ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U37703.1|HVU37703 Hordeum vulgare ORF 62 mRNA, chloroplast gene, encoding chloroplast protein, complete cds Length = 697 Score = 950 bits (479), Expect = 0.0 Identities = 493/500 (98%) Strand = Plus / Plus Query: 1 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 138 Query: 61 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 198 Query: 121 gttaagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gttaagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcct 258 Query: 181 acttcttgtannnnnnnacaattttggttaagtgagggatcaaatatgtagtcaacttta 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 acttcttgtatttttttacaattttggttaagtgagggatcaaatatgtagtcaacttta 318 Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 378 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 438 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 498 Query: 421 ctttctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ctttctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttagt 558 Query: 481 aaccccataaaaaagaaata 500 |||||||||||||||||||| Sbjct: 559 aaccccataaaaaagaaata 578
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 880 bits (444), Expect = 0.0 Identities = 486/501 (97%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 1 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 454 Query: 61 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 120 |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 455 ccgcttgtgaaataaagagtaaataatctcttctcacccccatatccaaataaaaaagcg 514 Query: 121 gtt-aagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcc 179 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 gtttaagtaataaatttgaattaaagagaagaatcaatggattcatgattaaacccctcc 574 Query: 180 tacttcttgtannnnnnnacaattttggttaagtgagggatcaaatatgtagtcaacttt 239 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 tacttcttgtatttttttacaattttggttaagtgagggatcaaatatgtagtcaacttt 634 Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 694 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 754 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 755 atggttggtcaaataataaaaatgttgtattttctggtacatcattatggattggactag 814 Query: 420 tctttctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttag 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tctttctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttat 874 Query: 480 taaccccataaaaaagaaata 500 ||||||||||||||||||||| Sbjct: 875 taaccccataaaaaagaaata 895
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 880 bits (444), Expect = 0.0 Identities = 486/501 (97%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 1 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11749 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 11808 Query: 61 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 120 |||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 11809 ccgcttgtgaaataaagagtaaataatctcttctcacccccatatccaaataaaaaagcg 11868 Query: 121 gtt-aagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcc 179 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11869 gtttaagtaataaatttgaattaaagagaagaatcaatggattcatgattaaacccctcc 11928 Query: 180 tacttcttgtannnnnnnacaattttggttaagtgagggatcaaatatgtagtcaacttt 239 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11929 tacttcttgtatttttttacaattttggttaagtgagggatcaaatatgtagtcaacttt 11988 Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11989 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 12048 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12049 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 12108 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12109 atggttggtcaaataataaaaatgttgtattttctggtacatcattatggattggactag 12168 Query: 420 tctttctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttag 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12169 tctttctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttat 12228 Query: 480 taaccccataaaaaagaaata 500 ||||||||||||||||||||| Sbjct: 12229 taaccccataaaaaagaaata 12249
>emb|X02560.1|CHTATRN1 Wheat chloroplast genes for tRNA-Gly (GCC), tRNA-Met (CAU) and tRNA-Gly (UCC) Length = 2358 Score = 771 bits (389), Expect = 0.0 Identities = 437/454 (96%), Gaps = 1/454 (0%) Strand = Plus / Plus Query: 48 ggatccgctatacccgcttgtgaaataaagactaaataacctcctctcacccccatatcc 107 |||||| |||||||| ||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct: 1 ggatcccctatacccccttgtgaaataaagagtaaataatctcttctcacccccatatcc 60 Query: 108 aaataaaaaagaggtt-aagtaataaattttaattaaagagaagaatcaatggattcatg 166 ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 61 aaataaaaaagcggtttaagtaataaatttgaattaaagagaagaatcaatggattcatg 120 Query: 167 attaaacccctcctacttcttgtannnnnnnacaattttggttaagtgagggatcaaata 226 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 121 attaaacccctcctacttcttgtatttttttacaattttggttaagtgagggatcaaata 180 Query: 227 tgtagtcaactttatttgatggtagcttggaggattagaaatatgactattgctttccaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgtagtcaactttatttgatggtagcttggaggattagaaatatgactattgctttccaa 240 Query: 287 ttagctgtttttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgta 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttagctgtttttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgta 300 Query: 347 tttgcttctcctgatggttggtcaaataataaaaatgttgtattttccggtacatcatta 406 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 301 tttgcttctcctgatggttggtcaaataataaaaatgttgtattttctggtacatcatta 360 Query: 407 tggattggactagtctttctcgtagctattctgaattctctcatttcttaaattaaattt 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tggattggactagtctttctcgtagctattctgaattctctcatttcttaaattaaattt 420 Query: 467 ggttaatatttagtaaccccataaaaaagaaata 500 |||||||||||| ||||||||||||||||||||| Sbjct: 421 ggttaatatttattaaccccataaaaaagaaata 454
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 559 bits (282), Expect = e-156 Identities = 412/456 (90%), Gaps = 10/456 (2%) Strand = Plus / Plus Query: 11 tttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttgtga 70 |||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 73808 tttcaatatatctctgtatactgtatacacggatacagaatccgctatatccgtttgtga 73867 Query: 71 aataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagtaat 130 ||||||| |||||| ||||| |||| | ||||||||||||||||| | |||| || Sbjct: 73868 aataaaggctaaatcccctcccctcaactccatatccaaataaaaacgg---taaggaaa 73924 Query: 131 aaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttcttgta 190 || ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 73925 aagttttaataaaa-agaagaatcaacggattcatgattaaacccctcctacttcttgta 73983 Query: 191 nnnnnnnacaattttggttaagtgagggatcaaata------tgtagtcaactttatttg 244 ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 73984 ttttcgtacaattttgattaagtgagggatcaaatagaaatatgtagtcaactttatttg 74043 Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 74044 aaggtagtttggaggattataaatatgactattgctttccaattagctgtttttgcatta 74103 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 74104 attgcgacttcctcagttttagtaattagtgtaccccttgtatttgcttctcctgatggt 74163 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 74164 tggtcaaataataaaaacgttgtattttccggtacatcattatggattggattagtcttt 74223 Query: 425 ctcgtagctattctgaattctctcatttcttaaatt 460 || |||||||||||||||||||| ||||||| |||| Sbjct: 74224 ctggtagctattctgaattctcttatttcttgaatt 74259
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 559 bits (282), Expect = e-156 Identities = 412/456 (90%), Gaps = 10/456 (2%) Strand = Plus / Plus Query: 11 tttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttgtga 70 |||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 12181 tttcaatatatctctgtatactgtatacacggatacagaatccgctatatccgtttgtga 12240 Query: 71 aataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagtaat 130 ||||||| |||||| ||||| |||| | ||||||||||||||||| | |||| || Sbjct: 12241 aataaaggctaaatcccctcccctcaactccatatccaaataaaaacgg---taaggaaa 12297 Query: 131 aaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttcttgta 190 || ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12298 aagttttaataaaa-agaagaatcaacggattcatgattaaacccctcctacttcttgta 12356 Query: 191 nnnnnnnacaattttggttaagtgagggatcaaata------tgtagtcaactttatttg 244 ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 12357 ttttcgtacaattttgattaagtgagggatcaaatagaaatatgtagtcaactttatttg 12416 Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12417 aaggtagtttggaggattataaatatgactattgctttccaattagctgtttttgcatta 12476 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12477 attgcgacttcctcagttttagtaattagtgtaccccttgtatttgcttctcctgatggt 12536 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12537 tggtcaaataataaaaacgttgtattttccggtacatcattatggattggattagtcttt 12596 Query: 425 ctcgtagctattctgaattctctcatttcttaaatt 460 || |||||||||||||||||||| ||||||| |||| Sbjct: 12597 ctggtagctattctgaattctcttatttcttgaatt 12632
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 11681 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 11740 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 11741 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 11796 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11797 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 11852 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 11853 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 11912 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11913 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 11972 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11973 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 12032 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 12033 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 12092 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 12093 ttctggtagctattctaaattctctcatttcttaaat 12129
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 11681 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 11740 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 11741 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 11796 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11797 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 11852 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 11853 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 11912 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11913 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 11972 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11973 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 12032 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 12033 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 12092 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 12093 ttctggtagctattctaaattctctcatttcttaaat 12129
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 11618 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 11677 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 11678 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 11733 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11734 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 11789 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 11790 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 11849 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11850 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 11909 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11910 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 11969 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 11970 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 12029 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 12030 ttctggtagctattctaaattctctcatttcttaaat 12066
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 11679 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 11738 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 11739 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 11794 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11795 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 11850 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 11851 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 11910 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11911 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 11970 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11971 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 12030 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 12031 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 12090 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 12091 ttctggtagctattctaaattctctcatttcttaaat 12127
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Minus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 14384638 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 14384579 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 14384578 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 14384523 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14384522 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 14384467 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 14384466 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 14384407 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14384406 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 14384347 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 14384346 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 14384287 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 14384286 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 14384227 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 14384226 ttctggtagctattctaaattctctcatttcttaaat 14384190
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 33563696 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 33563755 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 33563756 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 33563811 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33563812 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 33563867 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 33563868 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 33563927 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33563928 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 33563987 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 33563988 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 33564047 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 33564048 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 33564107 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 33564108 ttctggtagctattctaaattctctcatttcttaaat 33564144 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 154 caatggattcatgattaaacccctcctacttcttgta 190 ||||||||||||||||||||||||||||||||||||| Sbjct: 12843022 caatggattcatgattaaacccctcctacttcttgta 12843058
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 108893 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 108952 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 108953 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 109008 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109009 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 109064 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 109065 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 109124 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109125 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 109184 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 109185 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 109244 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 109245 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 109304 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 109305 ttctggtagctattctaaattctctcatttcttaaat 109341
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Minus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 106560 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 106501 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 106500 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 106445 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106444 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 106389 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 106388 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 106329 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106328 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 106269 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106268 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 106209 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 106208 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 106149 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 106148 ttctggtagctattctaaattctctcatttcttaaat 106112
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 11616 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 11675 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 11676 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 11731 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11732 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 11787 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 11788 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 11847 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11848 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 11907 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 11908 taattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcctgatg 11967 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 11968 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 12027 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 12028 ttctggtagctattctaaattctctcatttcttaaat 12064
