33290 gene, complete cds 42 2.1
9gb|BT015032.1| Arabidopsis thaliana At1g33290 mRNA, complete cds 42 2.1
10gb|AF452730.1| Rattus norvegicus synaptogenesis-related mRNA seq... 42 2.1
11gb|AC145818.1| Pan troglodytes BAC clone RP43-8O12 from 7, compl... 42 2.1
12gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, c... 42 2.1
13gb|AC027820.12| Homo sapiens chromosome 17, clone RP11-198F11, c... 42 2.1
14gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
15gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 geno... 42 2.1
16gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, compl... 42 2.1
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
18emb|BX816642.1|CNS0ABLB Arabidopsis thaliana Full-length cDNA Co... 42 2.1
19gb|AC147282.3| Pan troglodytes BAC clone RP43-86L11 from chromos... 42 2.1
20gb|AC145873.3| Pan troglodytes BAC clone RP43-20K16 from chromos... 42 2.1
21gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16... 42 2.1
22dbj|AK104034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
23dbj|AK071458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
24dbj|AK070152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
26gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, co... 40 8.3
27gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, c... 40 8.3
28gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, comp... 40 8.3
29gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.3
30gb|AC166969.4| Mus musculus chromosome 1, clone RP23-226P1, comp... 40 8.3
31ref|XM_807353.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 8.3
32gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, comple... 40 8.3
33ref|XM_786067.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.3
34emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.3
35emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.3
36gb|AC108081.2| Homo sapiens chromosome 16 clone CTC-661I16, comp... 40 8.3
37emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chr... 40 8.3
38emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in... 40 8.3

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Minus

                                                                           
Query: 372     agatttcacagctagagctggaggaagctcagagagctgtaggagaatttggacgtgaca 431
               |||| ||||||| |||  ||||||| || |||||||||||||||||||||||| ||||||
Sbjct: 5687345 agatctcacagcaagaattggaggaggcgcagagagctgtaggagaatttggaggtgaca 5687286

                                                                           
Query: 432     accgtgcaggaatcgaaggtacattgcataggatatctgccataaggagtagaaaaggac 491
               | ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| 
Sbjct: 5687285 atcgtgcaggaatcgaaggtacattacatagaatatctgccataaggagcagaaaaggaa 5687226

                                                                           
Query: 492     tggttgttggtttgacctgtcgagttggccgtgccgtcaatgggcatgttgatatggtcc 551
               ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 5687225 tggttgttggtttaacctgtcgagttggccgtgccgttactgggcatgttgatatggtcc 5687166

                                                  
Query: 552     gcgatcttttaaactacaaagagagcattctgttt 586
               | ||||| ||||| |||||||| |||||| |||||
Sbjct: 5687165 gtgatctcttaaattacaaagaaagcattttgttt 5687131



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                           
Query: 305     gatttggggagacaacctgaggcacgtttccttggtaattctggtggccagtatctacgg 364
               ||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 5687515 gatttggggagacgacctgaggcacgtttccttggtgactctggtggccaatatctacgg 5687456

                 
Query: 365     ga 366
               ||
Sbjct: 5687455 ga 5687454



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 238     tacagattctacccaaggatttacgagataatctgcagaatgaacctagaa 288
               ||||| ||||||| |  ||||| ||||||||||||||||||||||||||||
Sbjct: 5687693 tacaggttctaccaagagatttgcgagataatctgcagaatgaacctagaa 5687643



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Minus

                                                                           
Query: 372     agatttcacagctagagctggaggaagctcagagagctgtaggagaatttggacgtgaca 431
               |||| ||||||| |||  ||||||| || |||||||||||||||||||||||| ||||||
Sbjct: 5687338 agatctcacagcaagaattggaggaggcgcagagagctgtaggagaatttggaggtgaca 5687279

                                                                           
Query: 432     accgtgcaggaatcgaaggtacattgcataggatatctgccataaggagtagaaaaggac 491
               | ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| 
Sbjct: 5687278 atcgtgcaggaatcgaaggtacattacatagaatatctgccataaggagcagaaaaggaa 5687219

