>GGA3_MOUSE (Q8BMI3) ADP-ribosylation factor-binding protein GGA3|
           (Golgi-localized, gamma ear-containing, ARF-binding
           protein 3)
          Length = 718

 Score = 31.6 bits (70), Expect = 0.58
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 44  ALPFTSINRNPVKEPLN----CPPGRSARLIFAVSSDLASTPPRPAASGFLGAKIPAS 205
           ALP T+ ++N  +   +    CPPGR   L+  VS  + +T P P  S  L A +P S
Sbjct: 591 ALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVS--MLNTAPLPVKSIVLQAAVPKS 646

>GGA3_HUMAN (Q9NZ52) ADP-ribosylation factor-binding protein GGA3|
           (Golgi-localized, gamma ear-containing, ARF-binding
           protein 3)
          Length = 723

 Score = 31.6 bits (70), Expect = 0.58
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = +2

Query: 44  ALPFTSINRNPVKEPLN----CPPGRSARLIFAVSSDLASTPPRPAASGFLGAKIPAS 205
           ALP T+ ++N  +   +    CPPGR   L+  VS  + +T P P  S  L A +P S
Sbjct: 596 ALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVS--MLNTAPLPVKSIVLQAAVPKS 651

>MYO15_MOUSE (Q9QZZ4) Myosin-15 (Myosin XV) (Unconventional myosin-15)|
          Length = 3511

 Score = 31.2 bits (69), Expect = 0.75
 Identities = 22/62 (35%), Positives = 25/62 (40%)
 Frame = +2

Query: 26  HHTTGXALPFTSINRNPVKEPLNCPPGRSARLIFAVSSDLASTPPRPAASGFLGAKIPAS 205
           H   G   P  S+ R P + P   PP R   L  A S   AS    P  S  LG+  P S
Sbjct: 780 HSPLGPLSPQLSLRRGPFQPPFPPPPRRPQSLREAFSLRRASGRLGPPRSPVLGSPRPPS 839

Query: 206 DP 211
            P
Sbjct: 840 PP 841

>ZN533_MOUSE (Q8BXJ8) Zinc finger protein 533|
          Length = 482

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
 Frame = +2

Query: 50  PFTSINRNP------------VKEPLNCPPGRSARLIFAVSSDLASTPPRPAASGFLGAK 193
           P+  + R+P            + +PL  P   S+ L  A  S   S PPRP+AS F  A 
Sbjct: 399 PYNKLQRSPSILAAKLAFQKDLMKPL-APTFLSSPLAAAAVSSALSLPPRPSASLFQAAA 457

Query: 194 IPASDPRP 217
           IP +  RP
Sbjct: 458 IPPALLRP 465

>HCN4_MOUSE (O70507) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Brain cyclic nucleotide gated
            channel 3) (BCNG-3)
          Length = 1186

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +2

Query: 47   LPFTSINRNPVKEP--LNCPPGRSARLIFAVSSDLASTPPRPAASGFLGAKIPASDP 211
            LP    +R+P   P  L  PPG  +  + A  S    TPPRP    F+      + P
Sbjct: 945  LPPPPSSRSPSSSPGQLGQPPGELSLGLAAGPSSTPETPPRPERPSFMAGASGGASP 1001

>MBN_DROME (P52302) Protein lethal(3)malignant blood neoplasm 1 (Mbn(83))|
          Length = 653

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 225 IPEGLGSEAGILAPRNPEAAGRGG-VEARSEETAKISLADLPGGQLRGSLTG 73
           +P   G  A   AP NP+A G GG + A +    K+S   +  G   G ++G
Sbjct: 422 VPSNGGGIAAGKAPGNPQAGGSGGIIGAGAPGGRKVSAGGIGSGSAIGGVSG 473

>DEC1_DROER (Q23933) Defective chorion-1 protein precursor (Fragments)|
          Length = 557

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +2

Query: 131 VSSDLASTPPRPAASGFLGAKIPASDPRPS 220
           V S LA  PP PA    LGA  P   P P+
Sbjct: 159 VGSFLAQLPPMPAIPSILGAAAPVPAPAPA 188

>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)|
            (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related
            peptide); Proxenin]
          Length = 1224

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = -1

Query: 219  EGLGSEAGILAPRNPEAAGRGGVEARSEETAKISLADLPGGQLRGSLTGFRLIDVKGRAX 40
            EGLG +A     +  E  G   VE   E   ++   D+P G   G+  GF +   KG + 
Sbjct: 863  EGLGDDA---LGKGQEEGGGWDVEEDLELPPEL---DIPPGAAGGAEDGFFVPPTKGTSP 916

Query: 39   PVVWC 25
              +WC
Sbjct: 917  TQIWC 921

>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 155 PPRPAASGFLGAKIPASDPRPSG 223
           PP PAA+   GA  PAS P P+G
Sbjct: 46  PPGPAAASGPGAAGPASSPPPAG 68

>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor|
          Length = 1759

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = +2

Query: 65  NRNPVKEPLNCPPGRSA-----RLIFAVSSDLASTPPRPAASGFLGAKIPASDPRPSGI 226
           N NP +  L+ PPG        R      S  +  P  P  SG+ G K    DP P G+
Sbjct: 147 NGNPGRPGLSGPPGEGGVNSQGRKGVKGESGRSGVPGLPGNSGYPGLKGAKGDPGPYGL 205

>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1431

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +2

Query: 101 PGRSARLIFAVSSDLASTPPRPAASGFLGAKIPASDPRPSG 223
           PG   R++ A  S   + P  P   G +G   P+  P P+G
Sbjct: 805 PGAPGRVMTAEGSSTITVPGPPGPPGAMGPPGPSGTPGPAG 845

>CUPC4_CANPG (P81583) Cuticle protein CP1499 (CPCP1499)|
          Length = 148

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = +2

Query: 113 ARLIFAVSSDLASTPPRPAAS----GFLGAKIPASDPRPS 220
           AR   A  + L +TPP+PA      G L +KIPA  P  S
Sbjct: 13  ARFFLAYQAALPATPPKPADPPKWYGPLASKIPAGLPGSS 52

>ZN326_PONPY (Q5RCA4) Zinc finger protein 326|
          Length = 579

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -1

Query: 216 GLGSEAGILAPRNPEAAGRGGVEARSEETAKISLADLP 103
           G G E G++     E  G G VE   EETAK   AD P
Sbjct: 539 GEGGEVGVVG----EVEGVGKVEEVEEETAKEEPADFP 572

>Y264_METEX (Q8GEK8) UPF0264 protein ORF22|
          Length = 236

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 101 PGRSARLIFAVSSDLASTPPRPAASGFLGAKI 196
           PGR   ++FA        P R AA+GF+GA I
Sbjct: 113 PGRVIGVLFAEDDVAEDGPARLAAAGFVGAMI 144

>EFG_SYNPX (Q7U4D2) Elongation factor G (EF-G)|
          Length = 690

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -1

Query: 225 IPEG-LGSEAGILAPRNPEAAGRGGVEARSEETAKISLADLPG 100
           +PE  LGS  G L+ R  +  G+G  +  S+ +AK+ LA++ G
Sbjct: 608 VPEDFLGSIIGDLSSRRGQVEGQGVEDGTSKISAKVPLAEMFG 650


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,743,895
Number of Sequences: 219361
Number of extensions: 415309
Number of successful extensions: 1812
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1809
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)