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 555 bits (280), Expect = e-155 Identities = 418/464 (90%), Gaps = 13/464 (2%) Strand = Plus / Plus Query: 1 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 60 |||||| |||||||||||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 34185450 acaagtcccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatat 34185509 Query: 61 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 120 ||||||||||||||||| |||| ||| |||| | |||||||||||||||||||| Sbjct: 34185510 ccgcttgtgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagt 34185565 Query: 121 gttaagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcct 180 | | |||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 34185566 ggtgagtaataagtt----ttaaagagaagaatcaatggattcatgattaaacccctctt 34185621 Query: 181 acttcttgtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaa 235 |||||||||| ||||||||| ||||||||||||||| ||||||||||||| Sbjct: 34185622 acttcttgtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaa 34185681 Query: 236 ctttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtt 295 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34185682 ctttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtt 34185741 Query: 296 tttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttct 355 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 34185742 tttgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttct 34185801 Query: 356 cctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattgga 415 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34185802 cctgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattgga 34185861 Query: 416 ctagtctttctcgtagctattctgaattctctcatttcttaaat 459 || |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 34185862 ctggtctttctggtagctattctaaattctctcatttcttaaat 34185905 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctata 59 |||||||||||||| ||| |||||||||| || | ||||||||||||||||| Sbjct: 35299761 ccttttcgatatatttctatatactgtatccatgtatacaggatccgctata 35299812
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 555 bits (280), Expect = e-155 Identities = 418/464 (90%), Gaps = 13/464 (2%) Strand = Plus / Plus Query: 1 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 60 |||||| |||||||||||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 34275922 acaagtcccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatat 34275981 Query: 61 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 120 ||||||||||||||||| |||| ||| |||| | |||||||||||||||||||| Sbjct: 34275982 ccgcttgtgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagt 34276037 Query: 121 gttaagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcct 180 | | |||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 34276038 ggtgagtaataagtt----ttaaagagaagaatcaatggattcatgattaaacccctctt 34276093 Query: 181 acttcttgtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaa 235 |||||||||| ||||||||| ||||||||||||||| ||||||||||||| Sbjct: 34276094 acttcttgtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaa 34276153 Query: 236 ctttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtt 295 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34276154 ctttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtt 34276213 Query: 296 tttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttct 355 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 34276214 tttgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttct 34276273 Query: 356 cctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattgga 415 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34276274 cctgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattgga 34276333 Query: 416 ctagtctttctcgtagctattctgaattctctcatttcttaaat 459 || |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 34276334 ctggtctttctggtagctattctaaattctctcatttcttaaat 34276377 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctata 59 |||||||||||||| ||| |||||||||| || | ||||||||||||||||| Sbjct: 35389833 ccttttcgatatatttctatatactgtatccatgtatacaggatccgctata 35389884
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 555 bits (280), Expect = e-155 Identities = 418/464 (90%), Gaps = 13/464 (2%) Strand = Plus / Plus Query: 1 acaagttccttttcgatatatctctgtatactgtatacacggatacaggatccgctatac 60 |||||| |||||||||||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 149262 acaagtcccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatat 149321 Query: 61 ccgcttgtgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagag 120 ||||||||||||||||| |||| ||| |||| | |||||||||||||||||||| Sbjct: 149322 ccgcttgtgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagt 149377 Query: 121 gttaagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcct 180 | | |||||||| || ||||||||||||||||||||||||||||||||||||||| | Sbjct: 149378 ggtgagtaataagtt----ttaaagagaagaatcaatggattcatgattaaacccctctt 149433 Query: 181 acttcttgtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaa 235 |||||||||| ||||||||| ||||||||||||||| ||||||||||||| Sbjct: 149434 acttcttgtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaa 149493 Query: 236 ctttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtt 295 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149494 ctttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtt 149553 Query: 296 tttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttct 355 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149554 tttgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttct 149613 Query: 356 cctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattgga 415 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 149614 cctgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattgga 149673 Query: 416 ctagtctttctcgtagctattctgaattctctcatttcttaaat 459 || |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 149674 ctggtctttctggtagctattctaaattctctcatttcttaaat 149717
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 549 bits (277), Expect = e-153 Identities = 412/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 9903 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 9962 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 9963 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 10018 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10019 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 10074 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 10075 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 10134 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10135 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 10194 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 10195 taattgtgacttcctcagtcttagtcattagtgtaccctttgtatttgcttctcctgatg 10254 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 10255 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 10314 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 10315 ttctggtagctattctaaattctctcatttcttaaat 10351
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 549 bits (277), Expect = e-153 Identities = 412/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 84836 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 84895 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 84896 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 84951 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84952 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 85007 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 85008 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 85067 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85068 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 85127 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 85128 taattgtgacttcctcagtcttagtcattagtgtaccctttgtatttgcttctcctgatg 85187 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 85188 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 85247 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 85248 ttctggtagctattctaaattctctcatttcttaaat 85284
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 549 bits (277), Expect = e-153 Identities = 412/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 10303511 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 10303570 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 10303571 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 10303626 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10303627 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 10303682 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 10303683 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 10303742 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10303743 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 10303802 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 10303803 taattgtgacttcctcagtcttagtcattagtgtaccctttgtatttgcttctcctgatg 10303862 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 10303863 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 10303922 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 10303923 ttctggtagctattctaaattctctcatttcttaaat 10303959
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 549 bits (277), Expect = e-153 Identities = 412/457 (90%), Gaps = 13/457 (2%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 10309550 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 10309609 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 10309610 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 10309665 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10309666 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 10309721 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 10309722 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 10309781 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10309782 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 10309841 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 10309842 taattgtgacttcctcagtcttagtcattagtgtaccctttgtatttgcttctcctgatg 10309901 Query: 363 gttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtct 422 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 10309902 gttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggactggtct 10309961 Query: 423 ttctcgtagctattctgaattctctcatttcttaaat 459 |||| ||||||||||| |||||||||||||||||||| Sbjct: 10309962 ttctggtagctattctaaattctctcatttcttaaat 10309998
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 541 bits (273), Expect = e-151 Identities = 416/462 (90%), Gaps = 18/462 (3%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 95028 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 95087 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaa-aagaggt---- 122 |||||||||| |||| ||| |||| | |||||||||||||||||| ||| ||| Sbjct: 95088 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgtgg 95143 Query: 123 taagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctac 182 | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95144 tgagtaataagttttaa----agagaagaatcaatggattcatgattaaacccctcctac 95199 Query: 183 ttcttgtannnnnnnacaattttggttaagtgagggatcaaatat-----gtagtcaact 237 |||||||| ||||||||| |||||||||||||||||||| |||||||||| Sbjct: 95200 ttcttgtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaact 95259 Query: 238 ttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttt 297 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95260 ttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttt 95319 Query: 298 tgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcc 357 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95320 tgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcc 95379 Query: 358 tgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggact 417 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95380 tgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggact 95439 Query: 418 agtctttctcgtagctattctgaattctctcatttcttaaat 459 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 95440 ggtctttctggtagctattctaaattctctcatttcttaaat 95481
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 541 bits (273), Expect = e-151 Identities = 416/462 (90%), Gaps = 18/462 (3%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 9240907 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 9240966 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaa-aagaggt---- 122 |||||||||| |||| ||| |||| | |||||||||||||||||| ||| ||| Sbjct: 9240967 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgtgg 9241022 Query: 123 taagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctac 182 | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9241023 tgagtaataagttttaa----agagaagaatcaatggattcatgattaaacccctcctac 9241078 Query: 183 ttcttgtannnnnnnacaattttggttaagtgagggatcaaatat-----gtagtcaact 237 |||||||| ||||||||| |||||||||||||||||||| |||||||||| Sbjct: 9241079 ttcttgtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaact 9241138 Query: 238 ttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttt 297 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241139 ttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttt 9241198 Query: 298 tgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcc 357 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241199 tgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcc 9241258 Query: 358 tgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggact 417 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9241259 tgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggact 9241318 Query: 418 agtctttctcgtagctattctgaattctctcatttcttaaat 459 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 9241319 ggtctttctggtagctattctaaattctctcatttcttaaat 9241360 Score = 541 bits (273), Expect = e-151 Identities = 416/462 (90%), Gaps = 18/462 (3%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 9137002 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 9137061 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaa-aagaggt---- 122 |||||||||| |||| ||| |||| | |||||||||||||||||| ||| ||| Sbjct: 9137062 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgtgg 9137117 Query: 123 taagtaataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctac 182 | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9137118 tgagtaataagttttaa----agagaagaatcaatggattcatgattaaacccctcctac 9137173 Query: 183 ttcttgtannnnnnnacaattttggttaagtgagggatcaaatat-----gtagtcaact 237 |||||||| ||||||||| |||||||||||||||||||| |||||||||| Sbjct: 9137174 ttcttgtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaact 9137233 Query: 238 ttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttt 297 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9137234 ttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttt 9137293 Query: 298 tgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcc 357 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9137294 tgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcc 9137353 Query: 358 tgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggact 417 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9137354 tgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggact 9137413 Query: 418 agtctttctcgtagctattctgaattctctcatttcttaaat 459 |||||||| ||||||||||| |||||||||||||||||||| Sbjct: 9137414 ggtctttctggtagctattctaaattctctcatttcttaaat 9137455 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 aatttggttaatatttagtaa 482 ||||||||||||||||||||| Sbjct: 23914876 aatttggttaatatttagtaa 23914856 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tctctgtatactgtatacac 40 |||||||||||||||||||| Sbjct: 2510755 tctctgtatactgtatacac 2510736
>emb|X05295.1|CHZPTRNS Zea perennis cpDNA EcoRI-PstI fragment containing length mutation LM-3 from large unique sequence region Length = 831 Score = 504 bits (254), Expect = e-139 Identities = 398/441 (90%), Gaps = 13/441 (2%) Strand = Plus / Plus Query: 11 tttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttgtga 70 |||| ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 397 tttcaatatatctctgtatactgtatacacggatacagaatccgctatatccg-ttgtga 455 Query: 71 aataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagtaat 130 ||||||| |||||| ||||| |||| | ||||||| |||||||| | ||| ||| || Sbjct: 456 aataaag-ctaaatcccctcccctcaactccatatctaaataaaa--gcggt-aaggaaa 511 Query: 131 aaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttcttgta 190 || ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 aagttttaataaaa-agaagaatcaatggattcatgattaaacccctcctacttcttgta 570 Query: 191 nnnnnnnacaattttggttaagtgagggatcaaata------tgtagtcaactttatttg 244 ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 571 ttttcatacaattttgattaagtgagggatcaaatagaaatatgtagtcaactttatttg 630 Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 | ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 631 aaggtagtttggaggattataaatatgaatattgctttccaattagctgtttttgcatta 690 Query: 305 attgcga-cttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatgg 363 ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 attgcgaacttcctcagttttagtaattagtgtaccccttgtatttgcttctcctgatgg 750 Query: 364 ttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctt 423 |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 751 ttggtcaaataataaaaacgttgtattttccggtacatcattatggattggattagtctt 810 Query: 424 tctcgtagctattctgaattc 444 ||| ||||||||||||||||| Sbjct: 811 tctggtagctattctgaattc 831
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 464 bits (234), Expect = e-127 Identities = 301/326 (92%), Gaps = 6/326 (1%) Strand = Plus / Plus Query: 141 taaagagaagaatcaatggattcatgattaaacccctcctacttcttgtannnnnnnaca 200 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11877 taaaaagaagaatcaatggattcatgattaaacccctcctacttcttgtattttcataca 11936 Query: 201 attttggttaagtgagggatcaaata------tgtagtcaactttatttgatggtagctt 254 |||||| ||||||||||||||||||| ||||||||||||||||||| ||||| || Sbjct: 11937 attttgattaagtgagggatcaaatagaaatatgtagtcaactttatttgaaggtagttt 11996 Query: 255 ggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgactt 314 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11997 ggaggattataaatatgaatattgctttccaattagctgtttttgcattaattgcgactt 12056 Query: 315 cctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaata 374 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12057 cctcagttttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaata 12116 Query: 375 ataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagcta 434 ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 12117 ataaaaacgttgtattttccggtacatcattatggattggattagtctttctggtagcta 12176 Query: 435 ttctgaattctctcatttcttaaatt 460 ||||||||||||| ||||||| |||| Sbjct: 12177 ttctgaattctcttatttcttgaatt 12202