                                                                           
Query: 492     tggttgttggtttgacctgtcgagttggccgtgccgtcaatgggcatgttgatatggtcc 551
               ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 5687218 tggttgttggtttaacctgtcgagttggccgtgccgttactgggcatgttgatatggtcc 5687159

                                                  
Query: 552     gcgatcttttaaactacaaagagagcattctgttt 586
               | ||||| ||||| |||||||| |||||| |||||
Sbjct: 5687158 gtgatctcttaaattacaaagaaagcattttgttt 5687124



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                           
Query: 305     gatttggggagacaacctgaggcacgtttccttggtaattctggtggccagtatctacgg 364
               ||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 5687508 gatttggggagacgacctgaggcacgtttccttggtgactctggtggccaatatctacgg 5687449

                 
Query: 365     ga 366
               ||
Sbjct: 5687448 ga 5687447



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                  
Query: 238     tacagattctacccaaggatttacgagataatctgcagaatgaacctagaa 288
               ||||| ||||||| |  ||||| ||||||||||||||||||||||||||||
Sbjct: 5687686 tacaggttctaccaagagatttgcgagataatctgcagaatgaacctagaa 5687636



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>emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC OSJNBb0071I17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 159056

 Score =  268 bits (135), Expect = 2e-68
 Identities = 195/215 (90%)
 Strand = Plus / Minus

                                                                         
Query: 372   agatttcacagctagagctggaggaagctcagagagctgtaggagaatttggacgtgaca 431
             |||| ||||||| |||  ||||||| || |||||||||||||||||||||||| ||||||
Sbjct: 41868 agatctcacagcaagaattggaggaggcgcagagagctgtaggagaatttggaggtgaca 41809

                                                                         
Query: 432   accgtgcaggaatcgaaggtacattgcataggatatctgccataaggagtagaaaaggac 491
             | ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| 
Sbjct: 41808 atcgtgcaggaatcgaaggtacattacatagaatatctgccataaggagcagaaaaggaa 41749

                                                                         
Query: 492   tggttgttggtttgacctgtcgagttggccgtgccgtcaatgggcatgttgatatggtcc 551
             ||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 41748 tggttgttggtttaacctgtcgagttggccgtgccgttactgggcatgttgatatggtcc 41689

                                                
Query: 552   gcgatcttttaaactacaaagagagcattctgttt 586
             | ||||| ||||| |||||||| |||||| |||||
Sbjct: 41688 gtgatctcttaaattacaaagaaagcattttgttt 41654



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                         
Query: 305   gatttggggagacaacctgaggcacgtttccttggtaattctggtggccagtatctacgg 364
             ||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||
Sbjct: 42038 gatttggggagacgacctgaggcacgtttccttggtgactctggtggccaatatctacgg 41979

               
Query: 365   ga 366
             ||
Sbjct: 41978 ga 41977



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 238   tacagattctacccaaggatttacgagataatctgcagaatgaacctagaa 288
             ||||| ||||||| |  ||||| ||||||||||||||||||||||||||||
Sbjct: 42216 tacaggttctaccaagagatttgcgagataatctgcagaatgaacctagaa 42166



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>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33
             Contains the 5' end of the CHD5 gene for  chromodomain
             helicase DNA binding protein 5, the RPL22 gene for
             ribosomal protein L22, eight novel genes, the ICMT gene
             for isoprenylcysteine carboxyl methyltransferase, possible
             ortholog of rodent transcription factor HES-3, the 3' end
             of the gene for brain acyl-CoA hydrolase (BACH) and seven
             CpG islands, complete sequence
          Length = 166518

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 146   gctcagagcctgggcaggcactgccc 171
             ||||||||||||||||||| ||||||
Sbjct: 99837 gctcagagcctgggcaggccctgccc 99812



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>ref|NM_179413.1| Arabidopsis thaliana ATP binding AT1G33290 transcript variant
           AT1G33290.2 mRNA, complete cds
          Length = 1039

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 440 ggaatcgaaggtacattgcataggatatc 468
           ||||| |||||||||||||| ||||||||
Sbjct: 376 ggaatagaaggtacattgcacaggatatc 404