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 452 bits (228), Expect = e-124 Identities = 354/396 (89%), Gaps = 13/396 (3%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 142710 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 142769 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 142770 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 142825 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142826 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 142881 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 142882 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 142941 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142942 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 143001 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 143002 taattgtgacttcctcagtctaagtcattagtgtaccccttgtatttgcttctcctgatg 143061 Query: 363 gttggtcaaataataaaaatgttgtattttccggta 398 |||||||||| |||||||| |||||||||||||||| Sbjct: 143062 gttggtcaaacaataaaaacgttgtattttccggta 143097
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 452 bits (228), Expect = e-124 Identities = 354/396 (89%), Gaps = 13/396 (3%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 5797 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 5856 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 5857 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 5912 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5913 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 5968 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 5969 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 6028 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6029 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 6088 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 6089 taattgtgacttcctcagtctaagtcattagtgtaccccttgtatttgcttctcctgatg 6148 Query: 363 gttggtcaaataataaaaatgttgtattttccggta 398 |||||||||| |||||||| |||||||||||||||| Sbjct: 6149 gttggtcaaacaataaaaacgttgtattttccggta 6184
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 452 bits (228), Expect = e-124 Identities = 354/396 (89%), Gaps = 13/396 (3%) Strand = Plus / Plus Query: 8 ccttttcgatatatctctgtatactgtatacacggatacaggatccgctatacccgcttg 67 |||||||||||||| |||||||||||||| || | ||||||||||||||||| ||||||| Sbjct: 12845251 ccttttcgatatatttctgtatactgtatccatgtatacaggatccgctatatccgcttg 12845310 Query: 68 tgaaataaagactaaataacctcctctcacccccatatccaaataaaaaagaggttaagt 127 |||||||||| |||| ||| |||| | |||||||||||||||||||| | | ||| Sbjct: 12845311 tgaaataaagcataaa--accccctc--aaccccatatccaaataaaaaaagtggtgagt 12845366 Query: 128 aataaattttaattaaagagaagaatcaatggattcatgattaaacccctcctacttctt 187 ||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12845367 aataagtt----ttaaagagaagaatcaatggattcatgattaaacccctcctacttctt 12845422 Query: 188 gtannnnnnnacaattttggttaagtgagggatca-----aatatgtagtcaactttatt 242 ||| ||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 12845423 gtattttattacaattttgattaagtgagggatcaaatataatatgtagtcaactttatt 12845482 Query: 243 tgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcat 302 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12845483 tgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttttgcat 12845542 Query: 303 taattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatg 362 |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 12845543 taattgtgacttcctcagtctaagtcattagtgtaccccttgtatttgcttctcctgatg 12845602 Query: 363 gttggtcaaataataaaaatgttgtattttccggta 398 |||||||||| |||||||| |||||||||||||||| Sbjct: 12845603 gttggtcaaacaataaaaacgttgtattttccggta 12845638
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 440 bits (222), Expect = e-120 Identities = 298/326 (91%), Gaps = 6/326 (1%) Strand = Plus / Plus Query: 141 taaagagaagaatcaatggattcatgattaaacccctcctacttcttgtannnnnnnaca 200 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11883 taaaaagaagaatcaatggattcatgattaaacccctcctacttcttgtattttcataca 11942 Query: 201 attttggttaagtgagggatcaaata------tgtagtcaactttatttgatggtagctt 254 |||||| ||||||||||||||||||| ||||||||||||||||||| ||||| || Sbjct: 11943 attttgattaagtgagggatcaaatagaaatatgtagtcaactttatttgaaggtagttt 12002 Query: 255 ggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgactt 314 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12003 ggaggattataaatatgaatattgctttccaattagctgtttttgcattaattgcgactt 12062 Query: 315 cctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaata 374 ||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 12063 cctcagttttagtaattagaggacaccttgtatttgcttctcctgatggttggtcaaata 12122 Query: 375 ataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagcta 434 ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 12123 ataaaaacgttgtattttccggtacatcattatggattggattagtctttctggtagcta 12182 Query: 435 ttctgaattctctcatttcttaaatt 460 ||||||||||||| ||||||| |||| Sbjct: 12183 ttctgaattctcttatttcttgaatt 12208
>ref|XM_465410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 359 bits (181), Expect = 6e-96 Identities = 205/213 (96%) Strand = Plus / Minus Query: 238 ttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttt 297 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 ttatttgatggtaacttggaggattagaaatatgactattgctttccaattagctgtttt 154 Query: 298 tgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcc 357 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 153 tgcattaattgtgacttcctcagtcttagtcattagtgtaccccttgtatttgcttctcc 94 Query: 358 tgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggact 417 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 93 tgatggttggtcaaacaataaaaacgttgtattttccggtacatcattatggattggact 34 Query: 418 agtctttctcgtagctattctgaattctctcat 450 |||||||| ||||||||||| ||||||||||| Sbjct: 33 ggtctttctggtagctattctaaattctctcat 1
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 355 bits (179), Expect = 9e-95 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Minus Query: 198 acaattttggttaagtgagggatcaaatat-----gtagtcaactttatttgatggtagc 252 ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 19333751 acaattttgattaagtgagggatcaaatataatacgtagttaactttatttgatggtaac 19333692 Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19333691 ttgaaggattagaaatatgactattgctttccaattagctgtttttgcattaattgtgac 19333632 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 19333631 ttcctcagtcttagtccttagtgtaccccttgtatttgcttctcttgatggttgttcaaa 19333572 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 |||||||| |||||||||| || ||||||||||||||| ||||| |||||||| ||||| Sbjct: 19333571 caataaaaacgttgtatttttcgatacatcattatggataggactggtctttctggtagc 19333512 Query: 433 tattctgaattctctcatttcttaaat 459 |||||| |||||||||||||||||||| Sbjct: 19333511 tattctaaattctctcatttcttaaat 19333485 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 atttggttaatatttagtaa 482 |||||||||||||||||||| Sbjct: 26570859 atttggttaatatttagtaa 26570878
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 355 bits (179), Expect = 9e-95 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Minus Query: 198 acaattttggttaagtgagggatcaaatat-----gtagtcaactttatttgatggtagc 252 ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 19259978 acaattttgattaagtgagggatcaaatataatacgtagttaactttatttgatggtaac 19259919 Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19259918 ttgaaggattagaaatatgactattgctttccaattagctgtttttgcattaattgtgac 19259859 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 19259858 ttcctcagtcttagtccttagtgtaccccttgtatttgcttctcttgatggttgttcaaa 19259799 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 |||||||| |||||||||| || ||||||||||||||| ||||| |||||||| ||||| Sbjct: 19259798 caataaaaacgttgtatttttcgatacatcattatggataggactggtctttctggtagc 19259739 Query: 433 tattctgaattctctcatttcttaaat 459 |||||| |||||||||||||||||||| Sbjct: 19259738 tattctaaattctctcatttcttaaat 19259712 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 atttggttaatatttagtaa 482 |||||||||||||||||||| Sbjct: 26499028 atttggttaatatttagtaa 26499047
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 355 bits (179), Expect = 9e-95 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Minus Query: 198 acaattttggttaagtgagggatcaaatat-----gtagtcaactttatttgatggtagc 252 ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 39362 acaattttgattaagtgagggatcaaatataatacgtagttaactttatttgatggtaac 39303 Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 39302 ttgaaggattagaaatatgactattgctttccaattagctgtttttgcattaattgtgac 39243 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 39242 ttcctcagtcttagtccttagtgtaccccttgtatttgcttctcttgatggttgttcaaa 39183 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 |||||||| |||||||||| || ||||||||||||||| ||||| |||||||| ||||| Sbjct: 39182 caataaaaacgttgtatttttcgatacatcattatggataggactggtctttctggtagc 39123 Query: 433 tattctgaattctctcatttcttaaat 459 |||||| |||||||||||||||||||| Sbjct: 39122 tattctaaattctctcatttcttaaat 39096
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 355 bits (179), Expect = 9e-95 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Minus Query: 198 acaattttggttaagtgagggatcaaatat-----gtagtcaactttatttgatggtagc 252 ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 11445 acaattttgattaagtgagggatcaaatataatacgtagttaactttatttgatggtaac 11386 Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11385 ttgaaggattagaaatatgactattgctttccaattagctgtttttgcattaattgtgac 11326 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 11325 ttcctcagtcttagtccttagtgtaccccttgtatttgcttctcttgatggttgttcaaa 11266 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 |||||||| |||||||||| || ||||||||||||||| ||||| |||||||| ||||| Sbjct: 11265 caataaaaacgttgtatttttcgatacatcattatggataggactggtctttctggtagc 11206 Query: 433 tattctgaattctctcatttcttaaat 459 |||||| |||||||||||||||||||| Sbjct: 11205 tattctaaattctctcatttcttaaat 11179
>ref|NM_195973.1| Oryza sativa (japonica cultivar-group) hypothetical protein ORF62 from chromosome 10 chloroplast insertion (OSJNBb0075K12.23), mRNA Length = 189 Score = 311 bits (157), Expect = 1e-81 Identities = 181/189 (95%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 atgactattgctttccaattagctgtttttgcattaattgtgacttcctcagtcttagtc 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 61 attagtgtaccctttgtatttgcttctcctgatggttggtcaaacaataaaaacgttgta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct: 121 ttttccggtacatcattatggattggactggtctttctggtagctattctaaattctctc 180 Query: 449 atttcttaa 457 ||||||||| Sbjct: 181 atttcttaa 189
>gb|AY727480.1| Trillium texanum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1019 Score = 291 bits (147), Expect = 1e-75 Identities = 201/219 (91%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 309 tttatttgtcggtagcttggaggattataaacatgactattgctttccaattagctgttt 368 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||||||||| ||| ||||| | ||||||||||| |||||||||||||| Sbjct: 369 ttgcattaattgcgacttcatcaatcttactgattagtgtacctgttgtatttgcttctt 428 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ctgatggttggtcaagtaacaaaaatgttgtattttccggtacatcattatggattggat 488 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 489 tagtctttctagtagctatccttaattctctcatctctt 527
>gb|AY727478.1| Pseudotrillium rivale PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 985 Score = 291 bits (147), Expect = 1e-75 Identities = 201/219 (91%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 302 tttatttgtcggtagcttggaggattataaacatgactattgctttccaattagctgttt 361 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||||||||| ||| ||||| | ||||||||||| |||||||||||||| Sbjct: 362 ttgcattaattgcgacttcatcaatcttactgattagtgtacctgttgtatttgcttctt 421 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 422 ctgatggttggtcaagtaacaaaaatgttgtattttccggtacatcattatggattggat 481 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 482 tagtctttctagtagctatccttaattctctcatctctt 520
>gb|AY727479.1| Trillium ovatum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1013 Score = 283 bits (143), Expect = 3e-73 Identities = 200/219 (91%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 289 tttatttgtcggtagcttggaggattataaacatgactattgctttccaattagctgttt 348 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||||||||| ||| ||||| | ||||||||||| |||||||||||||| Sbjct: 349 ttgcattaattgcgacttcatcaatcttactgattagtgtacctgttgtatttgcttctt 408 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 409 ctgatggttggtcaagtaacaaaaatgttgtattttccggtacatcattatggattggat 468 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 | |||||||| |||||||| || ||||||||||| |||| Sbjct: 469 tggtctttctagtagctatccttaattctctcatctctt 507
>gb|AY642469.1| Phragmipedium lindenii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 7e-71 Identities = 193/211 (91%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 285 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 344 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 345 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 404 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 405 atggttggtcaagtaaaaaaaatgttgtattttctggtacatcattatggattggattag 464 Query: 420 tctttctcgtagctattctgaattctctcat 450 ||||||| |||||||| |||||||||||||| Sbjct: 465 tctttctggtagctatcctgaattctctcat 495
>gb|AY642468.1| Phragmipedium sargentianum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1009 Score = 276 bits (139), Expect = 7e-71 Identities = 193/211 (91%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 285 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 344 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 345 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 404 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 405 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 464 Query: 420 tctttctcgtagctattctgaattctctcat 450 ||||||| |||||||| |||||||||||||| Sbjct: 465 tctttctggtagctatcctgaattctctcat 495
>gb|AY642467.1| Phragmipedium boissierianum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 7e-71 Identities = 193/211 (91%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 285 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 344 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 345 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 404 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 405 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 464 Query: 420 tctttctcgtagctattctgaattctctcat 450 ||||||| |||||||| |||||||||||||| Sbjct: 465 tctttctggtagctatcctgaattctctcat 495
>gb|AY642466.1| Phragmipedium longifolium tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 7e-71 Identities = 193/211 (91%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 285 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 344 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 345 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 404 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 405 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 464 Query: 420 tctttctcgtagctattctgaattctctcat 450 ||||||| |||||||| |||||||||||||| Sbjct: 465 tctttctggtagctatcctgaattctctcat 495
>gb|AY642465.1| Phragmipedium caudatum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 7e-71 Identities = 193/211 (91%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 285 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 344 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 345 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 404 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 405 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 464 Query: 420 tctttctcgtagctattctgaattctctcat 450 ||||||| |||||||| |||||||||||||| Sbjct: 465 tctttctggtagctatcctgaattctctcat 495
>emb|AM085641.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP30 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085640.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP28 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085639.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP27 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085638.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP26 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085637.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP25 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085636.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP24 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085635.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP19 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085634.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP14 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085633.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP11 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085632.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP10 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085631.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP7 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>emb|AM085630.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP3 Length = 1153 Score = 276 bits (139), Expect = 7e-71 Identities = 199/219 (90%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 336 tttatttgttggtagcttggaggattagaagcatgactattgctttccaattggctgttt 395 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| Sbjct: 396 ttgcattaattgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctt 455 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 |||| |||||||||| ||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 456 ctgacggttggtcaagtaacaaaaattttgtattttccggtacatcattatggattggat 515 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||||||| || ||||||||||| |||| Sbjct: 516 tagtctttctagtagctatccttaattctctcatctctt 554
>gb|AY642483.1| Cypripedium acaule tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 930 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 284 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 343 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 344 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 403 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 404 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 463 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| || ||||||||||| |||| Sbjct: 464 tctttctggtagctatccttaattctctcatctctt 499
>gb|AY642482.1| Paphiopedilum niveum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 958 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642481.1| Paphiopedilum micranthum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1008 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 294 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 353 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 354 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 413 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 ||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 414 atggtgggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 473 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 474 tctttctggtagctatcctgaattctctcatctctt 509
>gb|AY642479.1| Paphiopedilum supardii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 986 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 295 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 354 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 355 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 414 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 415 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 474 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 475 tctttctggtagctatcctgaattctctcatctctt 510
>gb|AY642478.1| Paphiopedilum concolor tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 870 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 203 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 262 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 263 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 322 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 323 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 382 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 383 tctttctggtagctatcctgaattctctcatctctt 418
>gb|AY642477.1| Paphiopedilum hybrid cultivar tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 980 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642476.1| Paphiopedilum philippinense tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 980 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642475.1| Paphiopedilum lowii var. richardianum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 978 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642474.1| Paphiopedilum tonsum var. braemii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642473.1| Paphiopedilum insigne var. sanderae tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642472.1| Paphiopedilum adductum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 984 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642471.1| Paphiopedilum insigne tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY642470.1| Paphiopedilum glaucophyllum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 4e-69 Identities = 196/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|DQ069353.1| Typha latifolia photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 270 bits (136), Expect = 4e-69 Identities = 166/176 (94%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1 atgactattgctttccaattagctgtttttgcattaattgcgacttcatcagtcttactg 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 61 attagtgtacccgttgtatttgcttctcctgatggttggtcaagtaacaaaaatgttgta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattc 444 |||||||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 121 ttttccggtacatctttatggattggattagtctttctggtagctattcttaattc 176
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 268 bits (135), Expect = 2e-68 Identities = 195/215 (90%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 39210 tttgttggtagcttggaggattagaagcatgactattgctttccaattggctgtttttgc 39269 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||||| Sbjct: 39270 attaattgctacttcatcaatcttactgattagtgtacccgttgtatttgcttctcctga 39329 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| |||| ||||||||||||||||||||||||||| |||| Sbjct: 39330 tggttggtcaagtaacaaaaatattgttttttccggtacatcattatggattggattagt 39389 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 |||||| |||| ||| || ||||||||||| |||| Sbjct: 39390 ctttctggtaggtatacttaattctctcatctctt 39424
>gb|DQ069354.1| Yucca schidigera photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 266 bits (134), Expect = 6e-68 Identities = 170/182 (93%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | Sbjct: 1 atgactattgctttccaattagctgtttttgcattaattgcgacttcatcaatcttactg 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||| Sbjct: 61 attagtgtacccgttgtatttgcttcttctgatggttggtcaagtaacaaaaatgttgta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||||| |||||||| || ||||||||| Sbjct: 121 ttttccggtacatcattatggattggattagtctttctggtagctatccttaattctctc 180 Query: 449 at 450 || Sbjct: 181 at 182
>emb|AJ011807.1|HVU011807 Hordeum vulgare chloroplast tRNA-fMet and tRNA-Gly (UCC and GCC) genes Length = 2975 Score = 264 bits (133), Expect = 2e-67 Identities = 136/137 (99%) Strand = Plus / Minus Query: 364 ttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctt 423 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2975 ttggtcaaataataaaaatgttgcattttccggtacatcattatggattggactagtctt 2916 Query: 424 tctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttagtaac 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2915 tctcgtagctattctgaattctctcatttcttaaattaaatttggttaatatttagtaac 2856 Query: 484 cccataaaaaagaaata 500 ||||||||||||||||| Sbjct: 2855 cccataaaaaagaaata 2839
>gb|AY642480.1| Paphiopedilum lowii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 974 Score = 262 bits (132), Expect = 1e-66 Identities = 195/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttgatagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 349 cattaattgcaacttcactaatcttactgattagtgtacccgttgtatttgcttcttctg 408 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 409 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 468 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| |||||||||||||| |||| Sbjct: 469 tctttctggtagctatcctgaattctctcatctctt 504
>gb|AY727485.1| Liriodendron tulipifera PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1044 Score = 262 bits (132), Expect = 1e-66 Identities = 195/216 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 295 atttgttggtagtttggaggattacaagcatgactattgctttccaattggctgtttttg 354 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 355 cattaattgctacttcatcaatcttactgattagtgtacccgttgtatttgcttcttctg 414 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 415 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 474 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| || ||||||||||| |||| Sbjct: 475 tctttctggtagctatccttaattctctcatctctt 510 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaacccctcc 179 ||||||||||||||||||| | ||| |||||| Sbjct: 203 aagaatcaatggattcatggtcaaatccctcc 234
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 254 bits (128), Expect = 2e-64 Identities = 188/208 (90%) Strand = Plus / Plus Query: 248 gtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaatt 307 |||||||||||||||| || |||| ||||||||||||||| |||||||||||||||||| Sbjct: 36954 gtagcttggaggattacaagcatgattattgctttccaattggctgtttttgcattaatt 37013 Query: 308 gcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttgg 367 || ||||| ||| ||||| | ||||||||||| |||||||||||||||| ||||||||| Sbjct: 37014 gctacttcatcaatcttattgattagtgtacctgttgtatttgcttctcccgatggttgg 37073 Query: 368 tcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttctc 427 |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| Sbjct: 37074 tcaaataataaaaatgttgtattttctggtacatcattatggattggattagtatttctg 37133 Query: 428 gtagctattctgaattctctcatttctt 455 |||||||| || ||||||||||| |||| Sbjct: 37134 gtagctatccttaattctctcatctctt 37161
>gb|AY727486.1| Magnolia tripetala PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1055 Score = 254 bits (128), Expect = 2e-64 Identities = 194/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 310 atttgttggtagtttggaggattacaagcatgactattgctttccaattggctgtttttg 369 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| | | Sbjct: 370 cattaattgctacttcatcaatcttactgattagtgtacccgttgtatttgcttcttcgg 429 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 430 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 489 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| |||||||| || ||||||||||| |||| Sbjct: 490 tctttctggtagctatccttaattctctcatctctt 525 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaacccctcc 179 ||||||||||||||||||| | ||| |||||| Sbjct: 218 aagaatcaatggattcatggtcaaatccctcc 249
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 254 bits (128), Expect = 2e-64 Identities = 188/208 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 37337 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 37396 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 37397 cattaattgcaacttcattaatcttactgattagtgtacccgttgtatttgcttcttctg 37456 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 37457 atggttggtcaagtaacaaaaatattgtattttctggtacatcattatggattggattag 37516 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||||||| || |||||||| Sbjct: 37517 tctttctggtagctatccttaattctct 37544
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 254 bits (128), Expect = 2e-64 Identities = 194/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| |||||||||||||||||||||||| Sbjct: 37921 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattagctgtttttg 37980 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| || || ||| ||||| ||||| | |||||| |||||||||||||||||| Sbjct: 37981 cattaattgctacgtcatcaatcttattaattggcgtacccgttgtatttgcttctcctg 38040 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 38041 atggttggtcaagtaacaaaaatgttgtattttccggtacatcattatggattggattag 38100 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 38101 tctttctggtgggtatccttaattctctcatctctt 38136
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 35512 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 35571 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 35572 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 35631 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 35632 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 35691 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 35692 tctttctggtgggtatccttaattctctcatctctt 35727
>gb|AY316647.1| Centaurea vallesiaca tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316646.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316645.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316644.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316643.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316642.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316641.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316640.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316639.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1125 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316638.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316637.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316636.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|AY316634.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1125 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 246 bits (124), Expect = 6e-62 Identities = 184/204 (90%) Strand = Plus / Plus Query: 247 ggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaat 306 ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 39462 ggtagcttggaggattacaaccatgactattgctttccaattggctgtttttgcattaat 39521 Query: 307 tgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttg 366 ||| ||||| ||| ||||| | |||||||||||| |||||||||||||||| |||||||| Sbjct: 39522 tgctacttcatcaatcttattgattagtgtacccgttgtatttgcttctcccgatggttg 39581 Query: 367 gtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttct 426 ||||| ||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||| Sbjct: 39582 gtcaagtaagaaaaatgttgtattttccggtacgtcattatggattggattagtatttct 39641 Query: 427 cgtagctattctgaattctctcat 450 |||| |||||| ||||| ||||| Sbjct: 39642 ggtaggtattcttaattcgctcat 39665
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| || ||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 40874 atttgttgatagcttggaggattacaaccatgactattgctttccaattggctgtttttg 40933 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| ||| Sbjct: 40934 cattaattgctacttcatcaatcttactgattagtgtacccgttgtatttgcttcttctg 40993 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 40994 atggttggtcaagtaacaaaaatattgtattttcgggtacatcattatggattggattag 41053 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||| | |||||||| || ||||||||||| |||| Sbjct: 41054 tctttttggtagctatccttaattctctcatctctt 41089
>gb|AY727503.1| Eupatorium rotundifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1112 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 321 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 380 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 381 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 440 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 441 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 500 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 501 tctttctggtgggtatccttaattctctcatctctt 536
>gb|AY727502.1| Eupatorium capillifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1103 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 321 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 380 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 381 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 440 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 441 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 500 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 501 tctttctggtgggtatccttaattctctcatctctt 536
>gb|AY727484.1| Magnolia acuminata PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1055 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 310 atttgttggtagtttggaggattacaagcatgactattgctttccaattggctgtttttg 369 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | |||||||||||| |||||||||||||| | | Sbjct: 370 cattaattgctacttcatcaatcttactgattagtgtacccgttgtatttgcttcttcgg 429 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 430 atggttggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattag 489 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||| | |||||||| || ||||||||||| |||| Sbjct: 490 tctttttggtagctatccttaattctctcatctctt 525 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaacccctcc 179 ||||||||||||||||||| | ||| |||||| Sbjct: 218 aagaatcaatggattcatggtcaaatccctcc 249
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 246 bits (124), Expect = 6e-62 Identities = 193/216 (89%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 35511 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 35570 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 35571 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 35630 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 35631 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 35690 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 35691 tctttctggtgggtatccttaattctctcatctctt 35726
>gb|AY727477.1| Hibiscus mechowii PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1634 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 354 tttgttggtagcttggaggattagaaacatgactattgctttccaattggctgtttttgc 413 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||||| Sbjct: 414 attaattgctacttcgtcaatcttactgattagtgtacccgttgtatttgcttctcctga 473 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| | ||| |||||| ||||||||||||||||||| |||||||||||| |||| Sbjct: 474 tggttggttgagtaacaaaaatattgtattttccggtacatctttatggattggattagt 533 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | ||| || |||||||| ||||||| Sbjct: 534 ttttctagtgggtatccttaattctcttatttctt 568
>gb|AY727475.1| Hibiscus cannabinus PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1515 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 352 tttgttggtagcttggaggattagaaacatgactattgctttccaattggctgtttttgc 411 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||||| Sbjct: 412 attaattgctacttcgtcaatcttactgattagtgtacccgttgtatttgcttctcctga 471 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| | ||| |||||| ||||||||||||||||||| |||||||||||| |||| Sbjct: 472 tggttggttgagtaacaaaaatattgtattttccggtacatctttatggattggattagt 531 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | ||| || |||||||| ||||||| Sbjct: 532 ttttctagtgggtatccttaattctcttatttctt 566
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 244 bits (123), Expect = 2e-61 Identities = 183/203 (90%) Strand = Plus / Minus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 25046 ttggaggattagaaacatgactattgctttccaattagctgtttttgcattaattgctat 24987 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| | | ||| | ||||||||||| ||||||||||||||||||| |||||||| || Sbjct: 24986 ttcatttattttattgattagtgtacctgttgtatttgcttctcctgaaggttggtcgaa 24927 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 ||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| | Sbjct: 24926 taacaaaaatgttgtattttccggtacatcattatggattggattagtgtttctcgtggg 24867 Query: 433 tattctgaattctctcatttctt 455 |||||| |||||||||||||||| Sbjct: 24866 tattcttaattctctcatttctt 24844
>gb|AY727499.1| Trilisa paniculata PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1095 Score = 242 bits (122), Expect = 9e-61 Identities = 188/210 (89%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||| Sbjct: 315 tggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttgcattaa 374 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||||||||| Sbjct: 375 ttgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggtt 434 Query: 366 ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttc 425 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 435 ggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattagtctttc 494 Query: 426 tcgtagctattctgaattctctcatttctt 455 | || | ||| || ||||||||||| |||| Sbjct: 495 tggtgggtatccttaattctctcatctctt 524