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>ref|NM_103058.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/
           nucleotide binding AT1G33290 transcript variant
           AT1G33290.1 mRNA, complete cds
          Length = 1270

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 440 ggaatcgaaggtacattgcataggatatc 468
           ||||| |||||||||||||| ||||||||
Sbjct: 376 ggaatagaaggtacattgcacaggatatc 404



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>ref|NM_195751.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBb0008A05.1), mRNA
          Length = 824

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 23  ccgccgctgccggcgctctcc 43
           |||||||||||||||||||||
Sbjct: 605 ccgccgctgccggcgctctcc 585



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>gb|BT014906.1| Arabidopsis thaliana At1g33290 gene, complete cds
          Length = 1147

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 440 ggaatcgaaggtacattgcataggatatc 468
           ||||| |||||||||||||| ||||||||
Sbjct: 364 ggaatagaaggtacattgcacaggatatc 392



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>gb|BT015032.1| Arabidopsis thaliana At1g33290 mRNA, complete cds
          Length = 1140

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 440 ggaatcgaaggtacattgcataggatatc 468
           ||||| |||||||||||||| ||||||||
Sbjct: 361 ggaatagaaggtacattgcacaggatatc 389



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>gb|AF452730.1| Rattus norvegicus synaptogenesis-related mRNA sequence 4
          Length = 4318

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 391  ggaggaagctcagagagctgtagga 415
            |||||||||||||||||| ||||||
Sbjct: 3172 ggaggaagctcagagagcagtagga 3196



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>gb|AC145818.1| Pan troglodytes BAC clone RP43-8O12 from 7, complete sequence
          Length = 92193

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   aggacgacctctctgagcttc 237
             |||||||||||||||||||||
Sbjct: 62102 aggacgacctctctgagcttc 62122



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>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence
          Length = 195494

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    tcatcttcatcctacccaccc 111
             |||||||||||||||||||||
Sbjct: 97557 tcatcttcatcctacccaccc 97537



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>gb|AC027820.12| Homo sapiens chromosome 17, clone RP11-198F11, complete sequence
          Length = 154353

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 91     tcatcttcatcctacccaccc 111
              |||||||||||||||||||||
Sbjct: 137147 tcatcttcatcctacccaccc 137127



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>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0008A05, complete sequence
          Length = 124366

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    ccgccgctgccggcgctctcc 43
             |||||||||||||||||||||
Sbjct: 44281 ccgccgctgccggcgctctcc 44261



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>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete
             sequence
          Length = 150465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 23    ccgccgctgccggcgctctcc 43
             |||||||||||||||||||||
Sbjct: 94746 ccgccgctgccggcgctctcc 94726



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>gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, complete sequence
          Length = 179154

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 377    tcacagctagagctggaggaa 397
              |||||||||||||||||||||
Sbjct: 159296 tcacagctagagctggaggaa 159316



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 23      ccgccgctgccggcgctctcc 43
               |||||||||||||||||||||
Sbjct: 8839674 ccgccgctgccggcgctctcc 8839654



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>emb|BX816642.1|CNS0ABLB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH5ZG08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1223

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 440 ggaatcgaaggtacattgcataggatatc 468
           ||||| |||||||||||||| ||||||||
Sbjct: 364 ggaatagaaggtacattgcacaggatatc 392



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>gb|AC147282.3| Pan troglodytes BAC clone RP43-86L11 from chromosome 7, complete sequence
          Length = 223086

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    aggacgacctctctgagcttc 237
              |||||||||||||||||||||
Sbjct: 215278 aggacgacctctctgagcttc 215258



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>gb|AC145873.3| Pan troglodytes BAC clone RP43-20K16 from chromosome 7, complete
             sequence
          Length = 149916

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   aggacgacctctctgagcttc 237
             |||||||||||||||||||||
Sbjct: 21449 aggacgacctctctgagcttc 21469



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>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete
             sequence
          Length = 81609

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 440   ggaatcgaaggtacattgcataggatatc 468
             ||||| |||||||||||||| ||||||||
Sbjct: 51275 ggaatagaaggtacattgcacaggatatc 51303