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 35572 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 35631 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||| | |||||| |||||||||||||||||| Sbjct: 35632 cattaattgctacttcatcaatcttattgattggcgtacccgttgtatttgcttctcctg 35691 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 35692 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 35751 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 35752 tctttctggtgggtatccttaattctctcatctctt 35787
>gb|AY316635.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 343 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 402 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| | |||||||||||||||| Sbjct: 403 cattaattgctacttcatcaatcttattgattagcgtacccgtagtatttgcttctcctg 462 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 463 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 522 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 523 tctttctggtgggtatccttaattctctcatctctt 558
>gb|DQ384533.1| Panax ginseng clone PG6L-10 Ycf9 mRNA, complete cds Length = 520 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| |||||||||||||||||||||||| Sbjct: 194 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattagctgtttttg 253 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| || || | | ||||| ||||| | |||||| |||||||||||||||||| Sbjct: 254 cattaattgctacgtcattaatcttattaattggcgtacccgttgtatttgcttctcctg 313 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 314 atggttggtcaagtaacaaaaatgttttattttccggtacatcattatggattggattag 373 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 374 tctttctggtgggtatccttaattctctcatctctt 409
>gb|AY727501.1| Eupatorium hyssopifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1102 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 321 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 380 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||| ||||||||||||| Sbjct: 381 cattaattgctacttcatcaatcttattgattagcgtacccgttgtctttgcttctcctg 440 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 441 atggttggtcaagtaacaaaaatgttgtattttcaggtacatcattatggattggattag 500 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 501 tctttctggtgggtatccttaattctctcatctctt 536
>gb|AY727500.1| Carphephorus corymbosus PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1093 Score = 238 bits (120), Expect = 1e-59 Identities = 192/216 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 309 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 368 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| ||| ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 369 cattaattgctacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctg 428 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||| ||| Sbjct: 429 atggttggtcaagtaacaaaaatgttgtgttttcaggtacatcattatggattggattag 488 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 489 tctttctggtgggtatccttaattctctcatctctt 524
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 37706 tttgttggtagcttggaggattagaaacatgactattgctttccaattggctgtttttgc 37765 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| ||| ||||| | ||||||||||| ||||||||||||||||||| Sbjct: 37766 attaattgctacttcgtcaatcttactgattagtgtacctgttgtatttgcttctcctga 37825 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| | ||| |||||| ||||||||||||||||||| |||||||||||| |||| Sbjct: 37826 tggttggttgagtaacaaaaatattgtattttccggtacatctttatggattggattagt 37885 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | ||| || |||||||| ||||||| Sbjct: 37886 ttttctagtgggtatccttaattctcttatttctt 37920
>gb|AC140103.7| Medicago truncatula clone mth2-9i16, complete sequence Length = 96937 Score = 236 bits (119), Expect = 6e-59 Identities = 182/203 (89%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || Sbjct: 60456 ttggaggattagaaacatgactattgcttttcaattagctgtttttgcattaattgttac 60515 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| || | ||| | ||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 60516 ttcatccattttattgattggtgtacctgttgtatttgcttctcctgatggttggtcaag 60575 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || | Sbjct: 60576 taataaaaatgttgtattttccggtacatcattatggattggattagtatttctagtggg 60635 Query: 433 tattctgaattctctcatttctt 455 |||||| ||||||||||| |||| Sbjct: 60636 tattcttaattctctcatctctt 60658
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 29389 tttgttggtagcttggaggattagaagcatgactattgctttccaattggctgtttttgc 29330 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| ||| | ||| | |||||||||||| |||||||||||||||| || Sbjct: 29329 attaattgctacttcatcacttttactgattagtgtacccgttgtatttgcttctcccga 29270 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||||| ||| |||||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 29269 gggttggtcaagtaacaaaaatgttgtattttccggcacatcattgtggattggattagt 29210 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 |||||| || | ||| || ||||||||||| |||| Sbjct: 29209 ctttctggtgggtatccttaattctctcatctctt 29175
>gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9, complete sequence Length = 23359 Score = 236 bits (119), Expect = 6e-59 Identities = 182/203 (89%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| || Sbjct: 19843 ttggaggattagaaacatgactattgcttttcaattagccgtttttgcattaattgctac 19902 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| || | ||| | ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19903 ttcatccattttattgattagtgtacctgttgtatttgcttctcctgatggttggtcaag 19962 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 ||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| || | Sbjct: 19963 taacaaaaatgttgtattttccggtacatcattatggattggattagtatttctagtggg 20022 Query: 433 tattctgaattctctcatttctt 455 |||||| ||||||||||| |||| Sbjct: 20023 tattcttaattctctcatctctt 20045 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 aatcaatggattcatgattaaaccc 175 |||||||||||||||||| |||||| Sbjct: 19724 aatcaatggattcatgataaaaccc 19748
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 236 bits (119), Expect = 6e-59 Identities = 182/203 (89%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| || Sbjct: 99122 ttggaggattagaaacatgactattgcttttcaattagctgtttttgcattaattgttac 99181 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| || | ||| | ||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 99182 ttcatccattttattgattggtgtacctgttgtatttgcttctcctgatggttggtcaag 99241 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| || | Sbjct: 99242 taataaaaatgttgtattttccggtacatcattatggattggattagtatttctagtggg 99301 Query: 433 tattctgaattctctcatttctt 455 |||||| ||||||||||| |||| Sbjct: 99302 tattcttaattctctcatctctt 99324
>gb|AY727483.1| Prunus virginiana PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1197 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 346 tttgttggtagattggaggattagaaacatgactattgctttccaattggctgtttttgc 405 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| | | ||||| | ||||||||||| ||||||||||||||||||| Sbjct: 406 attaattgctacttcattaatcttattgattagtgtacctgttgtatttgcttctcctga 465 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 466 gggttggtcgggtaacaaaaatgttgtattttccggtacatcattatggattggattagt 525 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 |||||| || | ||| || ||||||||||| |||| Sbjct: 526 ctttctggtgggtatccttaattctctcatctctt 560
>gb|AY727482.1| Prunus nigra PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1008 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 315 tttgttggtagattggaggattagaaacatgactattgctttccaattggctgtttttgc 374 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| | | ||||| | ||||||||||| ||||||||||||||||||| Sbjct: 375 attaattgctacttcattaatcttattgattagtgtacctgttgtatttgcttctcctga 434 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 435 gggttggtcgggtaacaaaaatgttgtattttccggtacatcattatggattggattagt 494 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 |||||| || | ||| || ||||||||||| |||| Sbjct: 495 ctttctggtgggtatccttaattctctcatctctt 529
>gb|AY727481.1| Prunus hortulana PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1009 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 316 tttgttggtagattggaggattagaaacatgactattgctttccaattggctgtttttgc 375 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| | | ||||| | ||||||||||| ||||||||||||||||||| Sbjct: 376 attaattgctacttcattaatcttattgattagtgtacctgttgtatttgcttctcctga 435 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 436 gggttggtcgggtaacaaaaatgttgtattttccggtacatcattatggattggattagt 495 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 |||||| || | ||| || ||||||||||| |||| Sbjct: 496 ctttctggtgggtatccttaattctctcatctctt 530
>gb|AY727476.1| Hibiscus macrophyllus PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1532 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 348 tttgttggtaccttggaggattagaaacatgactattgctttccaattggctgtttttgc 407 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||||| Sbjct: 408 attaattgctacttcgtcaatcttactgattagtgtacccgttgtatttgcttctcctga 467 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| | ||| |||||| ||||||||||||||||||| |||||||||||| |||| Sbjct: 468 tggttggttgagtaacaaaaatattgtattttccggtacatctttatggattggattagt 527 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | ||| || |||||||| ||||||| Sbjct: 528 ttttctagtgggtatccttaattctcttatttctt 562
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 236 bits (119), Expect = 6e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 39074 tttgttggtagagtggaggattagaaacatgactattgctttccaattggctgtttttgc 39133 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| | | ||||| | |||||||||||| ||||||||||||||||||| Sbjct: 39134 attaattgctacttcattaatcttactgattagtgtacccgttgtatttgcttctcctga 39193 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 |||||||| | ||| ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 39194 cggttggtcgagtaacaaaaatgttgtattttctggtacatcattatggattggattagt 39253 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 |||||| || | ||| || ||||||||||| |||| Sbjct: 39254 ctttctggtgggtatccttaattctctcatctctt 39288
>gb|DQ069352.1| Ranunculus macranthus photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 234 bits (118), Expect = 2e-58 Identities = 166/182 (91%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||| | Sbjct: 1 atgactattgctttccaattggctgtttttgcattaattgctacttcatcaatcttattg 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| |||||||||||||| |||| |||||||||| ||| |||||| ||||| Sbjct: 61 attagtgtacccgttgtatttgcttcttctgacggttggtcaagtaacaaaaattttgta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||||| |||||||| || ||||||||| Sbjct: 121 ttttccggtacatcattatggattggattagtctttctagtagctatccttaattctctc 180 Query: 449 at 450 || Sbjct: 181 at 182
>gb|AY363054.1| Spiranthes romanzoffiana trnS gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 947 Score = 234 bits (118), Expect = 2e-58 Identities = 181/202 (89%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||| Sbjct: 245 tggtagtttggaggatgacaagcatgactattgctttccaattagctatttttgcattaa 304 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| | | ||||| | |||||||||||| |||||||||||||| |||||| || Sbjct: 305 ttgcaacttcattaatcttattgattagtgtacccgttgtatttgcttcttctgatgatt 364 Query: 366 ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttc 425 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 365 ggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattagtctttc 424 Query: 426 tcgtagctattctgaattctct 447 | |||||||| ||||||||||| Sbjct: 425 tggtagctatcctgaattctct 446
>gb|AF301469.1|AF301469 Spiranthes vernalis tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 476 Score = 230 bits (116), Expect = 3e-57 Identities = 179/200 (89%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||| Sbjct: 277 tggtagtttggaggatgacaagcatgactattgctttccaattagctatttttgcattaa 336 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| | | ||||| | |||||||||||| |||||||||||||| |||||| || Sbjct: 337 ttgcaacttcattaatcttattgattagtgtacccgttgtatttgcttcttctgatgatt 396 Query: 366 ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttc 425 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 397 ggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattagtctttc 456 Query: 426 tcgtagctattctgaattct 445 | |||||||| ||||||||| Sbjct: 457 tggtagctatcctgaattct 476
>gb|AF301468.1|AF301468 Spiranthes romanzoffiana tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 483 Score = 230 bits (116), Expect = 3e-57 Identities = 179/200 (89%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||| Sbjct: 284 tggtagtttggaggatgacaagcatgactattgctttccaattagctatttttgcattaa 343 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| | | ||||| | |||||||||||| |||||||||||||| |||||| || Sbjct: 344 ttgcaacttcattaatcttattgattagtgtacccgttgtatttgcttcttctgatgatt 403 Query: 366 ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttc 425 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 404 ggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattagtctttc 463 Query: 426 tcgtagctattctgaattct 445 | |||||||| ||||||||| Sbjct: 464 tggtagctatcctgaattct 483
>gb|AF301467.1|AF301467 Spiranthes magnicamporum tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 476 Score = 230 bits (116), Expect = 3e-57 Identities = 179/200 (89%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||| Sbjct: 277 tggtagtttggaggatgacaagcatgactattgctttccaattagctatttttgcattaa 336 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| | | ||||| | |||||||||||| |||||||||||||| |||||| || Sbjct: 337 ttgcaacttcattaatcttattgattagtgtacccgttgtatttgcttcttctgatgatt 396 Query: 366 ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttc 425 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 397 ggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattagtctttc 456 Query: 426 tcgtagctattctgaattct 445 | |||||||| ||||||||| Sbjct: 457 tggtagctatcctgaattct 476
>gb|AF301466.1|AF301466 Spiranthes diluvialis tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 483 Score = 230 bits (116), Expect = 3e-57 Identities = 179/200 (89%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||| Sbjct: 284 tggtagtttggaggatgacaagcatgactattgctttccaattagctatttttgcattaa 343 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| | | ||||| | |||||||||||| |||||||||||||| |||||| || Sbjct: 344 ttgcaacttcattaatcttattgattagtgtacccgttgtatttgcttcttctgatgatt 403 Query: 366 ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtctttc 425 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct: 404 ggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattagtctttc 463 Query: 426 tcgtagctattctgaattct 445 | |||||||| ||||||||| Sbjct: 464 tggtagctatcctgaattct 483
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 228 bits (115), Expect = 1e-56 Identities = 184/207 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 37883 tttgttggtagattggaggattagaaacatgactattgctttccaattggctgtttttgc 37942 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||||| ||||| ||| ||||| | |||||||| ||| ||||||||||||||||||| Sbjct: 37943 attaattgttacttcatcaatcttactgattagtgtgcccgttgtatttgcttctcctga 38002 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 38003 tggttggtcgggtaacaaaaatgttgtattttccggtacatcgttatggattggattagt 38062 Query: 421 ctttctcgtagctattctgaattctct 447 |||||| || | ||| || |||||||| Sbjct: 38063 ctttctggtgggtatccttaattctct 38089
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 228 bits (115), Expect = 1e-56 Identities = 184/207 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 37866 tttgttggtagattggaggattagaaacatgactattgctttccaattggctgtttttgc 37925 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||||| ||||| ||| ||||| | |||||||| ||| ||||||||||||||||||| Sbjct: 37926 attaattgttacttcatcaatcttactgattagtgtgcccgttgtatttgcttctcctga 37985 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 37986 tggttggtcgggtaacaaaaatgttgtattttccggtacatcgttatggattggattagt 38045 Query: 421 ctttctcgtagctattctgaattctct 447 |||||| || | ||| || |||||||| Sbjct: 38046 ctttctggtgggtatccttaattctct 38072
>dbj|AB206610.1| Arcterica nana chloroplast DNA, trnS-trnfM intergenic spacer Length = 935 Score = 226 bits (114), Expect = 5e-56 Identities = 183/206 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctctcat 450 || || | ||| || ||||||||||| Sbjct: 531 ctggtgggtatccttaattctctcat 556
>dbj|AB206609.1| Pieris floribunda chloroplast DNA, trnS-trnfM intergenic spacer Length = 936 Score = 226 bits (114), Expect = 5e-56 Identities = 183/206 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctctcat 450 || || | ||| || ||||||||||| Sbjct: 531 ctggtgggtatccttaattctctcat 556
>dbj|AB206608.1| Pieris phillyreifolia chloroplast DNA, trnS-trnfM intergenic spacer Length = 948 Score = 226 bits (114), Expect = 5e-56 Identities = 183/206 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 352 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 411 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 412 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 471 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 472 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 531 Query: 425 ctcgtagctattctgaattctctcat 450 || || | ||| || ||||||||||| Sbjct: 532 ctggtgggtatccttaattctctcat 557
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 37570 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 37629 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 37630 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 37689 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 37690 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 37749 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 37750 tctttctggtgggtatccttaattctctcatctctt 37785 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 37471 agaatcaatggattcatgat 37490
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 37304 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 37363 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 37364 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 37423 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 37424 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 37483 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 37484 tctttctggtgggtatccttaattctctcatctctt 37519
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 36821 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 36880 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 36881 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 36940 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 36941 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 37000 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 37001 tctttctggtgggtatccttaattctctcatctctt 37036 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 36722 agaatcaatggattcatgat 36741
>gb|AY727495.1| Solanum ptychanthum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1115 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 336 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 395 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 396 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 455 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 456 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 515 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 516 tctttctggtgggtatccttaattctctcatctctt 551 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 237 agaatcaatggattcatgat 256
>gb|AY727494.1| Solanum americanum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1114 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 336 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 395 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 396 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 455 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 456 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 515 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 516 tctttctggtgggtatccttaattctctcatctctt 551 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 237 agaatcaatggattcatgat 256
>gb|AY727493.1| Solanum physalifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1115 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 336 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 395 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 396 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 455 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 456 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 515 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 516 tctttctggtgggtatccttaattctctcatctctt 551 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 237 agaatcaatggattcatgat 256
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 36702 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 36761 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 36762 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 36821 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 36822 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 36881 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 36882 tctttctggtgggtatccttaattctctcatctctt 36917 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 36603 agaatcaatggattcatgat 36622
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 37567 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 37626 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 37627 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 37686 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 37687 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 37746 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 37747 tctttctggtgggtatccttaattctctcatctctt 37782 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 37468 agaatcaatggattcatgat 37487
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 37496 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 37555 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 37556 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 37615 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 37616 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 37675 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 37676 tctttctggtgggtatccttaattctctcatctctt 37711 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 37397 agaatcaatggattcatgat 37416
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 36825 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 36884 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 36885 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 36944 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 36945 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 37004 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 37005 tctttctggtgggtatccttaattctctcatctctt 37040 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 36726 agaatcaatggattcatgat 36745
>emb|AJ427520.1|ENA427520 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 25 Length = 1113 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 373 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 432 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 433 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 492 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 493 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 552 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 553 tctttctagtaggtatccttaattctct 580
>emb|AJ427519.1|ENA427519 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 24 Length = 1118 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 378 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 437 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 438 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 497 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 498 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 557 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 558 tctttctagtaggtatccttaattctct 585
>emb|AJ427518.1|ENA427518 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 06 Length = 1112 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 373 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 432 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 433 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 492 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 493 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 552 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 553 tctttctagtaggtatccttaattctct 580
>emb|AJ427517.1|ENA427517 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 05 Length = 1112 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 373 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 432 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 433 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 492 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 493 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 552 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 553 tctttctagtaggtatccttaattctct 580
>emb|AJ427516.1|ENA427516 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 04 Length = 1117 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 378 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 437 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 438 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 497 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 498 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 557 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 558 tctttctagtaggtatccttaattctct 585
>emb|AJ427515.1|ENA427515 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 03 Length = 1117 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 378 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 437 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 438 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 497 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 498 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 557 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 558 tctttctagtaggtatccttaattctct 585
>emb|AJ427514.1|ENA427514 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 02 Length = 1114 Score = 222 bits (112), Expect = 9e-55 Identities = 184/208 (88%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| ||||||| |||||||||| || |||||| ||||||||||||| || ||||||| Sbjct: 373 atttgttggtagcgtggaggattaaaagcatgactcttgctttccaattggccgtttttg 432 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 433 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 492 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 493 atggttggtcaagtaataaaaatgttgtattttccggtacatcattatgggttggtttag 552 Query: 420 tctttctcgtagctattctgaattctct 447 ||||||| |||| ||| || |||||||| Sbjct: 553 tctttctagtaggtatccttaattctct 580
>emb|AJ312393.1|CTR312393 Chloroplast transformation vector pRB95 Length = 7626 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 5466 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 5525 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 5526 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 5585 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 5586 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 5645 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 5646 tctttctggtgggtatccttaattctctcatctctt 5681 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 5367 agaatcaatggattcatgat 5386
>emb|AJ312392.1|CTR312392 Chloroplast transformation vector pRB94 Length = 7626 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 5466 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 5525 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 5526 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 5585 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 5586 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 5645 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 5646 tctttctggtgggtatccttaattctctcatctctt 5681 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 5367 agaatcaatggattcatgat 5386
>emb|AJ312391.1|CTR312391 Chloroplast transformation vector pRB70 Length = 7454 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 5533 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 5592 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 5593 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 5652 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 5653 atggctggtcaagtaacaaaaatgttgtattttctggtacatccttatggattggattag 5712 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 5713 tctttctggtgggtatccttaattctctcatctctt 5748 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 5434 agaatcaatggattcatgat 5453
>dbj|AB206605.1| Pieris taiwanensis chloroplast DNA, trnS-trnfM intergenic spacer Length = 939 Score = 220 bits (111), Expect = 3e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>dbj|AB206604.1| Pieris koidzumiana chloroplast DNA, trnS-trnfM intergenic spacer, country:Japan:Okinawa, Okinawa Island Length = 940 Score = 220 bits (111), Expect = 3e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>dbj|AB206603.1| Pieris koidzumiana chloroplast DNA, trnS-trnfM intergenic spacer, country:Japan:Kagoshima, Amamioshima Island Length = 939 Score = 220 bits (111), Expect = 3e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>dbj|AB206602.1| Pieris japonica var. yakushimensis chloroplast DNA, trnS-trnfM intergenic spacer Length = 939 Score = 220 bits (111), Expect = 3e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>dbj|AB206601.1| Pieris japonica chloroplast DNA, trnS-trnfM intergenic spacer Length = 939 Score = 220 bits (111), Expect = 3e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatgttgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>gb|AY727498.1| Gratiola brevifolia PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1069 Score = 220 bits (111), Expect = 3e-54 Identities = 192/219 (87%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||| |||||||||||| || |||||| ||| ||||||||| ||||||| Sbjct: 285 tttatttgttggtatcttggaggattaaaagaatgactcttgttttccaattggctgttt 344 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | ||||| ||||| | ||||||||||||| Sbjct: 345 ttgcattaattgctacttcatcaatcttattgattagcgtacctgtcgtatttgcttctc 404 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 405 ctgatggttggtcaagtaacaaaaatgttgtattttccggtacatcattgtggattgggt 464 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||| ||| || ||||||||||| |||| Sbjct: 465 tagtctttctggtaggtatccttaattctctcatctctt 503
>gb|AY727497.1| Gratiola neglecta PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1052 Score = 220 bits (111), Expect = 3e-54 Identities = 192/219 (87%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||| |||||||||||| || |||||| ||| ||||||||| ||||||| Sbjct: 289 tttatttgttggtatcttggaggattaaaagaatgactcttgttttccaattggctgttt 348 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | ||||| ||||| | ||||||||||||| Sbjct: 349 ttgcattaattgctacttcatcaatcttattgattagcgtacctgtcgtatttgcttctc 408 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 409 ctgatggttggtcaagtaacaaaaatgttgtattttccggtacatcattgtggattgggt 468 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||| ||| || ||||||||||| |||| Sbjct: 469 tagtctttctggtaggtatccttaattctctcatctctt 507
>gb|AY727496.1| Gratiola virginiana PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1054 Score = 220 bits (111), Expect = 3e-54 Identities = 192/219 (87%) Strand = Plus / Plus Query: 237 tttatttgatggtagcttggaggattagaaatatgactattgctttccaattagctgttt 296 |||||||| ||||| |||||||||||| || |||||| ||| ||||||||| ||||||| Sbjct: 285 tttatttgttggtatcttggaggattaaaagaatgactcttgttttccaattggctgttt 344 Query: 297 ttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctc 356 ||||||||||||| ||||| ||| ||||| | ||||| ||||| | ||||||||||||| Sbjct: 345 ttgcattaattgctacttcatcaatcttattgattagcgtacctgtcgtatttgcttctc 404 Query: 357 ctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggac 416 ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 405 ctgatggttggtcaagtaacaaaaatgttgtattttccggtacatcattgtggattgggt 464 Query: 417 tagtctttctcgtagctattctgaattctctcatttctt 455 |||||||||| |||| ||| || ||||||||||| |||| Sbjct: 465 tagtctttctggtaggtatccttaattctctcatctctt 503
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 220 bits (111), Expect = 3e-54 Identities = 180/203 (88%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||| || |||||||||||||| ||||| ||| ||||||||||||||||||| Sbjct: 36426 ttggaggattacaagcatgactattgcttttcaattggctatttttgcattaattgcgac 36485 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| || ||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 36486 ttcatcgatcttattgattagtgtacccgttgtatttgcttctcctgatggttggtcaag 36545 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 ||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||| Sbjct: 36546 taacaaaaatgttgtattttccggtacctcattatggattgggttagtctttctggtagg 36605 Query: 433 tattctgaattctctcatttctt 455 ||| || ||||| ||||| |||| Sbjct: 36606 tatccttaattcgctcatctctt 36628
>gb|DQ069351.1| Nuphar advena photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 218 bits (110), Expect = 1e-53 Identities = 164/182 (90%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||||| | Sbjct: 1 atgactattgctttccaattggctgtttttgcattaattgctacttcatcaatcttattg 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| |||||||||||||||| || |||||||||| ||||||||||||| || Sbjct: 61 attagtgtacccgttgtatttgcttctcccgagggttggtcaagtaataaaaatgtttta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||| ||||||||||||||| |||| ||||| |||| |||||| ||||| ||| Sbjct: 121 ttttccggtacgtcattatggattggattagtatttctggtaggtattcttaattcgctc 180 Query: 449 at 450 || Sbjct: 181 at 182
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 218 bits (110), Expect = 1e-53 Identities = 176/198 (88%) Strand = Plus / Minus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || Sbjct: 25362 ttggaggattagaaagatgactatcgctttccaattagctgtttttgcattaattgctac 25303 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| || | ||| | ||||||||||| |||||||||||||||||||||||||||| | Sbjct: 25302 ttcatccattttattgattagtgtacctgttgtatttgcttctcctgatggttggtcgag 25243 Query: 373 taataaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagc 432 ||||||||||||||||||||| ||||||||||||||||||| | |||| || || || | Sbjct: 25242 taataaaaatgttgtattttctggtacatcattatggattgcattagtattcctagtggg 25183 Query: 433 tattctgaattctctcat 450 |||||| ||||||||||| Sbjct: 25182 tattcttaattctctcat 25165
>gb|AF301465.1|AF301465 Spiranthes cernua tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 502 Score = 216 bits (109), Expect = 5e-53 Identities = 179/201 (89%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||| ||||||||| | || |||||||||||||||||||||||| |||||||||||| Sbjct: 302 tggtagtttggaggatgacaagcatgactattgctttccaattagctatttttgcattaa 361 Query: 306 ttgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggtt 365 |||| ||||| | | ||||| | |||||||||||| |||||||||||||| |||||| || Sbjct: 362 ttgcaacttcattaatcttattgattagtgtacccgttgtatttgcttcttctgatgatt 421 Query: 366 -ggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 |||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 422 gggtcaagtaacaaaaatgttgtattttctggtacatcattatggattggattagtcttt 481 Query: 425 ctcgtagctattctgaattct 445 || |||||||| ||||||||| Sbjct: 482 ctggtagctatcctgaattct 502
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 214 bits (108), Expect = 2e-52 Identities = 189/216 (87%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||||||||||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 36677 atttgttggtagcttggaggattaaaagcatgactcttgctttccaattggctgtttttg 36736 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctg 359 |||||||||| ||||| | | ||||| | ||||| |||||| |||||||||||||||||| Sbjct: 36737 cattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcctg 36796 Query: 360 atggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactag 419 |||| ||||||| ||| ||||||||||||||||| ||||| || |||||||||||| ||| Sbjct: 36797 atggctggtcaagtaacaaaaatgttgtattttctggtacctccttatggattggattag 36856 Query: 420 tctttctcgtagctattctgaattctctcatttctt 455 ||||||| || | ||| || ||||||||||| |||| Sbjct: 36857 tctttctggtgggtatccttaattctctcatctctt 36892 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 36578 agaatcaatggattcatgat 36597