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>dbj|AK104034.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-G07, full
           insert sequence
          Length = 751

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 23  ccgccgctgccggcgctctcc 43
           |||||||||||||||||||||
Sbjct: 534 ccgccgctgccggcgctctcc 514



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>dbj|AK071458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092O07, full
           insert sequence
          Length = 750

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 23  ccgccgctgccggcgctctcc 43
           |||||||||||||||||||||
Sbjct: 533 ccgccgctgccggcgctctcc 513



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>dbj|AK070152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043A18, full
           insert sequence
          Length = 750

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 23  ccgccgctgccggcgctctcc 43
           |||||||||||||||||||||
Sbjct: 533 ccgccgctgccggcgctctcc 513



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 23      ccgccgctgccggcgctctcc 43
               |||||||||||||||||||||
Sbjct: 8844813 ccgccgctgccggcgctctcc 8844793



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>gb|AC111024.13| Mus musculus chromosome 17, clone RP23-103P1, complete sequence
          Length = 219128

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 570    aagagagcattctgtttttg 589
              ||||||||||||||||||||
Sbjct: 112937 aagagagcattctgtttttg 112918



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>gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, complete sequence
          Length = 168136

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     tcctcatcttcatcctaccc 107
              ||||||||||||||||||||
Sbjct: 151549 tcctcatcttcatcctaccc 151568



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>gb|AC091477.6| Mus musculus chromosome 1, clone RP23-309P1, complete sequence
          Length = 218109

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 452    acattgcataggatatctgccata 475
              |||||||||| |||||||||||||
Sbjct: 156355 acattgcatatgatatctgccata 156332



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 19      gtcaccgccgctgccggcgc 38
               ||||||||||||||||||||
Sbjct: 1218148 gtcaccgccgctgccggcgc 1218129



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>gb|AC166969.4| Mus musculus chromosome 1, clone RP23-226P1, complete sequence
          Length = 160078

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 452  acattgcataggatatctgccata 475
            |||||||||| |||||||||||||
Sbjct: 9724 acattgcatatgatatctgccata 9701



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>ref|XM_807353.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053506063.59) partial mRNA
          Length = 10383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 23   ccgccgctgccggcgctctc 42
            ||||||||||||||||||||
Sbjct: 9227 ccgccgctgccggcgctctc 9246



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>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence
          Length = 194636

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gcaccttcctcgccttagtc 21
             ||||||||||||||||||||
Sbjct: 32034 gcaccttcctcgccttagtc 32015



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>ref|XM_786067.1| PREDICTED: Strongylocentrotus purpuratus similar to nucleoporin 107
            (LOC586279), mRNA
          Length = 3009

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  agctggaggaagctcagaga 406
            ||||||||||||||||||||
Sbjct: 1298 agctggaggaagctcagaga 1317



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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gtcaccgccgctgccggcgc 38
              ||||||||||||||||||||
Sbjct: 184814 gtcaccgccgctgccggcgc 184795



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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gtcaccgccgctgccggcgc 38
              ||||||||||||||||||||
Sbjct: 232973 gtcaccgccgctgccggcgc 232954



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>gb|AC108081.2| Homo sapiens chromosome 16 clone CTC-661I16, complete sequence
          Length = 100808

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   gctcagagcctgggcaggca 165
             ||||||||||||||||||||
Sbjct: 58959 gctcagagcctgggcaggca 58978



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>emb|CT010580.7| Mouse DNA sequence from clone RP23-233G23 on chromosome 17, complete
              sequence
          Length = 220567

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 570    aagagagcattctgtttttg 589
              ||||||||||||||||||||
Sbjct: 151706 aagagagcattctgtttttg 151687



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>emb|CR854964.10| Zebrafish DNA sequence from clone DKEY-58J19 in linkage group 1,
             complete sequence
          Length = 180969

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 403   gagagctgtaggagaatttg 422
             ||||||||||||||||||||
Sbjct: 75755 gagagctgtaggagaatttg 75736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,663,418
Number of Sequences: 3902068
Number of extensions: 4663418
Number of successful extensions: 92898
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92655
Number of HSP's gapped (non-prelim): 243
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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