>gb|AY757813.1| Acorus gramineus LhbA (lhbA) mRNA, complete cds; chloroplast Length = 189 Score = 212 bits (107), Expect = 8e-52 Identities = 167/187 (89%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||| ||||| ||| |||||||||||||||||||||| || ||||| | Sbjct: 1 atgactattgcttttcaattggctatttttgcattaattgcgacttcatcgatcttattg 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 61 attagtgtacccgttgtatttgcttctcctgatggttggtcaagtaacaaaaatgttgta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||| |||||||||||||| |||||||||| |||| ||| || ||||| ||| Sbjct: 121 ttttccggtacctcattatggattgggttagtctttctggtaggtatccttaattcgctc 180 Query: 449 atttctt 455 || |||| Sbjct: 181 atctctt 187
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 212 bits (107), Expect = 8e-52 Identities = 182/207 (87%) Strand = Plus / Plus Query: 249 tagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattg 308 ||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 34624 tagcttggaggattatacgtatgactatagctttccaattggctgtttttgcattaattg 34683 Query: 309 cgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggt 368 | ||||| ||| ||||| | ||||| |||||| |||||||||||||||| || ||||||| Sbjct: 34684 ccacttcatcaatcttactgattagcgtacccgttgtatttgcttctcccgacggttggt 34743 Query: 369 caaataataaaaatgttgtattttccggtacatcattatggattggactagtctttctcg 428 ||| ||| |||||| |||||||||||||||||||||||||| ||||| |||||||||| | Sbjct: 34744 caagtaacaaaaatattgtattttccggtacatcattatggcttggattagtctttctgg 34803 Query: 429 tagctattctgaattctctcatttctt 455 | | ||| || ||||||||||| |||| Sbjct: 34804 tgggtatccttaattctctcatctctt 34830
>dbj|AB206607.1| Pieris formosa chloroplast DNA, trnS-trnfM intergenic spacer Length = 942 Score = 212 bits (107), Expect = 8e-52 Identities = 179/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| ||||||| |||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatggtgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>dbj|AB206606.1| Pieris formosa var. forrestii chloroplast DNA, trnS-trnfM intergenic spacer Length = 938 Score = 212 bits (107), Expect = 8e-52 Identities = 179/203 (88%) Strand = Plus / Plus Query: 245 atggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcatta 304 ||||||||||||||||| | || |||||||||||||||||| | ||||||||||||||| Sbjct: 351 atggtagcttggaggataaaaagaatgactattgctttccaactggctgtttttgcatta 410 Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 |||| |||||| ||| ||||| | ||||| |||||| ||||||||||||||||||||||| Sbjct: 411 attgtgacttcatcaatcttattgattagcgtacccgttgtatttgcttctcctgatggt 470 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||||| ||| ||||||| |||||||||||||||||| |||||||||||| |||| ||| Sbjct: 471 tggtcaagtaagaaaaatggtgtattttccggtacatccttatggattggattagttttt 530 Query: 425 ctcgtagctattctgaattctct 447 || || | ||| || |||||||| Sbjct: 531 ctggtgggtatccttaattctct 553
>gb|DQ069349.1| Acorus americanus photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 210 bits (106), Expect = 3e-51 Identities = 163/182 (89%) Strand = Plus / Plus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||| ||||| ||| |||||||||||||||||||||| || ||||| | Sbjct: 1 atgactattgcttttcaattggctatttttgcattaattgcgacttcatcgatcttattg 60 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 61 attagtgtacccgttgtatttgcttctcctgatggttggtcaagtaacaaaaatgttgta 120 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||| |||||||||||||| |||||||||| |||| ||| || ||||| ||| Sbjct: 121 ttttccggtacctcattatggattgggttagtctttctggtaggtatccttaattcgctc 180 Query: 449 at 450 || Sbjct: 181 at 182
>gb|M27309.1|PEACPD2 Pisum sativum D2 photosystem II protein and 44 kd photosystem II protein genes, complete cds; tRNA-Ser gene, complete sequence; and unknown gene; chloroplast genes for chloroplast products Length = 4078 Score = 206 bits (104), Expect = 5e-50 Identities = 176/200 (88%) Strand = Plus / Plus Query: 256 gaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgacttc 315 ||||||| ||| ||||||||||| || ||||||||||||||||||||||||| ||||| Sbjct: 3554 gaggattctaaacatgactattgcgtttcaattagctgtttttgcattaattgttacttc 3613 Query: 316 ctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaataa 375 || | ||| ||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 3614 atccattttattaattagtgtacctgttgtatttgcttctcctgatggttggtcaagtaa 3673 Query: 376 taaaaatgttgtattttccggtacatcattatggattggactagtctttctcgtagctat 435 ||||||||||| ||||| ||||||||||||||||||||| |||| ||||| || | ||| Sbjct: 3674 caaaaatgttgtcttttctggtacatcattatggattggattagtatttctagtgggtat 3733 Query: 436 tctgaattctctcatttctt 455 ||||||||||||||| |||| Sbjct: 3734 tctgaattctctcatctctt 3753 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 151 aatcaatggattcatgattaaaccc 175 |||||||||||||||||| |||||| Sbjct: 3437 aatcaatggattcatgataaaaccc 3461
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 200 bits (101), Expect = 3e-48 Identities = 189/217 (87%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaat-atgactattgctttccaattagctgttttt 298 ||||| |||||||||||||||||| || |||||| ||||||||||||| ||||||||| Sbjct: 36680 atttgttggtagcttggaggattaaaagccatgactcttgctttccaattggctgttttt 36739 Query: 299 gcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcct 358 ||||||||||| ||||| | | ||||| | ||||| |||||| ||||||||||||||||| Sbjct: 36740 gcattaattgctacttcattaatcttattgattagcgtacccgttgtatttgcttctcct 36799 Query: 359 gatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggacta 418 ||||| ||||||| ||| ||||||||||||||||| ||||| || |||||||||||| || Sbjct: 36800 gatggctggtcaagtaacaaaaatgttgtattttctggtacctccttatggattggatta 36859 Query: 419 gtctttctcgtagctattctgaattctctcatttctt 455 |||||||| || | ||| || ||||||||||| |||| Sbjct: 36860 gtctttctggtgggtatccttaattctctcatctctt 36896 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 agaatcaatggattcatgat 168 |||||||||||||||||||| Sbjct: 36581 agaatcaatggattcatgat 36600
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 196 bits (99), Expect = 5e-47 Identities = 156/175 (89%) Strand = Plus / Plus Query: 249 tagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattg 308 ||||||||||||||| ||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 35731 tagcttggaggattaaaaacatgactattgctttccaattggcagtttttgcattaatta 35790 Query: 309 cgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggt 368 ||||| ||| ||||| | |||||||||||| |||||||||| |||||||||||||||| Sbjct: 35791 ttacttcatcaatcttactgattagtgtacccgttgtatttgcgtctcctgatggttggt 35850 Query: 369 caaataataaaaatgttgtattttccggtacatcattatggattggactagtctt 423 | | ||| ||||||||||||||||| |||||||| |||||||||||| ||||||| Sbjct: 35851 cgagtaacaaaaatgttgtattttctggtacatctttatggattggattagtctt 35905
>gb|AY727489.1| Minuartia glabra PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1047 Score = 190 bits (96), Expect = 3e-45 Identities = 159/180 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 268 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 327 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 328 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctccaga 387 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 388 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatggattggattagt 447
>gb|AY727487.1| Minuartia cumberlandensis PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1038 Score = 190 bits (96), Expect = 3e-45 Identities = 159/180 (88%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 268 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 327 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 328 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctccaga 387 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 388 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatggattggattagt 447
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 249 tagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattg 308 ||||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 34913 tagcttggaggattaaaaacatgactattgcttttcaattggctgtttttgcattaatta 34972 Query: 309 cgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggt 368 ||||| ||| ||||| | |||||||||||| |||||||||| ||||||||||| |||| Sbjct: 34973 ttacttcatcaatcttactgattagtgtacccgttgtatttgcgtctcctgatgggtggt 35032 Query: 369 caaataataaaaatgttgtattttccggtacatcattatggattggactagtctt 423 | | ||| ||||||||||||||||| |||||||| |||||||||||| ||||||| Sbjct: 35033 cgagtaacaaaaatgttgtattttctggtacatctttatggattggattagtctt 35087
>emb|AM085629.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB19 Length = 1050 Score = 188 bits (95), Expect = 1e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 327 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 386 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 387 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctcccga 446 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||| ||||| |||| Sbjct: 447 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatgggttggattagt 506 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | || || |||||||| ||||||| Sbjct: 507 ttttctggtggggatccttaattctcttatttctt 541
>emb|AM085628.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB18 Length = 1050 Score = 188 bits (95), Expect = 1e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 327 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 386 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 387 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctcccga 446 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||| ||||| |||| Sbjct: 447 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatgggttggattagt 506 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | || || |||||||| ||||||| Sbjct: 507 ttttctggtggggatccttaattctcttatttctt 541
>emb|AM085627.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB17 Length = 911 Score = 188 bits (95), Expect = 1e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 327 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 386 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 387 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctcccga 446 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||| ||||| |||| Sbjct: 447 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatgggttggattagt 506 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | || || |||||||| ||||||| Sbjct: 507 ttttctggtggggatccttaattctcttatttctt 541
>emb|AM085626.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB11 Length = 1050 Score = 188 bits (95), Expect = 1e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 327 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 386 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 387 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctcccga 446 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||| ||||| |||| Sbjct: 447 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatgggttggattagt 506 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | || || |||||||| ||||||| Sbjct: 507 ttttctggtggggatccttaattctcttatttctt 541
>emb|AM085625.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB1 Length = 1050 Score = 188 bits (95), Expect = 1e-44 Identities = 185/215 (86%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||||||||||||||||| || ||||||||| ||||||||||| ||||||||||| Sbjct: 327 tttgttggtagcttggaggattataagtatgactatagctttccaattggctgtttttgc 386 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 |||||| || ||||| ||| ||||| | ||||| |||||| | |||||||||||||| || Sbjct: 387 attaatcgctacttcatcaatcttactgattagcgtacccgtcgtatttgcttctcccga 446 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 ||||||||||| ||| |||||| | ||||||||||||||||||||||| ||||| |||| Sbjct: 447 tggttggtcaagtaacaaaaatttcttattttccggtacatcattatgggttggattagt 506 Query: 421 ctttctcgtagctattctgaattctctcatttctt 455 ||||| || | || || |||||||| ||||||| Sbjct: 507 ttttctggtggggatccttaattctcttatttctt 541
>gb|AY293379.1| Juglans australis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 186 bits (94), Expect = 5e-44 Identities = 130/142 (91%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggttggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293372.1| Juglans microcarpa chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 186 bits (94), Expect = 5e-44 Identities = 130/142 (91%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggttggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293365.1| Juglans ailanthifolia chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 186 bits (94), Expect = 5e-44 Identities = 130/142 (91%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||||||||| | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggttggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY754811.1| Carica papaya RAPD-SCAR marker sequence Length = 614 Score = 180 bits (91), Expect = 3e-42 Identities = 187/219 (85%) Strand = Plus / Minus Query: 241 tttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgc 300 |||| |||| ||||||||||||||||| |||||||||||||||||||| ||| |||||| Sbjct: 355 tttgttggttgcttggaggattagaaacatgactattgctttccaattggctagttttgc 296 Query: 301 attaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctga 360 ||||||||| ||||| | | ||||| | |||||||||||| ||||||||||||||||||| Sbjct: 295 attaattgctacttcataaatcttactgattagtgtacccattgtatttgcttctcctga 236 Query: 361 tggttggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagt 420 || |||||| | ||| | |||| |||||||||| |||||||||||||| || || ||| Sbjct: 235 tgattggtcgagtaacagaaatattgtattttctagtacatcattatgggttagattagg 176 Query: 421 ctttctcgtagctattctgaattctctcatttcttaaat 459 |||| | || | ||| || ||||||||||| |||||||| Sbjct: 175 ctttttggtgggtatccttaattctctcatctcttaaat 137
>gb|AY293377.1| Juglans californica chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 180 bits (91), Expect = 3e-42 Identities = 129/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293375.1| Juglans mollis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 180 bits (91), Expect = 3e-42 Identities = 129/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293373.1| Juglans hindsii chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 180 bits (91), Expect = 3e-42 Identities = 129/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293376.1| Juglans cinerea chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 174 bits (88), Expect = 2e-40 Identities = 128/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||| | | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntggncgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293371.1| Juglans hopeiensis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 174 bits (88), Expect = 2e-40 Identities = 128/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | ||||||| |||| |||||||||||||||||||||||||||| | Sbjct: 478 ttcatcaatcttactgattagtgnacccgttgtatttgcttctcctgatggttggtcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||| ||||||| Sbjct: 538 taacaaaaatgttgnattttcc 559
>gb|AY293370.1| Juglans sigillata chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 174 bits (88), Expect = 2e-40 Identities = 128/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||| | | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntggncgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293374.1| Juglans guatemalensis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 172 bits (87), Expect = 7e-40 Identities = 128/142 (90%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||| | | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntgggcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293364.1| Juglans mandshurica chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 168 bits (85), Expect = 1e-38 Identities = 127/142 (89%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | ||||||| |||| |||||||||||||||||||||| ||| | | Sbjct: 478 ttcatcaatcttactgattagtgnacccgttgtatttgcttctcctgatggntggncgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 538 taacaaaaatgttgtattttcc 559
>gb|AY293378.1| Juglans major chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 165 bits (83), Expect = 2e-37 Identities = 128/142 (90%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||| ||| |||||||||||||||||||||| ||||| | Sbjct: 478 ttcatcaatcttactgattagtgt-cccgttgtatttgcttctcctgatggntggtcgag 536 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 537 taacaaaaatgttgtattttcc 558
>gb|AY293368.1| Juglans neotropica chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 165 bits (83), Expect = 2e-37 Identities = 128/142 (90%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||| ||| |||||||||||||||||||||| ||||| | Sbjct: 478 ttcatcaatcttactgattagtgt-cccgttgtatttgcttctcctgatggntggtcgag 536 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 537 taacaaaaatgttgtattttcc 558
>gb|AY293367.1| Juglans cathayensis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 165 bits (83), Expect = 2e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 257 aggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgacttcc 316 ||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 422 aggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctacttca 481 Query: 317 tcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaataat 376 ||| ||||| | |||||||||||| |||||||||||||||||||||| ||| | | ||| Sbjct: 482 tcaatcttactgattagtgtacccgttgtatttgcttctcctgatggntgggcgagtaac 541 Query: 377 aaaaatgttgtattttcc 394 |||||||||||||||||| Sbjct: 542 aaaaatgttgtattttcc 559
>gb|AY525366.1| Fagus grandifolia Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 690 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Plus Query: 305 attgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggt 364 ||||| ||||| ||| ||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 1 attgctacttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatggt 60 Query: 365 tggtcaaataataaaaatgttgtattttccggtacatcattatggattggactagtcttt 424 ||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 61 tggtcgaataacaaaaatgttgtattttctggtacatcattatggattggattagtcttt 120 Query: 425 ctcgtagctattctgaattctctcatttctt 455 | || | ||| || ||||||||||| |||| Sbjct: 121 ttggtgggtatccttaattctctcatctctt 151
>gb|AY525365.1| Quercus falcata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 834 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525364.1| Castanea crenata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 848 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525363.1| Castanea crenata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 848 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525362.1| Castanea henryi Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 799 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525361.1| Castanea henryi Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 799 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525360.1| Castanea seguinii haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 798 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525359.1| Castanea seguinii haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 833 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525358.1| Castanea seguinii haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 798 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525357.1| Castanea seguinii haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 833 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525356.1| Castanea mollissima haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 798 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525355.1| Castanea mollissima haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 812 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525354.1| Castanea mollissima haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 812 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525353.1| Castanea mollissima haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 812 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525352.1| Castanea sativa Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 806 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525351.1| Castanea sativa Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 806 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525350.1| Castanea pumila var. ozarkensis Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 841 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525349.1| Castanea pumila var. ozarkensis Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 841 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525348.1| Castanea pumila var. pumila haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 820 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525347.1| Castanea pumila var. pumila haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 837 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525346.1| Castanea dentata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 820 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY525345.1| Castanea dentata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 820 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 25 attagtgtacctgttgtatttgcttctcctgatggttggtcaaataacaaaaatgttgta 84 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||||||||||||||||||||||||| |||||||| | || | ||| || ||||||||| Sbjct: 85 ttttccggtacatcattatggattggattagtctttttggtgggtatccttaattctctc 144 Query: 449 atttctt 455 || |||| Sbjct: 145 atctctt 151
>gb|AY293369.1| Juglans regia chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| |||||||||||||||||||||| ||| | | Sbjct: 478 ttcatcaatcttactgattagtgtacccgttgtatttgcttctcctgatgggtgggcgag 537 Query: 373 taataaaaatgttgtattttcc 394 ||| ||||||| |||||||||| Sbjct: 538 taacaaaaatggtgtattttcc 559
>gb|AY293366.1| Juglans nigra chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 159 bits (80), Expect = 1e-35 Identities = 127/142 (89%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 418 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 477 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | ||||||||| ||| || |||||||||||||||||| ||||| | Sbjct: 478 ttcatcaatcttactgattagtgta-cccgtgnatttgcttctcctgatggntggtcgag 536 Query: 373 taataaaaatgttgtattttcc 394 ||| |||||||||||||||||| Sbjct: 537 taacaaaaatgttgtattttcc 558
>gb|AY727488.1| Minuartia uniflora PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1018 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%), Gaps = 5/220 (2%) Strand = Plus / Plus Query: 241 tttgatggtagcttggaggattaga-----aatatgactattgctttccaattagctgtt 295 |||| |||||||||||||||||||| | ||||||||| ||||||||||| |||||| Sbjct: 274 tttgttggtagcttggaggattagattataagtatgactatagctttccaattggctgtt 333 Query: 296 tttgcattaattgcgacttcctcagtcttagtaattagtgtaccccttgtatttgcttct 355 || |||||||| || ||||| ||| ||||| | ||||| ||||| | |||||||||||| Sbjct: 334 ttggcattaatcgctacttcatcaatcttactgattagcgtacctgtcgtatttgcttct 393 Query: 356 cctgatggttggtcaaataataaaaatgttgtattttccggtacatcattatggattgga 415 || ||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 394 ccagatggttggtcaagtaacaaaaatttcttattttccggtacatcattatggattgga 453 Query: 416 ctagtctttctcgtagctattctgaattctctcatttctt 455 |||| ||||| || | || || |||||||| ||||||| Sbjct: 454 ttagtttttctggtggggatccttaattctcttatttctt 493
>gb|AY522542.1| Citrullus rehmii isolate NAM1887 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522541.1| Citrullus rehmii isolate NAM1303 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522540.1| Citrullus lanatus var. lanatus isolate AUProducer Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 574 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522539.1| Citrullus lanatus var. lanatus isolate PI494529 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522538.1| Citrullus lanatus var. lanatus isolate PI179881 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522537.1| Citrullus lanatus var. citroides isolate NAM1884 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522536.1| Citrullus lanatus var. citroides isolate NAM1612 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522535.1| Citrullus lanatus var. citroides isolate PI431727 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522534.1| Citrullus lanatus var. citroides isolate PI271769 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522533.1| Citrullus ecirrhosus isolate NAM956 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 580 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522532.1| Citrullus ecirrhosus isolate NAM47 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 578 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 13 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 72 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 73 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 131
>gb|AY522531.1| Citrullus colocynthis isolate PI637255 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522530.1| Citrullus colocynthis isolate PI549161 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522529.1| Citrullus colocynthis isolate PI537277 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522528.1| Citrullus colocynthis isolate PI269365 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522527.1| Citrullus colocynthis isolate PI195927 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY522526.1| Citrullus colocynthis isolate TCN955 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 2e-30 Identities = 107/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||||| |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattggattagtctttctggtgggtatccttaattctct 132
>gb|AY293380.1| Juglans olanchana chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 137 bits (69), Expect = 4e-29 Identities = 121/140 (86%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 417 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 476 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatggttggtcaaa 372 ||| ||| ||||| | |||||||||||| || |||||||||| |||||||| || | | Sbjct: 477 ttcatcaatcttactgattagtgtacccgntgnatttgcttctnctgatggtgggncgag 536 Query: 373 taataaaaatgttgtatttt 392 ||| ||||||| || ||||| Sbjct: 537 taacaaaaatggtgnatttt 556
>dbj|AB116593.1| Cycas panzhihuaensis chloroplast DNA, intergenic spacer region, partial sequence Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Minus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||| || || |||||||||||||| | ||| | || |||| Sbjct: 353 atgactattgctttccaattggccgtgtttgcattaattgctatttcattcctcctagtg 294 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||| ||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||| || Sbjct: 293 attggtgtacctgtcgtacttgcctctcctgatggttggtcaagtaacaaaaatgttata 234 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||| || ||||||||||||||||| |||||||| | |||| ||| || |||||| || Sbjct: 233 ttttcgggcgcatcattatggattggattagtctttttggtaggtatccttaattctttc 174 Query: 449 atttcttaaatt 460 || ||||||||| Sbjct: 173 atatcttaaatt 162
>dbj|AB116592.1| Cycas taitungensis chloroplast DNA, intergenic spacer region, partial sequence Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Minus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||| || || |||||||||||||| | ||| | || |||| Sbjct: 353 atgactattgctttccaattggccgtgtttgcattaattgctatttcattcctcctagtg 294 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||| ||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||| || Sbjct: 293 attggtgtacctgtcgtacttgcctctcctgatggttggtcaagtaacaaaaatgttata 234 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||| || ||||||||||||||||| |||||||| | |||| ||| || |||||| || Sbjct: 233 ttttcgggcgcatcattatggattggattagtctttttggtaggtatccttaattctttc 174 Query: 449 atttcttaaatt 460 || ||||||||| Sbjct: 173 atatcttaaatt 162
>dbj|AB101678.2| Cycas revoluta chloroplast gene for tRNA-Ser, intergenic spacer region, north type Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Minus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||| || || |||||||||||||| | ||| | || |||| Sbjct: 353 atgactattgctttccaattggccgtgtttgcattaattgctatttcattcctcctagtg 294 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||| ||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||| || Sbjct: 293 attggtgtacctgtcgtacttgcctctcctgatggttggtcaagtaacaaaaatgttcta 234 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||| || ||||||||||||||||| |||||||| | |||| ||| || |||||| || Sbjct: 233 ttttcgggcgcatcattatggattggattagtctttttggtaggtatccttaattctttc 174 Query: 449 atttcttaaatt 460 || ||||||||| Sbjct: 173 atatcttaaatt 162
>dbj|AB100596.2| Cycas revoluta chloroplast gene for tRNA-Ser, intergenic spacer region, south type Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Minus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 |||||||||||||||||||| || || |||||||||||||| | ||| | || |||| Sbjct: 353 atgactattgctttccaattggccgtgtttgcattaattgctatttcattcctcctagtg 294 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||| ||||||| | ||| |||| ||||||||||||||||||| ||| ||||||||| || Sbjct: 293 attggtgtacctgtcgtacttgcctctcctgatggttggtcaagtaacaaaaatgttata 234 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||| || ||||||||||||||||| |||||||| | |||| ||| || |||||| || Sbjct: 233 ttttcgggcgcatcattatggattggattagtctttttggtaggtatccttaattctttc 174 Query: 449 atttcttaaatt 460 || ||||||||| Sbjct: 173 atatcttaaatt 162
>gb|AY522525.1| Praecitrullus fistulosus isolate PI540917 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 686 Score = 133 bits (67), Expect = 6e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 |||||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 14 attagtgtgcccgttgtatttgcttctcctgatggttggtcgggtaacaaaaatgttgta 73 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctct 447 ||||||||||||||||||||||||| | |||||||||| || | ||| || |||||||| Sbjct: 74 ttttccggtacatcattatggattgcattagtctttctggtgggtatccttaattctct 132
>gb|AY337664.1| Pandanus princeps isolate Sp_22 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 496 Score = 131 bits (66), Expect = 2e-27 Identities = 84/90 (93%) Strand = Plus / Plus Query: 246 tggtagcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaa 305 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 338 tggtagcttggaggattacaaacatgactattgctttccaattagctgtttttgcattaa 397 Query: 306 ttgcgacttcctcagtcttagtaattagtg 335 |||||||||| ||| ||||| | ||||||| Sbjct: 398 ttgcgacttcatcaatcttactgattagtg 427 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaa 172 |||||||||| |||||||||||||| Sbjct: 260 aagaatcaattgattcatgattaaa 284
>gb|AY293381.1| Pterocarya stenoptera chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 571 Score = 123 bits (62), Expect = 6e-25 Identities = 98/111 (88%) Strand = Plus / Plus Query: 253 ttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgcgac 312 ||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 429 ttggaggattagaaacatgactattgctttccaattggctgtttttgcgttaattgctac 488 Query: 313 ttcctcagtcttagtaattagtgtaccccttgtatttgcttctcctgatgg 363 ||| ||| ||||| | ||||||| |||| || |||||||||| ||||||| Sbjct: 489 ttcatcaatcttactgattagtgnacccggtgnatttgcttctnctgatgg 539
>gb|AY337661.1| Cyclanthus bipartitus isolate Sp_19 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 484 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 250 agcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgc 309 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 agcttggaggattacaaacatgactattgctttccaattagctgtttttgcattaattgc 392 Query: 310 gacttcctcagtcttagtaattagtg 335 |||||| ||| ||||| | ||||||| Sbjct: 393 gacttcatcaatcttactgattagtg 418
>gb|AY337653.1| Pandanus palustris isolate Sp_11 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 498 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 250 agcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgc 309 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 agcttggaggattacaaacatgactattgctttccaattagctgtttttgcattaattgc 401 Query: 310 gacttcctcagtcttagtaattagtg 335 |||||| ||| ||||| | ||||||| Sbjct: 402 gacttcatcaatcttactgattagtg 427 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaa 172 |||||||||| |||||||||||||| Sbjct: 259 aagaatcaattgattcatgattaaa 283
>gb|AY337650.1| Pandanus maximus isolate Sp_8 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 497 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 250 agcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgc 309 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 agcttggaggattacaaacatgactattgctttccaattagctgtttttgcattaattgc 402 Query: 310 gacttcctcagtcttagtaattagtg 335 |||||| ||| ||||| | ||||||| Sbjct: 403 gacttcatcaatcttactgattagtg 428 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaa 172 |||||||||| |||||||||||||| Sbjct: 260 aagaatcaattgattcatgattaaa 284
>gb|AY337644.1| Pandanus eydouxia isolate Sp_2 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 496 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 250 agcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgc 309 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 agcttggaggattacaaacatgactattgctttccaattagctgtttttgcattaattgc 401 Query: 310 gacttcctcagtcttagtaattagtg 335 |||||| ||| ||||| | ||||||| Sbjct: 402 gacttcatcaatcttactgattagtg 427 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaa 172 |||||||||| |||||||||||||| Sbjct: 259 aagaatcaattgattcatgattaaa 283
>gb|AY337643.1| Pandanus microcarpus isolate Sp_1 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 499 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 250 agcttggaggattagaaatatgactattgctttccaattagctgtttttgcattaattgc 309 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 agcttggaggattacaaacatgactattgctttccaattagctgtttttgcattaattgc 402 Query: 310 gacttcctcagtcttagtaattagtg 335 |||||| ||| ||||| | ||||||| Sbjct: 403 gacttcatcaatcttactgattagtg 428 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 aagaatcaatggattcatgattaaa 172 |||||||||| |||||||||||||| Sbjct: 260 aagaatcaattgattcatgattaaa 284
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 123 bits (62), Expect = 6e-25 Identities = 158/190 (83%) Strand = Plus / Minus Query: 269 atgactattgctttccaattagctgtttttgcattaattgcgacttcctcagtcttagta 328 ||||||||||||||||| || ||||| |||||||||||||| | ||| | | |||||| Sbjct: 41634 atgactattgctttccagttcgctgtgtttgcattaattgctatttcatttcttttagta 41575 Query: 329 attagtgtaccccttgtatttgcttctcctgatggttggtcaaataataaaaatgttgta 388 ||| ||||||| |||| |||| ||||||||||||||||||| || ||||||||||||| Sbjct: 41574 attggtgtacctgttgtgcttgcctctcctgatggttggtcaagtagtaaaaatgttgta 41515 Query: 389 ttttccggtacatcattatggattggactagtctttctcgtagctattctgaattctctc 448 ||||| ||| | ||||||||| ||||| |||| ||| | || | | |||| |||||| || Sbjct: 41514 ttttcaggtgcttcattatgggttggattagtttttttggttggtgttcttaattctttc 41455 Query: 449 atttcttaaa 458 || ||||||| Sbjct: 41454 atatcttaaa 41445
>gb|AY642484.1| Cypripedium parviflorum var. parviflorum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 809 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 240 atttgatggtagcttggaggattagaaatatgactattgctttccaattagctgtttttg 299 ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 289 atttgttggtagtttggaggattacaaacatgactattgctttccaattagctgtttttg 348 Query: 300 cattaattgcgacttcctcagtcttagtaattagtgtaccc 340 |||||||||| ||||| | | ||||| | |||||||||||| Sbjct: 349 cattaattgcaacttcattaatcttactgattagtgtaccc 389 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 411 ttggactagtctttctcgtagctattctgaattctctcatttctt 455 ||||| |||||||||| |||||||| |||||||||||||| |||| Sbjct: 391 ttggattagtctttctggtagctatcctgaattctctcatctctt 435 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,428,404 Number of Sequences: 3902068 Number of extensions: 7428404 Number of successful extensions: 173018 Number of sequences better than 10.0: 372 Number of HSP's better than 10.0 without gapping: 378 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 171116 Number of HSP's gapped (non-prelim): 1818 length of query: 500 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 478 effective length of database: 17,147,199,772 effective search space: 8196361491016 effective search space used: 8196361491016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
